1092
10000
1 16378000 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.986;LDAF=0.0688;AVGPOST=0.9972;RSQ=0.9862;ERATE=0.0003;THETA=0.0006;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 16378047 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0054;AVGPOST=0.9998;RSQ=0.9582;ERATE=0.0020;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 16378070 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0016;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16378093 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0932;AVGPOST=0.9997;RSQ=0.9984;ERATE=0.0004;THETA=0.0011;AC=203;AN=2184 GT:DS:GL:BD 0.09294872 0
1 16378099 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.0662;AVGPOST=0.9966;RSQ=0.9824;ERATE=0.0008;THETA=0.0022;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 16378213 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16378215 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0948;AVGPOST=0.9996;RSQ=0.9988;ERATE=0.0003;THETA=0.0019;AC=206;AN=2184 GT:DS:GL:BD 0.09432235 0
1 16378296 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.950;LDAF=0.0102;AVGPOST=0.9984;RSQ=0.9387;ERATE=0.0033;THETA=0.0055;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 16378331 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.975;LDAF=0.0830;AVGPOST=0.9962;RSQ=0.9818;ERATE=0.0003;THETA=0.0005;AC=181;AN=2184 GT:DS:GL:BD 0.08287546 0
1 16378339 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.983;LDAF=0.0831;AVGPOST=0.9957;RSQ=0.9804;ERATE=0.0003;THETA=0.0002;AC=181;AN=2184 GT:DS:GL:BD 0.08287546 0
1 16378340 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0040;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16378355 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16378356 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16378431 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.0935;AVGPOST=0.9982;RSQ=0.9928;ERATE=0.0004;THETA=0.0009;AC=202;AN=2184 GT:DS:GL:BD 0.09249084 0
1 16378490 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0062;AVGPOST=0.9993;RSQ=0.9568;ERATE=0.0004;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 16378495 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0951;AVGPOST=0.9975;RSQ=0.9894;ERATE=0.0005;THETA=0.0007;AC=206;AN=2184 GT:DS:GL:BD 0.09432235 0
1 16378499 rs55751847 C CTCCTG 5274 PASS INDEL;BAVGPOST=0.968;BRSQ=0.819;LDAF=0.0871;AVGPOST=0.9755;RSQ=0.8930;ERATE=0.0016;THETA=0.0007;AC=195;AN=2184 GT:DS:GL:BD 0.08928572 0
1 16378649 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1591;AVGPOST=0.9964;RSQ=0.9906;ERATE=0.0004;THETA=0.0010;AC=348;AN=2184 GT:DS:GL:BD 0.15934066 0
1 16378687 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9673;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16378725 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0948;AVGPOST=0.9996;RSQ=0.9985;ERATE=0.0003;THETA=0.0009;AC=206;AN=2184 GT:DS:GL:BD 0.09432235 0
1 16378739 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0231;AVGPOST=0.9994;RSQ=0.9900;ERATE=0.0003;THETA=0.0010;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 16378811 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0099;AVGPOST=0.9994;RSQ=0.9704;ERATE=0.0003;THETA=0.0060;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 16378853 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16378854 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0121;AVGPOST=0.9982;RSQ=0.9476;ERATE=0.0010;THETA=0.0026;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 16378873 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8689;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16378897 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7417;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16378931 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.955;LDAF=0.0875;AVGPOST=0.9952;RSQ=0.9794;ERATE=0.0004;THETA=0.0056;AC=192;AN=2184 GT:DS:GL:BD 0.08791209 0
1 16378945 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.0899;AVGPOST=0.9982;RSQ=0.9921;ERATE=0.0003;THETA=0.0007;AC=197;AN=2184 GT:DS:GL:BD 0.09020147 0
1 16378951 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0898;AVGPOST=0.9973;RSQ=0.9898;ERATE=0.0003;THETA=0.0008;AC=196;AN=2184 GT:DS:GL:BD 0.08974359 0
1 16378954 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.986;LDAF=0.0711;AVGPOST=0.9976;RSQ=0.9875;ERATE=0.0003;THETA=0.0012;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 16378956 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0017;AVGPOST=0.9997;RSQ=0.9499;ERATE=0.0003;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16378957 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0018;AVGPOST=0.9997;RSQ=0.9471;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16378980 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0968;AVGPOST=0.9977;RSQ=0.9916;ERATE=0.0022;THETA=0.0009;AC=210;AN=2184 GT:DS:GL:BD 0.09615385 0
1 16378991 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0942;AVGPOST=0.9977;RSQ=0.9922;ERATE=0.0003;THETA=0.0021;AC=205;AN=2184 GT:DS:GL:BD 0.09386447 0
1 16378992 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0031;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16378996 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16378998 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.0951;AVGPOST=0.9981;RSQ=0.9932;ERATE=0.0003;THETA=0.0012;AC=207;AN=2184 GT:DS:GL:BD 0.09478022 0
1 16379006 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0232;AVGPOST=0.9996;RSQ=0.9947;ERATE=0.0003;THETA=0.0005;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 16379008 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.7923;AVGPOST=0.9990;RSQ=0.9980;ERATE=0.0003;THETA=0.0023;AC=1731;AN=2184 GT:DS:GL:BD 0.79258239 1
1 16379015 . G GGGGGCTGGGA 21762 PASS INDEL;BAVGPOST=0.953;BRSQ=0.857;LDAF=0.1467;AVGPOST=0.9470;RSQ=0.8517;ERATE=0.0021;THETA=0.0017;AC=321;AN=2184 GT:DS:GL:BD 0.14697802 0
1 16379016 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0232;AVGPOST=0.9996;RSQ=0.9947;ERATE=0.0003;THETA=0.0057;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 16379052 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0791;AVGPOST=0.9991;RSQ=0.9948;ERATE=0.0003;THETA=0.0010;AC=172;AN=2184 GT:DS:GL:BD 0.07875458 0
1 16379095 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7803;ERATE=0.0004;THETA=0.0034;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16379135 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0243;AVGPOST=0.9972;RSQ=0.9541;ERATE=0.0003;THETA=0.0070;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 16379163 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0077;AVGPOST=0.9991;RSQ=0.9608;ERATE=0.0004;THETA=0.0052;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 16379173 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0969;AVGPOST=0.9977;RSQ=0.9902;ERATE=0.0005;THETA=0.0045;AC=211;AN=2184 GT:DS:GL:BD 0.09661172 0
1 16379228 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.0971;AVGPOST=0.9971;RSQ=0.9876;ERATE=0.0005;THETA=0.0246;AC=211;AN=2184 GT:DS:GL:BD 0.09661172 0
1 16379416 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1060;AVGPOST=0.9948;RSQ=0.9820;ERATE=0.0005;THETA=0.0019;AC=232;AN=2184 GT:DS:GL:BD 0.10622711 0
1 16379418 . AAC A 125 PASS INDEL;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5038;ERATE=0.0005;THETA=0.0189;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16379567 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.884;LDAF=0.0265;AVGPOST=0.9964;RSQ=0.9484;ERATE=0.0006;THETA=0.0130;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 16379689 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6525;ERATE=0.0004;THETA=0.0042;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16379701 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4897;ERATE=0.0005;THETA=0.0283;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16379813 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.877;LDAF=0.0069;AVGPOST=0.9977;RSQ=0.8790;ERATE=0.0003;THETA=0.0147;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 16379823 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.967;LDAF=0.0843;AVGPOST=0.9922;RSQ=0.9646;ERATE=0.0005;THETA=0.0074;AC=182;AN=2184 GT:DS:GL:BD 0.08333334 0
1 16379852 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.845;LDAF=0.0048;AVGPOST=0.9988;RSQ=0.9055;ERATE=0.0003;THETA=0.0093;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16379969 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.616;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6444;ERATE=0.0004;THETA=0.0104;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16379974 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0004;THETA=0.0085;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16380011 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0024;AVGPOST=0.9991;RSQ=0.8799;ERATE=0.0003;THETA=0.0168;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16380033 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0124;AVGPOST=0.9979;RSQ=0.9388;ERATE=0.0004;THETA=0.0088;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 16380040 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7756;ERATE=0.0003;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16380044 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0201;AVGPOST=0.9991;RSQ=0.9836;ERATE=0.0004;THETA=0.0087;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 16380107 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16380134 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0077;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16380196 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.953;LDAF=0.8288;AVGPOST=0.9761;RSQ=0.9544;ERATE=0.0086;THETA=0.0016;AC=1821;AN=2184 GT:DS:GL:BD 0.83379120 1
1 16380200 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0004;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16380236 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16380240 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8617;ERATE=0.0005;THETA=0.0050;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16380243 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.994;LDAF=0.7028;AVGPOST=0.9952;RSQ=0.9925;ERATE=0.0006;THETA=0.0110;AC=1537;AN=2184 GT:DS:GL:BD 0.70375460 1
1 16380252 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.6414;AVGPOST=0.9968;RSQ=0.9956;ERATE=0.0003;THETA=0.0082;AC=1401;AN=2184 GT:DS:GL:BD 0.64148355 1
1 16380337 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.986;LDAF=0.0961;AVGPOST=0.9968;RSQ=0.9864;ERATE=0.0003;THETA=0.0033;AC=209;AN=2184 GT:DS:GL:BD 0.09569597 0
1 16380393 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.934;LDAF=0.1025;AVGPOST=0.9913;RSQ=0.9657;ERATE=0.0007;THETA=0.0118;AC=224;AN=2184 GT:DS:GL:BD 0.10256410 0
1 16380403 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.986;LDAF=0.5712;AVGPOST=0.9936;RSQ=0.9908;ERATE=0.0009;THETA=0.0004;AC=1246;AN=2184 GT:DS:GL:BD 0.57051283 1
1 16380412 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5835;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16380471 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0094;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16380488 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.990;LDAF=0.5721;AVGPOST=0.9925;RSQ=0.9903;ERATE=0.0008;THETA=0.0019;AC=1245;AN=2184 GT:DS:GL:BD 0.57005495 1
1 16380510 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.810;LDAF=0.0025;AVGPOST=0.9967;RSQ=0.4826;ERATE=0.0003;THETA=0.0055;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16380538 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.719;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6834;ERATE=0.0005;THETA=0.0040;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16380552 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0040;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16380560 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4886;AVGPOST=0.9950;RSQ=0.9939;ERATE=0.0008;THETA=0.0006;AC=1066;AN=2184 GT:DS:GL:BD 0.48809522 0
1 16380582 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4761;AVGPOST=0.9952;RSQ=0.9943;ERATE=0.0003;THETA=0.0030;AC=1040;AN=2184 GT:DS:GL:BD 0.47619048 0
1 16380634 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.1812;AVGPOST=0.9956;RSQ=0.9898;ERATE=0.0006;THETA=0.0068;AC=394;AN=2184 GT:DS:GL:BD 0.18040293 0
1 16380776 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0254;AVGPOST=0.9990;RSQ=0.9854;ERATE=0.0003;THETA=0.0018;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 16380797 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0027;AVGPOST=0.9997;RSQ=0.9548;ERATE=0.0003;THETA=0.0036;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16380815 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2584;AVGPOST=0.9974;RSQ=0.9949;ERATE=0.0004;THETA=0.0013;AC=565;AN=2184 GT:DS:GL:BD 0.25869963 0
1 16380817 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7608;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16380869 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4981;AVGPOST=0.9934;RSQ=0.9920;ERATE=0.0007;THETA=0.0004;AC=1088;AN=2184 GT:DS:GL:BD 0.49816850 0
1 16380907 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.832;LDAF=0.0061;AVGPOST=0.9964;RSQ=0.7393;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16380940 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5170;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16380978 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0202;AVGPOST=0.9996;RSQ=0.9919;ERATE=0.0003;THETA=0.0025;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 16381006 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.792;LDAF=0.0030;AVGPOST=0.9986;RSQ=0.7981;ERATE=0.0005;THETA=0.0019;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16381120 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.864;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8866;ERATE=0.0006;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16381175 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16381199 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0165;AVGPOST=0.9999;RSQ=0.9973;ERATE=0.0003;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 16381208 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.4927;AVGPOST=0.9974;RSQ=0.9967;ERATE=0.0003;THETA=0.0012;AC=1076;AN=2184 GT:DS:GL:BD 0.49267399 0
1 16381220 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.4923;AVGPOST=0.9976;RSQ=0.9971;ERATE=0.0004;THETA=0.0005;AC=1076;AN=2184 GT:DS:GL:BD 0.49267399 0
1 16381242 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16381262 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0115;AVGPOST=0.9998;RSQ=0.9925;ERATE=0.0003;THETA=0.0013;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 16381337 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6129;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16381578 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9280;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16381579 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4571;AVGPOST=0.9983;RSQ=0.9979;ERATE=0.0007;THETA=0.0008;AC=998;AN=2184 GT:DS:GL:BD 0.45695969 0
1 16381623 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4916;AVGPOST=0.9984;RSQ=0.9978;ERATE=0.0005;THETA=0.0018;AC=1072;AN=2184 GT:DS:GL:BD 0.49084249 0
1 16381718 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7391;AVGPOST=0.9982;RSQ=0.9964;ERATE=0.0003;THETA=0.0004;AC=1615;AN=2184 GT:DS:GL:BD 0.73946887 1
1 16381722 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4766;AVGPOST=0.9992;RSQ=0.9988;ERATE=0.0004;THETA=0.0005;AC=1040;AN=2184 GT:DS:GL:BD 0.47619048 0
1 16381792 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4922;AVGPOST=0.9997;RSQ=0.9996;ERATE=0.0003;THETA=0.0006;AC=1074;AN=2184 GT:DS:GL:BD 0.49175823 0
1 16381816 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4922;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1074;AN=2184 GT:DS:GL:BD 0.49175823 0
1 16381899 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0027;AVGPOST=0.9998;RSQ=0.9676;ERATE=0.0007;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16381943 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16381970 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16382073 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0085;AVGPOST=0.9995;RSQ=0.9754;ERATE=0.0003;THETA=0.0009;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 16382086 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4917;AVGPOST=0.9993;RSQ=0.9991;ERATE=0.0007;THETA=0.0024;AC=1073;AN=2184 GT:DS:GL:BD 0.49130037 0
1 16382201 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0165;AVGPOST=0.9989;RSQ=0.9770;ERATE=0.0003;THETA=0.0011;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 16382245 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16382259 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16382370 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0205;AVGPOST=0.9999;RSQ=0.9973;ERATE=0.0003;THETA=0.0005;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 16382424 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0043;AVGPOST=0.9994;RSQ=0.9308;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16382505 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4569;AVGPOST=0.9973;RSQ=0.9967;ERATE=0.0006;THETA=0.0039;AC=997;AN=2184 GT:DS:GL:BD 0.45650184 0
1 16382545 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7608;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16382546 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0165;AVGPOST=0.9996;RSQ=0.9893;ERATE=0.0003;THETA=0.0036;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 16382584 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4890;AVGPOST=0.9974;RSQ=0.9965;ERATE=0.0005;THETA=0.0010;AC=1067;AN=2184 GT:DS:GL:BD 0.48855311 0
1 16382602 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.7505;AVGPOST=0.9988;RSQ=0.9973;ERATE=0.0004;THETA=0.0016;AC=1640;AN=2184 GT:DS:GL:BD 0.75091577 1
1 16382611 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0318;AVGPOST=0.9987;RSQ=0.9844;ERATE=0.0004;THETA=0.0007;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 16382622 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0028;AVGPOST=0.9997;RSQ=0.9473;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16382649 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4804;AVGPOST=0.9977;RSQ=0.9969;ERATE=0.0004;THETA=0.0035;AC=1048;AN=2184 GT:DS:GL:BD 0.47985348 0
1 16382678 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0154;AVGPOST=0.9947;RSQ=0.8541;ERATE=0.0004;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 16382681 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9569;ERATE=0.0003;THETA=0.0024;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16382718 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.5011;AVGPOST=0.9964;RSQ=0.9953;ERATE=0.0005;THETA=0.0004;AC=1092;AN=2184 GT:DS:GL:BD 0.50000000 0
1 16382730 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.4878;AVGPOST=0.9968;RSQ=0.9958;ERATE=0.0005;THETA=0.0041;AC=1063;AN=2184 GT:DS:GL:BD 0.48672161 0
1 16382791 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4885;AVGPOST=0.9991;RSQ=0.9988;ERATE=0.0003;THETA=0.0046;AC=1066;AN=2184 GT:DS:GL:BD 0.48809522 0
1 16382877 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.981;LDAF=0.7758;AVGPOST=0.9934;RSQ=0.9863;ERATE=0.0003;THETA=0.0011;AC=1696;AN=2184 GT:DS:GL:BD 0.77655679 1
1 16382880 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.983;LDAF=0.2585;AVGPOST=0.9926;RSQ=0.9877;ERATE=0.0008;THETA=0.0003;AC=567;AN=2184 GT:DS:GL:BD 0.25961539 0
1 16382887 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9717;ERATE=0.0005;THETA=0.0015;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16382911 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0084;AVGPOST=0.9995;RSQ=0.9767;ERATE=0.0006;THETA=0.0023;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 16382917 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16382927 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16382951 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0032;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0019;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16382958 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0037;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16382964 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16382966 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0125;AVGPOST=0.9996;RSQ=0.9843;ERATE=0.0004;THETA=0.0019;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 16383016 . CG C 742 PASS INDEL;BAVGPOST=0.989;BRSQ=0.869;LDAF=0.0390;AVGPOST=0.9772;RSQ=0.7779;ERATE=0.0011;THETA=0.0012;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 16383023 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0004;THETA=0.0045;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16383032 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16383037 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0153;AVGPOST=0.9992;RSQ=0.9816;ERATE=0.0003;THETA=0.0016;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 16383084 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0150;AVGPOST=0.9989;RSQ=0.9746;ERATE=0.0003;THETA=0.0006;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 16383112 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.863;LDAF=0.0062;AVGPOST=0.9968;RSQ=0.7850;ERATE=0.0012;THETA=0.0050;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16383141 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6952;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16383260 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0192;AVGPOST=0.9990;RSQ=0.9815;ERATE=0.0003;THETA=0.0007;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 16383267 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2323;AVGPOST=0.9982;RSQ=0.9965;ERATE=0.0003;THETA=0.0008;AC=507;AN=2184 GT:DS:GL:BD 0.23214285 0
1 16383336 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.955;BRSQ=0.929;LDAF=0.6126;AVGPOST=0.9516;RSQ=0.9337;ERATE=0.0141;THETA=0.0016;AC=1353;AN=2184 GT:DS:GL:BD 0.61950547 1
1 16383348 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.925;LDAF=0.1927;AVGPOST=0.9755;RSQ=0.9473;ERATE=0.0008;THETA=0.0011;AC=426;AN=2184 GT:DS:GL:BD 0.19505495 0
1 16383415 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9873;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16383448 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.921;BRSQ=0.757;LDAF=0.7975;AVGPOST=0.9106;RSQ=0.7836;ERATE=0.0268;THETA=0.0066;AC=1775;AN=2184 GT:DS:GL:BD 0.81272894 1
1 16383515 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.2307;AVGPOST=0.9958;RSQ=0.9917;ERATE=0.0005;THETA=0.0015;AC=508;AN=2184 GT:DS:GL:BD 0.23260073 0
1 16383592 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.748;LDAF=0.0066;AVGPOST=0.9951;RSQ=0.6785;ERATE=0.0011;THETA=0.0029;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16383668 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9932;AVGPOST=0.9920;RSQ=0.5193;ERATE=0.0009;THETA=0.0008;AC=2174;AN=2184 GT:DS:GL:BD 0.99542123 1
1 16383736 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8621;ERATE=0.0003;THETA=0.0098;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16383808 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.955;BRSQ=0.841;LDAF=0.1471;AVGPOST=0.9523;RSQ=0.8728;ERATE=0.0047;THETA=0.0061;AC=317;AN=2184 GT:DS:GL:BD 0.14514652 0
1 16383867 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.3737;ERATE=0.0005;THETA=0.0047;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16383879 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.882;LDAF=0.0395;AVGPOST=0.9921;RSQ=0.9140;ERATE=0.0004;THETA=0.0023;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 16383912 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.875;LDAF=0.0398;AVGPOST=0.9930;RSQ=0.9237;ERATE=0.0005;THETA=0.0004;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 16383914 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.900;BRSQ=0.777;LDAF=0.3316;AVGPOST=0.9035;RSQ=0.8017;ERATE=0.0085;THETA=0.0119;AC=731;AN=2184 GT:DS:GL:BD 0.33470696 0
1 16383917 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.919;LDAF=0.0103;AVGPOST=0.9966;RSQ=0.8658;ERATE=0.0003;THETA=0.0128;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 16383974 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.970;LDAF=0.1433;AVGPOST=0.9922;RSQ=0.9738;ERATE=0.0006;THETA=0.0131;AC=312;AN=2184 GT:DS:GL:BD 0.14285715 0
1 16384056 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.965;BRSQ=0.921;LDAF=0.5998;AVGPOST=0.9502;RSQ=0.9127;ERATE=0.0242;THETA=0.0052;AC=1295;AN=2184 GT:DS:GL:BD 0.59294873 1
1 16384333 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.809;LDAF=0.0227;AVGPOST=0.9905;RSQ=0.8410;ERATE=0.0010;THETA=0.0051;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 16384352 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5493;ERATE=0.0004;THETA=0.0067;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16384353 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.960;BRSQ=0.900;LDAF=0.7260;AVGPOST=0.9335;RSQ=0.8571;ERATE=0.0129;THETA=0.0094;AC=1602;AN=2184 GT:DS:GL:BD 0.73351645 1
1 16384381 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.830;LDAF=0.0150;AVGPOST=0.9916;RSQ=0.7804;ERATE=0.0010;THETA=0.0015;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 16384656 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.916;LDAF=0.9081;AVGPOST=0.9721;RSQ=0.8702;ERATE=0.0011;THETA=0.0094;AC=2002;AN=2184 GT:DS:GL:BD 0.91666669 1
1 16384784 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.932;BRSQ=0.814;LDAF=0.7535;AVGPOST=0.9073;RSQ=0.7791;ERATE=0.0084;THETA=0.0009;AC=1662;AN=2184 GT:DS:GL:BD 0.76098901 1
1 16384801 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.940;BRSQ=0.876;LDAF=0.6115;AVGPOST=0.9266;RSQ=0.8776;ERATE=0.0017;THETA=0.0054;AC=1321;AN=2184 GT:DS:GL:BD 0.60485345 1
1 16384843 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.962;BRSQ=0.820;LDAF=0.1164;AVGPOST=0.9692;RSQ=0.8826;ERATE=0.0021;THETA=0.0172;AC=254;AN=2184 GT:DS:GL:BD 0.11630037 0
1 16384868 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.894;BRSQ=0.655;LDAF=0.3749;AVGPOST=0.8769;RSQ=0.6431;ERATE=0.0159;THETA=0.0033;AC=787;AN=2184 GT:DS:GL:BD 0.36034799 0
1 16384986 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.912;BRSQ=0.726;LDAF=0.3068;AVGPOST=0.9208;RSQ=0.7930;ERATE=0.0011;THETA=0.0015;AC=637;AN=2184 GT:DS:GL:BD 0.29166666 0
1 16384998 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.913;BRSQ=0.729;LDAF=0.3000;AVGPOST=0.9252;RSQ=0.8057;ERATE=0.0005;THETA=0.0008;AC=628;AN=2184 GT:DS:GL:BD 0.28754580 0
1 16384999 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.913;BRSQ=0.729;LDAF=0.3005;AVGPOST=0.9238;RSQ=0.8024;ERATE=0.0007;THETA=0.0016;AC=632;AN=2184 GT:DS:GL:BD 0.28937730 0
1 16385042 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.850;BRSQ=0.570;LDAF=0.3700;AVGPOST=0.8683;RSQ=0.6755;ERATE=0.0050;THETA=0.0050;AC=778;AN=2184 GT:DS:GL:BD 0.35622710 0
1 16385130 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.781;LDAF=0.0139;AVGPOST=0.9945;RSQ=0.8533;ERATE=0.0007;THETA=0.0096;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 16385131 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.934;LDAF=0.1668;AVGPOST=0.9830;RSQ=0.9464;ERATE=0.0021;THETA=0.0050;AC=365;AN=2184 GT:DS:GL:BD 0.16712454 0
1 16385175 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.893;BRSQ=0.739;LDAF=0.6242;AVGPOST=0.8662;RSQ=0.7341;ERATE=0.0354;THETA=0.0037;AC=1382;AN=2184 GT:DS:GL:BD 0.63278389 1
1 16385178 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.956;BRSQ=0.684;LDAF=0.0770;AVGPOST=0.9426;RSQ=0.6971;ERATE=0.0033;THETA=0.0026;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 16385184 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.856;BRSQ=0.603;LDAF=0.2983;AVGPOST=0.8628;RSQ=0.6675;ERATE=0.0169;THETA=0.0116;AC=595;AN=2184 GT:DS:GL:BD 0.27243590 0
1 16385221 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.930;LDAF=0.0341;AVGPOST=0.9943;RSQ=0.9397;ERATE=0.0006;THETA=0.0049;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 16385248 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.868;BRSQ=0.753;LDAF=0.4679;AVGPOST=0.8749;RSQ=0.7969;ERATE=0.0140;THETA=0.0013;AC=1021;AN=2184 GT:DS:GL:BD 0.46749085 0
1 16385250 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.884;BRSQ=0.796;LDAF=0.5699;AVGPOST=0.9138;RSQ=0.8696;ERATE=0.0029;THETA=0.0082;AC=1276;AN=2184 GT:DS:GL:BD 0.58424908 1
1 16385254 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.714;LDAF=0.0037;AVGPOST=0.9951;RSQ=0.4950;ERATE=0.0007;THETA=0.0199;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16385264 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.842;LDAF=0.0132;AVGPOST=0.9941;RSQ=0.8199;ERATE=0.0021;THETA=0.0129;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 16385317 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.5919;ERATE=0.0005;THETA=0.0045;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16385323 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.933;BRSQ=0.887;LDAF=0.6780;AVGPOST=0.9234;RSQ=0.8836;ERATE=0.0062;THETA=0.0019;AC=1510;AN=2184 GT:DS:GL:BD 0.69139194 1
1 16385330 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.934;BRSQ=0.892;LDAF=0.7001;AVGPOST=0.9415;RSQ=0.9061;ERATE=0.0020;THETA=0.0146;AC=1543;AN=2184 GT:DS:GL:BD 0.70650184 1
1 16385399 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0034;AVGPOST=0.9992;RSQ=0.8914;ERATE=0.0006;THETA=0.0056;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16385612 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.970;LDAF=0.1543;AVGPOST=0.9784;RSQ=0.9361;ERATE=0.0006;THETA=0.0143;AC=330;AN=2184 GT:DS:GL:BD 0.15109891 0
1 16385698 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.936;BRSQ=0.791;LDAF=0.8828;AVGPOST=0.9363;RSQ=0.7933;ERATE=0.0030;THETA=0.0057;AC=1952;AN=2184 GT:DS:GL:BD 0.89377290 1
1 16385738 rs60151189 GC G 839 PASS INDEL;BAVGPOST=0.709;BRSQ=0.184;LDAF=0.2751;AVGPOST=0.7373;RSQ=0.5339;ERATE=0.0112;THETA=0.0077;AC=526;AN=2184 GT:DS:GL:BD 0.24084249 0
1 16385762 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.957;BRSQ=0.609;LDAF=0.0536;AVGPOST=0.9645;RSQ=0.7058;ERATE=0.0029;THETA=0.0034;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 16385768 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.957;BRSQ=0.902;LDAF=0.2522;AVGPOST=0.9125;RSQ=0.8303;ERATE=0.0106;THETA=0.0102;AC=509;AN=2184 GT:DS:GL:BD 0.23305860 0
1 16385815 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.948;BRSQ=0.822;LDAF=0.1552;AVGPOST=0.9494;RSQ=0.8654;ERATE=0.0013;THETA=0.0072;AC=335;AN=2184 GT:DS:GL:BD 0.15338828 0
1 16385915 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.776;LDAF=0.0087;AVGPOST=0.9953;RSQ=0.7907;ERATE=0.0007;THETA=0.0044;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 16385969 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.809;LDAF=0.0112;AVGPOST=0.9957;RSQ=0.8366;ERATE=0.0005;THETA=0.0071;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 16385978 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8195;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16385980 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.972;LDAF=0.7145;AVGPOST=0.9775;RSQ=0.9572;ERATE=0.0066;THETA=0.0010;AC=1569;AN=2184 GT:DS:GL:BD 0.71840662 1
1 16385991 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0197;AVGPOST=0.9968;RSQ=0.9457;ERATE=0.0005;THETA=0.0045;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 16386008 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.947;BRSQ=0.924;LDAF=0.6956;AVGPOST=0.9516;RSQ=0.9227;ERATE=0.0060;THETA=0.0008;AC=1535;AN=2184 GT:DS:GL:BD 0.70283884 1
1 16386043 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.730;LDAF=0.0054;AVGPOST=0.9958;RSQ=0.6815;ERATE=0.0006;THETA=0.0057;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16386065 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.935;BRSQ=0.615;LDAF=0.0866;AVGPOST=0.9250;RSQ=0.6173;ERATE=0.0051;THETA=0.0067;AC=136;AN=2184 GT:DS:GL:BD 0.06227106 0
1 16386247 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.933;BRSQ=0.793;LDAF=0.8819;AVGPOST=0.9452;RSQ=0.8289;ERATE=0.0026;THETA=0.0042;AC=1953;AN=2184 GT:DS:GL:BD 0.89423078 1
1 16386395 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.835;LDAF=0.0051;AVGPOST=0.9978;RSQ=0.8250;ERATE=0.0004;THETA=0.0024;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16386416 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.7218;AVGPOST=0.9909;RSQ=0.9821;ERATE=0.0011;THETA=0.0015;AC=1577;AN=2184 GT:DS:GL:BD 0.72206962 1
1 16386447 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.923;BRSQ=0.734;LDAF=0.8617;AVGPOST=0.9023;RSQ=0.7241;ERATE=0.0067;THETA=0.0036;AC=1939;AN=2184 GT:DS:GL:BD 0.88782054 1
1 16386620 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.930;LDAF=0.0530;AVGPOST=0.9657;RSQ=0.7470;ERATE=0.0018;THETA=0.0008;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 16386696 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.475;LDAF=0.0258;AVGPOST=0.9683;RSQ=0.4895;ERATE=0.0027;THETA=0.0043;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 16386734 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.775;BRSQ=0.664;LDAF=0.5619;AVGPOST=0.8507;RSQ=0.8084;ERATE=0.0010;THETA=0.0038;AC=1300;AN=2184 GT:DS:GL:BD 0.59523809 1
1 16386756 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.267;LDAF=0.0047;AVGPOST=0.9915;RSQ=0.2252;ERATE=0.0009;THETA=0.0066;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16386760 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.632;LDAF=0.0095;AVGPOST=0.9878;RSQ=0.4761;ERATE=0.0005;THETA=0.0017;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16386807 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.797;BRSQ=0.413;LDAF=0.2107;AVGPOST=0.8460;RSQ=0.7403;ERATE=0.0012;THETA=0.0012;AC=470;AN=2184 GT:DS:GL:BD 0.21520147 0
1 16386846 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.932;BRSQ=0.880;LDAF=0.3144;AVGPOST=0.9372;RSQ=0.9143;ERATE=0.0024;THETA=0.0010;AC=658;AN=2184 GT:DS:GL:BD 0.30128205 0
1 16386849 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.530;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.3099;ERATE=0.0005;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16386864 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.277;LDAF=0.0040;AVGPOST=0.9931;RSQ=0.3277;ERATE=0.0007;THETA=0.0065;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16387030 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.905;BRSQ=0.868;LDAF=0.4202;AVGPOST=0.9499;RSQ=0.9414;ERATE=0.0009;THETA=0.0021;AC=946;AN=2184 GT:DS:GL:BD 0.43315017 0
1 16387163 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16387180 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0231;AVGPOST=0.9988;RSQ=0.9805;ERATE=0.0004;THETA=0.0027;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 16387219 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.9229;AVGPOST=0.9967;RSQ=0.9803;ERATE=0.0004;THETA=0.0011;AC=2018;AN=2184 GT:DS:GL:BD 0.92399269 1
1 16387231 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7587;ERATE=0.0003;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16387402 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.951;LDAF=0.4596;AVGPOST=0.9672;RSQ=0.9580;ERATE=0.0043;THETA=0.0058;AC=1011;AN=2184 GT:DS:GL:BD 0.46291208 0
1 16387445 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.987;LDAF=0.4011;AVGPOST=0.9877;RSQ=0.9842;ERATE=0.0013;THETA=0.0079;AC=876;AN=2184 GT:DS:GL:BD 0.40109891 0
1 16387448 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0198;AVGPOST=0.9983;RSQ=0.9664;ERATE=0.0004;THETA=0.0015;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 16387465 . T TA 15887 PASS INDEL;BAVGPOST=0.963;BRSQ=0.944;LDAF=0.4088;AVGPOST=0.9793;RSQ=0.9747;ERATE=0.0006;THETA=0.0017;AC=904;AN=2184 GT:DS:GL:BD 0.41391942 0
1 16387466 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.958;LDAF=0.4042;AVGPOST=0.9765;RSQ=0.9719;ERATE=0.0012;THETA=0.0044;AC=890;AN=2184 GT:DS:GL:BD 0.40750915 0
1 16387468 . GA G 10749 PASS INDEL;BAVGPOST=0.963;BRSQ=0.944;LDAF=0.4036;AVGPOST=0.9743;RSQ=0.9685;ERATE=0.0007;THETA=0.0004;AC=898;AN=2184 GT:DS:GL:BD 0.41117215 0
1 16387469 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.984;LDAF=0.4165;AVGPOST=0.9876;RSQ=0.9853;ERATE=0.0009;THETA=0.0115;AC=913;AN=2184 GT:DS:GL:BD 0.41804031 0
1 16387573 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.988;LDAF=0.5072;AVGPOST=0.9856;RSQ=0.9822;ERATE=0.0015;THETA=0.0010;AC=1101;AN=2184 GT:DS:GL:BD 0.50412089 1
1 16387629 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2362;AVGPOST=0.9975;RSQ=0.9947;ERATE=0.0006;THETA=0.0090;AC=516;AN=2184 GT:DS:GL:BD 0.23626374 0
1 16387673 . AG A 53 PASS INDEL;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5116;ERATE=0.0004;THETA=0.0043;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16387781 rs56333706 AG A 43269 PASS INDEL;BAVGPOST=0.993;BRSQ=0.990;LDAF=0.3979;AVGPOST=0.9859;RSQ=0.9812;ERATE=0.0013;THETA=0.0057;AC=872;AN=2184 GT:DS:GL:BD 0.39926741 0
1 16387783 . GA G 8744 PASS INDEL;BAVGPOST=0.972;BRSQ=0.955;LDAF=0.3840;AVGPOST=0.9712;RSQ=0.9626;ERATE=0.0014;THETA=0.0053;AC=851;AN=2184 GT:DS:GL:BD 0.38965201 0
1 16388013 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0157;AVGPOST=0.9977;RSQ=0.9409;ERATE=0.0004;THETA=0.0029;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 16388083 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16388096 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0164;AVGPOST=0.9991;RSQ=0.9785;ERATE=0.0003;THETA=0.0010;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 16388155 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5966;ERATE=0.0004;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16388329 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.961;BRSQ=0.752;LDAF=0.0823;AVGPOST=0.9434;RSQ=0.7096;ERATE=0.0048;THETA=0.0026;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 16388467 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0204;AVGPOST=0.9983;RSQ=0.9635;ERATE=0.0004;THETA=0.0055;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 16388474 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.961;LDAF=0.2487;AVGPOST=0.9779;RSQ=0.9618;ERATE=0.0009;THETA=0.0021;AC=533;AN=2184 GT:DS:GL:BD 0.24404761 0
1 16388485 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.919;BRSQ=0.900;LDAF=0.4341;AVGPOST=0.9153;RSQ=0.9015;ERATE=0.0163;THETA=0.0106;AC=953;AN=2184 GT:DS:GL:BD 0.43635532 0
1 16388534 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.967;LDAF=0.2181;AVGPOST=0.9777;RSQ=0.9570;ERATE=0.0006;THETA=0.0065;AC=482;AN=2184 GT:DS:GL:BD 0.22069597 0
1 16388556 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.930;BRSQ=0.878;LDAF=0.6322;AVGPOST=0.9262;RSQ=0.8909;ERATE=0.0107;THETA=0.0047;AC=1405;AN=2184 GT:DS:GL:BD 0.64331502 1
1 16388565 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.960;BRSQ=0.944;LDAF=0.4450;AVGPOST=0.9529;RSQ=0.9467;ERATE=0.0022;THETA=0.0047;AC=966;AN=2184 GT:DS:GL:BD 0.44230768 0
1 16388646 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.912;LDAF=0.8197;AVGPOST=0.9626;RSQ=0.8930;ERATE=0.0085;THETA=0.0048;AC=1806;AN=2184 GT:DS:GL:BD 0.82692307 1
1 16388663 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.938;LDAF=0.0135;AVGPOST=0.9983;RSQ=0.9467;ERATE=0.0003;THETA=0.0012;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 16388709 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.840;BRSQ=0.748;LDAF=0.4455;AVGPOST=0.8385;RSQ=0.7826;ERATE=0.0393;THETA=0.0077;AC=1028;AN=2184 GT:DS:GL:BD 0.47069597 0
1 16388737 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.967;BRSQ=0.922;LDAF=0.2491;AVGPOST=0.9548;RSQ=0.9047;ERATE=0.0118;THETA=0.0078;AC=536;AN=2184 GT:DS:GL:BD 0.24542125 0
1 16388742 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0051;AVGPOST=0.9986;RSQ=0.8814;ERATE=0.0004;THETA=0.0061;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16388766 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.855;BRSQ=0.639;LDAF=0.6613;AVGPOST=0.8295;RSQ=0.6470;ERATE=0.0611;THETA=0.0073;AC=1518;AN=2184 GT:DS:GL:BD 0.69505495 1
1 16388828 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.649;LDAF=0.0066;AVGPOST=0.9890;RSQ=0.2799;ERATE=0.0020;THETA=0.0146;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16388852 . AC A 7004 PASS INDEL;BAVGPOST=0.922;BRSQ=0.815;LDAF=0.2454;AVGPOST=0.8939;RSQ=0.7950;ERATE=0.0077;THETA=0.0209;AC=518;AN=2184 GT:DS:GL:BD 0.23717949 0
1 16388904 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.962;BRSQ=0.908;LDAF=0.2168;AVGPOST=0.9643;RSQ=0.9356;ERATE=0.0011;THETA=0.0010;AC=473;AN=2184 GT:DS:GL:BD 0.21657509 0
1 16388909 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.965;BRSQ=0.918;LDAF=0.2190;AVGPOST=0.9665;RSQ=0.9386;ERATE=0.0009;THETA=0.0087;AC=479;AN=2184 GT:DS:GL:BD 0.21932234 0
1 16388949 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0193;AVGPOST=0.9983;RSQ=0.9571;ERATE=0.0005;THETA=0.0040;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 16388962 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4148;ERATE=0.0006;THETA=0.0127;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16389026 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.937;LDAF=0.2598;AVGPOST=0.9603;RSQ=0.9297;ERATE=0.0041;THETA=0.0032;AC=572;AN=2184 GT:DS:GL:BD 0.26190478 0
1 16389036 . CAAGAG C 761 PASS INDEL;BAVGPOST=0.991;BRSQ=0.583;LDAF=0.0125;AVGPOST=0.9888;RSQ=0.6674;ERATE=0.0018;THETA=0.0055;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 16389061 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.669;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.5307;ERATE=0.0007;THETA=0.0106;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16389118 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.957;LDAF=0.1771;AVGPOST=0.9783;RSQ=0.9493;ERATE=0.0009;THETA=0.0160;AC=376;AN=2184 GT:DS:GL:BD 0.17216118 0
1 16389125 . CCTT C 783 PASS INDEL;BAVGPOST=0.973;BRSQ=0.659;LDAF=0.0532;AVGPOST=0.9526;RSQ=0.6067;ERATE=0.0071;THETA=0.0068;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 16389135 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0166;AVGPOST=0.9989;RSQ=0.9701;ERATE=0.0003;THETA=0.0124;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 16389140 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.857;LDAF=0.0665;AVGPOST=0.9814;RSQ=0.8872;ERATE=0.0005;THETA=0.0005;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 16389141 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.857;LDAF=0.0662;AVGPOST=0.9814;RSQ=0.8871;ERATE=0.0003;THETA=0.0114;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 16389149 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.963;BRSQ=0.750;LDAF=0.0886;AVGPOST=0.9425;RSQ=0.7121;ERATE=0.0137;THETA=0.0026;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 16389288 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.875;LDAF=0.1399;AVGPOST=0.9661;RSQ=0.8944;ERATE=0.0012;THETA=0.0028;AC=309;AN=2184 GT:DS:GL:BD 0.14148352 0
1 16389362 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.691;LDAF=0.0387;AVGPOST=0.9672;RSQ=0.6897;ERATE=0.0049;THETA=0.0034;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 16389374 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.550;LDAF=0.0017;AVGPOST=0.9976;RSQ=0.3891;ERATE=0.0004;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16389375 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.938;BRSQ=0.692;LDAF=0.1215;AVGPOST=0.9142;RSQ=0.6838;ERATE=0.0237;THETA=0.0171;AC=217;AN=2184 GT:DS:GL:BD 0.09935898 0
1 16389390 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.848;LDAF=0.0414;AVGPOST=0.9823;RSQ=0.8396;ERATE=0.0020;THETA=0.0143;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 16389405 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.963;LDAF=0.0428;AVGPOST=0.9950;RSQ=0.9506;ERATE=0.0007;THETA=0.0071;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 16389452 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0041;AVGPOST=0.9988;RSQ=0.8872;ERATE=0.0003;THETA=0.0226;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16389512 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.858;LDAF=0.0246;AVGPOST=0.9931;RSQ=0.9024;ERATE=0.0004;THETA=0.0095;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 16389513 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.857;LDAF=0.0261;AVGPOST=0.9951;RSQ=0.9322;ERATE=0.0004;THETA=0.0031;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 16389540 . C CT 371 PASS INDEL;BAVGPOST=0.995;BRSQ=0.904;LDAF=0.0226;AVGPOST=0.9908;RSQ=0.8670;ERATE=0.0005;THETA=0.0093;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 16389543 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.965;LDAF=0.0285;AVGPOST=0.9960;RSQ=0.9473;ERATE=0.0005;THETA=0.0055;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 16389616 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.753;LDAF=0.0023;AVGPOST=0.9978;RSQ=0.5648;ERATE=0.0004;THETA=0.0078;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16389652 rs112550729 TAA T 6405 PASS INDEL;BAVGPOST=0.988;BRSQ=0.955;LDAF=0.1124;AVGPOST=0.9536;RSQ=0.8292;ERATE=0.0039;THETA=0.0011;AC=215;AN=2184 GT:DS:GL:BD 0.09844323 0
1 16389677 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.942;LDAF=0.0323;AVGPOST=0.9887;RSQ=0.8648;ERATE=0.0006;THETA=0.0024;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 16389691 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0078;AVGPOST=0.9989;RSQ=0.9517;ERATE=0.0004;THETA=0.0020;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 16389695 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.636;LDAF=0.0048;AVGPOST=0.9934;RSQ=0.4336;ERATE=0.0011;THETA=0.0152;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16389703 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.973;LDAF=0.0989;AVGPOST=0.9917;RSQ=0.9686;ERATE=0.0007;THETA=0.0080;AC=213;AN=2184 GT:DS:GL:BD 0.09752747 0
1 16389778 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0301;AVGPOST=0.9992;RSQ=0.9889;ERATE=0.0004;THETA=0.0074;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 16389779 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5444;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16389789 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0043;AVGPOST=0.9981;RSQ=0.8133;ERATE=0.0004;THETA=0.0018;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16389800 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0309;AVGPOST=0.9969;RSQ=0.9656;ERATE=0.0004;THETA=0.0021;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 16389856 . T TG 191 PASS INDEL;BAVGPOST=0.991;BRSQ=0.643;LDAF=0.0152;AVGPOST=0.9868;RSQ=0.6781;ERATE=0.0011;THETA=0.0011;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 16389982 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.7220;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16390007 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0324;AVGPOST=0.9994;RSQ=0.9920;ERATE=0.0003;THETA=0.0067;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 16390045 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0030;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16390081 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0052;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16390208 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8005;ERATE=0.0006;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16390283 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0051;AVGPOST=0.9997;RSQ=0.9750;ERATE=0.0003;THETA=0.0013;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16390319 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.0579;AVGPOST=0.9986;RSQ=0.9912;ERATE=0.0003;THETA=0.0024;AC=126;AN=2184 GT:DS:GL:BD 0.05769231 0
1 16390336 . ATCT A 10870 PASS INDEL;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0610;AVGPOST=0.9989;RSQ=0.9933;ERATE=0.0003;THETA=0.0008;AC=133;AN=2184 GT:DS:GL:BD 0.06089744 0
1 16390358 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0914;AVGPOST=0.9994;RSQ=0.9972;ERATE=0.0011;THETA=0.0014;AC=200;AN=2184 GT:DS:GL:BD 0.09157509 0
1 16390528 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0300;AVGPOST=0.9987;RSQ=0.9841;ERATE=0.0004;THETA=0.0006;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 16390535 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0612;AVGPOST=0.9990;RSQ=0.9939;ERATE=0.0004;THETA=0.0012;AC=133;AN=2184 GT:DS:GL:BD 0.06089744 0
1 16390604 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0293;AVGPOST=0.9999;RSQ=0.9985;ERATE=0.0003;THETA=0.0012;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 16390628 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.949;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.9192;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16390709 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8496;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16390737 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0048;AVGPOST=0.9994;RSQ=0.9374;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16390813 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.3539;AVGPOST=0.9937;RSQ=0.9913;ERATE=0.0005;THETA=0.0014;AC=772;AN=2184 GT:DS:GL:BD 0.35347986 0
1 16390855 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5598;ERATE=0.0004;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16390866 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.8041;ERATE=0.0008;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16390894 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.773;LDAF=0.0045;AVGPOST=0.9963;RSQ=0.7024;ERATE=0.0006;THETA=0.0016;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16390895 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0082;AVGPOST=0.9998;RSQ=0.9877;ERATE=0.0003;THETA=0.0020;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 16390909 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0023;AVGPOST=0.9995;RSQ=0.9060;ERATE=0.0003;THETA=0.0014;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16390938 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8083;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16390988 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.3772;AVGPOST=0.9959;RSQ=0.9946;ERATE=0.0003;THETA=0.0058;AC=825;AN=2184 GT:DS:GL:BD 0.37774727 0
1 16391035 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6952;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16391056 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.4588;AVGPOST=0.9977;RSQ=0.9972;ERATE=0.0004;THETA=0.0011;AC=1003;AN=2184 GT:DS:GL:BD 0.45924908 0
1 16391118 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0280;AVGPOST=0.9995;RSQ=0.9927;ERATE=0.0003;THETA=0.0016;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 16391120 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0234;AVGPOST=0.9973;RSQ=0.9522;ERATE=0.0022;THETA=0.0014;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 16391121 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0018;AVGPOST=0.9978;RSQ=0.5077;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16391122 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16391189 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5835;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16391190 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8654;ERATE=0.0003;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16391217 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0295;AVGPOST=0.9995;RSQ=0.9922;ERATE=0.0003;THETA=0.0031;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 16391225 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6293;ERATE=0.0006;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16391327 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.949;LDAF=0.0398;AVGPOST=0.9981;RSQ=0.9806;ERATE=0.0004;THETA=0.0005;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 16391328 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.949;LDAF=0.0404;AVGPOST=0.9989;RSQ=0.9878;ERATE=0.0003;THETA=0.0008;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 16391568 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0296;AVGPOST=0.9994;RSQ=0.9930;ERATE=0.0003;THETA=0.0024;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 16391617 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0561;AVGPOST=0.9985;RSQ=0.9889;ERATE=0.0003;THETA=0.0006;AC=122;AN=2184 GT:DS:GL:BD 0.05586081 0
1 16391657 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0332;AVGPOST=0.9989;RSQ=0.9882;ERATE=0.0004;THETA=0.0004;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 16391701 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.8057;ERATE=0.0012;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16391701 . CT C 15 PASS INDEL;BAVGPOST=0.891;BRSQ=0.104;LDAF=0.1508;AVGPOST=0.7504;RSQ=0.2071;ERATE=0.0106;THETA=0.0005;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 16391703 rs112158999 TC T 731 PASS INDEL;BAVGPOST=0.973;BRSQ=0.817;LDAF=0.0612;AVGPOST=0.9863;RSQ=0.9244;ERATE=0.0003;THETA=0.0006;AC=138;AN=2184 GT:DS:GL:BD 0.06318682 0
1 16391755 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16391791 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.891;LDAF=0.0201;AVGPOST=0.9958;RSQ=0.9122;ERATE=0.0004;THETA=0.0008;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 16391837 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9429;ERATE=0.0005;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16392065 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5709;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16392078 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0283;AVGPOST=0.9991;RSQ=0.9856;ERATE=0.0003;THETA=0.0006;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 16392107 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.6314;ERATE=0.0004;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16392169 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0058;AVGPOST=0.9991;RSQ=0.9374;ERATE=0.0004;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 16392189 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.777;LDAF=0.0029;AVGPOST=0.9977;RSQ=0.6519;ERATE=0.0006;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16392273 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6228;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16392406 . T TC 675 PASS INDEL;BAVGPOST=0.922;BRSQ=0.563;LDAF=0.0743;AVGPOST=0.9449;RSQ=0.7371;ERATE=0.0010;THETA=0.0009;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 16392487 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.986;LDAF=0.1886;AVGPOST=0.9954;RSQ=0.9893;ERATE=0.0004;THETA=0.0012;AC=414;AN=2184 GT:DS:GL:BD 0.18956044 0
1 16392508 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0084;AVGPOST=0.9993;RSQ=0.9613;ERATE=0.0004;THETA=0.0020;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 16392583 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.779;LDAF=0.0029;AVGPOST=0.9978;RSQ=0.6496;ERATE=0.0009;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16392624 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.420;LDAF=0.0047;AVGPOST=0.9925;RSQ=0.4182;ERATE=0.0010;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16392674 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6236;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16392712 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16392722 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5996;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16392751 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16392865 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6710;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16392901 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0084;AVGPOST=0.9994;RSQ=0.9668;ERATE=0.0003;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 16393025 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5225;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16393074 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0023;AVGPOST=0.9982;RSQ=0.7016;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16393173 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16393357 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3916;AVGPOST=0.9977;RSQ=0.9970;ERATE=0.0004;THETA=0.0007;AC=855;AN=2184 GT:DS:GL:BD 0.39148352 0
1 16393393 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1914;AVGPOST=0.9977;RSQ=0.9949;ERATE=0.0005;THETA=0.0003;AC=418;AN=2184 GT:DS:GL:BD 0.19139194 0
1 16393599 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4514;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16393811 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.1904;AVGPOST=0.9982;RSQ=0.9954;ERATE=0.0005;THETA=0.0003;AC=415;AN=2184 GT:DS:GL:BD 0.19001831 0
1 16393819 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.811;LDAF=0.0234;AVGPOST=0.9881;RSQ=0.7985;ERATE=0.0006;THETA=0.0007;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 16393885 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0067;AVGPOST=0.9994;RSQ=0.9673;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 16393891 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0045;AVGPOST=0.9992;RSQ=0.9193;ERATE=0.0003;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16393952 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.1901;AVGPOST=0.9997;RSQ=0.9991;ERATE=0.0003;THETA=0.0004;AC=415;AN=2184 GT:DS:GL:BD 0.19001831 0
1 16394082 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9734;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16394161 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6878;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16394322 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0048;AVGPOST=0.9993;RSQ=0.9332;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16394388 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1901;AVGPOST=0.9994;RSQ=0.9983;ERATE=0.0004;THETA=0.0007;AC=415;AN=2184 GT:DS:GL:BD 0.19001831 0
1 16394441 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0131;AVGPOST=0.9995;RSQ=0.9812;ERATE=0.0003;THETA=0.0022;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 16394542 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0035;AVGPOST=0.9988;RSQ=0.8450;ERATE=0.0004;THETA=0.0021;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16394544 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7494;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16394582 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.902;LDAF=0.0120;AVGPOST=0.9963;RSQ=0.8813;ERATE=0.0004;THETA=0.0008;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 16394747 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16394791 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6462;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16394859 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0380;AVGPOST=0.9988;RSQ=0.9867;ERATE=0.0003;THETA=0.0005;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 16394888 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0060;AVGPOST=0.9990;RSQ=0.9359;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 16394995 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.739;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4794;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16395028 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.972;LDAF=0.0327;AVGPOST=0.9948;RSQ=0.9371;ERATE=0.0010;THETA=0.0003;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 16395029 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3906;AVGPOST=0.9955;RSQ=0.9945;ERATE=0.0005;THETA=0.0012;AC=853;AN=2184 GT:DS:GL:BD 0.39056778 0
1 16395054 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.612;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.4139;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16395147 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1904;AVGPOST=0.9982;RSQ=0.9959;ERATE=0.0005;THETA=0.0026;AC=415;AN=2184 GT:DS:GL:BD 0.19001831 0
1 16395206 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0080;AVGPOST=0.9994;RSQ=0.9697;ERATE=0.0003;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 16395207 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0083;AVGPOST=0.9989;RSQ=0.9503;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 16395213 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.822;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8561;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16395362 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9785;ERATE=0.0005;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16395429 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9448;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16395456 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16395462 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.916;LDAF=0.0118;AVGPOST=0.9980;RSQ=0.9398;ERATE=0.0004;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 16395487 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0082;AVGPOST=0.9998;RSQ=0.9868;ERATE=0.0003;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 16395490 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0126;AVGPOST=0.9989;RSQ=0.9618;ERATE=0.0005;THETA=0.0009;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 16395574 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5907;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16395590 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3464;AVGPOST=0.9958;RSQ=0.9941;ERATE=0.0004;THETA=0.0017;AC=758;AN=2184 GT:DS:GL:BD 0.34706959 0
1 16395603 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16395709 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5353;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16395829 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.734;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7370;ERATE=0.0004;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16395949 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0108;AVGPOST=0.9991;RSQ=0.9690;ERATE=0.0003;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 16395980 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.823;LDAF=0.0060;AVGPOST=0.9969;RSQ=0.7890;ERATE=0.0005;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16396008 . TG T 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.681;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4385;ERATE=0.0008;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16396115 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0157;AVGPOST=0.9984;RSQ=0.9607;ERATE=0.0004;THETA=0.0041;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 16396246 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0042;AVGPOST=0.9996;RSQ=0.9556;ERATE=0.0003;THETA=0.0011;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16396270 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7014;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16396318 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1811;AVGPOST=0.9976;RSQ=0.9939;ERATE=0.0003;THETA=0.0011;AC=395;AN=2184 GT:DS:GL:BD 0.18086080 0
1 16396341 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0084;AVGPOST=0.9996;RSQ=0.9767;ERATE=0.0003;THETA=0.0040;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 16396504 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0046;AVGPOST=0.9969;RSQ=0.7154;ERATE=0.0010;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16396546 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.952;LDAF=0.0234;AVGPOST=0.9986;RSQ=0.9766;ERATE=0.0003;THETA=0.0014;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 16396586 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0014;AVGPOST=0.9996;RSQ=0.8819;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16396618 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0129;AVGPOST=0.9997;RSQ=0.9904;ERATE=0.0004;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 16396625 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0068;AVGPOST=0.9991;RSQ=0.9463;ERATE=0.0003;THETA=0.0012;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16396698 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1670;AVGPOST=0.9988;RSQ=0.9970;ERATE=0.0003;THETA=0.0008;AC=366;AN=2184 GT:DS:GL:BD 0.16758242 0
1 16396806 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1532;AVGPOST=0.9993;RSQ=0.9981;ERATE=0.0003;THETA=0.0007;AC=335;AN=2184 GT:DS:GL:BD 0.15338828 0
1 16396834 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7452;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16396851 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5417;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16396896 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0050;AVGPOST=0.9986;RSQ=0.8806;ERATE=0.0003;THETA=0.0011;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16396897 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9141;ERATE=0.0003;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16396902 rs34944409 CT C 1125 PASS INDEL;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0174;AVGPOST=0.9976;RSQ=0.9378;ERATE=0.0005;THETA=0.0007;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 16397020 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.642;LDAF=0.0021;AVGPOST=0.9973;RSQ=0.4179;ERATE=0.0008;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16397184 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.883;LDAF=0.0114;AVGPOST=0.9970;RSQ=0.8912;ERATE=0.0004;THETA=0.0016;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 16397348 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0054;AVGPOST=0.9988;RSQ=0.9092;ERATE=0.0004;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16397534 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5149;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16397574 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7683;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16397636 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.700;LDAF=0.0021;AVGPOST=0.9973;RSQ=0.5032;ERATE=0.0005;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16397733 rs113847540 AG A 12903 PASS INDEL;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1252;AVGPOST=0.9959;RSQ=0.9879;ERATE=0.0008;THETA=0.0013;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 16397803 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16397851 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0041;AVGPOST=0.9999;RSQ=0.9841;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16397870 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1248;AVGPOST=0.9979;RSQ=0.9945;ERATE=0.0004;THETA=0.0014;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 16397970 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0790;AVGPOST=0.9981;RSQ=0.9909;ERATE=0.0008;THETA=0.0012;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 16398375 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.988;LDAF=0.3823;AVGPOST=0.9910;RSQ=0.9869;ERATE=0.0009;THETA=0.0025;AC=833;AN=2184 GT:DS:GL:BD 0.38141027 0
1 16398446 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9904;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16398521 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0017;AVGPOST=0.9977;RSQ=0.4956;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16398597 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.909;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.8958;ERATE=0.0004;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16398662 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6426;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16398726 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4802;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16398845 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7837;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16399119 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0460;AVGPOST=0.9974;RSQ=0.9775;ERATE=0.0004;THETA=0.0005;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 16399176 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.804;LDAF=0.0024;AVGPOST=0.9981;RSQ=0.6245;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16399657 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0082;AVGPOST=0.9973;RSQ=0.8363;ERATE=0.0008;THETA=0.0010;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16399664 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0115;AVGPOST=0.9968;RSQ=0.8938;ERATE=0.0006;THETA=0.0010;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 16399787 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.906;LDAF=0.0304;AVGPOST=0.9818;RSQ=0.7618;ERATE=0.0015;THETA=0.0010;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 16399850 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.872;LDAF=0.0237;AVGPOST=0.9810;RSQ=0.6681;ERATE=0.0022;THETA=0.0006;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 16400004 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.910;BRSQ=0.422;LDAF=0.1148;AVGPOST=0.8956;RSQ=0.6018;ERATE=0.0064;THETA=0.0011;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 16400040 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.923;BRSQ=0.414;LDAF=0.1054;AVGPOST=0.8705;RSQ=0.4614;ERATE=0.0082;THETA=0.0005;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 16400047 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.962;BRSQ=0.277;LDAF=0.0719;AVGPOST=0.9032;RSQ=0.4357;ERATE=0.0055;THETA=0.0003;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 16400092 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.925;BRSQ=0.065;LDAF=0.0975;AVGPOST=0.8567;RSQ=0.3465;ERATE=0.0032;THETA=0.0007;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 16400207 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.273;LDAF=0.0295;AVGPOST=0.9576;RSQ=0.3906;ERATE=0.0027;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 16400384 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3907;AVGPOST=0.9931;RSQ=0.9909;ERATE=0.0004;THETA=0.0007;AC=852;AN=2184 GT:DS:GL:BD 0.39010990 0
1 16400573 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16400601 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16400617 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16400711 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5551;ERATE=0.0004;THETA=0.0068;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16400733 rs113645111 G GT 977 PASS INDEL;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0099;AVGPOST=0.9975;RSQ=0.8933;ERATE=0.0004;THETA=0.0023;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 16400777 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16400976 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0037;AVGPOST=0.9997;RSQ=0.9596;ERATE=0.0003;THETA=0.0011;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16401244 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0192;AVGPOST=0.9973;RSQ=0.9484;ERATE=0.0004;THETA=0.0009;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 16401377 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.932;LDAF=0.0146;AVGPOST=0.9971;RSQ=0.9279;ERATE=0.0005;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 16401416 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0070;AVGPOST=0.9967;RSQ=0.8141;ERATE=0.0006;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 16401497 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.744;LDAF=0.0035;AVGPOST=0.9974;RSQ=0.7195;ERATE=0.0005;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16401607 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0098;AVGPOST=0.9991;RSQ=0.9642;ERATE=0.0003;THETA=0.0009;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 16401631 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.539;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5642;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16401645 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0191;AVGPOST=0.9982;RSQ=0.9599;ERATE=0.0004;THETA=0.0007;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 16401660 . AAAAT A 25 PASS INDEL;BAVGPOST=0.997;BRSQ=0.610;LDAF=0.0048;AVGPOST=0.9934;RSQ=0.4413;ERATE=0.0011;THETA=0.0015;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16401778 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0168;AVGPOST=0.9980;RSQ=0.9456;ERATE=0.0004;THETA=0.0007;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 16401828 rs35157641 C CA 529 PASS INDEL;BAVGPOST=0.705;BRSQ=0.171;LDAF=0.2579;AVGPOST=0.6851;RSQ=0.2972;ERATE=0.0279;THETA=0.0023;AC=302;AN=2184 GT:DS:GL:BD 0.13827839 0
1 16401927 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0030;AVGPOST=0.9990;RSQ=0.8659;ERATE=0.0005;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16402058 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16402064 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7189;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16402089 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.715;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7440;ERATE=0.0005;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16402090 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.762;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16402110 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5323;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16402158 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16402205 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16402217 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16402273 . AG A 1586 PASS INDEL;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0090;AVGPOST=0.9993;RSQ=0.9657;ERATE=0.0004;THETA=0.0011;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 16402308 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.884;LDAF=0.0190;AVGPOST=0.9966;RSQ=0.9178;ERATE=0.0005;THETA=0.0016;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 16402323 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0127;AVGPOST=0.9995;RSQ=0.9852;ERATE=0.0003;THETA=0.0007;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 16402362 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16402408 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0083;AVGPOST=0.9990;RSQ=0.9536;ERATE=0.0003;THETA=0.0008;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 16402429 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7172;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16402530 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9741;ERATE=0.0003;THETA=0.0012;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16402694 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8258;ERATE=0.0003;THETA=0.0036;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16402932 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.974;LDAF=0.1784;AVGPOST=0.9867;RSQ=0.9685;ERATE=0.0005;THETA=0.0045;AC=388;AN=2184 GT:DS:GL:BD 0.17765568 0
1 16402993 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16403024 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0049;AVGPOST=0.9989;RSQ=0.9035;ERATE=0.0004;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16403059 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0397;AVGPOST=0.9991;RSQ=0.9895;ERATE=0.0004;THETA=0.0013;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 16403150 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8328;ERATE=0.0003;THETA=0.0016;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16403208 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.912;LDAF=0.0141;AVGPOST=0.9947;RSQ=0.8499;ERATE=0.0013;THETA=0.0010;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 16403312 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0302;AVGPOST=0.9980;RSQ=0.9742;ERATE=0.0005;THETA=0.0037;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 16403335 . GGAGA G 43 PASS INDEL;BAVGPOST=0.999;BRSQ=0.594;LDAF=0.0021;AVGPOST=0.9975;RSQ=0.5002;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16403344 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0048;AVGPOST=0.9984;RSQ=0.8448;ERATE=0.0004;THETA=0.0028;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16403351 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.598;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.6005;ERATE=0.0003;THETA=0.0018;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16403412 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0043;AVGPOST=0.9984;RSQ=0.8718;ERATE=0.0003;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16403434 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5706;ERATE=0.0003;THETA=0.0036;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16403551 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.705;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7303;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16403711 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0295;AVGPOST=0.9996;RSQ=0.9958;ERATE=0.0003;THETA=0.0011;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 16403719 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0128;AVGPOST=0.9999;RSQ=0.9968;ERATE=0.0003;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 16403725 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9785;ERATE=0.0003;THETA=0.0020;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16403739 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7968;ERATE=0.0005;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16403807 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0165;AVGPOST=0.9991;RSQ=0.9794;ERATE=0.0003;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 16403855 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0153;AVGPOST=0.9992;RSQ=0.9753;ERATE=0.0004;THETA=0.0032;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 16403878 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0297;AVGPOST=0.9987;RSQ=0.9818;ERATE=0.0005;THETA=0.0008;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 16403890 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.822;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8828;ERATE=0.0003;THETA=0.0021;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16403915 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6808;ERATE=0.0003;THETA=0.0049;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16403984 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0046;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16403986 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0135;AVGPOST=0.9995;RSQ=0.9854;ERATE=0.0003;THETA=0.0002;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 16404030 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0384;AVGPOST=0.9985;RSQ=0.9886;ERATE=0.0003;THETA=0.0005;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 16404153 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.871;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8600;ERATE=0.0004;THETA=0.0013;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16404161 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.739;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5792;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16404355 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0174;AVGPOST=0.9999;RSQ=0.9961;ERATE=0.0003;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 16404375 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0049;AVGPOST=0.9997;RSQ=0.9780;ERATE=0.0003;THETA=0.0014;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16404496 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0219;AVGPOST=0.9993;RSQ=0.9842;ERATE=0.0003;THETA=0.0017;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 16404716 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.732;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7503;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16404946 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0166;AVGPOST=0.9993;RSQ=0.9819;ERATE=0.0004;THETA=0.0011;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 16404962 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.603;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7435;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16405102 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0044;AVGPOST=0.9963;RSQ=0.6453;ERATE=0.0009;THETA=0.0013;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16405120 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.978;LDAF=0.5455;AVGPOST=0.9824;RSQ=0.9756;ERATE=0.0012;THETA=0.0007;AC=1203;AN=2184 GT:DS:GL:BD 0.55082417 1
1 16405193 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.674;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.3659;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16405252 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.924;LDAF=0.0210;AVGPOST=0.9955;RSQ=0.9125;ERATE=0.0007;THETA=0.0009;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 16405315 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.989;LDAF=0.1284;AVGPOST=0.9693;RSQ=0.9031;ERATE=0.0013;THETA=0.0005;AC=281;AN=2184 GT:DS:GL:BD 0.12866300 0
1 16405592 . C CTT 1875 PASS INDEL;BAVGPOST=0.985;BRSQ=0.823;LDAF=0.0447;AVGPOST=0.9867;RSQ=0.8866;ERATE=0.0030;THETA=0.0021;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 16405601 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0105;AVGPOST=0.9978;RSQ=0.9196;ERATE=0.0004;THETA=0.0008;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 16405630 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6343;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16405687 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5696;AVGPOST=0.9930;RSQ=0.9900;ERATE=0.0005;THETA=0.0010;AC=1246;AN=2184 GT:DS:GL:BD 0.57051283 1
1 16405688 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0139;AVGPOST=0.9974;RSQ=0.9388;ERATE=0.0003;THETA=0.0012;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 16405869 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16405951 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.887;LDAF=0.1197;AVGPOST=0.9766;RSQ=0.9269;ERATE=0.0012;THETA=0.0019;AC=254;AN=2184 GT:DS:GL:BD 0.11630037 0
1 16405964 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16406014 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0088;AVGPOST=0.9996;RSQ=0.9823;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 16406042 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4955;ERATE=0.0006;THETA=0.0047;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16406085 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7395;ERATE=0.0003;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16406102 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.841;LDAF=0.0096;AVGPOST=0.9974;RSQ=0.8983;ERATE=0.0004;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 16406103 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.711;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5891;ERATE=0.0004;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16406162 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4971;AVGPOST=0.9952;RSQ=0.9940;ERATE=0.0005;THETA=0.0014;AC=1084;AN=2184 GT:DS:GL:BD 0.49633700 0
1 16406284 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16406332 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0128;AVGPOST=0.9997;RSQ=0.9891;ERATE=0.0003;THETA=0.0015;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 16406481 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.723;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8211;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16406524 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0300;AVGPOST=0.9984;RSQ=0.9787;ERATE=0.0005;THETA=0.0006;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 16406533 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0047;AVGPOST=0.9984;RSQ=0.8655;ERATE=0.0004;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16406589 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.916;BRSQ=0.872;LDAF=0.5185;AVGPOST=0.9122;RSQ=0.8837;ERATE=0.0138;THETA=0.0006;AC=1172;AN=2184 GT:DS:GL:BD 0.53663003 1
1 16406762 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.628;LDAF=0.0032;AVGPOST=0.9965;RSQ=0.6246;ERATE=0.0004;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16406769 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.619;LDAF=0.0028;AVGPOST=0.9969;RSQ=0.6235;ERATE=0.0006;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16406772 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.621;LDAF=0.0030;AVGPOST=0.9964;RSQ=0.5914;ERATE=0.0006;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16406810 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0066;AVGPOST=0.9950;RSQ=0.7029;ERATE=0.0015;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16406840 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0222;AVGPOST=0.9995;RSQ=0.9878;ERATE=0.0003;THETA=0.0012;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 16406849 . C CA 5381 PASS INDEL;BAVGPOST=0.897;BRSQ=0.622;LDAF=0.1814;AVGPOST=0.8840;RSQ=0.6685;ERATE=0.0434;THETA=0.0003;AC=315;AN=2184 GT:DS:GL:BD 0.14423077 0
1 16406907 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0051;AVGPOST=0.9990;RSQ=0.9221;ERATE=0.0003;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16406916 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16406930 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0052;AVGPOST=0.9992;RSQ=0.9331;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16407131 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9709;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16407171 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7227;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16407368 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0018;AVGPOST=0.9986;RSQ=0.7002;ERATE=0.0006;THETA=0.0027;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16407484 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.6333;AVGPOST=0.9916;RSQ=0.9872;ERATE=0.0008;THETA=0.0003;AC=1385;AN=2184 GT:DS:GL:BD 0.63415754 1
1 16407499 . C CCTGGAGTG 15906 PASS INDEL;BAVGPOST=0.952;BRSQ=0.788;LDAF=0.1276;AVGPOST=0.9817;RSQ=0.9386;ERATE=0.0005;THETA=0.0006;AC=288;AN=2184 GT:DS:GL:BD 0.13186814 0
1 16407553 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5598;ERATE=0.0003;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16407611 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.501;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4019;ERATE=0.0005;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16407643 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.569;LDAF=0.0099;AVGPOST=0.9907;RSQ=0.6190;ERATE=0.0025;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 16407727 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5758;AVGPOST=0.9921;RSQ=0.9883;ERATE=0.0012;THETA=0.0013;AC=1256;AN=2184 GT:DS:GL:BD 0.57509160 1
1 16407745 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.610;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5969;ERATE=0.0004;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16407824 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5364;AVGPOST=0.9981;RSQ=0.9972;ERATE=0.0005;THETA=0.0010;AC=1171;AN=2184 GT:DS:GL:BD 0.53617215 1
1 16407987 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8165;AVGPOST=0.9970;RSQ=0.9920;ERATE=0.0005;THETA=0.0008;AC=1785;AN=2184 GT:DS:GL:BD 0.81730771 1
1 16408021 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0277;AVGPOST=0.9973;RSQ=0.9641;ERATE=0.0004;THETA=0.0005;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 16408031 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.8119;AVGPOST=0.9867;RSQ=0.9704;ERATE=0.0011;THETA=0.0028;AC=1780;AN=2184 GT:DS:GL:BD 0.81501830 1
1 16408033 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0093;AVGPOST=0.9979;RSQ=0.9160;ERATE=0.0005;THETA=0.0108;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 16408132 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0093;AVGPOST=0.9997;RSQ=0.9857;ERATE=0.0003;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 16408155 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.578;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.6597;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16408437 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.754;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6981;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16408546 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5980;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16408644 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9472;ERATE=0.0003;THETA=0.0014;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16408809 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5014;AVGPOST=0.9958;RSQ=0.9949;ERATE=0.0003;THETA=0.0041;AC=1095;AN=2184 GT:DS:GL:BD 0.50137365 1
1 16408820 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1842;AVGPOST=0.9954;RSQ=0.9887;ERATE=0.0005;THETA=0.0037;AC=401;AN=2184 GT:DS:GL:BD 0.18360806 0
1 16408868 . CAG C 92 PASS INDEL;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7049;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16408917 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.986;LDAF=0.0632;AVGPOST=0.9971;RSQ=0.9851;ERATE=0.0004;THETA=0.0015;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 16409013 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.732;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.6593;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16409025 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6767;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16409169 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.847;LDAF=0.0050;AVGPOST=0.9991;RSQ=0.9195;ERATE=0.0003;THETA=0.0024;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16409286 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0022;AVGPOST=0.9990;RSQ=0.7940;ERATE=0.0004;THETA=0.0031;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16409289 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.898;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9544;ERATE=0.0004;THETA=0.0022;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16409292 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.955;LDAF=0.0187;AVGPOST=0.9966;RSQ=0.9334;ERATE=0.0006;THETA=0.0072;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 16409357 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0054;AVGPOST=0.9992;RSQ=0.9344;ERATE=0.0004;THETA=0.0010;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16409554 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0041;AVGPOST=1.0000;RSQ=0.9947;ERATE=0.0003;THETA=0.0066;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16409679 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.855;LDAF=0.0044;AVGPOST=0.9985;RSQ=0.8461;ERATE=0.0006;THETA=0.0015;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16409784 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6229;ERATE=0.0004;THETA=0.0082;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16409984 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5051;ERATE=0.0005;THETA=0.0134;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16410014 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.717;LDAF=0.0018;AVGPOST=0.9975;RSQ=0.5077;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16410033 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.964;LDAF=0.0221;AVGPOST=0.9981;RSQ=0.9664;ERATE=0.0004;THETA=0.0040;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 16410114 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.809;LDAF=0.0098;AVGPOST=0.9926;RSQ=0.6956;ERATE=0.0025;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 16410124 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.957;BRSQ=0.859;LDAF=0.1495;AVGPOST=0.9514;RSQ=0.8589;ERATE=0.0096;THETA=0.0055;AC=309;AN=2184 GT:DS:GL:BD 0.14148352 0
1 16410170 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.960;BRSQ=0.945;LDAF=0.5307;AVGPOST=0.9626;RSQ=0.9543;ERATE=0.0011;THETA=0.0008;AC=1161;AN=2184 GT:DS:GL:BD 0.53159338 1
1 16410178 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.959;BRSQ=0.943;LDAF=0.5325;AVGPOST=0.9644;RSQ=0.9570;ERATE=0.0013;THETA=0.0083;AC=1165;AN=2184 GT:DS:GL:BD 0.53342491 1
1 16410488 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.727;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5799;ERATE=0.0004;THETA=0.0052;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16410608 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0026;AVGPOST=0.9979;RSQ=0.6931;ERATE=0.0004;THETA=0.0130;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16410625 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.763;LDAF=0.0020;AVGPOST=0.9969;RSQ=0.3066;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16410663 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0038;AVGPOST=0.9992;RSQ=0.9047;ERATE=0.0004;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16410676 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0064;AVGPOST=0.9954;RSQ=0.7277;ERATE=0.0005;THETA=0.0034;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16410718 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.809;LDAF=0.0764;AVGPOST=0.9698;RSQ=0.8275;ERATE=0.0017;THETA=0.0064;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 16410779 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.952;LDAF=0.4831;AVGPOST=0.9571;RSQ=0.9493;ERATE=0.0017;THETA=0.0037;AC=1066;AN=2184 GT:DS:GL:BD 0.48809522 0
1 16410875 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.626;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.5681;ERATE=0.0006;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16410889 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0103;AVGPOST=0.9984;RSQ=0.9345;ERATE=0.0004;THETA=0.0165;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 16410973 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.777;LDAF=0.0064;AVGPOST=0.9942;RSQ=0.6562;ERATE=0.0006;THETA=0.0031;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16411016 rs34568113 GCCT G 60001 PASS INDEL;BAVGPOST=0.957;BRSQ=0.890;LDAF=0.8193;AVGPOST=0.9544;RSQ=0.8951;ERATE=0.0039;THETA=0.0020;AC=1803;AN=2184 GT:DS:GL:BD 0.82554942 1
1 16411059 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.919;LDAF=0.0159;AVGPOST=0.9968;RSQ=0.9349;ERATE=0.0003;THETA=0.0097;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 16411061 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6626;ERATE=0.0005;THETA=0.0084;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16411097 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7748;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16411141 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7051;ERATE=0.0003;THETA=0.0038;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16411150 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.952;LDAF=0.8045;AVGPOST=0.9794;RSQ=0.9570;ERATE=0.0084;THETA=0.0059;AC=1761;AN=2184 GT:DS:GL:BD 0.80631870 1
1 16411193 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0016;AVGPOST=0.9980;RSQ=0.5033;ERATE=0.0004;THETA=0.0084;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16411483 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.923;LDAF=0.0195;AVGPOST=0.9936;RSQ=0.8765;ERATE=0.0006;THETA=0.0057;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 16411570 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.734;LDAF=0.0024;AVGPOST=0.9975;RSQ=0.5468;ERATE=0.0010;THETA=0.0077;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16411580 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.966;LDAF=0.4633;AVGPOST=0.9729;RSQ=0.9665;ERATE=0.0009;THETA=0.0053;AC=1014;AN=2184 GT:DS:GL:BD 0.46428570 0
1 16411643 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0062;AVGPOST=0.9981;RSQ=0.8769;ERATE=0.0004;THETA=0.0111;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 16411867 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5857;ERATE=0.0004;THETA=0.0073;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16411877 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0840;AVGPOST=0.9973;RSQ=0.9869;ERATE=0.0004;THETA=0.0009;AC=181;AN=2184 GT:DS:GL:BD 0.08287546 0
1 16411933 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.695;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.6288;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16411934 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6494;ERATE=0.0003;THETA=0.0036;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16412036 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0413;AVGPOST=0.9983;RSQ=0.9837;ERATE=0.0004;THETA=0.0007;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 16412200 . T TG 6953 PASS INDEL;BAVGPOST=0.989;BRSQ=0.948;LDAF=0.1072;AVGPOST=0.9829;RSQ=0.9294;ERATE=0.0011;THETA=0.0093;AC=225;AN=2184 GT:DS:GL:BD 0.10302198 0
1 16412290 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.836;LDAF=0.0085;AVGPOST=0.9963;RSQ=0.8202;ERATE=0.0003;THETA=0.0053;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 16412615 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.794;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7993;ERATE=0.0009;THETA=0.0026;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16412743 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0028;AVGPOST=0.9970;RSQ=0.5747;ERATE=0.0005;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16413007 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5682;ERATE=0.0004;THETA=0.0068;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16413069 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1506;AVGPOST=0.9992;RSQ=0.9974;ERATE=0.0004;THETA=0.0008;AC=328;AN=2184 GT:DS:GL:BD 0.15018316 0
1 16413191 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.1506;AVGPOST=0.9990;RSQ=0.9969;ERATE=0.0004;THETA=0.0004;AC=328;AN=2184 GT:DS:GL:BD 0.15018316 0
1 16413291 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.2927;AVGPOST=0.9958;RSQ=0.9925;ERATE=0.0006;THETA=0.0006;AC=638;AN=2184 GT:DS:GL:BD 0.29212454 0
1 16413319 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0082;AVGPOST=0.9993;RSQ=0.9637;ERATE=0.0003;THETA=0.0012;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 16413506 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.819;LDAF=0.0120;AVGPOST=0.9889;RSQ=0.6288;ERATE=0.0013;THETA=0.0011;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 16413595 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.595;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.3421;ERATE=0.0008;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16413662 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0243;AVGPOST=0.9947;RSQ=0.9246;ERATE=0.0004;THETA=0.0006;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 16413765 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.977;LDAF=0.4438;AVGPOST=0.9859;RSQ=0.9813;ERATE=0.0011;THETA=0.0003;AC=972;AN=2184 GT:DS:GL:BD 0.44505495 0
1 16413795 . C CA 3931 PASS INDEL;BAVGPOST=0.769;BRSQ=0.497;LDAF=0.6839;AVGPOST=0.7512;RSQ=0.5345;ERATE=0.0225;THETA=0.0013;AC=1583;AN=2184 GT:DS:GL:BD 0.72481686 1
1 16413804 . A AC 169 PASS INDEL;BAVGPOST=0.992;BRSQ=0.539;LDAF=0.0135;AVGPOST=0.9809;RSQ=0.4540;ERATE=0.0030;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16413844 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.754;LDAF=0.0039;AVGPOST=0.9976;RSQ=0.7174;ERATE=0.0006;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16413870 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.983;LDAF=0.6787;AVGPOST=0.9622;RSQ=0.9376;ERATE=0.0045;THETA=0.0009;AC=1494;AN=2184 GT:DS:GL:BD 0.68406594 1
1 16413967 . G GA 719 PASS INDEL;BAVGPOST=0.926;BRSQ=0.487;LDAF=0.1122;AVGPOST=0.8778;RSQ=0.4786;ERATE=0.0312;THETA=0.0024;AC=144;AN=2184 GT:DS:GL:BD 0.06593407 0
1 16413977 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4899;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16414088 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.6426;AVGPOST=0.9967;RSQ=0.9940;ERATE=0.0008;THETA=0.0005;AC=1403;AN=2184 GT:DS:GL:BD 0.64239925 1
1 16414189 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0100;AVGPOST=0.9992;RSQ=0.9694;ERATE=0.0004;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 16414244 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.0394;AVGPOST=0.9988;RSQ=0.9879;ERATE=0.0005;THETA=0.0010;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 16414283 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16414291 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.6910;AVGPOST=0.9909;RSQ=0.9838;ERATE=0.0009;THETA=0.0004;AC=1512;AN=2184 GT:DS:GL:BD 0.69230771 1
1 16414367 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8250;ERATE=0.0005;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16414488 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0031;AVGPOST=0.9987;RSQ=0.8351;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16414497 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0847;AVGPOST=0.9984;RSQ=0.9915;ERATE=0.0003;THETA=0.0005;AC=184;AN=2184 GT:DS:GL:BD 0.08424909 0
1 16414526 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6452;AVGPOST=0.9966;RSQ=0.9940;ERATE=0.0006;THETA=0.0006;AC=1408;AN=2184 GT:DS:GL:BD 0.64468867 1
1 16414533 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0049;AVGPOST=0.9982;RSQ=0.8429;ERATE=0.0004;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16414544 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0339;AVGPOST=0.9983;RSQ=0.9776;ERATE=0.0004;THETA=0.0006;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 16414611 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.890;LDAF=0.0194;AVGPOST=0.9883;RSQ=0.7940;ERATE=0.0011;THETA=0.0029;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 16414612 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0064;AVGPOST=0.9939;RSQ=0.6250;ERATE=0.0008;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16414639 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6093;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16414693 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8165;ERATE=0.0004;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16414732 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6171;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16414773 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9495;ERATE=0.0004;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16414774 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0133;AVGPOST=0.9999;RSQ=0.9950;ERATE=0.0003;THETA=0.0007;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 16414782 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4903;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16414784 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4582;AVGPOST=0.9979;RSQ=0.9971;ERATE=0.0006;THETA=0.0004;AC=1000;AN=2184 GT:DS:GL:BD 0.45787546 0
1 16414920 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.689;LDAF=0.0020;AVGPOST=0.9969;RSQ=0.3462;ERATE=0.0011;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16415069 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1560;AVGPOST=0.9968;RSQ=0.9913;ERATE=0.0004;THETA=0.0003;AC=340;AN=2184 GT:DS:GL:BD 0.15567766 0
1 16415139 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0021;AVGPOST=0.9974;RSQ=0.5032;ERATE=0.0009;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16415268 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0020;AVGPOST=0.9980;RSQ=0.6192;ERATE=0.0007;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16415294 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0175;AVGPOST=0.9997;RSQ=0.9927;ERATE=0.0004;THETA=0.0011;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 16415298 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.5867;ERATE=0.0007;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16415341 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.8023;AVGPOST=0.9980;RSQ=0.9956;ERATE=0.0004;THETA=0.0004;AC=1751;AN=2184 GT:DS:GL:BD 0.80173993 1
1 16415348 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.645;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4641;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16415349 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16415441 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0133;AVGPOST=1.0000;RSQ=0.9983;ERATE=0.0003;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 16415463 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9201;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16415589 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2835;AVGPOST=0.9829;RSQ=0.9710;ERATE=0.0027;THETA=0.0007;AC=612;AN=2184 GT:DS:GL:BD 0.28021979 0
1 16415661 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1505;AVGPOST=0.9991;RSQ=0.9971;ERATE=0.0005;THETA=0.0008;AC=328;AN=2184 GT:DS:GL:BD 0.15018316 0
1 16415678 . CAG C 216 PASS INDEL;BAVGPOST=0.998;BRSQ=0.796;LDAF=0.0042;AVGPOST=0.9983;RSQ=0.8356;ERATE=0.0003;THETA=0.0011;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16415767 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5501;AVGPOST=0.9973;RSQ=0.9959;ERATE=0.0006;THETA=0.0004;AC=1201;AN=2184 GT:DS:GL:BD 0.54990840 1
1 16415896 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0801;AVGPOST=0.9985;RSQ=0.9919;ERATE=0.0003;THETA=0.0002;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 16415937 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0040;AVGPOST=0.9991;RSQ=0.9185;ERATE=0.0003;THETA=0.0011;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16416014 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1510;AVGPOST=0.9984;RSQ=0.9951;ERATE=0.0005;THETA=0.0004;AC=328;AN=2184 GT:DS:GL:BD 0.15018316 0
1 16416028 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8187;ERATE=0.0007;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16416135 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.671;LDAF=0.0017;AVGPOST=0.9977;RSQ=0.4303;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16416142 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.960;LDAF=0.4921;AVGPOST=0.9829;RSQ=0.9768;ERATE=0.0009;THETA=0.0004;AC=1083;AN=2184 GT:DS:GL:BD 0.49587911 0
1 16416168 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.908;BRSQ=0.845;LDAF=0.4741;AVGPOST=0.8946;RSQ=0.8517;ERATE=0.0127;THETA=0.0006;AC=1051;AN=2184 GT:DS:GL:BD 0.48122710 0
1 16416183 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0156;AVGPOST=0.9947;RSQ=0.8739;ERATE=0.0005;THETA=0.0007;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 16416225 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0053;AVGPOST=0.9985;RSQ=0.8903;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16416261 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.680;LDAF=0.0558;AVGPOST=0.9450;RSQ=0.5883;ERATE=0.0079;THETA=0.0004;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 16416340 rs113335770 GGAAA G 19885 PASS INDEL;BAVGPOST=0.976;BRSQ=0.961;LDAF=0.4990;AVGPOST=0.9352;RSQ=0.9153;ERATE=0.0084;THETA=0.0004;AC=1091;AN=2184 GT:DS:GL:BD 0.49954212 0
1 16416439 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4835;AVGPOST=0.9936;RSQ=0.9912;ERATE=0.0010;THETA=0.0004;AC=1056;AN=2184 GT:DS:GL:BD 0.48351648 0
1 16416482 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.992;LDAF=0.4525;AVGPOST=0.9908;RSQ=0.9883;ERATE=0.0010;THETA=0.0004;AC=990;AN=2184 GT:DS:GL:BD 0.45329669 0
1 16416575 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.909;LDAF=0.0088;AVGPOST=0.9975;RSQ=0.9020;ERATE=0.0004;THETA=0.0011;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 16416588 . G GTC 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5540;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16416638 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0087;AVGPOST=0.9987;RSQ=0.9430;ERATE=0.0004;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 16416671 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0308;AVGPOST=0.9975;RSQ=0.9670;ERATE=0.0005;THETA=0.0005;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 16416819 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.899;LDAF=0.0062;AVGPOST=0.9985;RSQ=0.8971;ERATE=0.0003;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 16416839 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.753;LDAF=0.0014;AVGPOST=0.9993;RSQ=0.8002;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16417003 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9049;ERATE=0.0003;THETA=0.0023;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16417011 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0094;AVGPOST=0.9995;RSQ=0.9774;ERATE=0.0004;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 16417026 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4842;AVGPOST=0.9983;RSQ=0.9976;ERATE=0.0005;THETA=0.0004;AC=1057;AN=2184 GT:DS:GL:BD 0.48397437 0
1 16417171 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1001;AVGPOST=0.9995;RSQ=0.9975;ERATE=0.0004;THETA=0.0005;AC=219;AN=2184 GT:DS:GL:BD 0.10027473 0
1 16417216 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0026;AVGPOST=0.9991;RSQ=0.8519;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16417241 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0025;AVGPOST=0.9992;RSQ=0.8981;ERATE=0.0003;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16417356 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0133;AVGPOST=0.9997;RSQ=0.9904;ERATE=0.0003;THETA=0.0007;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 16417426 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1133;AVGPOST=0.9995;RSQ=0.9979;ERATE=0.0004;THETA=0.0002;AC=247;AN=2184 GT:DS:GL:BD 0.11309524 0
1 16417553 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.840;LDAF=0.0057;AVGPOST=0.9979;RSQ=0.8458;ERATE=0.0005;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16417579 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9905;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16417623 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8126;AVGPOST=0.9968;RSQ=0.9932;ERATE=0.0004;THETA=0.0009;AC=1776;AN=2184 GT:DS:GL:BD 0.81318682 1
1 16417765 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8156;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16417817 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5571;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16417956 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0029;AVGPOST=0.9970;RSQ=0.6263;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16417972 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5582;ERATE=0.0004;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16417992 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4475;AVGPOST=0.9968;RSQ=0.9956;ERATE=0.0007;THETA=0.0005;AC=976;AN=2184 GT:DS:GL:BD 0.44688645 0
1 16418025 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9486;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16418113 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8611;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16418128 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9149;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16418135 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.577;LDAF=0.0029;AVGPOST=0.9968;RSQ=0.5695;ERATE=0.0006;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16418194 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.668;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.5263;ERATE=0.0005;THETA=0.0025;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16418235 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0049;AVGPOST=0.9985;RSQ=0.8598;ERATE=0.0005;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16418277 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5682;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16418285 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.5973;AVGPOST=0.9962;RSQ=0.9945;ERATE=0.0006;THETA=0.0004;AC=1305;AN=2184 GT:DS:GL:BD 0.59752744 1
1 16418369 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5149;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16418373 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6700;ERATE=0.0006;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16418582 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1315;AVGPOST=0.9973;RSQ=0.9902;ERATE=0.0004;THETA=0.0007;AC=288;AN=2184 GT:DS:GL:BD 0.13186814 0
1 16418598 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.987;LDAF=0.7867;AVGPOST=0.9946;RSQ=0.9882;ERATE=0.0007;THETA=0.0125;AC=1722;AN=2184 GT:DS:GL:BD 0.78846157 1
1 16418614 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6965;ERATE=0.0008;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16418615 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6457;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16418650 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8801;ERATE=0.0003;THETA=0.0030;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16418679 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6745;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16418815 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.860;LDAF=0.0037;AVGPOST=0.9985;RSQ=0.8294;ERATE=0.0004;THETA=0.0043;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16418835 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0033;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16418987 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.6086;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16419077 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.679;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7446;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16419219 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1435;AVGPOST=0.9968;RSQ=0.9903;ERATE=0.0004;THETA=0.0007;AC=311;AN=2184 GT:DS:GL:BD 0.14239927 0
1 16419221 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9159;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16419237 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.677;LDAF=0.0022;AVGPOST=0.9976;RSQ=0.5255;ERATE=0.0008;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16419360 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.0058;AVGPOST=0.9984;RSQ=0.8789;ERATE=0.0003;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 16419363 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7202;ERATE=0.0009;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16419414 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.917;LDAF=0.0127;AVGPOST=0.9956;RSQ=0.8701;ERATE=0.0005;THETA=0.0008;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 16419415 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.982;LDAF=0.1560;AVGPOST=0.9920;RSQ=0.9792;ERATE=0.0004;THETA=0.0027;AC=338;AN=2184 GT:DS:GL:BD 0.15476191 0
1 16419587 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0218;AVGPOST=0.9974;RSQ=0.9573;ERATE=0.0003;THETA=0.0011;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 16419589 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.992;LDAF=0.6293;AVGPOST=0.9869;RSQ=0.9819;ERATE=0.0021;THETA=0.0020;AC=1375;AN=2184 GT:DS:GL:BD 0.62957877 1
1 16419945 rs60467135 A AT 22 PASS INDEL;BAVGPOST=0.999;BRSQ=0.657;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7098;ERATE=0.0003;THETA=0.0070;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16420134 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5894;ERATE=0.0004;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16420244 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.793;LDAF=0.0056;AVGPOST=0.9983;RSQ=0.8610;ERATE=0.0005;THETA=0.0038;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16420516 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.548;LDAF=0.0063;AVGPOST=0.9951;RSQ=0.6851;ERATE=0.0008;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16420578 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1394;AVGPOST=0.9990;RSQ=0.9971;ERATE=0.0004;THETA=0.0063;AC=303;AN=2184 GT:DS:GL:BD 0.13873626 0
1 16420680 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0263;AVGPOST=0.9993;RSQ=0.9906;ERATE=0.0003;THETA=0.0012;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 16420755 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6768;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16420803 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0047;AVGPOST=0.9991;RSQ=0.9246;ERATE=0.0003;THETA=0.0099;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16420916 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.872;LDAF=0.0039;AVGPOST=0.9987;RSQ=0.8684;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16420988 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16421061 . GAGA G 380 PASS INDEL;BAVGPOST=0.999;BRSQ=0.767;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7921;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16421128 . CCCA C 106 PASS INDEL;BAVGPOST=0.979;BRSQ=0.434;LDAF=0.0390;AVGPOST=0.9465;RSQ=0.4204;ERATE=0.0074;THETA=0.0005;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 16421177 rs111696119 TCAC T 184 PASS INDEL;BAVGPOST=0.992;BRSQ=0.626;LDAF=0.0199;AVGPOST=0.9758;RSQ=0.4949;ERATE=0.0051;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 16421234 . CCACCACCGT C 1562 PASS INDEL;BAVGPOST=0.986;BRSQ=0.624;LDAF=0.0220;AVGPOST=0.9773;RSQ=0.5799;ERATE=0.0016;THETA=0.0018;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 16421252 . TCAC T 77 PASS INDEL;BAVGPOST=0.987;BRSQ=0.598;LDAF=0.0195;AVGPOST=0.9794;RSQ=0.5778;ERATE=0.0014;THETA=0.0125;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 16421374 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0026;AVGPOST=0.9975;RSQ=0.5847;ERATE=0.0011;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16421488 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.849;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8696;ERATE=0.0004;THETA=0.0022;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16421489 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8509;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16421760 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.984;LDAF=0.3625;AVGPOST=0.9702;RSQ=0.9514;ERATE=0.0022;THETA=0.0004;AC=799;AN=2184 GT:DS:GL:BD 0.36584249 0
1 16421775 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.937;LDAF=0.0186;AVGPOST=0.9965;RSQ=0.9267;ERATE=0.0005;THETA=0.0058;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 16422010 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.1080;AVGPOST=0.9975;RSQ=0.9902;ERATE=0.0003;THETA=0.0004;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 16422069 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6343;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16422086 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.856;LDAF=0.0060;AVGPOST=0.9984;RSQ=0.9119;ERATE=0.0003;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 16422181 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0090;AVGPOST=0.9995;RSQ=0.9704;ERATE=0.0004;THETA=0.0019;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 16422188 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5290;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16422220 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5357;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16422375 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0228;AVGPOST=0.9992;RSQ=0.9869;ERATE=0.0003;THETA=0.0005;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 16422426 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0184;AVGPOST=0.9990;RSQ=0.9811;ERATE=0.0003;THETA=0.0011;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 16422439 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.829;LDAF=0.0035;AVGPOST=0.9984;RSQ=0.8030;ERATE=0.0004;THETA=0.0012;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16422442 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5494;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16422512 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.546;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6494;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16422561 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8681;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16422575 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.5485;ERATE=0.0007;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16422596 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.725;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4367;ERATE=0.0005;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16422633 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.739;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.6969;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16422732 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0118;AVGPOST=0.9964;RSQ=0.8774;ERATE=0.0005;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 16422788 . CA C 8 PASS INDEL;BAVGPOST=0.999;BRSQ=0.503;LDAF=0.0020;AVGPOST=0.9970;RSQ=0.4557;ERATE=0.0007;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16422816 rs71003243 AC A 1562 PASS INDEL;BAVGPOST=0.870;BRSQ=0.537;LDAF=0.1617;AVGPOST=0.8599;RSQ=0.6130;ERATE=0.0300;THETA=0.0009;AC=268;AN=2184 GT:DS:GL:BD 0.12271062 0
1 16422928 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0438;AVGPOST=0.9997;RSQ=0.9965;ERATE=0.0003;THETA=0.0002;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 16422976 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16422985 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6527;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16423026 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8334;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16423085 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.889;LDAF=0.0072;AVGPOST=0.9988;RSQ=0.9412;ERATE=0.0004;THETA=0.0021;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 16423238 . A AT 99 PASS INDEL;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5576;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16423271 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5253;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16423292 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6196;ERATE=0.0003;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16423307 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0015;AVGPOST=0.9985;RSQ=0.6490;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16423588 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.890;LDAF=0.0272;AVGPOST=0.9914;RSQ=0.8798;ERATE=0.0005;THETA=0.0004;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 16423619 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0015;AVGPOST=0.9993;RSQ=0.8121;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16423660 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.896;LDAF=0.0061;AVGPOST=0.9972;RSQ=0.7996;ERATE=0.0007;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16423660 . C CGT 33 PASS INDEL;BAVGPOST=0.997;BRSQ=0.707;LDAF=0.0022;AVGPOST=0.9985;RSQ=0.6971;ERATE=0.0005;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16423699 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0438;AVGPOST=0.9990;RSQ=0.9909;ERATE=0.0004;THETA=0.0006;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 16423768 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1345;AVGPOST=0.9979;RSQ=0.9929;ERATE=0.0004;THETA=0.0007;AC=293;AN=2184 GT:DS:GL:BD 0.13415751 0
1 16423793 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0893;AVGPOST=0.9941;RSQ=0.9744;ERATE=0.0004;THETA=0.0005;AC=193;AN=2184 GT:DS:GL:BD 0.08836997 0
1 16423834 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1821;AVGPOST=0.9970;RSQ=0.9921;ERATE=0.0003;THETA=0.0009;AC=397;AN=2184 GT:DS:GL:BD 0.18177655 0
1 16424066 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0088;AVGPOST=0.9998;RSQ=0.9874;ERATE=0.0003;THETA=0.0008;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 16424085 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3434;AVGPOST=0.9946;RSQ=0.9925;ERATE=0.0008;THETA=0.0007;AC=749;AN=2184 GT:DS:GL:BD 0.34294870 0
1 16424121 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.909;LDAF=0.0092;AVGPOST=0.9985;RSQ=0.9382;ERATE=0.0003;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 16424228 . TG T 2039 PASS INDEL;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0114;AVGPOST=0.9971;RSQ=0.9024;ERATE=0.0004;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 16424236 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0022;AVGPOST=0.9991;RSQ=0.8064;ERATE=0.0004;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16424250 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6430;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16424348 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1346;AVGPOST=0.9989;RSQ=0.9965;ERATE=0.0003;THETA=0.0004;AC=293;AN=2184 GT:DS:GL:BD 0.13415751 0
1 16424408 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.782;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4733;ERATE=0.0006;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16424472 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6675;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16424498 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.714;LDAF=0.0045;AVGPOST=0.9957;RSQ=0.5992;ERATE=0.0005;THETA=0.0024;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16424534 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0028;AVGPOST=0.9996;RSQ=0.9309;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16424551 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0448;AVGPOST=0.9980;RSQ=0.9846;ERATE=0.0003;THETA=0.0008;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 16424612 . AAG A 27 PASS INDEL;BAVGPOST=0.999;BRSQ=0.607;LDAF=0.0022;AVGPOST=0.9968;RSQ=0.3937;ERATE=0.0009;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16424675 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16424846 . ATC A 9 PASS INDEL;BAVGPOST=0.998;BRSQ=0.696;LDAF=0.0078;AVGPOST=0.9903;RSQ=0.5406;ERATE=0.0017;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16424926 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0838;AVGPOST=0.9983;RSQ=0.9905;ERATE=0.0005;THETA=0.0007;AC=180;AN=2184 GT:DS:GL:BD 0.08241758 0
1 16424946 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1370;AVGPOST=0.9974;RSQ=0.9914;ERATE=0.0008;THETA=0.0018;AC=297;AN=2184 GT:DS:GL:BD 0.13598901 0
1 16425009 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0027;AVGPOST=0.9973;RSQ=0.6336;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16425047 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.685;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4371;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16425052 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.824;LDAF=0.0039;AVGPOST=0.9979;RSQ=0.7674;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16425168 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.839;LDAF=0.0142;AVGPOST=0.9953;RSQ=0.8540;ERATE=0.0006;THETA=0.0009;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 16425179 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.396;LDAF=0.0031;AVGPOST=0.9947;RSQ=0.2796;ERATE=0.0010;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16425299 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.646;LDAF=0.0050;AVGPOST=0.9947;RSQ=0.5482;ERATE=0.0008;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16425323 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1360;AVGPOST=0.9980;RSQ=0.9935;ERATE=0.0005;THETA=0.0007;AC=294;AN=2184 GT:DS:GL:BD 0.13461539 0
1 16425332 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.970;LDAF=0.0082;AVGPOST=0.9991;RSQ=0.9472;ERATE=0.0004;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 16425343 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1824;AVGPOST=0.9979;RSQ=0.9942;ERATE=0.0004;THETA=0.0004;AC=398;AN=2184 GT:DS:GL:BD 0.18223444 0
1 16425404 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.771;LDAF=0.0243;AVGPOST=0.9844;RSQ=0.7568;ERATE=0.0003;THETA=0.0007;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 16425480 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.736;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6262;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16425506 rs111888572 GGGA G 49243 PASS INDEL;BAVGPOST=0.982;BRSQ=0.974;LDAF=0.5227;AVGPOST=0.9790;RSQ=0.9736;ERATE=0.0034;THETA=0.0004;AC=1144;AN=2184 GT:DS:GL:BD 0.52380955 1
1 16425511 rs58209865 GA G 6915 PASS INDEL;BAVGPOST=0.882;BRSQ=0.805;LDAF=0.4055;AVGPOST=0.8445;RSQ=0.7831;ERATE=0.0284;THETA=0.0011;AC=931;AN=2184 GT:DS:GL:BD 0.42628205 0
1 16425533 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5771;ERATE=0.0003;THETA=0.0050;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16425578 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0004;AVGPOST=0.9997;RSQ=0.6813;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16425590 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1358;AVGPOST=0.9994;RSQ=0.9978;ERATE=0.0003;THETA=0.0005;AC=295;AN=2184 GT:DS:GL:BD 0.13507326 0
1 16425660 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7393;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16425789 . T TG 18 PASS INDEL;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0011;AVGPOST=0.9984;RSQ=0.3674;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16425820 rs111431645 GAGCAGCT G 29160 PASS INDEL;BAVGPOST=0.987;BRSQ=0.961;LDAF=0.1798;AVGPOST=0.9947;RSQ=0.9864;ERATE=0.0005;THETA=0.0008;AC=396;AN=2184 GT:DS:GL:BD 0.18131869 0
1 16425876 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0080;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16425882 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2020;AVGPOST=0.9975;RSQ=0.9944;ERATE=0.0004;THETA=0.0003;AC=443;AN=2184 GT:DS:GL:BD 0.20283882 0
1 16425900 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.5274;AVGPOST=0.9971;RSQ=0.9960;ERATE=0.0006;THETA=0.0004;AC=1152;AN=2184 GT:DS:GL:BD 0.52747256 1
1 16425923 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16425933 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0420;AVGPOST=0.9977;RSQ=0.9839;ERATE=0.0003;THETA=0.0009;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 16426019 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9330;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16426139 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.910;LDAF=0.0476;AVGPOST=0.9895;RSQ=0.9215;ERATE=0.0003;THETA=0.0004;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 16426342 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1819;AVGPOST=0.9996;RSQ=0.9988;ERATE=0.0004;THETA=0.0004;AC=398;AN=2184 GT:DS:GL:BD 0.18223444 0
1 16426369 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5464;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16426391 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1809;AVGPOST=0.9990;RSQ=0.9973;ERATE=0.0005;THETA=0.0008;AC=396;AN=2184 GT:DS:GL:BD 0.18131869 0
1 16426444 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.5959;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16426468 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0022;AVGPOST=0.9977;RSQ=0.5811;ERATE=0.0005;THETA=0.0016;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16426481 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8523;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16426514 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1808;AVGPOST=0.9991;RSQ=0.9976;ERATE=0.0004;THETA=0.0005;AC=396;AN=2184 GT:DS:GL:BD 0.18131869 0
1 16426548 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0031;AVGPOST=0.9984;RSQ=0.7854;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16426576 rs55878184 C CTA 20753 PASS INDEL;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1354;AVGPOST=0.9972;RSQ=0.9910;ERATE=0.0007;THETA=0.0003;AC=293;AN=2184 GT:DS:GL:BD 0.13415751 0
1 16426655 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3920;AVGPOST=0.9990;RSQ=0.9983;ERATE=0.0004;THETA=0.0004;AC=858;AN=2184 GT:DS:GL:BD 0.39285713 0
1 16426820 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5867;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16426904 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1820;AVGPOST=0.9995;RSQ=0.9984;ERATE=0.0004;THETA=0.0003;AC=398;AN=2184 GT:DS:GL:BD 0.18223444 0
1 16426919 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16427013 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9230;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16427214 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.976;LDAF=0.1808;AVGPOST=0.9959;RSQ=0.9901;ERATE=0.0004;THETA=0.0005;AC=398;AN=2184 GT:DS:GL:BD 0.18223444 0
1 16427240 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.980;LDAF=0.3874;AVGPOST=0.9929;RSQ=0.9890;ERATE=0.0007;THETA=0.0004;AC=851;AN=2184 GT:DS:GL:BD 0.38965201 0
1 16427296 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.977;LDAF=0.3851;AVGPOST=0.9899;RSQ=0.9847;ERATE=0.0008;THETA=0.0004;AC=844;AN=2184 GT:DS:GL:BD 0.38644689 0
1 16427368 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.969;LDAF=0.1687;AVGPOST=0.9901;RSQ=0.9762;ERATE=0.0006;THETA=0.0004;AC=371;AN=2184 GT:DS:GL:BD 0.16987179 0
1 16427369 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.970;LDAF=0.1681;AVGPOST=0.9901;RSQ=0.9771;ERATE=0.0004;THETA=0.0003;AC=369;AN=2184 GT:DS:GL:BD 0.16895604 0
1 16427498 rs35861158 C CAAAA 20920 PASS INDEL;BAVGPOST=0.951;BRSQ=0.899;LDAF=0.3341;AVGPOST=0.9349;RSQ=0.8923;ERATE=0.0288;THETA=0.0003;AC=740;AN=2184 GT:DS:GL:BD 0.33882785 0
1 16427508 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.762;LDAF=0.0023;AVGPOST=0.9982;RSQ=0.7147;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16427694 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.723;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5790;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16427695 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.3913;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16427704 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2069;AVGPOST=0.9969;RSQ=0.9932;ERATE=0.0005;THETA=0.0010;AC=452;AN=2184 GT:DS:GL:BD 0.20695971 0
1 16427737 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.979;LDAF=0.2031;AVGPOST=0.9909;RSQ=0.9799;ERATE=0.0010;THETA=0.0007;AC=444;AN=2184 GT:DS:GL:BD 0.20329671 0
1 16427778 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.774;LDAF=0.0024;AVGPOST=0.9969;RSQ=0.4211;ERATE=0.0010;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16427911 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.1820;AVGPOST=0.9990;RSQ=0.9971;ERATE=0.0004;THETA=0.0003;AC=398;AN=2184 GT:DS:GL:BD 0.18223444 0
1 16428072 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6141;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16428249 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0037;AVGPOST=0.9991;RSQ=0.8918;ERATE=0.0005;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16428269 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.704;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6527;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16428270 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0204;AVGPOST=0.9988;RSQ=0.9734;ERATE=0.0003;THETA=0.0006;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 16428306 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1820;AVGPOST=0.9995;RSQ=0.9987;ERATE=0.0004;THETA=0.0009;AC=398;AN=2184 GT:DS:GL:BD 0.18223444 0
1 16428331 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0047;AVGPOST=0.9987;RSQ=0.8812;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16428399 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0235;AVGPOST=0.9985;RSQ=0.9758;ERATE=0.0003;THETA=0.0025;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 16428508 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0421;AVGPOST=0.9979;RSQ=0.9857;ERATE=0.0003;THETA=0.0004;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 16428538 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1822;AVGPOST=0.9989;RSQ=0.9972;ERATE=0.0004;THETA=0.0002;AC=399;AN=2184 GT:DS:GL:BD 0.18269230 0
1 16428626 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1819;AVGPOST=0.9981;RSQ=0.9951;ERATE=0.0006;THETA=0.0011;AC=399;AN=2184 GT:DS:GL:BD 0.18269230 0
1 16428706 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.971;LDAF=0.1852;AVGPOST=0.9915;RSQ=0.9792;ERATE=0.0022;THETA=0.0003;AC=404;AN=2184 GT:DS:GL:BD 0.18498169 0
1 16428722 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0469;AVGPOST=0.9994;RSQ=0.9949;ERATE=0.0004;THETA=0.0005;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 16428728 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.959;LDAF=0.1809;AVGPOST=0.9958;RSQ=0.9895;ERATE=0.0005;THETA=0.0006;AC=399;AN=2184 GT:DS:GL:BD 0.18269230 0
1 16428753 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.973;LDAF=0.1768;AVGPOST=0.9959;RSQ=0.9906;ERATE=0.0003;THETA=0.0005;AC=386;AN=2184 GT:DS:GL:BD 0.17673993 0
1 16428758 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.976;LDAF=0.1770;AVGPOST=0.9932;RSQ=0.9849;ERATE=0.0005;THETA=0.0032;AC=386;AN=2184 GT:DS:GL:BD 0.17673993 0
1 16428771 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6629;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16428911 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.0901;AVGPOST=0.9979;RSQ=0.9893;ERATE=0.0005;THETA=0.0005;AC=196;AN=2184 GT:DS:GL:BD 0.08974359 0
1 16428972 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1842;AVGPOST=0.9981;RSQ=0.9952;ERATE=0.0005;THETA=0.0009;AC=403;AN=2184 GT:DS:GL:BD 0.18452381 0
1 16429004 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5979;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16429042 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1819;AVGPOST=0.9990;RSQ=0.9972;ERATE=0.0003;THETA=0.0005;AC=398;AN=2184 GT:DS:GL:BD 0.18223444 0
1 16429085 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.5259;AVGPOST=0.9943;RSQ=0.9919;ERATE=0.0012;THETA=0.0010;AC=1152;AN=2184 GT:DS:GL:BD 0.52747256 1
1 16429164 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6409;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16429175 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0035;AVGPOST=0.9991;RSQ=0.8933;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16429177 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.808;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8407;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16429190 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0064;AVGPOST=0.9995;RSQ=0.9686;ERATE=0.0003;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 16429312 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6261;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16429327 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.984;LDAF=0.1691;AVGPOST=0.9921;RSQ=0.9822;ERATE=0.0003;THETA=0.0004;AC=370;AN=2184 GT:DS:GL:BD 0.16941392 0
1 16429328 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.987;LDAF=0.4243;AVGPOST=0.9921;RSQ=0.9894;ERATE=0.0005;THETA=0.0003;AC=930;AN=2184 GT:DS:GL:BD 0.42582417 0
1 16429387 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0083;AVGPOST=0.9998;RSQ=0.9894;ERATE=0.0003;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 16429439 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.963;LDAF=0.0319;AVGPOST=0.9941;RSQ=0.9245;ERATE=0.0004;THETA=0.0008;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 16429443 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.796;LDAF=0.0088;AVGPOST=0.9948;RSQ=0.7798;ERATE=0.0004;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 16429455 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1815;AVGPOST=0.9983;RSQ=0.9960;ERATE=0.0004;THETA=0.0005;AC=398;AN=2184 GT:DS:GL:BD 0.18223444 0
1 16429632 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0360;AVGPOST=0.9994;RSQ=0.9929;ERATE=0.0004;THETA=0.0006;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 16429702 MERGED_DEL_2_1909 CCACAACCTTCCAGCATGGGCTTTATGGCCATCATGAACATGTCACAGTGCTGCAGAGATTTTGTTTATGGCCAGTTTTGGGGCCAGTTTATGGCCAGATTTTGGGGGGCCTGCTCCCAACATGTCCCCATTCTTTGATTTGCAAATCGATAAACGCAAAGGCAGCTTTGTCACGGTGAGCTACTTCTCA C . . SV;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0205;AVGPOST=0.9988;RSQ=0.9750;ERATE=0.0004;THETA=0.0003;CIEND=-71,82;CIPOS=-93,64;END=16435186;HOMLEN=121;HOMSEQ=CACAACCTTCCAGCATGGGCTTTATGGCCATCATGAACAT GT:DS:GL:BD 0.02014652 0
1 16429705 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.765;LDAF=0.0507;AVGPOST=0.9703;RSQ=0.7781;ERATE=0.0006;THETA=0.0042;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 16429749 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1838;AVGPOST=0.9970;RSQ=0.9927;ERATE=0.0005;THETA=0.0007;AC=401;AN=2184 GT:DS:GL:BD 0.18360806 0
1 16429781 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0009;AVGPOST=0.9984;RSQ=0.2311;ERATE=0.0005;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 16429784 . GCCA G 38 PASS INDEL;BAVGPOST=0.994;BRSQ=0.133;LDAF=0.0037;AVGPOST=0.9957;RSQ=0.5309;ERATE=0.0006;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16429850 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.495;LDAF=0.0104;AVGPOST=0.9881;RSQ=0.5580;ERATE=0.0024;THETA=0.0011;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 16429875 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.758;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.6963;ERATE=0.0006;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16429893 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1850;AVGPOST=0.9985;RSQ=0.9963;ERATE=0.0003;THETA=0.0008;AC=404;AN=2184 GT:DS:GL:BD 0.18498169 0
1 16429900 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1848;AVGPOST=0.9987;RSQ=0.9968;ERATE=0.0003;THETA=0.0004;AC=404;AN=2184 GT:DS:GL:BD 0.18498169 0
1 16429978 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7417;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16430010 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0486;AVGPOST=0.9972;RSQ=0.9832;ERATE=0.0003;THETA=0.0008;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 16430048 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0452;AVGPOST=0.9985;RSQ=0.9857;ERATE=0.0003;THETA=0.0014;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 16430061 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.855;LDAF=0.0053;AVGPOST=0.9976;RSQ=0.8009;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16430239 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8601;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16430280 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0099;AVGPOST=0.9975;RSQ=0.9056;ERATE=0.0004;THETA=0.0001;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 16430309 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.8248;ERATE=0.0005;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16430366 . A AT 7737 PASS INDEL;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0472;AVGPOST=0.9966;RSQ=0.9774;ERATE=0.0005;THETA=0.0004;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 16430373 . CTA C 167 PASS INDEL;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0019;AVGPOST=0.9977;RSQ=0.5544;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16430375 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.917;LDAF=0.0144;AVGPOST=0.9971;RSQ=0.9125;ERATE=0.0003;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 16430425 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.977;LDAF=0.1842;AVGPOST=0.9973;RSQ=0.9931;ERATE=0.0005;THETA=0.0004;AC=405;AN=2184 GT:DS:GL:BD 0.18543956 0
1 16430513 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.730;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7632;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16430595 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.745;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4261;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16430683 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8704;ERATE=0.0004;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16430707 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.965;LDAF=0.4465;AVGPOST=0.9915;RSQ=0.9888;ERATE=0.0007;THETA=0.0006;AC=982;AN=2184 GT:DS:GL:BD 0.44963369 0
1 16430708 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4532;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16430773 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.951;LDAF=0.1689;AVGPOST=0.9828;RSQ=0.9613;ERATE=0.0006;THETA=0.0006;AC=373;AN=2184 GT:DS:GL:BD 0.17078754 0
1 16430775 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.946;LDAF=0.1731;AVGPOST=0.9736;RSQ=0.9406;ERATE=0.0013;THETA=0.0003;AC=379;AN=2184 GT:DS:GL:BD 0.17353480 0
1 16430789 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.951;LDAF=0.1682;AVGPOST=0.9823;RSQ=0.9589;ERATE=0.0007;THETA=0.0005;AC=373;AN=2184 GT:DS:GL:BD 0.17078754 0
1 16430793 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0039;AVGPOST=0.9979;RSQ=0.7658;ERATE=0.0005;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16430954 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.6111;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16430979 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.786;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7376;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16430990 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9124;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16431087 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.988;LDAF=0.4492;AVGPOST=0.9953;RSQ=0.9938;ERATE=0.0004;THETA=0.0004;AC=984;AN=2184 GT:DS:GL:BD 0.45054945 0
1 16431122 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1847;AVGPOST=0.9975;RSQ=0.9941;ERATE=0.0004;THETA=0.0005;AC=405;AN=2184 GT:DS:GL:BD 0.18543956 0
1 16431132 . TG T 564 PASS INDEL;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8704;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16431215 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0064;AVGPOST=0.9978;RSQ=0.8625;ERATE=0.0005;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 16431272 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.761;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9107;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16431305 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.939;LDAF=0.1822;AVGPOST=0.9929;RSQ=0.9832;ERATE=0.0005;THETA=0.0006;AC=403;AN=2184 GT:DS:GL:BD 0.18452381 0
1 16431327 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0460;AVGPOST=0.9972;RSQ=0.9783;ERATE=0.0005;THETA=0.0004;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 16431400 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.988;LDAF=0.1841;AVGPOST=0.9961;RSQ=0.9919;ERATE=0.0005;THETA=0.0005;AC=405;AN=2184 GT:DS:GL:BD 0.18543956 0
1 16431402 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.674;LDAF=0.0256;AVGPOST=0.9746;RSQ=0.6152;ERATE=0.0077;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 16431444 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.5504;AVGPOST=0.9962;RSQ=0.9951;ERATE=0.0004;THETA=0.0004;AC=1203;AN=2184 GT:DS:GL:BD 0.55082417 1
1 16431744 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1854;AVGPOST=0.9983;RSQ=0.9960;ERATE=0.0003;THETA=0.0004;AC=405;AN=2184 GT:DS:GL:BD 0.18543956 0
1 16431770 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9994;RSQ=0.9002;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16431839 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.988;LDAF=0.1938;AVGPOST=0.9857;RSQ=0.9693;ERATE=0.0050;THETA=0.0006;AC=420;AN=2184 GT:DS:GL:BD 0.19230770 0
1 16431960 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.1866;AVGPOST=0.9971;RSQ=0.9929;ERATE=0.0006;THETA=0.0004;AC=407;AN=2184 GT:DS:GL:BD 0.18635531 0
1 16432148 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.931;LDAF=0.0047;AVGPOST=0.9989;RSQ=0.9044;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16432222 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6841;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16432224 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4905;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16432263 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.727;LDAF=0.0155;AVGPOST=0.9883;RSQ=0.6929;ERATE=0.0020;THETA=0.0009;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 16432291 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.837;LDAF=0.0048;AVGPOST=0.9950;RSQ=0.6010;ERATE=0.0007;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16432509 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0462;AVGPOST=0.9976;RSQ=0.9835;ERATE=0.0004;THETA=0.0004;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 16432579 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.1851;AVGPOST=0.9987;RSQ=0.9965;ERATE=0.0004;THETA=0.0005;AC=405;AN=2184 GT:DS:GL:BD 0.18543956 0
1 16432581 . C CTA 311 PASS INDEL;BAVGPOST=0.994;BRSQ=0.674;LDAF=0.0127;AVGPOST=0.9902;RSQ=0.6915;ERATE=0.0006;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 16432658 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0211;AVGPOST=0.9966;RSQ=0.9396;ERATE=0.0004;THETA=0.0003;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 16432754 . T TC 286 PASS INDEL;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8757;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16432790 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.969;LDAF=0.0551;AVGPOST=0.9956;RSQ=0.9700;ERATE=0.0004;THETA=0.0002;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 16432819 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.828;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.6960;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16432895 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4483;AVGPOST=0.9949;RSQ=0.9931;ERATE=0.0007;THETA=0.0003;AC=984;AN=2184 GT:DS:GL:BD 0.45054945 0
1 16432913 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.972;LDAF=0.0715;AVGPOST=0.9965;RSQ=0.9805;ERATE=0.0003;THETA=0.0003;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 16432914 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8519;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16432926 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0457;AVGPOST=0.9996;RSQ=0.9964;ERATE=0.0003;THETA=0.0004;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 16432930 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8908;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16432955 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0084;AVGPOST=0.9992;RSQ=0.9674;ERATE=0.0003;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 16432984 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.4480;AVGPOST=0.9972;RSQ=0.9962;ERATE=0.0003;THETA=0.0030;AC=981;AN=2184 GT:DS:GL:BD 0.44917583 0
1 16433139 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0457;AVGPOST=0.9966;RSQ=0.9754;ERATE=0.0004;THETA=0.0005;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 16433177 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.4033;AVGPOST=0.9957;RSQ=0.9936;ERATE=0.0005;THETA=0.0005;AC=882;AN=2184 GT:DS:GL:BD 0.40384614 0
1 16433182 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.1077;AVGPOST=0.9973;RSQ=0.9895;ERATE=0.0003;THETA=0.0005;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 16433217 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5647;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16433306 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.4029;AVGPOST=0.9962;RSQ=0.9942;ERATE=0.0004;THETA=0.0004;AC=882;AN=2184 GT:DS:GL:BD 0.40384614 0
1 16433345 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0460;AVGPOST=0.9986;RSQ=0.9870;ERATE=0.0005;THETA=0.0005;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 16433350 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.5621;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16433365 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.931;LDAF=0.0067;AVGPOST=0.9977;RSQ=0.8646;ERATE=0.0004;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 16433482 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0455;AVGPOST=0.9992;RSQ=0.9924;ERATE=0.0003;THETA=0.0007;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 16433486 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0102;AVGPOST=0.9969;RSQ=0.9049;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 16433515 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0031;AVGPOST=0.9973;RSQ=0.6666;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16433678 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.5443;AVGPOST=0.9910;RSQ=0.9888;ERATE=0.0009;THETA=0.0005;AC=1194;AN=2184 GT:DS:GL:BD 0.54670328 1
1 16433941 . C CA 100 PASS INDEL;BAVGPOST=0.999;BRSQ=0.741;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7090;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16433974 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0027;AVGPOST=0.9978;RSQ=0.6749;ERATE=0.0006;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16434219 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.946;LDAF=0.2266;AVGPOST=0.9903;RSQ=0.9816;ERATE=0.0008;THETA=0.0008;AC=497;AN=2184 GT:DS:GL:BD 0.22756410 0
1 16434221 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.734;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8213;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16434264 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0079;AVGPOST=0.9980;RSQ=0.9016;ERATE=0.0005;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16434274 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.982;LDAF=0.0476;AVGPOST=0.9963;RSQ=0.9757;ERATE=0.0005;THETA=0.0004;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 16434278 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0093;AVGPOST=0.9986;RSQ=0.9441;ERATE=0.0003;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 16434295 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0025;AVGPOST=0.9993;RSQ=0.8639;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16434349 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5205;ERATE=0.0004;THETA=0.0048;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16434362 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8894;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16434602 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.9056;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16434666 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.696;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7039;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16434686 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0441;AVGPOST=0.9979;RSQ=0.9853;ERATE=0.0003;THETA=0.0008;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 16434705 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.975;LDAF=0.0288;AVGPOST=0.9981;RSQ=0.9789;ERATE=0.0004;THETA=0.0009;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 16434711 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1854;AVGPOST=0.9964;RSQ=0.9914;ERATE=0.0005;THETA=0.0007;AC=405;AN=2184 GT:DS:GL:BD 0.18543956 0
1 16434827 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0026;AVGPOST=0.9980;RSQ=0.7170;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16434836 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5768;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16434904 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0442;AVGPOST=0.9979;RSQ=0.9859;ERATE=0.0004;THETA=0.0003;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 16435091 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.771;LDAF=0.0031;AVGPOST=0.9966;RSQ=0.5986;ERATE=0.0003;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16435135 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.571;LDAF=0.0160;AVGPOST=0.9836;RSQ=0.5917;ERATE=0.0044;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 16435144 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.611;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.5650;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16435235 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0032;AVGPOST=0.9982;RSQ=0.7556;ERATE=0.0004;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16435376 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.931;LDAF=0.0066;AVGPOST=0.9978;RSQ=0.8608;ERATE=0.0003;THETA=0.0035;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 16435377 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4106;AVGPOST=0.9973;RSQ=0.9958;ERATE=0.0008;THETA=0.0036;AC=898;AN=2184 GT:DS:GL:BD 0.41117215 0
1 16435433 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0027;AVGPOST=0.9969;RSQ=0.5560;ERATE=0.0005;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16435434 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4428;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16435523 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0030;AVGPOST=0.9993;RSQ=0.8922;ERATE=0.0004;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16435673 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.581;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16435816 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1084;AVGPOST=0.9976;RSQ=0.9905;ERATE=0.0005;THETA=0.0007;AC=237;AN=2184 GT:DS:GL:BD 0.10851648 0
1 16435959 . GAGC G 66 PASS INDEL;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0032;AVGPOST=0.9973;RSQ=0.6491;ERATE=0.0014;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16435999 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7031;ERATE=0.0004;THETA=0.0023;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16436178 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.917;LDAF=0.0174;AVGPOST=0.9972;RSQ=0.9389;ERATE=0.0004;THETA=0.0017;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 16436437 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1174;AVGPOST=0.9975;RSQ=0.9908;ERATE=0.0003;THETA=0.0011;AC=257;AN=2184 GT:DS:GL:BD 0.11767399 0
1 16436465 . AG A 2753 PASS INDEL;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0195;AVGPOST=0.9978;RSQ=0.9576;ERATE=0.0003;THETA=0.0005;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 16436466 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0003;THETA=0.0031;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16436580 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0104;AVGPOST=0.9992;RSQ=0.9653;ERATE=0.0004;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 16436651 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7653;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16436723 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8552;ERATE=0.0005;THETA=0.0025;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16436960 rs60346918 AG A 8131 PASS INDEL;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0436;AVGPOST=0.9989;RSQ=0.9911;ERATE=0.0004;THETA=0.0066;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 16437063 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6474;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16437078 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16437109 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8613;ERATE=0.0007;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16437130 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6529;ERATE=0.0003;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16437139 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.732;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7667;ERATE=0.0003;THETA=0.0020;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16437233 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8525;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16437298 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.997;LDAF=0.4105;AVGPOST=0.9941;RSQ=0.9916;ERATE=0.0004;THETA=0.0007;AC=898;AN=2184 GT:DS:GL:BD 0.41117215 0
1 16437314 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0015;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16437369 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.892;LDAF=0.0077;AVGPOST=0.9978;RSQ=0.8951;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16437390 . TG T 60 PASS INDEL;BAVGPOST=1.000;BRSQ=0.723;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.5703;ERATE=0.0005;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16437403 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9335;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16437409 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0410;AVGPOST=0.9992;RSQ=0.9921;ERATE=0.0003;THETA=0.0029;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 16437411 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.850;LDAF=0.0053;AVGPOST=0.9986;RSQ=0.8968;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 16437542 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5467;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16437609 . CT C 408 PASS INDEL;BAVGPOST=0.998;BRSQ=0.918;LDAF=0.0117;AVGPOST=0.9964;RSQ=0.8777;ERATE=0.0007;THETA=0.0026;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 16437704 . G GTCC 601 PASS INDEL;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0068;AVGPOST=0.9978;RSQ=0.8714;ERATE=0.0004;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16437726 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0078;AVGPOST=0.9967;RSQ=0.8385;ERATE=0.0004;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16437746 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.3910;AVGPOST=0.9878;RSQ=0.9804;ERATE=0.0029;THETA=0.0007;AC=855;AN=2184 GT:DS:GL:BD 0.39148352 0
1 16437857 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16438038 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.684;LDAF=0.0025;AVGPOST=0.9973;RSQ=0.5852;ERATE=0.0007;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16438084 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0385;AVGPOST=0.9981;RSQ=0.9852;ERATE=0.0004;THETA=0.0016;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 16438217 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7452;ERATE=0.0003;THETA=0.0041;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16438223 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9375;ERATE=0.0003;THETA=0.0021;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16438345 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.946;LDAF=0.0203;AVGPOST=0.9973;RSQ=0.9592;ERATE=0.0003;THETA=0.0013;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 16438410 . C CAA 701 PASS INDEL;BAVGPOST=0.971;BRSQ=0.748;LDAF=0.0923;AVGPOST=0.9261;RSQ=0.6343;ERATE=0.0051;THETA=0.0004;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 16438630 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5928;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16438648 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.754;LDAF=0.0025;AVGPOST=0.9983;RSQ=0.7162;ERATE=0.0008;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16438761 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7702;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16438802 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.713;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6208;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16438834 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.846;LDAF=0.0016;AVGPOST=0.9981;RSQ=0.4900;ERATE=0.0007;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16438883 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.916;LDAF=0.0150;AVGPOST=0.9937;RSQ=0.8586;ERATE=0.0004;THETA=0.0016;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 16438885 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.829;LDAF=0.0095;AVGPOST=0.9953;RSQ=0.7902;ERATE=0.0003;THETA=0.0010;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 16438979 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16439025 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.668;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.5069;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16439072 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0056;AVGPOST=0.9962;RSQ=0.7218;ERATE=0.0005;THETA=0.0026;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16439166 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.928;LDAF=0.0470;AVGPOST=0.9890;RSQ=0.9068;ERATE=0.0006;THETA=0.0005;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 16439169 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0422;AVGPOST=0.9979;RSQ=0.9825;ERATE=0.0004;THETA=0.0006;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 16439178 . AG A 89 PASS INDEL;BAVGPOST=0.998;BRSQ=0.698;LDAF=0.0022;AVGPOST=0.9967;RSQ=0.3626;ERATE=0.0009;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16439315 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.600;LDAF=0.0022;AVGPOST=0.9966;RSQ=0.4660;ERATE=0.0006;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16439396 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0099;AVGPOST=0.9965;RSQ=0.8536;ERATE=0.0005;THETA=0.0029;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 16439436 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0125;AVGPOST=0.9980;RSQ=0.9461;ERATE=0.0004;THETA=0.0006;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 16439710 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.960;LDAF=0.0145;AVGPOST=0.9982;RSQ=0.9488;ERATE=0.0004;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 16439744 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8442;ERATE=0.0004;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16439837 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0100;AVGPOST=0.9984;RSQ=0.9350;ERATE=0.0003;THETA=0.0009;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 16439896 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9253;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16439911 . TCTC T 104 PASS INDEL;BAVGPOST=0.999;BRSQ=0.717;LDAF=0.0042;AVGPOST=0.9955;RSQ=0.5941;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16440101 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.725;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4843;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16440119 . T TA 1427 PASS INDEL;BAVGPOST=0.995;BRSQ=0.741;LDAF=0.0110;AVGPOST=0.9930;RSQ=0.7392;ERATE=0.0007;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 16440211 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0033;AVGPOST=0.9992;RSQ=0.9046;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16440251 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0003;AVGPOST=0.9994;RSQ=0.4163;ERATE=0.0003;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 16440254 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5296;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16440344 . G GA 9 PASS INDEL;BAVGPOST=0.998;BRSQ=0.614;LDAF=0.0050;AVGPOST=0.9918;RSQ=0.3711;ERATE=0.0013;THETA=0.0022;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16440392 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.7969;AVGPOST=0.9925;RSQ=0.9832;ERATE=0.0007;THETA=0.0005;AC=1744;AN=2184 GT:DS:GL:BD 0.79853481 1
1 16440445 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.747;LDAF=0.0057;AVGPOST=0.9962;RSQ=0.7163;ERATE=0.0006;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16440449 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.724;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5598;ERATE=0.0006;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16440603 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.8700;ERATE=0.0005;THETA=0.0054;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16440605 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.808;LDAF=0.0022;AVGPOST=0.9976;RSQ=0.5961;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16440707 . A AG 214 PASS INDEL;BAVGPOST=0.997;BRSQ=0.613;LDAF=0.0043;AVGPOST=0.9947;RSQ=0.5209;ERATE=0.0006;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16440942 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.670;LDAF=0.0157;AVGPOST=0.9880;RSQ=0.6774;ERATE=0.0005;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 16440953 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.711;LDAF=0.0031;AVGPOST=0.9960;RSQ=0.5191;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16441000 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.961;LDAF=0.0415;AVGPOST=0.9962;RSQ=0.9661;ERATE=0.0008;THETA=0.0007;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 16441003 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0019;AVGPOST=0.9982;RSQ=0.5863;ERATE=0.0006;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16441032 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.982;LDAF=0.0385;AVGPOST=0.9980;RSQ=0.9829;ERATE=0.0004;THETA=0.0006;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 16441144 . G GT 44 PASS INDEL;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6282;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16441162 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0117;AVGPOST=0.9991;RSQ=0.9715;ERATE=0.0004;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 16441163 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.897;LDAF=0.0215;AVGPOST=0.9952;RSQ=0.9156;ERATE=0.0005;THETA=0.0005;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 16441240 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.913;LDAF=0.0091;AVGPOST=0.9985;RSQ=0.9307;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 16441363 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.984;LDAF=0.2825;AVGPOST=0.9834;RSQ=0.9694;ERATE=0.0008;THETA=0.0006;AC=613;AN=2184 GT:DS:GL:BD 0.28067765 0
1 16441437 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.719;LDAF=0.0033;AVGPOST=0.9960;RSQ=0.5162;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16441509 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0044;AVGPOST=0.9975;RSQ=0.7774;ERATE=0.0006;THETA=0.0022;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16441510 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.907;LDAF=0.0079;AVGPOST=0.9956;RSQ=0.7969;ERATE=0.0009;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 16441689 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0382;AVGPOST=0.9993;RSQ=0.9921;ERATE=0.0004;THETA=0.0006;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 16441728 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.988;LDAF=0.0891;AVGPOST=0.9968;RSQ=0.9856;ERATE=0.0004;THETA=0.0088;AC=193;AN=2184 GT:DS:GL:BD 0.08836997 0
1 16441739 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0595;AVGPOST=0.9957;RSQ=0.9757;ERATE=0.0004;THETA=0.0086;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 16441873 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8458;ERATE=0.0006;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16441956 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.753;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4551;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16442074 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9865;ERATE=0.0003;THETA=0.0061;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16442208 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0169;AVGPOST=0.9984;RSQ=0.9621;ERATE=0.0003;THETA=0.0027;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 16442245 . G GC 5783 PASS INDEL;BAVGPOST=0.992;BRSQ=0.968;LDAF=0.1026;AVGPOST=0.9889;RSQ=0.9530;ERATE=0.0009;THETA=0.0060;AC=216;AN=2184 GT:DS:GL:BD 0.09890110 0
1 16442301 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=0.9989;RSQ=0.9295;ERATE=0.0003;THETA=0.0118;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16442469 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.928;LDAF=0.0327;AVGPOST=0.9848;RSQ=0.8249;ERATE=0.0010;THETA=0.0048;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 16442472 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.976;LDAF=0.1050;AVGPOST=0.9745;RSQ=0.8983;ERATE=0.0016;THETA=0.0030;AC=215;AN=2184 GT:DS:GL:BD 0.09844323 0
1 16442477 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.972;LDAF=0.1001;AVGPOST=0.9847;RSQ=0.9317;ERATE=0.0013;THETA=0.0015;AC=211;AN=2184 GT:DS:GL:BD 0.09661172 0
1 16442486 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.848;LDAF=0.0246;AVGPOST=0.9897;RSQ=0.8496;ERATE=0.0004;THETA=0.0005;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 16442530 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.547;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.3611;ERATE=0.0007;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16442753 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.949;LDAF=0.0141;AVGPOST=0.9941;RSQ=0.8410;ERATE=0.0007;THETA=0.0015;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 16442827 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.644;LDAF=0.0056;AVGPOST=0.9963;RSQ=0.7190;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16442847 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.917;BRSQ=0.877;LDAF=0.4842;AVGPOST=0.8917;RSQ=0.8606;ERATE=0.0327;THETA=0.0011;AC=1066;AN=2184 GT:DS:GL:BD 0.48809522 0
1 16442908 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.936;LDAF=0.7859;AVGPOST=0.9642;RSQ=0.9234;ERATE=0.0069;THETA=0.0048;AC=1727;AN=2184 GT:DS:GL:BD 0.79075092 1
1 16442972 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8247;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16442984 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.686;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.3990;ERATE=0.0005;THETA=0.0042;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16443122 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.799;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8317;ERATE=0.0006;THETA=0.0014;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16443126 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6616;ERATE=0.0004;THETA=0.0043;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16443164 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6216;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16443231 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.975;LDAF=0.9555;AVGPOST=0.9982;RSQ=0.9828;ERATE=0.0004;THETA=0.0018;AC=2088;AN=2184 GT:DS:GL:BD 0.95604396 1
1 16443303 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8294;ERATE=0.0004;THETA=0.0019;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16443364 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16443369 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0044;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16443483 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.972;LDAF=0.0197;AVGPOST=0.9972;RSQ=0.9453;ERATE=0.0006;THETA=0.0033;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 16443710 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5595;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16443739 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0203;AVGPOST=0.9955;RSQ=0.9224;ERATE=0.0006;THETA=0.0009;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 16443748 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.735;LDAF=0.0003;AVGPOST=0.9993;RSQ=0.2428;ERATE=0.0004;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 16443760 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.971;LDAF=0.0269;AVGPOST=0.9960;RSQ=0.9451;ERATE=0.0005;THETA=0.0035;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 16443790 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5869;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16443793 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7543;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16443824 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0208;AVGPOST=0.9988;RSQ=0.9766;ERATE=0.0005;THETA=0.0035;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 16443828 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8951;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16443897 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.791;LDAF=0.0165;AVGPOST=0.9929;RSQ=0.8321;ERATE=0.0005;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 16443990 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.985;LDAF=0.4347;AVGPOST=0.9823;RSQ=0.9772;ERATE=0.0004;THETA=0.0004;AC=948;AN=2184 GT:DS:GL:BD 0.43406594 0
1 16444023 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0039;AVGPOST=0.9971;RSQ=0.7082;ERATE=0.0005;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16444065 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0021;AVGPOST=0.9991;RSQ=0.8052;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16444159 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0084;AVGPOST=0.9995;RSQ=0.9762;ERATE=0.0003;THETA=0.0008;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 16444176 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0024;AVGPOST=0.9990;RSQ=0.8348;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16444282 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.988;LDAF=0.3138;AVGPOST=0.9927;RSQ=0.9870;ERATE=0.0005;THETA=0.0010;AC=684;AN=2184 GT:DS:GL:BD 0.31318682 0
1 16444324 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6952;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16444759 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0026;AVGPOST=0.9987;RSQ=0.8062;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16444894 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7503;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16444936 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.825;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.8231;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16445168 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.664;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.7023;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16445194 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8424;ERATE=0.0005;THETA=0.0013;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16445337 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0035;AVGPOST=0.9988;RSQ=0.8450;ERATE=0.0004;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16445743 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7568;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16445769 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16445789 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9363;ERATE=0.0003;THETA=0.0036;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16445808 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.607;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6941;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16445826 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0026;AVGPOST=0.9973;RSQ=0.6581;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16445837 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.699;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6905;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16445902 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0004;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16445930 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=0.9992;RSQ=0.9504;ERATE=0.0003;THETA=0.0012;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 16445996 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16446141 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.729;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7641;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16446235 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0185;AVGPOST=0.9995;RSQ=0.9896;ERATE=0.0004;THETA=0.0017;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 16446257 . AG A 1179 PASS INDEL;BAVGPOST=0.994;BRSQ=0.851;LDAF=0.0145;AVGPOST=0.9921;RSQ=0.7789;ERATE=0.0004;THETA=0.0010;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 16446349 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.989;LDAF=0.5354;AVGPOST=0.9935;RSQ=0.9909;ERATE=0.0007;THETA=0.0006;AC=1169;AN=2184 GT:DS:GL:BD 0.53525639 1
1 16446489 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0028;AVGPOST=0.9982;RSQ=0.7717;ERATE=0.0003;THETA=0.0099;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16446643 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4680;ERATE=0.0006;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16446647 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0027;AVGPOST=0.9967;RSQ=0.5364;ERATE=0.0005;THETA=0.0027;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16446673 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4525;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16446697 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.879;LDAF=0.0074;AVGPOST=0.9980;RSQ=0.9081;ERATE=0.0004;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16446764 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.986;LDAF=0.2071;AVGPOST=0.9900;RSQ=0.9821;ERATE=0.0005;THETA=0.0015;AC=450;AN=2184 GT:DS:GL:BD 0.20604396 0
1 16446843 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0124;AVGPOST=0.9987;RSQ=0.9533;ERATE=0.0005;THETA=0.0079;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 16446980 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.971;LDAF=0.1997;AVGPOST=0.9899;RSQ=0.9779;ERATE=0.0009;THETA=0.0071;AC=433;AN=2184 GT:DS:GL:BD 0.19826007 0
1 16447012 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9249;ERATE=0.0003;THETA=0.0126;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16447204 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.9818;AVGPOST=0.9906;RSQ=0.7929;ERATE=0.0011;THETA=0.0014;AC=2149;AN=2184 GT:DS:GL:BD 0.98397434 1
1 16447310 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4870;ERATE=0.0004;THETA=0.0166;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16447413 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0030;AVGPOST=0.9993;RSQ=0.8971;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16447509 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.899;LDAF=0.0038;AVGPOST=0.9994;RSQ=0.9211;ERATE=0.0003;THETA=0.0037;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16447882 . GTGTC G 195 PASS INDEL;BAVGPOST=0.999;BRSQ=0.751;LDAF=0.0026;AVGPOST=0.9984;RSQ=0.7469;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16448024 . TTA T 45124 PASS INDEL;BAVGPOST=0.972;BRSQ=0.497;LDAF=0.9629;AVGPOST=0.9532;RSQ=0.5045;ERATE=0.0054;THETA=0.0015;AC=2128;AN=2184 GT:DS:GL:BD 0.97435898 1
1 16448037 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.974;LDAF=0.5465;AVGPOST=0.9761;RSQ=0.9678;ERATE=0.0023;THETA=0.0008;AC=1194;AN=2184 GT:DS:GL:BD 0.54670328 1
1 16448118 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0084;AVGPOST=0.9986;RSQ=0.9351;ERATE=0.0005;THETA=0.0016;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 16448162 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.619;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6890;ERATE=0.0004;THETA=0.0022;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16448267 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.880;LDAF=0.0035;AVGPOST=0.9992;RSQ=0.9134;ERATE=0.0004;THETA=0.0014;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16448295 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.2931;AVGPOST=0.9952;RSQ=0.9919;ERATE=0.0005;THETA=0.0010;AC=642;AN=2184 GT:DS:GL:BD 0.29395604 0
1 16448302 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.8992;AVGPOST=0.9958;RSQ=0.9817;ERATE=0.0003;THETA=0.0005;AC=1966;AN=2184 GT:DS:GL:BD 0.90018314 1
1 16448340 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0330;AVGPOST=0.9997;RSQ=0.9958;ERATE=0.0003;THETA=0.0015;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 16448442 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3283;AVGPOST=0.9971;RSQ=0.9957;ERATE=0.0007;THETA=0.0028;AC=718;AN=2184 GT:DS:GL:BD 0.32875457 0
1 16448622 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3290;AVGPOST=0.9981;RSQ=0.9972;ERATE=0.0003;THETA=0.0003;AC=719;AN=2184 GT:DS:GL:BD 0.32921246 0
1 16448676 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16448868 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16448903 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0152;AVGPOST=0.9999;RSQ=0.9961;ERATE=0.0003;THETA=0.0007;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 16449117 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0028;AVGPOST=0.9981;RSQ=0.7040;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16449141 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0214;AVGPOST=0.9991;RSQ=0.9825;ERATE=0.0004;THETA=0.0003;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 16449142 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16449180 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.655;LDAF=0.0040;AVGPOST=0.9966;RSQ=0.6772;ERATE=0.0003;THETA=0.0014;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16449185 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0211;AVGPOST=0.9997;RSQ=0.9943;ERATE=0.0003;THETA=0.0005;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 16449194 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.803;LDAF=0.0032;AVGPOST=0.9981;RSQ=0.7455;ERATE=0.0006;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16449317 . GC G 218 PASS INDEL;BAVGPOST=1.000;BRSQ=0.725;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16449362 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.702;LDAF=0.0022;AVGPOST=0.9988;RSQ=0.7489;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16449370 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.976;LDAF=0.0165;AVGPOST=0.9983;RSQ=0.9605;ERATE=0.0004;THETA=0.0002;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 16449384 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0065;AVGPOST=0.9998;RSQ=0.9865;ERATE=0.0004;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 16449440 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16449536 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0310;AVGPOST=0.9997;RSQ=0.9952;ERATE=0.0003;THETA=0.0013;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 16449632 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.775;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.5789;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16449680 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.9322;AVGPOST=0.9989;RSQ=0.9922;ERATE=0.0003;THETA=0.0003;AC=2036;AN=2184 GT:DS:GL:BD 0.93223441 1
1 16449726 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6450;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16449746 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2348;AVGPOST=0.9984;RSQ=0.9963;ERATE=0.0003;THETA=0.0003;AC=514;AN=2184 GT:DS:GL:BD 0.23534799 0
1 16449800 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16449845 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.885;LDAF=0.0105;AVGPOST=0.9969;RSQ=0.8895;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 16449884 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.932;LDAF=0.0813;AVGPOST=0.9867;RSQ=0.9348;ERATE=0.0004;THETA=0.0007;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 16449906 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6529;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16450002 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0213;AVGPOST=0.9989;RSQ=0.9786;ERATE=0.0005;THETA=0.0006;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 16450169 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4487;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16450176 . G GA 57 PASS INDEL;BAVGPOST=0.978;BRSQ=0.524;LDAF=0.0404;AVGPOST=0.9486;RSQ=0.4780;ERATE=0.0122;THETA=0.0006;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 16450300 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9133;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16450546 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.575;LDAF=0.0028;AVGPOST=0.9961;RSQ=0.4076;ERATE=0.0007;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16450644 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.787;LDAF=0.0017;AVGPOST=0.9978;RSQ=0.4626;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16450865 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.729;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.6894;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16450895 . T TA 168 PASS INDEL;BAVGPOST=0.998;BRSQ=0.754;LDAF=0.0049;AVGPOST=0.9961;RSQ=0.6626;ERATE=0.0008;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16450903 . AT A 56 PASS INDEL;BAVGPOST=0.999;BRSQ=0.616;LDAF=0.0017;AVGPOST=0.9973;RSQ=0.3348;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16450968 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0225;AVGPOST=0.9995;RSQ=0.9914;ERATE=0.0004;THETA=0.0005;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 16450996 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0214;AVGPOST=0.9991;RSQ=0.9835;ERATE=0.0004;THETA=0.0004;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 16451042 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.633;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6250;ERATE=0.0005;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16451051 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0045;AVGPOST=0.9970;RSQ=0.7733;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16451097 . CCA C 22 PASS INDEL;BAVGPOST=0.996;BRSQ=0.692;LDAF=0.0137;AVGPOST=0.9815;RSQ=0.4420;ERATE=0.0042;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16451200 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0046;AVGPOST=0.9993;RSQ=0.9288;ERATE=0.0003;THETA=0.0011;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16451267 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0210;AVGPOST=0.9999;RSQ=0.9972;ERATE=0.0003;THETA=0.0010;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 16451355 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.780;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6514;ERATE=0.0005;THETA=0.0049;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16451413 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9341;AVGPOST=0.9975;RSQ=0.9852;ERATE=0.0003;THETA=0.0007;AC=2041;AN=2184 GT:DS:GL:BD 0.93452382 1
1 16451544 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0215;AVGPOST=0.9989;RSQ=0.9817;ERATE=0.0003;THETA=0.0005;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 16451718 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.804;LDAF=0.0115;AVGPOST=0.9927;RSQ=0.7682;ERATE=0.0086;THETA=0.0016;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 16451722 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0063;AVGPOST=0.9993;RSQ=0.9632;ERATE=0.0005;THETA=0.0013;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 16451737 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16451766 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16451767 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2301;AVGPOST=0.9991;RSQ=0.9983;ERATE=0.0004;THETA=0.0004;AC=504;AN=2184 GT:DS:GL:BD 0.23076923 0
1 16451876 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0354;AVGPOST=0.9977;RSQ=0.9735;ERATE=0.0005;THETA=0.0024;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 16452021 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.844;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8188;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16452056 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.9031;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16452057 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0096;AVGPOST=0.9981;RSQ=0.9378;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 16452139 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5628;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16452201 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3845;AVGPOST=0.9976;RSQ=0.9967;ERATE=0.0006;THETA=0.0003;AC=841;AN=2184 GT:DS:GL:BD 0.38507327 0
1 16452294 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.940;LDAF=0.0133;AVGPOST=0.9992;RSQ=0.9748;ERATE=0.0003;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 16452482 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8143;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16452542 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0216;AVGPOST=0.9987;RSQ=0.9819;ERATE=0.0003;THETA=0.0006;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 16452543 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0138;AVGPOST=0.9998;RSQ=0.9944;ERATE=0.0003;THETA=0.0017;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 16452610 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0213;AVGPOST=0.9994;RSQ=0.9884;ERATE=0.0003;THETA=0.0011;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 16452658 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0164;AVGPOST=0.9987;RSQ=0.9695;ERATE=0.0005;THETA=0.0013;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 16452755 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0229;AVGPOST=0.9997;RSQ=0.9950;ERATE=0.0003;THETA=0.0005;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 16452790 . TC T 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4341;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16452836 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.760;LDAF=0.0034;AVGPOST=0.9985;RSQ=0.8172;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16452849 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0035;AVGPOST=0.9986;RSQ=0.8712;ERATE=0.0003;THETA=0.0019;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16452969 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=0.9990;RSQ=0.9301;ERATE=0.0005;THETA=0.0011;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16452998 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.5531;AVGPOST=0.9939;RSQ=0.9922;ERATE=0.0005;THETA=0.0004;AC=1207;AN=2184 GT:DS:GL:BD 0.55265570 1
1 16453171 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2870;AVGPOST=0.9976;RSQ=0.9964;ERATE=0.0003;THETA=0.0031;AC=628;AN=2184 GT:DS:GL:BD 0.28754580 0
1 16453216 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.2876;AVGPOST=0.9957;RSQ=0.9927;ERATE=0.0006;THETA=0.0006;AC=629;AN=2184 GT:DS:GL:BD 0.28800365 0
1 16453235 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.895;LDAF=0.0047;AVGPOST=0.9989;RSQ=0.8929;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16453385 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.774;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6448;ERATE=0.0005;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16453601 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.751;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9036;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16453671 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0346;AVGPOST=0.9991;RSQ=0.9893;ERATE=0.0003;THETA=0.0003;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 16453723 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.6378;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16453738 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.4779;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16453962 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0196;AVGPOST=0.9980;RSQ=0.9593;ERATE=0.0006;THETA=0.0008;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 16454315 . GCA G 83 PASS INDEL;BAVGPOST=0.986;BRSQ=0.586;LDAF=0.0298;AVGPOST=0.9676;RSQ=0.5400;ERATE=0.0048;THETA=0.0008;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 16454415 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16454514 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.718;LDAF=0.0049;AVGPOST=0.9985;RSQ=0.8607;ERATE=0.0003;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16454769 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0004;THETA=0.0044;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16454819 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.710;LDAF=0.0046;AVGPOST=0.9960;RSQ=0.6952;ERATE=0.0005;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16454833 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0052;AVGPOST=0.9987;RSQ=0.8956;ERATE=0.0004;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16454834 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1461;AVGPOST=0.9967;RSQ=0.9900;ERATE=0.0008;THETA=0.0012;AC=318;AN=2184 GT:DS:GL:BD 0.14560440 0
1 16454840 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0061;AVGPOST=0.9985;RSQ=0.9114;ERATE=0.0004;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 16454906 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0211;AVGPOST=0.9998;RSQ=0.9962;ERATE=0.0003;THETA=0.0011;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 16454972 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0047;AVGPOST=0.9973;RSQ=0.7834;ERATE=0.0006;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16455052 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.990;LDAF=0.6917;AVGPOST=0.9936;RSQ=0.9910;ERATE=0.0007;THETA=0.0003;AC=1513;AN=2184 GT:DS:GL:BD 0.69276559 1
1 16455053 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5195;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16455142 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.956;LDAF=0.0219;AVGPOST=0.9988;RSQ=0.9805;ERATE=0.0004;THETA=0.0007;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 16455143 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.9390;AVGPOST=0.9945;RSQ=0.9599;ERATE=0.0005;THETA=0.0005;AC=2056;AN=2184 GT:DS:GL:BD 0.94139194 1
1 16455335 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0214;AVGPOST=0.9992;RSQ=0.9842;ERATE=0.0005;THETA=0.0007;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 16455374 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0046;AVGPOST=0.9990;RSQ=0.9089;ERATE=0.0003;THETA=0.0034;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16455517 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0213;AVGPOST=0.9994;RSQ=0.9888;ERATE=0.0003;THETA=0.0007;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 16455534 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6223;ERATE=0.0004;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16455681 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0088;AVGPOST=0.9978;RSQ=0.9107;ERATE=0.0003;THETA=0.0010;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 16455819 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0306;AVGPOST=0.9982;RSQ=0.9762;ERATE=0.0004;THETA=0.0023;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 16455857 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0054;AVGPOST=0.9997;RSQ=0.9766;ERATE=0.0003;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 16455859 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8702;ERATE=0.0005;THETA=0.0061;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16456083 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16456116 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16456155 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0060;AVGPOST=0.9998;RSQ=0.9854;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 16456176 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.1602;AVGPOST=0.9964;RSQ=0.9909;ERATE=0.0010;THETA=0.0021;AC=348;AN=2184 GT:DS:GL:BD 0.15934066 0
1 16456238 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16456345 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6794;ERATE=0.0003;THETA=0.0062;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16456346 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0050;AVGPOST=0.9991;RSQ=0.9195;ERATE=0.0008;THETA=0.0010;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16456429 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8913;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16456504 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8725;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16456566 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9359;ERATE=0.0003;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16456589 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16456645 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9905;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16456676 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9863;ERATE=0.0003;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16456728 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16456763 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0107;AVGPOST=0.9995;RSQ=0.9840;ERATE=0.0003;THETA=0.0012;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 16456811 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16456858 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16456876 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0215;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0033;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 16456926 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16456940 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9709;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16457031 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0183;AVGPOST=1.0000;RSQ=0.9990;ERATE=0.0003;THETA=0.0005;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 16457126 rs112874800 C CT 1680 PASS INDEL;BAVGPOST=0.903;BRSQ=0.542;LDAF=0.1758;AVGPOST=0.8206;RSQ=0.4708;ERATE=0.0461;THETA=0.0036;AC=225;AN=2184 GT:DS:GL:BD 0.10302198 0
1 16457200 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.774;LDAF=0.0223;AVGPOST=0.9900;RSQ=0.8193;ERATE=0.0006;THETA=0.0005;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 16457313 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0215;AVGPOST=0.9997;RSQ=0.9938;ERATE=0.0003;THETA=0.0006;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 16457380 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16457416 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.909;LDAF=0.0038;AVGPOST=0.9995;RSQ=0.9453;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16457616 . GAC G 177 PASS INDEL;BAVGPOST=0.989;BRSQ=0.626;LDAF=0.0258;AVGPOST=0.9738;RSQ=0.5575;ERATE=0.0130;THETA=0.0018;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 16457686 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.644;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6242;ERATE=0.0004;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16458076 . C CA 1099 PASS INDEL;BAVGPOST=0.914;BRSQ=0.552;LDAF=0.1525;AVGPOST=0.8505;RSQ=0.5076;ERATE=0.0414;THETA=0.0043;AC=214;AN=2184 GT:DS:GL:BD 0.09798535 0
1 16458083 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8659;ERATE=0.0007;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16458185 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16458187 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0384;AVGPOST=0.9999;RSQ=0.9989;ERATE=0.0003;THETA=0.0025;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 16458223 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.7890;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16458317 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16458339 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0050;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0010;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16458499 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6954;ERATE=0.0004;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16458511 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0015;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16458597 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16458643 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16458645 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0018;AVGPOST=1.0000;RSQ=0.9879;ERATE=0.0007;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16458671 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16458722 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16458814 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1102;AVGPOST=0.9998;RSQ=0.9992;ERATE=0.0003;THETA=0.0004;AC=241;AN=2184 GT:DS:GL:BD 0.11034799 0
1 16458848 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0215;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 16458888 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0023;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16458891 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16459079 . TAC T 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.707;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4569;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16459170 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.870;LDAF=0.0032;AVGPOST=0.9987;RSQ=0.8273;ERATE=0.0003;THETA=0.0012;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16459292 . AGAG A 594 PASS INDEL;BAVGPOST=0.989;BRSQ=0.657;LDAF=0.0226;AVGPOST=0.9884;RSQ=0.8026;ERATE=0.0013;THETA=0.0004;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 16459354 . TG T 2499 PASS INDEL;BAVGPOST=0.994;BRSQ=0.899;LDAF=0.0307;AVGPOST=0.9871;RSQ=0.8415;ERATE=0.0020;THETA=0.0007;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 16459360 . GA G 329 PASS INDEL;BAVGPOST=0.991;BRSQ=0.580;LDAF=0.0189;AVGPOST=0.9905;RSQ=0.7916;ERATE=0.0012;THETA=0.0009;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 16459421 . AGAG A 1641 PASS INDEL;BAVGPOST=0.996;BRSQ=0.921;LDAF=0.0245;AVGPOST=0.9944;RSQ=0.9157;ERATE=0.0005;THETA=0.0025;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 16459507 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.989;LDAF=0.2507;AVGPOST=0.9967;RSQ=0.9952;ERATE=0.0005;THETA=0.0025;AC=549;AN=2184 GT:DS:GL:BD 0.25137362 0
1 16459527 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0065;AVGPOST=0.9988;RSQ=0.9202;ERATE=0.0004;THETA=0.0008;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 16459619 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16459624 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16459637 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0352;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0025;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 16459694 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0338;AVGPOST=1.0000;RSQ=0.9994;ERATE=0.0003;THETA=0.0005;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 16459736 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16459744 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16459745 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1586;AVGPOST=0.9998;RSQ=0.9994;ERATE=0.0021;THETA=0.0006;AC=347;AN=2184 GT:DS:GL:BD 0.15888278 0
1 16459787 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0126;AVGPOST=0.9995;RSQ=0.9843;ERATE=0.0003;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 16459832 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0009;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16459836 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0201;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0009;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 16459935 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16459939 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0008;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 16459964 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0061;AVGPOST=0.9996;RSQ=0.9792;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 16459983 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16460218 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0046;AVGPOST=0.9991;RSQ=0.9280;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16460219 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.808;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8947;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16460243 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4604;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16460339 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1917;AVGPOST=0.9991;RSQ=0.9983;ERATE=0.0003;THETA=0.0007;AC=419;AN=2184 GT:DS:GL:BD 0.19184981 0
1 16460373 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6262;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16460541 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2466;AVGPOST=0.9972;RSQ=0.9960;ERATE=0.0004;THETA=0.0006;AC=540;AN=2184 GT:DS:GL:BD 0.24725275 0
1 16460576 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.854;LDAF=0.0045;AVGPOST=0.9986;RSQ=0.8914;ERATE=0.0003;THETA=0.0013;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16460612 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0061;AVGPOST=0.9987;RSQ=0.9178;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 16460616 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16460636 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.7659;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16460696 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.928;LDAF=0.0219;AVGPOST=0.9972;RSQ=0.9442;ERATE=0.0007;THETA=0.0023;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 16460712 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7063;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16460743 rs33957854 TAAC T 75832 PASS INDEL;BAVGPOST=0.996;BRSQ=0.939;LDAF=0.9860;AVGPOST=0.9955;RSQ=0.8584;ERATE=0.0005;THETA=0.0010;AC=2158;AN=2184 GT:DS:GL:BD 0.98809522 1
1 16460814 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0042;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16460840 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1846;AVGPOST=0.9999;RSQ=0.9998;ERATE=0.0003;THETA=0.0009;AC=404;AN=2184 GT:DS:GL:BD 0.18498169 0
1 16460980 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16461024 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9827;ERATE=0.0003;THETA=0.0031;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 16461121 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0348;AVGPOST=0.9997;RSQ=0.9963;ERATE=0.0003;THETA=0.0007;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 16461168 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16461212 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0036;AVGPOST=0.9994;RSQ=0.9394;ERATE=0.0003;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16461220 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0217;AVGPOST=0.9995;RSQ=0.9913;ERATE=0.0003;THETA=0.0008;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 16461258 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16461307 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16461336 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0105;AVGPOST=0.9987;RSQ=0.9507;ERATE=0.0005;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 16461424 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16461496 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0500;ERATE=0.0003;THETA=0.0007;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 16461581 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0074;AVGPOST=0.9992;RSQ=0.9568;ERATE=0.0005;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 16461601 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0183;AVGPOST=0.9999;RSQ=0.9968;ERATE=0.0003;THETA=0.0003;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 16461627 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0059;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 16461647 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9524;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16461654 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16461739 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9562;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16461743 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16461833 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1759;AVGPOST=0.9999;RSQ=0.9996;ERATE=0.0003;THETA=0.0010;AC=385;AN=2184 GT:DS:GL:BD 0.17628205 0
1 16462000 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0229;AVGPOST=0.9999;RSQ=0.9982;ERATE=0.0003;THETA=0.0021;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 16462069 . TG T 30 PASS INDEL;BAVGPOST=1.000;BRSQ=0.699;LDAF=0.0016;AVGPOST=0.9983;RSQ=0.4911;ERATE=0.0007;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16462171 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16462219 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0032;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0004;THETA=0.0014;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16462264 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0027;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16462285 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9865;ERATE=0.0003;THETA=0.0011;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16462288 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16462307 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16462415 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16462645 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.425;LDAF=0.0108;AVGPOST=0.9827;RSQ=0.3687;ERATE=0.0021;THETA=0.0041;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16462656 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.507;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.3784;ERATE=0.0008;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16462879 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.651;LDAF=0.0074;AVGPOST=0.9960;RSQ=0.7759;ERATE=0.0005;THETA=0.0010;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 16462943 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.378;LDAF=0.0045;AVGPOST=0.9931;RSQ=0.3084;ERATE=0.0008;THETA=0.0022;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16462998 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.528;LDAF=0.0042;AVGPOST=0.9934;RSQ=0.2947;ERATE=0.0009;THETA=0.0074;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16463121 . AAAG A 1423 PASS INDEL;BAVGPOST=0.998;BRSQ=0.950;LDAF=0.0266;AVGPOST=0.9943;RSQ=0.9147;ERATE=0.0012;THETA=0.0029;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 16463156 . GAA G 1572 PASS INDEL;BAVGPOST=0.964;BRSQ=0.824;LDAF=0.0907;AVGPOST=0.9645;RSQ=0.8666;ERATE=0.0005;THETA=0.0015;AC=201;AN=2184 GT:DS:GL:BD 0.09203297 0
1 16463158 . A AG 2682 PASS INDEL;BAVGPOST=0.964;BRSQ=0.825;LDAF=0.0911;AVGPOST=0.9645;RSQ=0.8666;ERATE=0.0018;THETA=0.0009;AC=198;AN=2184 GT:DS:GL:BD 0.09065934 0
1 16463164 . GAA G 1616 PASS INDEL;BAVGPOST=0.962;BRSQ=0.784;LDAF=0.0774;AVGPOST=0.9680;RSQ=0.8617;ERATE=0.0006;THETA=0.0032;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 16463175 . GA G 1142 PASS INDEL;BAVGPOST=0.955;BRSQ=0.747;LDAF=0.0880;AVGPOST=0.9447;RSQ=0.7666;ERATE=0.0090;THETA=0.0026;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 16463187 . GGAA G 416 PASS INDEL;BAVGPOST=0.976;BRSQ=0.418;LDAF=0.0403;AVGPOST=0.9468;RSQ=0.4531;ERATE=0.0072;THETA=0.0007;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 16463219 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.566;LDAF=0.0103;AVGPOST=0.9895;RSQ=0.6195;ERATE=0.0015;THETA=0.0033;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 16463248 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0017;AVGPOST=0.9977;RSQ=0.4753;ERATE=0.0004;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16463261 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.5232;ERATE=0.0004;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16463268 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0199;AVGPOST=0.9972;RSQ=0.9407;ERATE=0.0004;THETA=0.0013;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 16463577 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7245;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16463601 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.770;LDAF=0.0025;AVGPOST=0.9983;RSQ=0.6897;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16463643 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1443;AVGPOST=0.9979;RSQ=0.9937;ERATE=0.0004;THETA=0.0028;AC=316;AN=2184 GT:DS:GL:BD 0.14468865 0
1 16463832 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.824;LDAF=0.0433;AVGPOST=0.9771;RSQ=0.7802;ERATE=0.0018;THETA=0.0012;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 16463954 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.617;LDAF=0.0028;AVGPOST=0.9963;RSQ=0.5620;ERATE=0.0004;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16464048 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.966;LDAF=0.0693;AVGPOST=0.9912;RSQ=0.9570;ERATE=0.0008;THETA=0.0004;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 16464140 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0147;AVGPOST=0.9997;RSQ=0.9905;ERATE=0.0003;THETA=0.0034;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 16464149 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6798;ERATE=0.0003;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16464253 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16464260 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1316;AVGPOST=0.9959;RSQ=0.9891;ERATE=0.0007;THETA=0.0004;AC=289;AN=2184 GT:DS:GL:BD 0.13232601 0
1 16464332 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6622;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16464376 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16464377 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0034;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16464489 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0181;AVGPOST=0.9994;RSQ=0.9845;ERATE=0.0004;THETA=0.0111;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 16464588 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8625;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16464604 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0003;THETA=0.0044;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16464612 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8481;ERATE=0.0006;THETA=0.0019;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16464614 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0038;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16464673 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.967;LDAF=0.3180;AVGPOST=0.9817;RSQ=0.9695;ERATE=0.0122;THETA=0.0126;AC=690;AN=2184 GT:DS:GL:BD 0.31593406 0
1 16464727 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0038;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16464736 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16464742 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0039;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16464805 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7417;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16464824 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16464918 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16464919 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16464936 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0210;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0011;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 16465295 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9905;ERATE=0.0003;THETA=0.0011;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16465297 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0317;AVGPOST=0.9995;RSQ=0.9934;ERATE=0.0003;THETA=0.0034;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 16465326 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0004;THETA=0.0110;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16465370 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.898;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.7102;ERATE=0.0003;THETA=0.0074;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16465403 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.950;LDAF=0.1723;AVGPOST=0.9825;RSQ=0.9570;ERATE=0.0004;THETA=0.0004;AC=368;AN=2184 GT:DS:GL:BD 0.16849817 0
1 16465404 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.950;LDAF=0.1722;AVGPOST=0.9829;RSQ=0.9581;ERATE=0.0003;THETA=0.0007;AC=367;AN=2184 GT:DS:GL:BD 0.16804029 0
1 16465452 . C CT 60 PASS INDEL;BAVGPOST=1.000;BRSQ=0.763;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.4332;ERATE=0.0003;THETA=0.0057;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16465496 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.976;LDAF=0.0210;AVGPOST=0.9987;RSQ=0.9720;ERATE=0.0003;THETA=0.0014;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 16465725 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.3976;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16465801 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0046;AVGPOST=0.9990;RSQ=0.9243;ERATE=0.0004;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16466003 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1486;AVGPOST=0.9955;RSQ=0.9879;ERATE=0.0004;THETA=0.0010;AC=325;AN=2184 GT:DS:GL:BD 0.14880952 0
1 16466194 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0055;AVGPOST=0.9999;RSQ=0.9880;ERATE=0.0003;THETA=0.0014;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 16466247 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0082;AVGPOST=0.9991;RSQ=0.9506;ERATE=0.0003;THETA=0.0008;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 16466381 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8403;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16466428 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16466473 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16466534 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.941;LDAF=0.0136;AVGPOST=0.9978;RSQ=0.9397;ERATE=0.0004;THETA=0.0009;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 16466547 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7682;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16466580 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0035;AVGPOST=0.9985;RSQ=0.8193;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16466582 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7863;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16466704 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.780;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4038;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16466892 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0021;AVGPOST=0.9989;RSQ=0.7895;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16466936 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0056;AVGPOST=0.9996;RSQ=0.9651;ERATE=0.0005;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 16466947 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0032;AVGPOST=0.9986;RSQ=0.8219;ERATE=0.0004;THETA=0.0044;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16467177 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4428;ERATE=0.0004;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16467266 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0124;AVGPOST=0.9989;RSQ=0.9629;ERATE=0.0004;THETA=0.0007;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 16467348 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0503;AVGPOST=0.9976;RSQ=0.9802;ERATE=0.0005;THETA=0.0014;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 16467385 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.604;LDAF=0.0032;AVGPOST=0.9945;RSQ=0.2905;ERATE=0.0007;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16467391 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.976;LDAF=0.6712;AVGPOST=0.9865;RSQ=0.9753;ERATE=0.0012;THETA=0.0029;AC=1472;AN=2184 GT:DS:GL:BD 0.67399269 1
1 16467522 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.752;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5910;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16467645 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.6211;AVGPOST=0.9971;RSQ=0.9954;ERATE=0.0004;THETA=0.0010;AC=1355;AN=2184 GT:DS:GL:BD 0.62042123 1
1 16467924 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.6220;AVGPOST=0.9967;RSQ=0.9945;ERATE=0.0006;THETA=0.0010;AC=1358;AN=2184 GT:DS:GL:BD 0.62179488 1
1 16467973 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0509;AVGPOST=0.9997;RSQ=0.9972;ERATE=0.0003;THETA=0.0007;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 16468159 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.566;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7531;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16468175 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0200;AVGPOST=0.9992;RSQ=0.9845;ERATE=0.0003;THETA=0.0012;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 16468232 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0015;AVGPOST=0.9978;RSQ=0.3641;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16468248 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.719;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5212;ERATE=0.0005;THETA=0.0054;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16468313 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0004;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16468535 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.9094;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16468755 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0047;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16468867 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0522;AVGPOST=0.9998;RSQ=0.9980;ERATE=0.0003;THETA=0.0005;AC=114;AN=2184 GT:DS:GL:BD 0.05219780 0
1 16468888 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.7504;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16468958 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8424;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16469179 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.986;LDAF=0.0316;AVGPOST=0.9988;RSQ=0.9839;ERATE=0.0005;THETA=0.0010;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 16469284 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.913;LDAF=0.0705;AVGPOST=0.9692;RSQ=0.8325;ERATE=0.0061;THETA=0.0008;AC=131;AN=2184 GT:DS:GL:BD 0.05998169 0
1 16469364 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0148;AVGPOST=0.9960;RSQ=0.8991;ERATE=0.0007;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 16469542 . GGGCA G 13 PASS INDEL;BAVGPOST=0.997;BRSQ=0.543;LDAF=0.0087;AVGPOST=0.9861;RSQ=0.3498;ERATE=0.0025;THETA=0.0024;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16469629 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.707;LDAF=0.0023;AVGPOST=0.9970;RSQ=0.5429;ERATE=0.0004;THETA=0.0022;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16469684 . T TG 83 PASS INDEL;BAVGPOST=0.978;BRSQ=0.413;LDAF=0.0339;AVGPOST=0.9545;RSQ=0.4511;ERATE=0.0102;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 16469816 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16469909 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8198;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16469925 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0473;AVGPOST=0.9992;RSQ=0.9937;ERATE=0.0003;THETA=0.0016;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 16469937 . AC A 3084 PASS INDEL;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0217;AVGPOST=0.9987;RSQ=0.9772;ERATE=0.0004;THETA=0.0006;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 16470083 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.727;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6438;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16470096 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0027;AVGPOST=0.9973;RSQ=0.6330;ERATE=0.0008;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16470226 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8858;ERATE=0.0003;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16470276 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9734;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16470416 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.977;LDAF=0.0215;AVGPOST=0.9989;RSQ=0.9818;ERATE=0.0004;THETA=0.0007;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 16470686 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0210;AVGPOST=0.9991;RSQ=0.9792;ERATE=0.0003;THETA=0.0009;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 16470878 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.831;LDAF=0.0069;AVGPOST=0.9978;RSQ=0.8930;ERATE=0.0003;THETA=0.0057;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16471000 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.2457;AVGPOST=0.9958;RSQ=0.9914;ERATE=0.0004;THETA=0.0004;AC=535;AN=2184 GT:DS:GL:BD 0.24496336 0
1 16471143 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.5315;ERATE=0.0005;THETA=0.0028;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16471286 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0052;AVGPOST=0.9995;RSQ=0.9661;ERATE=0.0003;THETA=0.0010;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16471293 . CCCCCGTT C 13660 PASS INDEL;BAVGPOST=0.994;BRSQ=0.945;LDAF=0.0463;AVGPOST=0.9975;RSQ=0.9780;ERATE=0.0005;THETA=0.0007;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 16471433 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6674;ERATE=0.0003;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16471455 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2451;AVGPOST=0.9966;RSQ=0.9929;ERATE=0.0007;THETA=0.0005;AC=534;AN=2184 GT:DS:GL:BD 0.24450549 0
1 16471697 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0054;AVGPOST=0.9992;RSQ=0.9328;ERATE=0.0003;THETA=0.0011;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16471784 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.699;LDAF=0.0017;AVGPOST=0.9974;RSQ=0.3772;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16471828 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0057;AVGPOST=0.9977;RSQ=0.8389;ERATE=0.0004;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 16471836 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.775;LDAF=0.0040;AVGPOST=0.9950;RSQ=0.5584;ERATE=0.0005;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16471896 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.8046;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16472006 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0248;AVGPOST=0.9989;RSQ=0.9813;ERATE=0.0005;THETA=0.0006;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 16472030 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0046;AVGPOST=0.9991;RSQ=0.9288;ERATE=0.0004;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16472272 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5854;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16472510 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.978;LDAF=0.0452;AVGPOST=0.9989;RSQ=0.9914;ERATE=0.0004;THETA=0.0004;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 16472606 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0473;AVGPOST=0.9985;RSQ=0.9878;ERATE=0.0005;THETA=0.0005;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 16472620 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0473;AVGPOST=0.9960;RSQ=0.9722;ERATE=0.0003;THETA=0.0006;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 16472621 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.747;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4664;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16472679 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0083;AVGPOST=0.9990;RSQ=0.9545;ERATE=0.0005;THETA=0.0007;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 16472718 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.833;LDAF=0.0170;AVGPOST=0.9944;RSQ=0.8733;ERATE=0.0004;THETA=0.0053;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 16472729 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.975;LDAF=0.0471;AVGPOST=0.9967;RSQ=0.9790;ERATE=0.0004;THETA=0.0028;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 16472780 . A AGG 145 PASS INDEL;BAVGPOST=0.998;BRSQ=0.708;LDAF=0.0059;AVGPOST=0.9936;RSQ=0.5550;ERATE=0.0011;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16472824 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0103;AVGPOST=0.9986;RSQ=0.9495;ERATE=0.0004;THETA=0.0012;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 16472829 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.573;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4451;ERATE=0.0006;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16472834 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.976;LDAF=0.1051;AVGPOST=0.9888;RSQ=0.9548;ERATE=0.0004;THETA=0.0012;AC=228;AN=2184 GT:DS:GL:BD 0.10439561 0
1 16472903 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0031;AVGPOST=0.9959;RSQ=0.5569;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16472993 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2405;AVGPOST=0.9981;RSQ=0.9957;ERATE=0.0004;THETA=0.0006;AC=525;AN=2184 GT:DS:GL:BD 0.24038461 0
1 16473090 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0057;AVGPOST=0.9987;RSQ=0.9351;ERATE=0.0004;THETA=0.0016;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16473094 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.676;LDAF=0.0061;AVGPOST=0.9967;RSQ=0.7804;ERATE=0.0005;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16473453 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0013;AVGPOST=0.9994;RSQ=0.8071;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16473475 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5980;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16473514 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2722;AVGPOST=0.9985;RSQ=0.9975;ERATE=0.0003;THETA=0.0009;AC=595;AN=2184 GT:DS:GL:BD 0.27243590 0
1 16473591 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9995;RSQ=0.9713;ERATE=0.0003;THETA=0.0011;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16473770 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0304;AVGPOST=0.9989;RSQ=0.9884;ERATE=0.0003;THETA=0.0007;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 16473781 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.4608;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16473893 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.785;LDAF=0.0034;AVGPOST=0.9982;RSQ=0.7895;ERATE=0.0005;THETA=0.0013;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16473945 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0191;AVGPOST=0.9990;RSQ=0.9757;ERATE=0.0003;THETA=0.0006;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 16473979 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.9466;AVGPOST=0.9992;RSQ=0.9953;ERATE=0.0003;THETA=0.0011;AC=2067;AN=2184 GT:DS:GL:BD 0.94642860 1
1 16473989 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9734;ERATE=0.0003;THETA=0.0013;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16474041 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0257;AVGPOST=0.9979;RSQ=0.9731;ERATE=0.0004;THETA=0.0004;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 16474057 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0025;AVGPOST=0.9994;RSQ=0.8891;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16474069 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6329;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16474110 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5892;AVGPOST=0.9981;RSQ=0.9975;ERATE=0.0005;THETA=0.0008;AC=1285;AN=2184 GT:DS:GL:BD 0.58836997 1
1 16474126 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0254;AVGPOST=0.9986;RSQ=0.9820;ERATE=0.0003;THETA=0.0041;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 16474128 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0050;AVGPOST=0.9996;RSQ=0.9683;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16474267 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9988;RSQ=0.9511;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16474280 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16474360 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0255;AVGPOST=0.9996;RSQ=0.9948;ERATE=0.0003;THETA=0.0004;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 16474417 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0267;AVGPOST=0.9984;RSQ=0.9800;ERATE=0.0003;THETA=0.0003;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 16474559 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.862;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.6473;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16474701 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3384;AVGPOST=0.9993;RSQ=0.9988;ERATE=0.0003;THETA=0.0006;AC=740;AN=2184 GT:DS:GL:BD 0.33882785 0
1 16474837 . GA G 1575 PASS INDEL;BAVGPOST=0.878;BRSQ=0.705;LDAF=0.2112;AVGPOST=0.8837;RSQ=0.7535;ERATE=0.0094;THETA=0.0006;AC=444;AN=2184 GT:DS:GL:BD 0.20329671 0
1 16474839 rs35127370 AC A 30659 PASS INDEL;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3394;AVGPOST=0.9956;RSQ=0.9928;ERATE=0.0009;THETA=0.0004;AC=742;AN=2184 GT:DS:GL:BD 0.33974358 0
1 16474844 . CT C 747 PASS INDEL;BAVGPOST=0.870;BRSQ=0.660;LDAF=0.1862;AVGPOST=0.9045;RSQ=0.7797;ERATE=0.0020;THETA=0.0007;AC=404;AN=2184 GT:DS:GL:BD 0.18498169 0
1 16474873 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9181;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16475001 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9915;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 16475048 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.956;LDAF=0.0085;AVGPOST=0.9991;RSQ=0.9530;ERATE=0.0004;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 16475090 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16475123 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2295;AVGPOST=0.9998;RSQ=0.9996;ERATE=0.0003;THETA=0.0007;AC=502;AN=2184 GT:DS:GL:BD 0.22985348 0
1 16475126 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2295;AVGPOST=0.9998;RSQ=0.9995;ERATE=0.0003;THETA=0.0014;AC=502;AN=2184 GT:DS:GL:BD 0.22985348 0
1 16475180 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16475189 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16475194 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16475203 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16475204 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16475243 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16475324 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16475374 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16475452 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16475507 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16475608 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16475656 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0019;AVGPOST=0.9996;RSQ=0.9179;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16475680 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0060;AVGPOST=1.0000;RSQ=0.9963;ERATE=0.0003;THETA=0.0016;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 16475742 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16475813 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0255;AVGPOST=0.9997;RSQ=0.9957;ERATE=0.0003;THETA=0.0005;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 16475834 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.683;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6104;ERATE=0.0004;THETA=0.0026;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16475855 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6553;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16475880 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0073;AVGPOST=0.9990;RSQ=0.9395;ERATE=0.0004;THETA=0.0015;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16475955 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7826;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16476012 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7607;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16476029 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16476223 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5592;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16476243 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.841;LDAF=0.0109;AVGPOST=0.9935;RSQ=0.7914;ERATE=0.0003;THETA=0.0011;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 16476254 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.747;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5035;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16476317 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5277;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16476352 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16476361 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9667;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16476431 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0029;AVGPOST=0.9975;RSQ=0.6424;ERATE=0.0006;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16476433 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0053;AVGPOST=0.9994;RSQ=0.9451;ERATE=0.0003;THETA=0.0021;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16476439 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.6440;ERATE=0.0004;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16476442 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4968;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16476460 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.638;LDAF=0.0024;AVGPOST=0.9984;RSQ=0.7401;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16476497 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0198;AVGPOST=0.9996;RSQ=0.9914;ERATE=0.0003;THETA=0.0046;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 16476681 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0068;AVGPOST=0.9992;RSQ=0.9473;ERATE=0.0003;THETA=0.0008;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16476766 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0262;AVGPOST=0.9995;RSQ=0.9914;ERATE=0.0004;THETA=0.0005;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 16476824 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0265;AVGPOST=0.9991;RSQ=0.9858;ERATE=0.0004;THETA=0.0009;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 16477263 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9914;ERATE=0.0003;THETA=0.0011;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16477305 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0005;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16477349 . GC G 7 PASS INDEL;BAVGPOST=0.987;BRSQ=0.117;LDAF=0.0344;AVGPOST=0.9392;RSQ=0.2920;ERATE=0.0028;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 16477467 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9865;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16477479 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16477497 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16477626 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16477800 . C CAG 181 PASS INDEL;BAVGPOST=0.999;BRSQ=0.702;LDAF=0.0026;AVGPOST=0.9973;RSQ=0.5626;ERATE=0.0006;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16477933 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8710;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16478010 . GGTA G 6658 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0306;AVGPOST=0.9979;RSQ=0.9770;ERATE=0.0003;THETA=0.0004;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 16478076 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16478089 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0060;AVGPOST=0.9979;RSQ=0.8682;ERATE=0.0004;THETA=0.0010;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16478291 . A AT 85 PASS INDEL;BAVGPOST=1.000;BRSQ=0.742;LDAF=0.0031;AVGPOST=0.9947;RSQ=0.3748;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16478330 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0054;AVGPOST=0.9993;RSQ=0.9531;ERATE=0.0003;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16478332 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.735;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16478461 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.9395;AVGPOST=0.9973;RSQ=0.9820;ERATE=0.0004;THETA=0.0009;AC=2052;AN=2184 GT:DS:GL:BD 0.93956041 1
1 16478517 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.925;LDAF=0.0114;AVGPOST=0.9988;RSQ=0.9548;ERATE=0.0003;THETA=0.0010;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 16478567 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0265;AVGPOST=0.9987;RSQ=0.9821;ERATE=0.0003;THETA=0.0012;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 16478633 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0023;AVGPOST=0.9987;RSQ=0.7740;ERATE=0.0005;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16478654 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.994;LDAF=0.6167;AVGPOST=0.9929;RSQ=0.9894;ERATE=0.0006;THETA=0.0005;AC=1346;AN=2184 GT:DS:GL:BD 0.61630034 1
1 16478738 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0004;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16479007 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.183;LDAF=0.0055;AVGPOST=0.9913;RSQ=0.3674;ERATE=0.0011;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16479181 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.982;LDAF=0.9380;AVGPOST=0.9956;RSQ=0.9702;ERATE=0.0006;THETA=0.0007;AC=2049;AN=2184 GT:DS:GL:BD 0.93818682 1
1 16479265 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.687;LDAF=0.0031;AVGPOST=0.9979;RSQ=0.7036;ERATE=0.0006;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16479323 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.777;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.4030;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16479377 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.578;LDAF=0.0021;AVGPOST=0.9967;RSQ=0.3871;ERATE=0.0009;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16479400 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0071;AVGPOST=0.9966;RSQ=0.8085;ERATE=0.0007;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 16479505 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.978;LDAF=0.6651;AVGPOST=0.9837;RSQ=0.9721;ERATE=0.0018;THETA=0.0012;AC=1458;AN=2184 GT:DS:GL:BD 0.66758239 1
1 16479574 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.745;LDAF=0.0020;AVGPOST=0.9975;RSQ=0.5404;ERATE=0.0005;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16479710 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0027;AVGPOST=0.9995;RSQ=0.9105;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16479752 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0225;AVGPOST=0.9996;RSQ=0.9919;ERATE=0.0003;THETA=0.0004;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 16479763 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.739;LDAF=0.0026;AVGPOST=0.9976;RSQ=0.6517;ERATE=0.0005;THETA=0.0025;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16479930 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.883;LDAF=0.0143;AVGPOST=0.9966;RSQ=0.9022;ERATE=0.0005;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 16479993 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.776;LDAF=0.0026;AVGPOST=0.9987;RSQ=0.7732;ERATE=0.0005;THETA=0.0024;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16479994 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.723;LDAF=0.0037;AVGPOST=0.9976;RSQ=0.7294;ERATE=0.0005;THETA=0.0012;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16480216 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.747;LDAF=0.0009;AVGPOST=0.9984;RSQ=0.2773;ERATE=0.0004;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 16480217 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8879;ERATE=0.0003;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16480250 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.763;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5335;ERATE=0.0005;THETA=0.0053;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16480472 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0234;AVGPOST=0.9995;RSQ=0.9887;ERATE=0.0004;THETA=0.0025;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 16480788 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0085;AVGPOST=0.9995;RSQ=0.9742;ERATE=0.0004;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 16480869 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.880;LDAF=0.0124;AVGPOST=0.9967;RSQ=0.8998;ERATE=0.0004;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 16480884 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6470;ERATE=0.0004;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16480997 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0596;AVGPOST=0.9983;RSQ=0.9889;ERATE=0.0006;THETA=0.0032;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 16481251 . C CA 2457 PASS INDEL;BAVGPOST=0.631;BRSQ=0.222;LDAF=0.6750;AVGPOST=0.6793;RSQ=0.4071;ERATE=0.0236;THETA=0.0008;AC=1625;AN=2184 GT:DS:GL:BD 0.74404764 1
1 16481366 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.909;BRSQ=0.801;LDAF=0.2169;AVGPOST=0.9260;RSQ=0.8593;ERATE=0.0007;THETA=0.0034;AC=445;AN=2184 GT:DS:GL:BD 0.20375457 0
1 16481486 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0618;AVGPOST=0.9969;RSQ=0.9820;ERATE=0.0006;THETA=0.0009;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 16481515 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.436;LDAF=0.0030;AVGPOST=0.9956;RSQ=0.3924;ERATE=0.0008;THETA=0.0018;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16482170 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0090;AVGPOST=0.9956;RSQ=0.8043;ERATE=0.0007;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16482430 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.584;LDAF=0.0021;AVGPOST=0.9970;RSQ=0.3582;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16482729 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.519;LDAF=0.0037;AVGPOST=0.9942;RSQ=0.4049;ERATE=0.0007;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16482817 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6466;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16482976 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.995;LDAF=0.6695;AVGPOST=0.9966;RSQ=0.9942;ERATE=0.0003;THETA=0.0012;AC=1460;AN=2184 GT:DS:GL:BD 0.66849816 1
1 16482988 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16483035 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0612;AVGPOST=0.9989;RSQ=0.9947;ERATE=0.0004;THETA=0.0004;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 16483138 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7604;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16483141 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0604;AVGPOST=0.9996;RSQ=0.9974;ERATE=0.0003;THETA=0.0009;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 16483205 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0622;AVGPOST=0.9978;RSQ=0.9895;ERATE=0.0004;THETA=0.0006;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 16483282 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0051;AVGPOST=0.9988;RSQ=0.8981;ERATE=0.0004;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16483334 . ACCCCTG A 303 PASS INDEL;BAVGPOST=0.999;BRSQ=0.669;LDAF=0.0029;AVGPOST=0.9963;RSQ=0.4342;ERATE=0.0008;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16483347 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.614;LDAF=0.0026;AVGPOST=0.9985;RSQ=0.7425;ERATE=0.0006;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16483470 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0007;AVGPOST=0.9991;RSQ=0.4461;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16483658 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0021;AVGPOST=0.9973;RSQ=0.5808;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16483679 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0605;AVGPOST=0.9994;RSQ=0.9957;ERATE=0.0005;THETA=0.0008;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 16483763 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0082;AVGPOST=0.9986;RSQ=0.9367;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 16483799 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0603;AVGPOST=0.9997;RSQ=0.9979;ERATE=0.0003;THETA=0.0008;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 16483860 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16484040 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.702;LDAF=0.0043;AVGPOST=0.9986;RSQ=0.8705;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16484113 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.911;LDAF=0.0030;AVGPOST=0.9987;RSQ=0.8196;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16484120 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.623;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.6942;ERATE=0.0004;THETA=0.0026;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16484129 . C CA 87 PASS INDEL;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.6886;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16484138 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.644;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4432;ERATE=0.0007;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16484198 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5931;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16484440 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16484456 . ATG A 201 PASS INDEL;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6616;ERATE=0.0004;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16484982 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0691;AVGPOST=0.9986;RSQ=0.9938;ERATE=0.0004;THETA=0.0011;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 16485001 . AACAG A 5559 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0213;AVGPOST=0.9993;RSQ=0.9845;ERATE=0.0003;THETA=0.0005;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 16485090 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0172;AVGPOST=0.9938;RSQ=0.8493;ERATE=0.0006;THETA=0.0010;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 16485182 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.5457;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16485190 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0338;AVGPOST=0.9989;RSQ=0.9858;ERATE=0.0005;THETA=0.0003;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 16485210 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16485282 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6530;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16485315 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6176;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16485374 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0044;AVGPOST=0.9989;RSQ=0.9096;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16485427 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16485477 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0031;AVGPOST=0.9987;RSQ=0.8734;ERATE=0.0004;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16485501 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16485521 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.728;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9449;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16485704 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16485811 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.6528;AVGPOST=0.9967;RSQ=0.9947;ERATE=0.0006;THETA=0.0006;AC=1425;AN=2184 GT:DS:GL:BD 0.65247256 1
1 16486043 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.805;LDAF=0.0041;AVGPOST=0.9982;RSQ=0.8437;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16486115 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7941;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16486293 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.6560;AVGPOST=0.9953;RSQ=0.9911;ERATE=0.0008;THETA=0.0009;AC=1433;AN=2184 GT:DS:GL:BD 0.65613556 1
1 16486341 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.391;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.3805;ERATE=0.0006;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16486343 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0045;AVGPOST=0.9986;RSQ=0.8732;ERATE=0.0003;THETA=0.0029;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16486392 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.974;LDAF=0.9284;AVGPOST=0.9924;RSQ=0.9476;ERATE=0.0014;THETA=0.0008;AC=2033;AN=2184 GT:DS:GL:BD 0.93086082 1
1 16486403 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.842;LDAF=0.0058;AVGPOST=0.9986;RSQ=0.9068;ERATE=0.0005;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 16486580 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8039;ERATE=0.0005;THETA=0.0023;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16486583 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.783;LDAF=0.0048;AVGPOST=0.9969;RSQ=0.7717;ERATE=0.0004;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16486653 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0077;AVGPOST=0.9996;RSQ=0.9775;ERATE=0.0003;THETA=0.0016;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 16486793 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.8646;AVGPOST=0.9963;RSQ=0.9895;ERATE=0.0005;THETA=0.0005;AC=1887;AN=2184 GT:DS:GL:BD 0.86401099 1
1 16486935 . T TA 159 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0075;AVGPOST=0.9987;RSQ=0.9180;ERATE=0.0005;THETA=0.0011;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16486954 rs5772660 CAG C 7523 PASS INDEL;BAVGPOST=0.930;BRSQ=0.801;LDAF=0.1957;AVGPOST=0.9356;RSQ=0.8577;ERATE=0.0036;THETA=0.0007;AC=435;AN=2184 GT:DS:GL:BD 0.19917582 0
1 16487251 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0025;AVGPOST=0.9991;RSQ=0.8548;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16487259 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6616;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16487317 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8096;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16487335 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0452;AVGPOST=0.9985;RSQ=0.9874;ERATE=0.0005;THETA=0.0004;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 16487377 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.5851;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16487477 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.698;LDAF=0.0070;AVGPOST=0.9947;RSQ=0.7215;ERATE=0.0006;THETA=0.0016;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16487553 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0010;AVGPOST=0.9987;RSQ=0.4626;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16487664 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.375;LDAF=0.0027;AVGPOST=0.9967;RSQ=0.4909;ERATE=0.0008;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16487698 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0079;AVGPOST=0.9992;RSQ=0.9559;ERATE=0.0003;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 16487748 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4995;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16487754 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.8624;AVGPOST=0.9963;RSQ=0.9884;ERATE=0.0005;THETA=0.0007;AC=1884;AN=2184 GT:DS:GL:BD 0.86263734 1
1 16487926 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6714;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16487971 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9916;ERATE=0.0003;THETA=0.0009;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 16488043 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9019;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16488044 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16488078 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16488087 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.844;LDAF=0.0132;AVGPOST=0.9966;RSQ=0.8997;ERATE=0.0004;THETA=0.0008;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 16488170 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0242;AVGPOST=0.9999;RSQ=0.9976;ERATE=0.0003;THETA=0.0014;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 16488267 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2578;AVGPOST=0.9954;RSQ=0.9922;ERATE=0.0008;THETA=0.0022;AC=562;AN=2184 GT:DS:GL:BD 0.25732601 0
1 16488517 . GAAGAA G 1002 PASS INDEL;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0054;AVGPOST=0.9970;RSQ=0.7918;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16488546 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0070;AVGPOST=0.9998;RSQ=0.9845;ERATE=0.0003;THETA=0.0008;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16488669 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2120;AVGPOST=0.9973;RSQ=0.9943;ERATE=0.0004;THETA=0.0008;AC=463;AN=2184 GT:DS:GL:BD 0.21199633 0
1 16488760 . AAGAG A 931 PASS INDEL;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9063;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16488823 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.8710;AVGPOST=0.9981;RSQ=0.9934;ERATE=0.0005;THETA=0.0010;AC=1903;AN=2184 GT:DS:GL:BD 0.87133700 1
1 16489018 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.643;LDAF=0.0174;AVGPOST=0.9849;RSQ=0.6791;ERATE=0.0007;THETA=0.0009;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 16489062 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.830;LDAF=0.0109;AVGPOST=0.9952;RSQ=0.8166;ERATE=0.0008;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 16489106 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.994;LDAF=0.4090;AVGPOST=0.9913;RSQ=0.9871;ERATE=0.0009;THETA=0.0011;AC=894;AN=2184 GT:DS:GL:BD 0.40934065 0
1 16489167 rs60757763 GC G 3123 PASS INDEL;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0635;AVGPOST=0.9953;RSQ=0.9746;ERATE=0.0004;THETA=0.0015;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 16489253 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7618;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16489695 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6408;ERATE=0.0006;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16489751 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.771;LDAF=0.0005;AVGPOST=0.9992;RSQ=0.4045;ERATE=0.0003;THETA=0.0037;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 16489773 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.695;LDAF=0.0008;AVGPOST=0.9998;RSQ=0.8876;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16489995 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.936;LDAF=0.0204;AVGPOST=0.9955;RSQ=0.9043;ERATE=0.0006;THETA=0.0012;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 16490058 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.971;LDAF=0.1346;AVGPOST=0.9952;RSQ=0.9860;ERATE=0.0006;THETA=0.0003;AC=295;AN=2184 GT:DS:GL:BD 0.13507326 0
1 16490151 rs35872571 CA C 8708 PASS INDEL;BAVGPOST=0.987;BRSQ=0.958;LDAF=0.1713;AVGPOST=0.9625;RSQ=0.9105;ERATE=0.0052;THETA=0.0005;AC=353;AN=2184 GT:DS:GL:BD 0.16163003 0
1 16490160 . AAT A 2554 PASS INDEL;BAVGPOST=0.981;BRSQ=0.773;LDAF=0.0436;AVGPOST=0.9761;RSQ=0.7945;ERATE=0.0028;THETA=0.0004;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 16490161 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.846;LDAF=0.0125;AVGPOST=0.9958;RSQ=0.8683;ERATE=0.0006;THETA=0.0009;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 16490529 . C CAAAAT 1347 PASS INDEL;BAVGPOST=0.990;BRSQ=0.792;LDAF=0.0365;AVGPOST=0.9831;RSQ=0.8232;ERATE=0.0011;THETA=0.0047;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 16490552 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.911;BRSQ=0.724;LDAF=0.1532;AVGPOST=0.9404;RSQ=0.8329;ERATE=0.0032;THETA=0.0007;AC=333;AN=2184 GT:DS:GL:BD 0.15247253 0
1 16490571 . A AAT 4856 PASS INDEL;BAVGPOST=0.912;BRSQ=0.538;LDAF=0.1390;AVGPOST=0.8761;RSQ=0.6038;ERATE=0.0085;THETA=0.0009;AC=237;AN=2184 GT:DS:GL:BD 0.10851648 0
1 16490575 . AAATAAAATAT A 7186 PASS INDEL;BAVGPOST=0.869;BRSQ=0.592;LDAF=0.1826;AVGPOST=0.8792;RSQ=0.6971;ERATE=0.0097;THETA=0.0013;AC=363;AN=2184 GT:DS:GL:BD 0.16620879 0
1 16490581 . AAT A 4293 PASS INDEL;BAVGPOST=0.887;BRSQ=0.532;LDAF=0.1535;AVGPOST=0.8548;RSQ=0.5762;ERATE=0.0175;THETA=0.0036;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 16490590 . TAAA T 908 PASS INDEL;BAVGPOST=0.980;BRSQ=0.683;LDAF=0.0320;AVGPOST=0.9865;RSQ=0.8411;ERATE=0.0013;THETA=0.0032;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 16490593 . A AAT 1735 PASS INDEL;BAVGPOST=0.980;BRSQ=0.694;LDAF=0.0399;AVGPOST=0.9846;RSQ=0.8472;ERATE=0.0010;THETA=0.0013;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 16490674 . TC T 40 PASS INDEL;BAVGPOST=0.999;BRSQ=0.698;LDAF=0.0027;AVGPOST=0.9971;RSQ=0.5416;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16490687 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.4622;ERATE=0.0006;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16490699 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.1583;AVGPOST=0.9969;RSQ=0.9917;ERATE=0.0010;THETA=0.0004;AC=345;AN=2184 GT:DS:GL:BD 0.15796703 0
1 16490741 . T TC 24 PASS INDEL;BAVGPOST=0.999;BRSQ=0.671;LDAF=0.0024;AVGPOST=0.9963;RSQ=0.3734;ERATE=0.0010;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16490798 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.762;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4917;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16490913 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7477;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16491004 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16491159 . T TA 928 PASS INDEL;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0058;AVGPOST=0.9994;RSQ=0.9474;ERATE=0.0004;THETA=0.0015;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 16491223 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9504;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16491225 . ATTATC A 172 PASS INDEL;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7937;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16491326 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.735;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7839;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16491340 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0021;AVGPOST=0.9982;RSQ=0.6660;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16491365 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0030;AVGPOST=0.9975;RSQ=0.6855;ERATE=0.0005;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16491406 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1355;AVGPOST=0.9984;RSQ=0.9950;ERATE=0.0006;THETA=0.0010;AC=296;AN=2184 GT:DS:GL:BD 0.13553114 0
1 16491446 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8448;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16491590 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16491606 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0441;AVGPOST=0.9992;RSQ=0.9921;ERATE=0.0003;THETA=0.0007;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 16491622 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8722;ERATE=0.0004;THETA=0.0013;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16491655 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1344;AVGPOST=0.9984;RSQ=0.9946;ERATE=0.0004;THETA=0.0009;AC=294;AN=2184 GT:DS:GL:BD 0.13461539 0
1 16491698 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.6093;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16491848 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0016;AVGPOST=0.9983;RSQ=0.5678;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16492021 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.4157;AVGPOST=0.9906;RSQ=0.9870;ERATE=0.0010;THETA=0.0107;AC=909;AN=2184 GT:DS:GL:BD 0.41620880 0
1 16492053 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0075;AVGPOST=0.9975;RSQ=0.8606;ERATE=0.0003;THETA=0.0084;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 16492061 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.982;LDAF=0.0661;AVGPOST=0.9970;RSQ=0.9803;ERATE=0.0004;THETA=0.0116;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 16492103 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.886;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7894;ERATE=0.0004;THETA=0.0114;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16492139 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5701;ERATE=0.0003;THETA=0.0059;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16492552 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0221;AVGPOST=0.9992;RSQ=0.9869;ERATE=0.0003;THETA=0.0080;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 16492652 rs35836631 TCCAG T 384 PASS INDEL;BAVGPOST=0.978;BRSQ=0.683;LDAF=0.0459;AVGPOST=0.9539;RSQ=0.6024;ERATE=0.0087;THETA=0.0096;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 16492656 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.728;LDAF=0.0331;AVGPOST=0.9697;RSQ=0.6439;ERATE=0.0053;THETA=0.0084;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 16492660 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.857;LDAF=0.0545;AVGPOST=0.9801;RSQ=0.8560;ERATE=0.0021;THETA=0.0107;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 16492668 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.790;LDAF=0.0788;AVGPOST=0.9669;RSQ=0.8367;ERATE=0.0063;THETA=0.0084;AC=157;AN=2184 GT:DS:GL:BD 0.07188645 0
1 16492696 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.877;BRSQ=0.641;LDAF=0.2799;AVGPOST=0.8642;RSQ=0.6702;ERATE=0.0828;THETA=0.0263;AC=523;AN=2184 GT:DS:GL:BD 0.23946886 0
1 16492712 rs71587741 TCCAG T 980 PASS INDEL;BAVGPOST=0.932;BRSQ=0.655;LDAF=0.1149;AVGPOST=0.9050;RSQ=0.6177;ERATE=0.0123;THETA=0.0051;AC=186;AN=2184 GT:DS:GL:BD 0.08516484 0
1 16492716 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.948;BRSQ=0.755;LDAF=0.1436;AVGPOST=0.9274;RSQ=0.7437;ERATE=0.0188;THETA=0.0130;AC=268;AN=2184 GT:DS:GL:BD 0.12271062 0
1 16492724 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.959;BRSQ=0.797;LDAF=0.1011;AVGPOST=0.9670;RSQ=0.8691;ERATE=0.0044;THETA=0.0005;AC=205;AN=2184 GT:DS:GL:BD 0.09386447 0
1 16492732 rs71587741 TCCAG T 4822 PASS INDEL;BAVGPOST=0.943;BRSQ=0.787;LDAF=0.1398;AVGPOST=0.9387;RSQ=0.8269;ERATE=0.0068;THETA=0.0080;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 16492736 rs71587741 GCCAT G 7996 PASS INDEL;BAVGPOST=0.945;BRSQ=0.795;LDAF=0.1136;AVGPOST=0.9595;RSQ=0.8739;ERATE=0.0016;THETA=0.0062;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 16492743 rs71587741 ATCCT A 7362 PASS INDEL;BAVGPOST=0.947;BRSQ=0.821;LDAF=0.1284;AVGPOST=0.9626;RSQ=0.8940;ERATE=0.0010;THETA=0.0036;AC=269;AN=2184 GT:DS:GL:BD 0.12316850 0
1 16492752 . TC T 396 PASS INDEL;BAVGPOST=0.992;BRSQ=0.556;LDAF=0.0107;AVGPOST=0.9909;RSQ=0.6771;ERATE=0.0006;THETA=0.0060;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 16492862 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.969;LDAF=0.8913;AVGPOST=0.9895;RSQ=0.9583;ERATE=0.0017;THETA=0.0015;AC=1950;AN=2184 GT:DS:GL:BD 0.89285713 1
1 16493006 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0099;AVGPOST=0.9973;RSQ=0.9114;ERATE=0.0003;THETA=0.0038;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 16493009 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0004;THETA=0.0129;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16493110 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0032;AVGPOST=0.9988;RSQ=0.8377;ERATE=0.0004;THETA=0.0056;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16493133 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.978;LDAF=0.0250;AVGPOST=0.9965;RSQ=0.9455;ERATE=0.0005;THETA=0.0056;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 16493225 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.960;BRSQ=0.939;LDAF=0.5182;AVGPOST=0.9567;RSQ=0.9456;ERATE=0.0089;THETA=0.0060;AC=1130;AN=2184 GT:DS:GL:BD 0.51739925 1
1 16493265 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.624;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4340;ERATE=0.0006;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16493337 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.898;LDAF=0.0381;AVGPOST=0.9951;RSQ=0.9528;ERATE=0.0007;THETA=0.0161;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 16493414 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.677;LDAF=0.0051;AVGPOST=0.9960;RSQ=0.7302;ERATE=0.0004;THETA=0.0059;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16493516 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.962;BRSQ=0.850;LDAF=0.8634;AVGPOST=0.9511;RSQ=0.8471;ERATE=0.0072;THETA=0.0019;AC=1914;AN=2184 GT:DS:GL:BD 0.87637365 1
1 16493596 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.776;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6432;ERATE=0.0004;THETA=0.0054;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16493936 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5341;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16494015 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.9030;AVGPOST=0.9948;RSQ=0.9774;ERATE=0.0006;THETA=0.0013;AC=1975;AN=2184 GT:DS:GL:BD 0.90430403 1
1 16494253 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0253;AVGPOST=0.9890;RSQ=0.8370;ERATE=0.0012;THETA=0.0007;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 16494262 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.865;LDAF=0.0303;AVGPOST=0.9833;RSQ=0.7915;ERATE=0.0011;THETA=0.0007;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 16494348 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.895;BRSQ=0.594;LDAF=0.1478;AVGPOST=0.8952;RSQ=0.6867;ERATE=0.0063;THETA=0.0032;AC=261;AN=2184 GT:DS:GL:BD 0.11950549 0
1 16494404 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0114;AVGPOST=0.9924;RSQ=0.7301;ERATE=0.0008;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 16494440 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.409;LDAF=0.0352;AVGPOST=0.9512;RSQ=0.4484;ERATE=0.0023;THETA=0.0032;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 16494803 . TTG T 152 PASS INDEL;BAVGPOST=0.983;BRSQ=0.550;LDAF=0.0436;AVGPOST=0.9426;RSQ=0.4567;ERATE=0.0097;THETA=0.0031;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 16494941 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.651;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.5880;ERATE=0.0005;THETA=0.0033;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16494961 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.5734;ERATE=0.0004;THETA=0.0028;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16495001 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.8563;AVGPOST=0.9931;RSQ=0.9779;ERATE=0.0009;THETA=0.0007;AC=1871;AN=2184 GT:DS:GL:BD 0.85668498 1
1 16495094 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.8595;AVGPOST=0.9979;RSQ=0.9934;ERATE=0.0004;THETA=0.0018;AC=1876;AN=2184 GT:DS:GL:BD 0.85897434 1
1 16495108 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.8595;AVGPOST=0.9979;RSQ=0.9932;ERATE=0.0003;THETA=0.0010;AC=1876;AN=2184 GT:DS:GL:BD 0.85897434 1
1 16495236 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8434;AVGPOST=0.9950;RSQ=0.9848;ERATE=0.0007;THETA=0.0004;AC=1841;AN=2184 GT:DS:GL:BD 0.84294873 1
1 16495650 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9019;ERATE=0.0003;THETA=0.0022;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16495690 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.8406;AVGPOST=0.9979;RSQ=0.9943;ERATE=0.0005;THETA=0.0009;AC=1835;AN=2184 GT:DS:GL:BD 0.84020144 1
1 16495702 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.8383;AVGPOST=0.9964;RSQ=0.9902;ERATE=0.0005;THETA=0.0016;AC=1832;AN=2184 GT:DS:GL:BD 0.83882785 1
1 16495782 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0014;AVGPOST=0.9992;RSQ=0.7777;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16495796 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0359;AVGPOST=0.9995;RSQ=0.9947;ERATE=0.0003;THETA=0.0015;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 16495846 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8434;AVGPOST=0.9985;RSQ=0.9955;ERATE=0.0004;THETA=0.0009;AC=1841;AN=2184 GT:DS:GL:BD 0.84294873 1
1 16495861 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.741;LDAF=0.0025;AVGPOST=0.9978;RSQ=0.7062;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16495871 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8441;AVGPOST=0.9991;RSQ=0.9971;ERATE=0.0004;THETA=0.0005;AC=1843;AN=2184 GT:DS:GL:BD 0.84386444 1
1 16495914 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8443;AVGPOST=0.9994;RSQ=0.9982;ERATE=0.0003;THETA=0.0008;AC=1843;AN=2184 GT:DS:GL:BD 0.84386444 1
1 16495938 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.738;LDAF=0.0020;AVGPOST=0.9994;RSQ=0.8813;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16495953 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8447;AVGPOST=0.9978;RSQ=0.9939;ERATE=0.0006;THETA=0.0008;AC=1843;AN=2184 GT:DS:GL:BD 0.84386444 1
1 16495976 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5703;ERATE=0.0005;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16495998 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8441;AVGPOST=0.9991;RSQ=0.9969;ERATE=0.0004;THETA=0.0005;AC=1843;AN=2184 GT:DS:GL:BD 0.84386444 1
1 16496184 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0023;AVGPOST=0.9983;RSQ=0.7025;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16496299 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8407;AVGPOST=0.9941;RSQ=0.9832;ERATE=0.0008;THETA=0.0006;AC=1839;AN=2184 GT:DS:GL:BD 0.84203297 1
1 16496398 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.761;LDAF=0.0029;AVGPOST=0.9988;RSQ=0.8212;ERATE=0.0004;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16496405 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0043;AVGPOST=0.9979;RSQ=0.8183;ERATE=0.0003;THETA=0.0015;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16496445 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.730;LDAF=0.0022;AVGPOST=0.9981;RSQ=0.6525;ERATE=0.0006;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16496501 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.665;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.3931;ERATE=0.0006;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16496594 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.832;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7726;ERATE=0.0005;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16496604 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.897;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7809;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16497064 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.867;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7917;ERATE=0.0004;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16497162 . CT C 142 PASS INDEL;BAVGPOST=0.998;BRSQ=0.754;LDAF=0.0036;AVGPOST=0.9977;RSQ=0.6988;ERATE=0.0006;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16497241 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.709;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6434;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16497261 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7995;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16497272 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.991;LDAF=0.5029;AVGPOST=0.9912;RSQ=0.9879;ERATE=0.0004;THETA=0.0006;AC=1098;AN=2184 GT:DS:GL:BD 0.50274724 1
1 16497290 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.764;LDAF=0.0106;AVGPOST=0.9935;RSQ=0.7608;ERATE=0.0005;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 16497325 . T TC 56 PASS INDEL;BAVGPOST=0.998;BRSQ=0.447;LDAF=0.0029;AVGPOST=0.9955;RSQ=0.4133;ERATE=0.0007;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16497353 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0021;AVGPOST=0.9977;RSQ=0.5735;ERATE=0.0007;THETA=0.0046;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16497420 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0355;AVGPOST=0.9992;RSQ=0.9908;ERATE=0.0003;THETA=0.0005;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 16497475 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.974;LDAF=0.0109;AVGPOST=0.9976;RSQ=0.9231;ERATE=0.0003;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 16497482 . CA C 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.780;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4762;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16497558 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.740;LDAF=0.0020;AVGPOST=0.9974;RSQ=0.4700;ERATE=0.0005;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16497637 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7052;ERATE=0.0004;THETA=0.0035;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16497642 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0035;AVGPOST=0.9976;RSQ=0.7396;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16497800 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.9098;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16497848 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8579;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16497952 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.900;BRSQ=0.684;LDAF=0.7904;AVGPOST=0.8451;RSQ=0.6343;ERATE=0.0294;THETA=0.0007;AC=1825;AN=2184 GT:DS:GL:BD 0.83562273 1
1 16497966 . G GA 44 PASS INDEL;BAVGPOST=0.903;BRSQ=0.094;LDAF=0.0481;AVGPOST=0.9319;RSQ=0.4052;ERATE=0.0032;THETA=0.0014;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 16498029 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.706;LDAF=0.0104;AVGPOST=0.9944;RSQ=0.7776;ERATE=0.0004;THETA=0.0008;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 16498048 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.4973;AVGPOST=0.9937;RSQ=0.9921;ERATE=0.0006;THETA=0.0004;AC=1084;AN=2184 GT:DS:GL:BD 0.49633700 0
1 16498080 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5763;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16498086 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.712;LDAF=0.0027;AVGPOST=0.9976;RSQ=0.7140;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16498127 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0185;AVGPOST=0.9966;RSQ=0.9270;ERATE=0.0005;THETA=0.0007;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 16498296 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.5843;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16498494 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9295;ERATE=0.0004;THETA=0.0011;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16498592 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0047;AVGPOST=0.9986;RSQ=0.8822;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16498953 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0058;AVGPOST=0.9984;RSQ=0.8859;ERATE=0.0003;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16498966 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0022;AVGPOST=0.9990;RSQ=0.8190;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16499013 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.5966;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16499090 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.886;LDAF=0.0115;AVGPOST=0.9988;RSQ=0.9506;ERATE=0.0004;THETA=0.0021;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 16499091 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0054;AVGPOST=0.9992;RSQ=0.9358;ERATE=0.0004;THETA=0.0013;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16499162 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.773;LDAF=0.0022;AVGPOST=0.9970;RSQ=0.4721;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16499231 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.523;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16499246 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.543;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6809;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16499308 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.909;LDAF=0.8266;AVGPOST=0.9574;RSQ=0.8831;ERATE=0.0041;THETA=0.0008;AC=1830;AN=2184 GT:DS:GL:BD 0.83791208 1
1 16499322 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0041;AVGPOST=0.9970;RSQ=0.6989;ERATE=0.0006;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16499466 . A AG 2302 PASS INDEL;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0550;AVGPOST=0.9947;RSQ=0.9641;ERATE=0.0007;THETA=0.0006;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 16499510 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0063;AVGPOST=0.9988;RSQ=0.9276;ERATE=0.0004;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 16499538 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.975;LDAF=0.0217;AVGPOST=0.9971;RSQ=0.9471;ERATE=0.0005;THETA=0.0005;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 16499605 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.968;LDAF=0.4814;AVGPOST=0.9888;RSQ=0.9858;ERATE=0.0007;THETA=0.0008;AC=1053;AN=2184 GT:DS:GL:BD 0.48214287 0
1 16499625 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.956;LDAF=0.0266;AVGPOST=0.9980;RSQ=0.9674;ERATE=0.0004;THETA=0.0009;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 16499677 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0060;AVGPOST=0.9973;RSQ=0.8272;ERATE=0.0006;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16499866 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9399;ERATE=0.0004;THETA=0.0018;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16499879 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16499885 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8492;AVGPOST=0.9989;RSQ=0.9961;ERATE=0.0004;THETA=0.0005;AC=1854;AN=2184 GT:DS:GL:BD 0.84890109 1
1 16499913 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.2424;AVGPOST=0.9965;RSQ=0.9926;ERATE=0.0007;THETA=0.0003;AC=530;AN=2184 GT:DS:GL:BD 0.24267399 0
1 16500200 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.693;LDAF=0.0058;AVGPOST=0.9967;RSQ=0.7772;ERATE=0.0005;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16500266 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.633;LDAF=0.0036;AVGPOST=0.9966;RSQ=0.5933;ERATE=0.0007;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16500372 rs72506935 T TG 37187 PASS INDEL;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8487;AVGPOST=0.9965;RSQ=0.9891;ERATE=0.0005;THETA=0.0005;AC=1853;AN=2184 GT:DS:GL:BD 0.84844321 1
1 16500439 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.787;LDAF=0.0043;AVGPOST=0.9987;RSQ=0.8845;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16500523 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4963;AVGPOST=0.9975;RSQ=0.9967;ERATE=0.0005;THETA=0.0006;AC=1082;AN=2184 GT:DS:GL:BD 0.49542123 0
1 16500593 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.644;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6053;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16500602 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.777;LDAF=0.0030;AVGPOST=0.9975;RSQ=0.6532;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16500760 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9787;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16500780 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5104;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16500872 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5708;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16500940 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4122;ERATE=0.0005;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16500985 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.8434;AVGPOST=0.9913;RSQ=0.9749;ERATE=0.0011;THETA=0.0003;AC=1847;AN=2184 GT:DS:GL:BD 0.84569597 1
1 16501238 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0026;AVGPOST=0.9991;RSQ=0.8676;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16501335 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.675;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.5287;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16501350 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.8468;AVGPOST=0.9983;RSQ=0.9944;ERATE=0.0005;THETA=0.0008;AC=1850;AN=2184 GT:DS:GL:BD 0.84706962 1
1 16501396 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6082;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16501436 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.8450;AVGPOST=0.9970;RSQ=0.9910;ERATE=0.0005;THETA=0.0009;AC=1845;AN=2184 GT:DS:GL:BD 0.84478021 1
1 16501505 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8271;ERATE=0.0005;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16501517 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.553;LDAF=0.0035;AVGPOST=0.9958;RSQ=0.5271;ERATE=0.0005;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16501649 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.8428;AVGPOST=0.9958;RSQ=0.9867;ERATE=0.0009;THETA=0.0003;AC=1841;AN=2184 GT:DS:GL:BD 0.84294873 1
1 16501668 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0192;AVGPOST=0.9957;RSQ=0.9219;ERATE=0.0005;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 16501734 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.659;LDAF=0.0034;AVGPOST=0.9987;RSQ=0.8288;ERATE=0.0004;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16501753 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.8435;AVGPOST=0.9969;RSQ=0.9898;ERATE=0.0006;THETA=0.0015;AC=1843;AN=2184 GT:DS:GL:BD 0.84386444 1
1 16501758 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.675;LDAF=0.0013;AVGPOST=0.9979;RSQ=0.3286;ERATE=0.0005;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16501863 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0004;THETA=0.0079;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16501887 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.918;LDAF=0.0066;AVGPOST=0.9978;RSQ=0.8674;ERATE=0.0005;THETA=0.0023;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 16501973 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0021;AVGPOST=0.9983;RSQ=0.6140;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16502023 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.491;LDAF=0.0054;AVGPOST=0.9945;RSQ=0.5778;ERATE=0.0008;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16502057 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.605;LDAF=0.0045;AVGPOST=0.9939;RSQ=0.5269;ERATE=0.0005;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16502103 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0080;AVGPOST=0.9956;RSQ=0.7794;ERATE=0.0007;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 16502236 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0074;AVGPOST=0.9969;RSQ=0.8397;ERATE=0.0009;THETA=0.0010;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 16502256 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.962;LDAF=0.3012;AVGPOST=0.9768;RSQ=0.9596;ERATE=0.0007;THETA=0.0076;AC=664;AN=2184 GT:DS:GL:BD 0.30402932 0
1 16502258 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.4165;ERATE=0.0005;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16502513 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.795;LDAF=0.0043;AVGPOST=0.9974;RSQ=0.7633;ERATE=0.0006;THETA=0.0095;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16502623 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9995;AVGPOST=0.9991;RSQ=0.0842;ERATE=0.0004;THETA=0.0026;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 16502880 . C CT 456 PASS INDEL;BAVGPOST=0.996;BRSQ=0.735;LDAF=0.0075;AVGPOST=0.9963;RSQ=0.8069;ERATE=0.0003;THETA=0.0141;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16502893 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0020;AVGPOST=0.9980;RSQ=0.6565;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16502991 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.540;LDAF=0.0030;AVGPOST=0.9960;RSQ=0.4430;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16503282 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7739;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16503333 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7717;ERATE=0.0004;THETA=0.0100;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16503340 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6140;ERATE=0.0004;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16503629 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.987;LDAF=0.0490;AVGPOST=0.9972;RSQ=0.9825;ERATE=0.0005;THETA=0.0072;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 16503681 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7300;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16503776 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0472;AVGPOST=0.9990;RSQ=0.9930;ERATE=0.0004;THETA=0.0021;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 16503781 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0471;AVGPOST=0.9992;RSQ=0.9947;ERATE=0.0003;THETA=0.0018;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 16503902 . CCTTCA C 547 PASS INDEL;BAVGPOST=0.997;BRSQ=0.714;LDAF=0.0067;AVGPOST=0.9936;RSQ=0.5732;ERATE=0.0006;THETA=0.0087;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16503955 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.8019;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16504018 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4568;ERATE=0.0005;THETA=0.0062;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16504044 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9240;ERATE=0.0003;THETA=0.0012;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16504063 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.825;LDAF=0.0036;AVGPOST=0.9982;RSQ=0.8460;ERATE=0.0004;THETA=0.0018;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16504130 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16504177 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8503;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16504347 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.692;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5940;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16504381 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7324;AVGPOST=0.9981;RSQ=0.9963;ERATE=0.0004;THETA=0.0006;AC=1598;AN=2184 GT:DS:GL:BD 0.73168498 1
1 16504425 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6328;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16504549 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.6854;AVGPOST=0.9984;RSQ=0.9972;ERATE=0.0004;THETA=0.0008;AC=1495;AN=2184 GT:DS:GL:BD 0.68452382 1
1 16504568 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5506;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16504573 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7773;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16504778 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8741;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16504863 . A AT 90 PASS INDEL;BAVGPOST=0.995;BRSQ=0.750;LDAF=0.0100;AVGPOST=0.9929;RSQ=0.7272;ERATE=0.0016;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 16504906 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.915;LDAF=0.0101;AVGPOST=0.9979;RSQ=0.9121;ERATE=0.0005;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 16505099 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0013;AVGPOST=0.9981;RSQ=0.4572;ERATE=0.0003;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16505100 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9587;ERATE=0.0003;THETA=0.0011;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16505160 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7805;ERATE=0.0004;THETA=0.0022;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16505228 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.803;LDAF=0.0018;AVGPOST=0.9994;RSQ=0.8677;ERATE=0.0004;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16505304 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.979;LDAF=0.6566;AVGPOST=0.9875;RSQ=0.9813;ERATE=0.0035;THETA=0.0066;AC=1433;AN=2184 GT:DS:GL:BD 0.65613556 1
1 16505320 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.5091;AVGPOST=0.9952;RSQ=0.9937;ERATE=0.0005;THETA=0.0005;AC=1111;AN=2184 GT:DS:GL:BD 0.50869966 1
1 16505510 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5869;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16505632 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8839;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16505677 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.790;LDAF=0.0018;AVGPOST=0.9994;RSQ=0.8649;ERATE=0.0003;THETA=0.0017;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16505776 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0088;AVGPOST=0.9988;RSQ=0.9549;ERATE=0.0003;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 16505908 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7034;AVGPOST=0.9977;RSQ=0.9961;ERATE=0.0003;THETA=0.0005;AC=1536;AN=2184 GT:DS:GL:BD 0.70329672 1
1 16505974 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6983;ERATE=0.0003;THETA=0.0022;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16506004 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.749;LDAF=0.0020;AVGPOST=0.9968;RSQ=0.4105;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16506016 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16506069 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.760;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6112;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16506070 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5512;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16506091 rs57314181 T TA 2029 PASS INDEL;BAVGPOST=0.950;BRSQ=0.683;LDAF=0.0832;AVGPOST=0.9429;RSQ=0.7252;ERATE=0.0034;THETA=0.0006;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 16506092 . T TA 710 PASS INDEL;BAVGPOST=0.932;BRSQ=0.561;LDAF=0.0813;AVGPOST=0.9372;RSQ=0.6719;ERATE=0.0012;THETA=0.0004;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 16506094 rs36090090 T TA 9152 PASS INDEL;BAVGPOST=0.775;BRSQ=0.584;LDAF=0.3790;AVGPOST=0.7669;RSQ=0.5980;ERATE=0.0326;THETA=0.0046;AC=773;AN=2184 GT:DS:GL:BD 0.35393772 0
1 16506095 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.828;BRSQ=0.639;LDAF=0.5003;AVGPOST=0.8087;RSQ=0.6390;ERATE=0.0742;THETA=0.0004;AC=1109;AN=2184 GT:DS:GL:BD 0.50778389 1
1 16506165 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.669;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4869;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16506260 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.968;LDAF=0.7282;AVGPOST=0.9833;RSQ=0.9679;ERATE=0.0017;THETA=0.0006;AC=1595;AN=2184 GT:DS:GL:BD 0.73031133 1
1 16506294 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.948;LDAF=0.0124;AVGPOST=0.9955;RSQ=0.8677;ERATE=0.0004;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 16506307 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4335;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16506404 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0480;AVGPOST=0.9983;RSQ=0.9856;ERATE=0.0004;THETA=0.0005;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 16506468 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0056;AVGPOST=0.9984;RSQ=0.9085;ERATE=0.0004;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 16506572 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0034;AVGPOST=0.9977;RSQ=0.7295;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16506792 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.643;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.3904;ERATE=0.0006;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16506993 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0059;AVGPOST=0.9993;RSQ=0.9568;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 16507118 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.750;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8112;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16507131 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5876;ERATE=0.0004;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16507200 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7986;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16507237 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0479;AVGPOST=0.9991;RSQ=0.9928;ERATE=0.0003;THETA=0.0007;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 16507265 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.7040;AVGPOST=0.9979;RSQ=0.9961;ERATE=0.0004;THETA=0.0007;AC=1537;AN=2184 GT:DS:GL:BD 0.70375460 1
1 16507377 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.5920;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16507384 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6680;AVGPOST=0.9971;RSQ=0.9952;ERATE=0.0006;THETA=0.0005;AC=1459;AN=2184 GT:DS:GL:BD 0.66804028 1
1 16507534 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0480;AVGPOST=0.9990;RSQ=0.9922;ERATE=0.0004;THETA=0.0009;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 16507618 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7331;AVGPOST=0.9990;RSQ=0.9980;ERATE=0.0003;THETA=0.0004;AC=1600;AN=2184 GT:DS:GL:BD 0.73260075 1
1 16507828 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7297;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16507980 . GGT G 24 PASS INDEL;BAVGPOST=1.000;BRSQ=0.715;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4332;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16508022 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0104;AVGPOST=0.9976;RSQ=0.9135;ERATE=0.0005;THETA=0.0008;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 16508059 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.6195;AVGPOST=0.9976;RSQ=0.9961;ERATE=0.0007;THETA=0.0005;AC=1353;AN=2184 GT:DS:GL:BD 0.61950547 1
1 16508093 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0484;AVGPOST=0.9987;RSQ=0.9893;ERATE=0.0005;THETA=0.0007;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 16508095 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0026;AVGPOST=0.9957;RSQ=0.3520;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16508096 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.780;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4969;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16508223 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.733;LDAF=0.0068;AVGPOST=0.9973;RSQ=0.8459;ERATE=0.0006;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 16508237 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.671;LDAF=0.0055;AVGPOST=0.9947;RSQ=0.6745;ERATE=0.0005;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16508348 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4632;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16508375 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7322;AVGPOST=0.9981;RSQ=0.9965;ERATE=0.0004;THETA=0.0026;AC=1600;AN=2184 GT:DS:GL:BD 0.73260075 1
1 16508534 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.7298;AVGPOST=0.9962;RSQ=0.9932;ERATE=0.0008;THETA=0.0005;AC=1594;AN=2184 GT:DS:GL:BD 0.72985345 1
1 16508629 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.829;LDAF=0.0172;AVGPOST=0.9929;RSQ=0.8447;ERATE=0.0005;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 16508664 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8523;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16508760 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.776;LDAF=0.0054;AVGPOST=0.9984;RSQ=0.8766;ERATE=0.0004;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16508815 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.742;LDAF=0.0027;AVGPOST=0.9984;RSQ=0.7701;ERATE=0.0008;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16508877 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0161;AVGPOST=0.9991;RSQ=0.9775;ERATE=0.0003;THETA=0.0002;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 16509029 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.6195;AVGPOST=0.9988;RSQ=0.9980;ERATE=0.0005;THETA=0.0009;AC=1352;AN=2184 GT:DS:GL:BD 0.61904764 1
1 16509048 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0128;AVGPOST=0.9989;RSQ=0.9674;ERATE=0.0003;THETA=0.0008;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 16509146 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16509195 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9694;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16509210 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16509356 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0553;AVGPOST=0.9931;RSQ=0.9539;ERATE=0.0014;THETA=0.0011;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 16509671 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.6106;AVGPOST=0.9981;RSQ=0.9969;ERATE=0.0006;THETA=0.0004;AC=1332;AN=2184 GT:DS:GL:BD 0.60989010 1
1 16509695 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.982;LDAF=0.0781;AVGPOST=0.9938;RSQ=0.9708;ERATE=0.0005;THETA=0.0006;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 16509725 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16509760 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16509820 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16509852 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0036;AVGPOST=0.9991;RSQ=0.9056;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16509853 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.744;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5665;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16509880 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0193;AVGPOST=0.9998;RSQ=0.9949;ERATE=0.0003;THETA=0.0006;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 16510052 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0100;AVGPOST=0.9990;RSQ=0.9578;ERATE=0.0003;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 16510139 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.6100;AVGPOST=0.9973;RSQ=0.9954;ERATE=0.0008;THETA=0.0008;AC=1332;AN=2184 GT:DS:GL:BD 0.60989010 1
1 16510229 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0196;AVGPOST=0.9992;RSQ=0.9822;ERATE=0.0005;THETA=0.0005;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 16510325 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5198;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16510359 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.718;LDAF=0.0032;AVGPOST=0.9983;RSQ=0.7732;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16510500 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.799;LDAF=0.0150;AVGPOST=0.9956;RSQ=0.8887;ERATE=0.0005;THETA=0.0010;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 16510546 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0083;AVGPOST=0.9994;RSQ=0.9686;ERATE=0.0003;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 16510560 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0482;AVGPOST=0.9996;RSQ=0.9964;ERATE=0.0004;THETA=0.0004;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 16510576 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9335;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16510626 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0003;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16510726 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0190;AVGPOST=0.9994;RSQ=0.9903;ERATE=0.0003;THETA=0.0005;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 16510798 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.7330;AVGPOST=0.9979;RSQ=0.9960;ERATE=0.0005;THETA=0.0005;AC=1599;AN=2184 GT:DS:GL:BD 0.73214287 1
1 16510894 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.975;LDAF=0.4880;AVGPOST=0.9881;RSQ=0.9847;ERATE=0.0009;THETA=0.0010;AC=1066;AN=2184 GT:DS:GL:BD 0.48809522 0
1 16510982 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.5344;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16510998 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5538;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16511020 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8096;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16511032 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.756;LDAF=0.0074;AVGPOST=0.9960;RSQ=0.7789;ERATE=0.0006;THETA=0.0009;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 16511044 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6077;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16511101 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0047;AVGPOST=0.9985;RSQ=0.8817;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16511195 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0021;AVGPOST=0.9980;RSQ=0.5983;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16511198 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.957;LDAF=0.0420;AVGPOST=0.9950;RSQ=0.9549;ERATE=0.0003;THETA=0.0007;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 16511214 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9628;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16511292 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0160;AVGPOST=0.9997;RSQ=0.9916;ERATE=0.0003;THETA=0.0011;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 16511539 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6169;AVGPOST=0.9980;RSQ=0.9968;ERATE=0.0005;THETA=0.0007;AC=1347;AN=2184 GT:DS:GL:BD 0.61675823 1
1 16511560 . GC G 114 PASS INDEL;BAVGPOST=0.999;BRSQ=0.730;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7153;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16511616 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1116;AVGPOST=0.9995;RSQ=0.9983;ERATE=0.0004;THETA=0.0006;AC=244;AN=2184 GT:DS:GL:BD 0.11172161 0
1 16511634 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4862;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16511717 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0113;AVGPOST=0.9976;RSQ=0.9235;ERATE=0.0005;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 16511732 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.748;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7194;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16511784 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0161;AVGPOST=0.9981;RSQ=0.9555;ERATE=0.0004;THETA=0.0007;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 16511887 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.741;LDAF=0.0086;AVGPOST=0.9969;RSQ=0.8412;ERATE=0.0009;THETA=0.0010;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 16511896 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.936;LDAF=0.0185;AVGPOST=0.9978;RSQ=0.9557;ERATE=0.0004;THETA=0.0007;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 16512053 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.681;LDAF=0.0023;AVGPOST=0.9988;RSQ=0.7740;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16512134 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.753;LDAF=0.0149;AVGPOST=0.9871;RSQ=0.6765;ERATE=0.0007;THETA=0.0007;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 16512156 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.445;LDAF=0.0078;AVGPOST=0.9887;RSQ=0.4371;ERATE=0.0009;THETA=0.0011;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16512310 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.889;LDAF=0.0456;AVGPOST=0.9878;RSQ=0.8989;ERATE=0.0005;THETA=0.0007;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 16512317 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7436;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16512348 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.988;LDAF=0.6090;AVGPOST=0.9854;RSQ=0.9790;ERATE=0.0010;THETA=0.0005;AC=1340;AN=2184 GT:DS:GL:BD 0.61355311 1
1 16512391 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.899;LDAF=0.0336;AVGPOST=0.9874;RSQ=0.8711;ERATE=0.0006;THETA=0.0005;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 16512424 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0176;AVGPOST=0.9972;RSQ=0.9409;ERATE=0.0007;THETA=0.0006;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 16512520 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.683;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4664;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16512586 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.6174;AVGPOST=0.9965;RSQ=0.9945;ERATE=0.0006;THETA=0.0014;AC=1349;AN=2184 GT:DS:GL:BD 0.61767399 1
1 16512661 . TA T 152 PASS INDEL;BAVGPOST=0.989;BRSQ=0.488;LDAF=0.0132;AVGPOST=0.9878;RSQ=0.6370;ERATE=0.0012;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 16512671 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.743;LDAF=0.0458;AVGPOST=0.9627;RSQ=0.6790;ERATE=0.0074;THETA=0.0005;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 16512672 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0191;AVGPOST=0.9972;RSQ=0.9420;ERATE=0.0006;THETA=0.0013;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 16512813 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.453;LDAF=0.0480;AVGPOST=0.9398;RSQ=0.4786;ERATE=0.0110;THETA=0.0015;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 16512920 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.959;LDAF=0.7110;AVGPOST=0.9690;RSQ=0.9463;ERATE=0.0035;THETA=0.0008;AC=1574;AN=2184 GT:DS:GL:BD 0.72069597 1
1 16512956 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8879;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16512962 . CA C 24 PASS INDEL;BAVGPOST=0.993;BRSQ=0.614;LDAF=0.0105;AVGPOST=0.9906;RSQ=0.6885;ERATE=0.0007;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 16512970 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0479;AVGPOST=0.9969;RSQ=0.9763;ERATE=0.0005;THETA=0.0005;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 16512970 . A AT 244 PASS INDEL;BAVGPOST=0.977;BRSQ=0.540;LDAF=0.0296;AVGPOST=0.9832;RSQ=0.7756;ERATE=0.0007;THETA=0.0011;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 16513120 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.623;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6102;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16513151 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.761;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4873;ERATE=0.0005;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16513153 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.6109;AVGPOST=0.9931;RSQ=0.9891;ERATE=0.0005;THETA=0.0010;AC=1336;AN=2184 GT:DS:GL:BD 0.61172163 1
1 16513339 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5444;ERATE=0.0003;THETA=0.0057;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16513412 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7740;ERATE=0.0003;THETA=0.0156;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16513657 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.608;LDAF=0.0128;AVGPOST=0.9865;RSQ=0.6109;ERATE=0.0030;THETA=0.0138;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 16513746 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.959;LDAF=0.2431;AVGPOST=0.9761;RSQ=0.9616;ERATE=0.0041;THETA=0.0016;AC=532;AN=2184 GT:DS:GL:BD 0.24358974 0
1 16513926 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.970;LDAF=0.5179;AVGPOST=0.9807;RSQ=0.9758;ERATE=0.0011;THETA=0.0087;AC=1137;AN=2184 GT:DS:GL:BD 0.52060437 1
1 16513929 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.747;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8245;ERATE=0.0003;THETA=0.0052;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16514011 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.768;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6359;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16514127 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.799;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8455;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16514189 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.722;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0038;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16514190 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5532;ERATE=0.0004;THETA=0.0069;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16514342 . GA G 11670 PASS INDEL;BAVGPOST=0.932;BRSQ=0.897;LDAF=0.5092;AVGPOST=0.8792;RSQ=0.8332;ERATE=0.0186;THETA=0.0054;AC=1124;AN=2184 GT:DS:GL:BD 0.51465201 1
1 16514343 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.965;LDAF=0.4755;AVGPOST=0.9789;RSQ=0.9732;ERATE=0.0007;THETA=0.0142;AC=1035;AN=2184 GT:DS:GL:BD 0.47390109 0
1 16514369 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.926;LDAF=0.1706;AVGPOST=0.9702;RSQ=0.9274;ERATE=0.0055;THETA=0.0009;AC=357;AN=2184 GT:DS:GL:BD 0.16346154 0
1 16514380 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.651;LDAF=0.0023;AVGPOST=0.9976;RSQ=0.6052;ERATE=0.0007;THETA=0.0036;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16514486 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0255;AVGPOST=0.9983;RSQ=0.9784;ERATE=0.0003;THETA=0.0086;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 16514544 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16514591 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7420;ERATE=0.0003;THETA=0.0031;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16514738 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.5605;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16514789 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.577;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.5691;ERATE=0.0007;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16514834 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6888;ERATE=0.0003;THETA=0.0148;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16514898 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0504;AVGPOST=0.9976;RSQ=0.9803;ERATE=0.0004;THETA=0.0079;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 16514926 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16514937 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16514960 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.819;LDAF=0.0033;AVGPOST=0.9984;RSQ=0.8138;ERATE=0.0004;THETA=0.0012;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16515060 rs59731307 C CT 84312 PASS INDEL;BAVGPOST=0.982;BRSQ=0.963;LDAF=0.7654;AVGPOST=0.9705;RSQ=0.9415;ERATE=0.0078;THETA=0.0006;AC=1682;AN=2184 GT:DS:GL:BD 0.77014655 1
1 16515086 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16515184 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8395;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16515249 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.851;LDAF=0.0107;AVGPOST=0.9968;RSQ=0.8693;ERATE=0.0003;THETA=0.0009;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 16515308 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0349;AVGPOST=0.9991;RSQ=0.9907;ERATE=0.0003;THETA=0.0035;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 16515331 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5491;ERATE=0.0003;THETA=0.0040;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16515380 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9734;ERATE=0.0003;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16515412 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7648;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16515421 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.5203;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16515429 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0340;AVGPOST=0.9989;RSQ=0.9897;ERATE=0.0003;THETA=0.0025;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 16515574 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6910;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16515693 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.761;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16515734 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.7294;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16515793 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0041;AVGPOST=0.9997;RSQ=0.9711;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16515805 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5355;AVGPOST=0.9982;RSQ=0.9973;ERATE=0.0009;THETA=0.0007;AC=1168;AN=2184 GT:DS:GL:BD 0.53479856 1
1 16515855 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0072;AVGPOST=0.9996;RSQ=0.9792;ERATE=0.0003;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 16515879 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2586;AVGPOST=0.9989;RSQ=0.9983;ERATE=0.0003;THETA=0.0010;AC=565;AN=2184 GT:DS:GL:BD 0.25869963 0
1 16515903 rs35201497 TG T 47936 PASS INDEL;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.7912;AVGPOST=0.9920;RSQ=0.9819;ERATE=0.0017;THETA=0.0008;AC=1729;AN=2184 GT:DS:GL:BD 0.79166669 1
1 16515910 . AG A 47 PASS INDEL;BAVGPOST=0.982;BRSQ=0.570;LDAF=0.0222;AVGPOST=0.9772;RSQ=0.6087;ERATE=0.0023;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 16516021 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7222;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16516110 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5262;AVGPOST=0.9962;RSQ=0.9950;ERATE=0.0006;THETA=0.0010;AC=1150;AN=2184 GT:DS:GL:BD 0.52655679 1
1 16516133 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0015;AVGPOST=0.9983;RSQ=0.6176;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16516325 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0291;AVGPOST=0.9975;RSQ=0.9657;ERATE=0.0005;THETA=0.0007;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 16516379 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.742;LDAF=0.0035;AVGPOST=0.9982;RSQ=0.7779;ERATE=0.0005;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16516466 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8096;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16516500 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16516527 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.7904;AVGPOST=0.9964;RSQ=0.9921;ERATE=0.0006;THETA=0.0004;AC=1727;AN=2184 GT:DS:GL:BD 0.79075092 1
1 16516585 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5364;AVGPOST=0.9982;RSQ=0.9972;ERATE=0.0004;THETA=0.0010;AC=1170;AN=2184 GT:DS:GL:BD 0.53571427 1
1 16516644 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.823;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7618;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16516677 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9624;ERATE=0.0003;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16516715 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.961;BRSQ=0.718;LDAF=0.0728;AVGPOST=0.9468;RSQ=0.6885;ERATE=0.0247;THETA=0.0012;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 16516758 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0326;AVGPOST=0.9997;RSQ=0.9964;ERATE=0.0003;THETA=0.0002;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 16516859 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7946;AVGPOST=0.9993;RSQ=0.9982;ERATE=0.0004;THETA=0.0002;AC=1735;AN=2184 GT:DS:GL:BD 0.79441392 1
1 16517019 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7835;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16517074 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16517093 . T TG 89 PASS INDEL;BAVGPOST=0.997;BRSQ=0.796;LDAF=0.0090;AVGPOST=0.9938;RSQ=0.7128;ERATE=0.0010;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 16517097 . T TG 676 PASS INDEL;BAVGPOST=0.997;BRSQ=0.956;LDAF=0.0286;AVGPOST=0.9983;RSQ=0.9724;ERATE=0.0004;THETA=0.0005;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 16517110 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.965;LDAF=0.0249;AVGPOST=0.9991;RSQ=0.9847;ERATE=0.0004;THETA=0.0004;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 16517178 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7217;AVGPOST=0.9987;RSQ=0.9975;ERATE=0.0005;THETA=0.0035;AC=1576;AN=2184 GT:DS:GL:BD 0.72161174 1
1 16517241 . TTGA T 118 PASS INDEL;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5888;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16517465 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7153;AVGPOST=0.9986;RSQ=0.9974;ERATE=0.0005;THETA=0.0006;AC=1561;AN=2184 GT:DS:GL:BD 0.71474361 1
1 16517662 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1873;AVGPOST=0.9982;RSQ=0.9955;ERATE=0.0004;THETA=0.0005;AC=410;AN=2184 GT:DS:GL:BD 0.18772894 0
1 16517669 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.713;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7282;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16517675 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.711;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0003;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16517721 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7927;AVGPOST=0.9980;RSQ=0.9953;ERATE=0.0005;THETA=0.0005;AC=1732;AN=2184 GT:DS:GL:BD 0.79304028 1
1 16517738 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7207;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16517784 . G GA 158 PASS INDEL;BAVGPOST=0.995;BRSQ=0.595;LDAF=0.0114;AVGPOST=0.9889;RSQ=0.6445;ERATE=0.0011;THETA=0.0013;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 16517922 rs71003252 TGGAG T 21168 PASS INDEL;BAVGPOST=0.963;BRSQ=0.897;LDAF=0.7894;AVGPOST=0.9838;RSQ=0.9640;ERATE=0.0008;THETA=0.0004;AC=1719;AN=2184 GT:DS:GL:BD 0.78708792 1
1 16518027 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7934;AVGPOST=0.9961;RSQ=0.9904;ERATE=0.0009;THETA=0.0005;AC=1732;AN=2184 GT:DS:GL:BD 0.79304028 1
1 16518030 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0028;AVGPOST=0.9967;RSQ=0.5888;ERATE=0.0003;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16518170 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.962;LDAF=0.7905;AVGPOST=0.9931;RSQ=0.9836;ERATE=0.0008;THETA=0.0004;AC=1730;AN=2184 GT:DS:GL:BD 0.79212457 1
1 16518284 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.7887;AVGPOST=0.9929;RSQ=0.9847;ERATE=0.0008;THETA=0.0006;AC=1723;AN=2184 GT:DS:GL:BD 0.78891939 1
1 16518288 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0038;AVGPOST=0.9979;RSQ=0.7675;ERATE=0.0005;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16518381 . G GC 26437 PASS INDEL;BAVGPOST=0.993;BRSQ=0.982;LDAF=0.7829;AVGPOST=0.9802;RSQ=0.9571;ERATE=0.0019;THETA=0.0004;AC=1716;AN=2184 GT:DS:GL:BD 0.78571427 1
1 16518387 rs111326960 CCAGG C 19674 PASS INDEL;BAVGPOST=0.964;BRSQ=0.915;LDAF=0.7434;AVGPOST=0.9103;RSQ=0.8310;ERATE=0.0120;THETA=0.0006;AC=1672;AN=2184 GT:DS:GL:BD 0.76556778 1
1 16518402 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7925;AVGPOST=0.9978;RSQ=0.9943;ERATE=0.0007;THETA=0.0007;AC=1732;AN=2184 GT:DS:GL:BD 0.79304028 1
1 16518440 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.516;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4718;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16518455 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7932;AVGPOST=0.9988;RSQ=0.9969;ERATE=0.0004;THETA=0.0007;AC=1732;AN=2184 GT:DS:GL:BD 0.79304028 1
1 16518494 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.761;LDAF=0.0038;AVGPOST=0.9968;RSQ=0.7025;ERATE=0.0006;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16518509 rs35179115 G GC 25388 PASS INDEL;BAVGPOST=0.939;BRSQ=0.861;LDAF=0.7489;AVGPOST=0.9394;RSQ=0.8808;ERATE=0.0075;THETA=0.0006;AC=1670;AN=2184 GT:DS:GL:BD 0.76465201 1
1 16518512 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.900;BRSQ=0.787;LDAF=0.6890;AVGPOST=0.8754;RSQ=0.7729;ERATE=0.0327;THETA=0.0005;AC=1562;AN=2184 GT:DS:GL:BD 0.71520144 1
1 16518570 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0020;AVGPOST=0.9984;RSQ=0.7061;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16518583 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7888;AVGPOST=0.9988;RSQ=0.9970;ERATE=0.0005;THETA=0.0007;AC=1722;AN=2184 GT:DS:GL:BD 0.78846157 1
1 16518639 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0103;AVGPOST=0.9990;RSQ=0.9616;ERATE=0.0003;THETA=0.0007;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 16518716 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7895;AVGPOST=0.9985;RSQ=0.9967;ERATE=0.0004;THETA=0.0004;AC=1724;AN=2184 GT:DS:GL:BD 0.78937727 1
1 16518748 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.4622;AVGPOST=0.9951;RSQ=0.9936;ERATE=0.0005;THETA=0.0005;AC=1007;AN=2184 GT:DS:GL:BD 0.46108058 0
1 16518794 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.629;LDAF=0.0038;AVGPOST=0.9970;RSQ=0.7362;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16518824 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.960;LDAF=0.0500;AVGPOST=0.9944;RSQ=0.9558;ERATE=0.0004;THETA=0.0004;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 16518866 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7881;AVGPOST=0.9987;RSQ=0.9968;ERATE=0.0006;THETA=0.0006;AC=1721;AN=2184 GT:DS:GL:BD 0.78800368 1
1 16518933 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.832;LDAF=0.0050;AVGPOST=0.9963;RSQ=0.7291;ERATE=0.0005;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16519030 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.742;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5611;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16519032 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6978;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16519273 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.863;BRSQ=0.638;LDAF=0.2621;AVGPOST=0.7944;RSQ=0.6155;ERATE=0.0225;THETA=0.0009;AC=432;AN=2184 GT:DS:GL:BD 0.19780220 0
1 16519289 . C CTA 1827 PASS INDEL;BAVGPOST=0.792;BRSQ=0.266;LDAF=0.2358;AVGPOST=0.7376;RSQ=0.3941;ERATE=0.0353;THETA=0.0009;AC=316;AN=2184 GT:DS:GL:BD 0.14468865 0
1 16519311 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.896;LDAF=0.0112;AVGPOST=0.9964;RSQ=0.8863;ERATE=0.0006;THETA=0.0012;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 16519443 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7935;AVGPOST=0.9953;RSQ=0.9884;ERATE=0.0009;THETA=0.0002;AC=1735;AN=2184 GT:DS:GL:BD 0.79441392 1
1 16519476 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0509;AVGPOST=0.9983;RSQ=0.9859;ERATE=0.0005;THETA=0.0002;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 16519519 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7966;ERATE=0.0005;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16519571 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0221;AVGPOST=0.9967;RSQ=0.9465;ERATE=0.0004;THETA=0.0017;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 16519625 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.721;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5253;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16519649 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.517;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4557;ERATE=0.0005;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16519650 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.554;LDAF=0.0143;AVGPOST=0.9933;RSQ=0.7984;ERATE=0.0007;THETA=0.0021;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 16519766 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0040;AVGPOST=0.9985;RSQ=0.8583;ERATE=0.0004;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16519773 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0008;AVGPOST=0.9989;RSQ=0.4777;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16519855 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.599;LDAF=0.0055;AVGPOST=0.9934;RSQ=0.5871;ERATE=0.0004;THETA=0.0020;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16519880 rs67038513 AAAAAT A 528 PASS INDEL;BAVGPOST=0.979;BRSQ=0.604;LDAF=0.0279;AVGPOST=0.9728;RSQ=0.6079;ERATE=0.0012;THETA=0.0008;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 16519896 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.702;LDAF=0.0416;AVGPOST=0.9710;RSQ=0.7171;ERATE=0.0017;THETA=0.0014;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 16519910 rs71587740 TTAAAA T 58304 PASS INDEL;BAVGPOST=0.987;BRSQ=0.966;LDAF=0.7745;AVGPOST=0.9744;RSQ=0.9457;ERATE=0.0027;THETA=0.0048;AC=1697;AN=2184 GT:DS:GL:BD 0.77701467 1
1 16519962 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7185;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16520017 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7928;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16520074 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16520081 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9411;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16520104 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0098;AVGPOST=0.9995;RSQ=0.9787;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 16520210 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.781;LDAF=0.0022;AVGPOST=0.9980;RSQ=0.6160;ERATE=0.0005;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16520368 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0210;AVGPOST=0.9984;RSQ=0.9745;ERATE=0.0003;THETA=0.0007;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 16520373 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=0.9999;RSQ=0.0499;ERATE=0.0003;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 16520378 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0425;AVGPOST=0.9995;RSQ=0.9958;ERATE=0.0004;THETA=0.0010;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 16520586 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.694;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4041;ERATE=0.0006;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16520602 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16520605 . G GT 113 PASS INDEL;BAVGPOST=0.984;BRSQ=0.584;LDAF=0.0340;AVGPOST=0.9611;RSQ=0.5390;ERATE=0.0056;THETA=0.0006;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 16520607 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.939;BRSQ=0.864;LDAF=0.7236;AVGPOST=0.9148;RSQ=0.8425;ERATE=0.0284;THETA=0.0008;AC=1621;AN=2184 GT:DS:GL:BD 0.74221611 1
1 16520847 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.0769;AVGPOST=0.9989;RSQ=0.9946;ERATE=0.0003;THETA=0.0003;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 16520861 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.812;LDAF=0.0044;AVGPOST=0.9989;RSQ=0.8777;ERATE=0.0004;THETA=0.0072;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16520939 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.696;LDAF=0.0031;AVGPOST=0.9985;RSQ=0.7768;ERATE=0.0004;THETA=0.0032;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16521041 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.511;LDAF=0.0168;AVGPOST=0.9811;RSQ=0.6055;ERATE=0.0013;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 16521163 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8116;ERATE=0.0004;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16521236 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.948;LDAF=0.4862;AVGPOST=0.9775;RSQ=0.9718;ERATE=0.0011;THETA=0.0011;AC=1071;AN=2184 GT:DS:GL:BD 0.49038461 0
1 16521278 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.731;LDAF=0.0071;AVGPOST=0.9953;RSQ=0.7413;ERATE=0.0006;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 16521295 . GAGAAAGAAAAGA G 61233 PASS INDEL;BAVGPOST=0.976;BRSQ=0.939;LDAF=0.7645;AVGPOST=0.9569;RSQ=0.9189;ERATE=0.0049;THETA=0.0019;AC=1695;AN=2184 GT:DS:GL:BD 0.77609891 1
1 16521330 . G GGGAA 27166 PASS INDEL;BAVGPOST=0.870;BRSQ=0.742;LDAF=0.6808;AVGPOST=0.8451;RSQ=0.7463;ERATE=0.0128;THETA=0.0005;AC=1573;AN=2184 GT:DS:GL:BD 0.72023809 1
1 16521349 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.950;BRSQ=0.876;LDAF=0.7378;AVGPOST=0.9086;RSQ=0.8297;ERATE=0.0123;THETA=0.0091;AC=1660;AN=2184 GT:DS:GL:BD 0.76007324 1
1 16521355 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.568;LDAF=0.0024;AVGPOST=0.9978;RSQ=0.6145;ERATE=0.0005;THETA=0.0024;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16521427 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.928;LDAF=0.0826;AVGPOST=0.9825;RSQ=0.9174;ERATE=0.0005;THETA=0.0036;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 16521429 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.442;LDAF=0.0137;AVGPOST=0.9874;RSQ=0.6470;ERATE=0.0009;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 16521432 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.452;LDAF=0.0095;AVGPOST=0.9886;RSQ=0.5537;ERATE=0.0009;THETA=0.0009;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 16521438 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.905;LDAF=0.0590;AVGPOST=0.9823;RSQ=0.8828;ERATE=0.0008;THETA=0.0035;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 16521444 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.751;LDAF=0.0118;AVGPOST=0.9924;RSQ=0.7515;ERATE=0.0007;THETA=0.0037;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 16521495 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.582;LDAF=0.0022;AVGPOST=0.9964;RSQ=0.2603;ERATE=0.0010;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16521556 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.951;BRSQ=0.888;LDAF=0.7662;AVGPOST=0.9713;RSQ=0.9446;ERATE=0.0008;THETA=0.0026;AC=1684;AN=2184 GT:DS:GL:BD 0.77106225 1
1 16521575 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.956;BRSQ=0.899;LDAF=0.7614;AVGPOST=0.9573;RSQ=0.9190;ERATE=0.0013;THETA=0.0010;AC=1682;AN=2184 GT:DS:GL:BD 0.77014655 1
1 16521646 rs111987710 GAAGA G 15988 PASS INDEL;BAVGPOST=0.971;BRSQ=0.940;LDAF=0.2223;AVGPOST=0.9741;RSQ=0.9549;ERATE=0.0003;THETA=0.0005;AC=483;AN=2184 GT:DS:GL:BD 0.22115384 0
1 16521649 . GA G 10941 PASS INDEL;BAVGPOST=0.972;BRSQ=0.941;LDAF=0.2222;AVGPOST=0.9735;RSQ=0.9538;ERATE=0.0005;THETA=0.0010;AC=483;AN=2184 GT:DS:GL:BD 0.22115384 0
1 16521652 . AG A 815 PASS INDEL;BAVGPOST=0.958;BRSQ=0.898;LDAF=0.1970;AVGPOST=0.9559;RSQ=0.9103;ERATE=0.0011;THETA=0.0006;AC=431;AN=2184 GT:DS:GL:BD 0.19734432 0
1 16521654 . AAAGT A 6261 PASS INDEL;BAVGPOST=0.963;BRSQ=0.898;LDAF=0.1899;AVGPOST=0.9590;RSQ=0.9113;ERATE=0.0017;THETA=0.0011;AC=415;AN=2184 GT:DS:GL:BD 0.19001831 0
1 16521702 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0042;AVGPOST=0.9989;RSQ=0.9052;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16521721 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.905;LDAF=0.0122;AVGPOST=0.9973;RSQ=0.9050;ERATE=0.0004;THETA=0.0055;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 16521759 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0019;AVGPOST=0.9994;RSQ=0.8458;ERATE=0.0004;THETA=0.0014;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16521801 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7527;ERATE=0.0004;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16521930 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0053;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16521941 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7874;AVGPOST=0.9986;RSQ=0.9966;ERATE=0.0004;THETA=0.0014;AC=1718;AN=2184 GT:DS:GL:BD 0.78663003 1
1 16521998 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7868;AVGPOST=0.9991;RSQ=0.9980;ERATE=0.0003;THETA=0.0007;AC=1718;AN=2184 GT:DS:GL:BD 0.78663003 1
1 16522002 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7822;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16522019 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6996;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16522269 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7837;AVGPOST=0.9985;RSQ=0.9964;ERATE=0.0006;THETA=0.0022;AC=1711;AN=2184 GT:DS:GL:BD 0.78342491 1
1 16522349 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.890;LDAF=0.0257;AVGPOST=0.9958;RSQ=0.9384;ERATE=0.0007;THETA=0.0010;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 16522380 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.982;LDAF=0.0463;AVGPOST=0.9963;RSQ=0.9671;ERATE=0.0006;THETA=0.0009;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 16522426 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0016;AVGPOST=0.9976;RSQ=0.4552;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16522438 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8792;ERATE=0.0003;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16522456 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.950;LDAF=0.2110;AVGPOST=0.9904;RSQ=0.9798;ERATE=0.0005;THETA=0.0004;AC=464;AN=2184 GT:DS:GL:BD 0.21245421 0
1 16522469 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.939;LDAF=0.2075;AVGPOST=0.9897;RSQ=0.9777;ERATE=0.0007;THETA=0.0018;AC=459;AN=2184 GT:DS:GL:BD 0.21016483 0
1 16522585 . G GA 11322 PASS INDEL;BAVGPOST=0.950;BRSQ=0.868;LDAF=0.2277;AVGPOST=0.9105;RSQ=0.8067;ERATE=0.0237;THETA=0.0002;AC=467;AN=2184 GT:DS:GL:BD 0.21382783 0
1 16522598 rs71587739 AAAAAAAC A 19586 PASS INDEL;BAVGPOST=0.961;BRSQ=0.889;LDAF=0.2064;AVGPOST=0.9889;RSQ=0.9739;ERATE=0.0008;THETA=0.0037;AC=460;AN=2184 GT:DS:GL:BD 0.21062271 0
1 16522813 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.682;LDAF=0.0019;AVGPOST=0.9982;RSQ=0.6462;ERATE=0.0003;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16522818 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.539;LDAF=0.0028;AVGPOST=0.9966;RSQ=0.5223;ERATE=0.0007;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16522932 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0721;AVGPOST=0.9978;RSQ=0.9896;ERATE=0.0004;THETA=0.0044;AC=157;AN=2184 GT:DS:GL:BD 0.07188645 0
1 16522975 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2171;AVGPOST=0.9992;RSQ=0.9980;ERATE=0.0004;THETA=0.0004;AC=475;AN=2184 GT:DS:GL:BD 0.21749084 0
1 16523344 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.886;LDAF=0.0188;AVGPOST=0.9964;RSQ=0.9231;ERATE=0.0004;THETA=0.0015;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 16523401 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0023;AVGPOST=0.9995;RSQ=0.9156;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16523433 rs113449680 TTC T 1730 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0105;AVGPOST=0.9994;RSQ=0.9735;ERATE=0.0003;THETA=0.0010;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 16523467 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6746;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16523491 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0083;AVGPOST=0.9989;RSQ=0.9463;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 16523576 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8400;ERATE=0.0012;THETA=0.0050;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16523588 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7163;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16523593 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6542;ERATE=0.0003;THETA=0.0030;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16523672 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.4763;AVGPOST=0.9899;RSQ=0.9857;ERATE=0.0014;THETA=0.0005;AC=1040;AN=2184 GT:DS:GL:BD 0.47619048 0
1 16523709 rs34250654 GC G 15203 PASS INDEL;BAVGPOST=0.972;BRSQ=0.920;LDAF=0.2059;AVGPOST=0.9880;RSQ=0.9729;ERATE=0.0005;THETA=0.0005;AC=454;AN=2184 GT:DS:GL:BD 0.20787546 0
1 16523713 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.941;LDAF=0.2772;AVGPOST=0.9867;RSQ=0.9770;ERATE=0.0009;THETA=0.0003;AC=611;AN=2184 GT:DS:GL:BD 0.27976191 0
1 16523767 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8107;AVGPOST=0.9936;RSQ=0.9850;ERATE=0.0006;THETA=0.0006;AC=1771;AN=2184 GT:DS:GL:BD 0.81089741 1
1 16523799 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0036;AVGPOST=0.9968;RSQ=0.6666;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16523865 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.819;LDAF=0.0026;AVGPOST=0.9971;RSQ=0.4983;ERATE=0.0006;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16523881 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9430;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16523959 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6928;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16524169 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8269;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16524211 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0700;AVGPOST=0.9981;RSQ=0.9908;ERATE=0.0004;THETA=0.0047;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 16524292 . ATTGTT A 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0021;AVGPOST=0.9977;RSQ=0.6226;ERATE=0.0004;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16524528 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.7270;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16524590 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0039;AVGPOST=0.9994;RSQ=0.9281;ERATE=0.0003;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16524653 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2176;AVGPOST=0.9996;RSQ=0.9989;ERATE=0.0003;THETA=0.0004;AC=476;AN=2184 GT:DS:GL:BD 0.21794872 0
1 16524737 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0099;AVGPOST=0.9993;RSQ=0.9692;ERATE=0.0003;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 16524778 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0042;AVGPOST=0.9990;RSQ=0.8903;ERATE=0.0006;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16524811 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9474;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16524858 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9927;ERATE=0.0003;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 16524869 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2171;AVGPOST=0.9998;RSQ=0.9995;ERATE=0.0003;THETA=0.0011;AC=475;AN=2184 GT:DS:GL:BD 0.21749084 0
1 16524908 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0699;AVGPOST=0.9999;RSQ=0.9992;ERATE=0.0003;THETA=0.0003;AC=153;AN=2184 GT:DS:GL:BD 0.07005495 0
1 16524928 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16525044 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0500;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 16525056 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2139;AVGPOST=0.9999;RSQ=0.9998;ERATE=0.0003;THETA=0.0011;AC=468;AN=2184 GT:DS:GL:BD 0.21428572 0
1 16525095 . T TC 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0017;AVGPOST=0.9979;RSQ=0.4963;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16525333 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0504;AVGPOST=0.9997;RSQ=0.9975;ERATE=0.0003;THETA=0.0008;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 16525343 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0500;ERATE=0.0003;THETA=0.0008;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 16525371 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16525408 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16525410 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16525419 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.9085;ERATE=0.0003;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16525433 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0013;AVGPOST=1.0000;RSQ=0.9839;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16525499 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0073;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 16525549 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2146;AVGPOST=0.9996;RSQ=0.9993;ERATE=0.0003;THETA=0.0004;AC=469;AN=2184 GT:DS:GL:BD 0.21474358 0
1 16525619 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16525636 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16525657 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0082;AVGPOST=1.0000;RSQ=0.9973;ERATE=0.0003;THETA=0.0009;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 16525667 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0097;AVGPOST=0.9998;RSQ=0.9886;ERATE=0.0003;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 16525790 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0109;AVGPOST=0.9997;RSQ=0.9888;ERATE=0.0004;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 16525824 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16525859 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16525887 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2143;AVGPOST=1.0000;RSQ=0.9999;ERATE=0.0003;THETA=0.0003;AC=469;AN=2184 GT:DS:GL:BD 0.21474358 0
1 16525966 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2189;AVGPOST=0.9996;RSQ=0.9990;ERATE=0.0004;THETA=0.0008;AC=479;AN=2184 GT:DS:GL:BD 0.21932234 0
1 16526153 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0258;AVGPOST=0.9995;RSQ=0.9909;ERATE=0.0004;THETA=0.0009;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 16526190 . T TCC 9400 PASS INDEL;BAVGPOST=0.982;BRSQ=0.952;LDAF=0.2234;AVGPOST=0.9889;RSQ=0.9758;ERATE=0.0011;THETA=0.0005;AC=483;AN=2184 GT:DS:GL:BD 0.22115384 0
1 16526194 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.974;LDAF=0.5478;AVGPOST=0.9899;RSQ=0.9857;ERATE=0.0013;THETA=0.0007;AC=1189;AN=2184 GT:DS:GL:BD 0.54441392 1
1 16526244 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6710;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16526419 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16526456 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0312;AVGPOST=0.9996;RSQ=0.9949;ERATE=0.0003;THETA=0.0006;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 16526511 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.6211;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16526529 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7600;AVGPOST=0.9985;RSQ=0.9968;ERATE=0.0007;THETA=0.0009;AC=1661;AN=2184 GT:DS:GL:BD 0.76053113 1
1 16526557 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0485;AVGPOST=0.9982;RSQ=0.9847;ERATE=0.0004;THETA=0.0005;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 16526722 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9799;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16526775 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0345;AVGPOST=0.9996;RSQ=0.9954;ERATE=0.0003;THETA=0.0007;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 16526806 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16526821 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5844;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16527165 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.990;LDAF=0.4467;AVGPOST=0.9949;RSQ=0.9938;ERATE=0.0004;THETA=0.0007;AC=976;AN=2184 GT:DS:GL:BD 0.44688645 0
1 16527192 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9261;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16527321 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2574;AVGPOST=0.9972;RSQ=0.9943;ERATE=0.0006;THETA=0.0007;AC=562;AN=2184 GT:DS:GL:BD 0.25732601 0
1 16527323 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0024;AVGPOST=0.9983;RSQ=0.7431;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16527365 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4070;ERATE=0.0006;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16527516 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0024;AVGPOST=0.9978;RSQ=0.6580;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16527526 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9670;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16527586 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16527643 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16527724 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.929;LDAF=0.0047;AVGPOST=0.9989;RSQ=0.9168;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16527753 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0125;AVGPOST=0.9996;RSQ=0.9864;ERATE=0.0003;THETA=0.0008;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 16527762 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16527784 . TCG T 18 PASS INDEL;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5556;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16527785 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9799;ERATE=0.0003;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16527786 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16528135 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16528218 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5050;AVGPOST=0.9997;RSQ=0.9995;ERATE=0.0003;THETA=0.0006;AC=1102;AN=2184 GT:DS:GL:BD 0.50457877 1
1 16528232 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16528233 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2556;AVGPOST=0.9999;RSQ=0.9997;ERATE=0.0003;THETA=0.0004;AC=559;AN=2184 GT:DS:GL:BD 0.25595239 0
1 16528284 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16528315 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16528404 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16528472 rs57272462 TACCCTAGGGACC T 41568 PASS INDEL;BAVGPOST=0.952;BRSQ=0.900;LDAF=0.7305;AVGPOST=0.9421;RSQ=0.8991;ERATE=0.0032;THETA=0.0003;AC=1632;AN=2184 GT:DS:GL:BD 0.74725276 1
1 16528538 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8292;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16528600 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4689;AVGPOST=0.9973;RSQ=0.9969;ERATE=0.0005;THETA=0.0006;AC=1022;AN=2184 GT:DS:GL:BD 0.46794870 0
1 16528721 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2567;AVGPOST=0.9981;RSQ=0.9958;ERATE=0.0007;THETA=0.0003;AC=561;AN=2184 GT:DS:GL:BD 0.25686812 0
1 16528824 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.964;BRSQ=0.894;LDAF=0.1967;AVGPOST=0.9664;RSQ=0.9283;ERATE=0.0025;THETA=0.0003;AC=437;AN=2184 GT:DS:GL:BD 0.20009157 0
1 16528842 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.953;BRSQ=0.646;LDAF=0.0806;AVGPOST=0.9429;RSQ=0.7117;ERATE=0.0078;THETA=0.0003;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 16528843 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.947;LDAF=0.7967;AVGPOST=0.9761;RSQ=0.9510;ERATE=0.0064;THETA=0.0004;AC=1751;AN=2184 GT:DS:GL:BD 0.80173993 1
1 16528992 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7927;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16529016 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16529075 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16529080 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8190;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16529117 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2225;AVGPOST=0.9987;RSQ=0.9972;ERATE=0.0007;THETA=0.0004;AC=488;AN=2184 GT:DS:GL:BD 0.22344323 0
1 16529211 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0271;AVGPOST=0.9992;RSQ=0.9887;ERATE=0.0004;THETA=0.0046;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 16529292 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16529359 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2209;AVGPOST=0.9984;RSQ=0.9964;ERATE=0.0004;THETA=0.0005;AC=482;AN=2184 GT:DS:GL:BD 0.22069597 0
1 16529369 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2199;AVGPOST=0.9976;RSQ=0.9949;ERATE=0.0005;THETA=0.0027;AC=482;AN=2184 GT:DS:GL:BD 0.22069597 0
1 16529370 . TTTTTG T 6701 PASS INDEL;BAVGPOST=0.993;BRSQ=0.924;LDAF=0.0510;AVGPOST=0.9966;RSQ=0.9734;ERATE=0.0005;THETA=0.0011;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 16529441 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.928;LDAF=0.0136;AVGPOST=0.9931;RSQ=0.8038;ERATE=0.0005;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 16529510 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.880;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8840;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16529559 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5817;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16529683 rs35778256 AGGG A 37749 PASS INDEL;BAVGPOST=0.995;BRSQ=0.987;LDAF=0.2224;AVGPOST=0.9901;RSQ=0.9797;ERATE=0.0030;THETA=0.0004;AC=485;AN=2184 GT:DS:GL:BD 0.22206959 0
1 16529717 . ACT A 8796 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0509;AVGPOST=0.9974;RSQ=0.9771;ERATE=0.0005;THETA=0.0014;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 16529818 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2209;AVGPOST=0.9976;RSQ=0.9951;ERATE=0.0006;THETA=0.0005;AC=483;AN=2184 GT:DS:GL:BD 0.22115384 0
1 16529822 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9773;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16529824 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2210;AVGPOST=0.9981;RSQ=0.9957;ERATE=0.0004;THETA=0.0012;AC=483;AN=2184 GT:DS:GL:BD 0.22115384 0
1 16529855 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16529865 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.9946;AVGPOST=0.9992;RSQ=0.9495;ERATE=0.0003;THETA=0.0021;AC=2173;AN=2184 GT:DS:GL:BD 0.99496335 1
1 16529877 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16530024 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7457;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16530049 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.7574;AVGPOST=0.9993;RSQ=0.9985;ERATE=0.0004;THETA=0.0005;AC=1654;AN=2184 GT:DS:GL:BD 0.75732601 1
1 16530050 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16530177 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2204;AVGPOST=0.9996;RSQ=0.9990;ERATE=0.0003;THETA=0.0011;AC=482;AN=2184 GT:DS:GL:BD 0.22069597 0
1 16530208 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16530241 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16530326 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6589;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16530342 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0101;AVGPOST=0.9998;RSQ=0.9892;ERATE=0.0003;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 16530364 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.8090;AVGPOST=0.9992;RSQ=0.9977;ERATE=0.0005;THETA=0.0005;AC=1767;AN=2184 GT:DS:GL:BD 0.80906594 1
1 16530398 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16530563 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16530592 rs61473973 CT C 4534 PASS INDEL;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0310;AVGPOST=0.9993;RSQ=0.9910;ERATE=0.0003;THETA=0.0070;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 16530659 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0018;AVGPOST=0.9981;RSQ=0.6169;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16530716 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2207;AVGPOST=0.9993;RSQ=0.9984;ERATE=0.0003;THETA=0.0006;AC=483;AN=2184 GT:DS:GL:BD 0.22115384 0
1 16530746 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0123;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 16530779 rs34588654 CAG C 34184 PASS INDEL;BAVGPOST=0.995;BRSQ=0.986;LDAF=0.2208;AVGPOST=0.9898;RSQ=0.9771;ERATE=0.0021;THETA=0.0003;AC=481;AN=2184 GT:DS:GL:BD 0.22023809 0
1 16530845 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0003;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16530850 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2206;AVGPOST=0.9987;RSQ=0.9969;ERATE=0.0005;THETA=0.0006;AC=483;AN=2184 GT:DS:GL:BD 0.22115384 0
1 16531043 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7425;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16531247 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16531263 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0062;AVGPOST=0.9995;RSQ=0.9751;ERATE=0.0003;THETA=0.0058;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 16531536 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9775;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16531713 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0027;AVGPOST=0.9974;RSQ=0.6728;ERATE=0.0016;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16531803 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16531859 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16531975 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16532025 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16532276 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16532377 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16532434 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16532457 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8383;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16532498 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0489;AVGPOST=1.0000;RSQ=0.9996;ERATE=0.0003;THETA=0.0002;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 16532554 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.727;LDAF=0.0029;AVGPOST=0.9972;RSQ=0.6905;ERATE=0.0014;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16532803 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2216;AVGPOST=0.9998;RSQ=0.9995;ERATE=0.0003;THETA=0.0004;AC=485;AN=2184 GT:DS:GL:BD 0.22206959 0
1 16532848 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2218;AVGPOST=0.9996;RSQ=0.9989;ERATE=0.0003;THETA=0.0005;AC=485;AN=2184 GT:DS:GL:BD 0.22206959 0
1 16533022 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.7563;AVGPOST=0.9939;RSQ=0.9882;ERATE=0.0008;THETA=0.0004;AC=1656;AN=2184 GT:DS:GL:BD 0.75824177 1
1 16533072 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.906;LDAF=0.0314;AVGPOST=0.9953;RSQ=0.9447;ERATE=0.0005;THETA=0.0004;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 16533085 rs3831999 A AC 1360 PASS INDEL;BAVGPOST=0.886;BRSQ=0.679;LDAF=0.2365;AVGPOST=0.9187;RSQ=0.8221;ERATE=0.0048;THETA=0.0003;AC=485;AN=2184 GT:DS:GL:BD 0.22206959 0
1 16533096 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.948;BRSQ=0.853;LDAF=0.2172;AVGPOST=0.9851;RSQ=0.9655;ERATE=0.0012;THETA=0.0005;AC=478;AN=2184 GT:DS:GL:BD 0.21886447 0
1 16533105 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.952;BRSQ=0.867;LDAF=0.2172;AVGPOST=0.9851;RSQ=0.9664;ERATE=0.0012;THETA=0.0009;AC=478;AN=2184 GT:DS:GL:BD 0.21886447 0
1 16533258 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2279;AVGPOST=0.9967;RSQ=0.9925;ERATE=0.0007;THETA=0.0011;AC=496;AN=2184 GT:DS:GL:BD 0.22710623 0
1 16533743 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.684;LDAF=0.0219;AVGPOST=0.9856;RSQ=0.7185;ERATE=0.0010;THETA=0.0005;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 16533768 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6371;ERATE=0.0006;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16533770 . G GT 12 PASS INDEL;BAVGPOST=0.999;BRSQ=0.532;LDAF=0.0023;AVGPOST=0.9963;RSQ=0.2777;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16533794 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0039;AVGPOST=0.9989;RSQ=0.9085;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16533817 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2221;AVGPOST=0.9993;RSQ=0.9983;ERATE=0.0004;THETA=0.0020;AC=486;AN=2184 GT:DS:GL:BD 0.22252747 0
1 16533830 rs3832000 AATTC A 39964 PASS INDEL;BAVGPOST=0.993;BRSQ=0.987;LDAF=0.7497;AVGPOST=0.9872;RSQ=0.9735;ERATE=0.0014;THETA=0.0005;AC=1644;AN=2184 GT:DS:GL:BD 0.75274724 1
1 16533873 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16533928 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16533973 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 16533983 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16534002 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2194;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=480;AN=2184 GT:DS:GL:BD 0.21978022 0
1 16534005 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16534047 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16534074 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0052;AVGPOST=0.9997;RSQ=0.9748;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16534107 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16534185 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16534255 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2194;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=480;AN=2184 GT:DS:GL:BD 0.21978022 0
1 16534394 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8345;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16534403 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9723;ERATE=0.0004;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 16534471 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8305;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16534580 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16534646 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2061;AVGPOST=0.9977;RSQ=0.9960;ERATE=0.0007;THETA=0.0005;AC=452;AN=2184 GT:DS:GL:BD 0.20695971 0
1 16534647 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16534648 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16534696 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16534708 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.8291;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16534730 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2196;AVGPOST=0.9995;RSQ=0.9991;ERATE=0.0003;THETA=0.0006;AC=480;AN=2184 GT:DS:GL:BD 0.21978022 0
1 16534731 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16534733 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16534750 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16534877 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8495;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16534921 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2198;AVGPOST=0.9989;RSQ=0.9977;ERATE=0.0003;THETA=0.0008;AC=480;AN=2184 GT:DS:GL:BD 0.21978022 0
1 16534931 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0005;AVGPOST=0.9992;RSQ=0.3910;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16535078 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16535117 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16535174 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8476;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16535435 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0008;AVGPOST=0.9998;RSQ=0.8927;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16535487 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0046;AVGPOST=1.0000;RSQ=0.9952;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16535772 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0045;AVGPOST=0.9995;RSQ=0.9541;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16535775 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6913;ERATE=0.0003;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16535804 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.7587;AVGPOST=0.9985;RSQ=0.9971;ERATE=0.0004;THETA=0.0003;AC=1657;AN=2184 GT:DS:GL:BD 0.75869966 1
1 16535885 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.770;LDAF=0.0053;AVGPOST=0.9951;RSQ=0.6314;ERATE=0.0018;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16535984 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.860;LDAF=0.0025;AVGPOST=0.9993;RSQ=0.9031;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16536047 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9704;ERATE=0.0004;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16536105 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16536132 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16536156 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0123;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0010;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 16536307 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8625;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16536403 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.699;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.6267;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16536456 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.0077;AVGPOST=0.9963;RSQ=0.8088;ERATE=0.0007;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 16536543 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.806;LDAF=0.0037;AVGPOST=0.9983;RSQ=0.7886;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16536548 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2127;AVGPOST=0.9957;RSQ=0.9893;ERATE=0.0004;THETA=0.0012;AC=466;AN=2184 GT:DS:GL:BD 0.21336997 0
1 16537072 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0036;AVGPOST=0.9991;RSQ=0.9044;ERATE=0.0003;THETA=0.0014;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16537174 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0454;AVGPOST=0.9982;RSQ=0.9885;ERATE=0.0003;THETA=0.0006;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 16537215 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.5917;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16537289 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7580;AVGPOST=0.9991;RSQ=0.9981;ERATE=0.0003;THETA=0.0010;AC=1655;AN=2184 GT:DS:GL:BD 0.75778389 1
1 16537341 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0278;AVGPOST=0.9991;RSQ=0.9882;ERATE=0.0003;THETA=0.0016;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 16537366 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0491;AVGPOST=0.9995;RSQ=0.9954;ERATE=0.0003;THETA=0.0004;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 16537398 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0020;AVGPOST=0.9986;RSQ=0.7022;ERATE=0.0005;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16537406 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0039;AVGPOST=0.9985;RSQ=0.8441;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16537502 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.865;LDAF=0.0065;AVGPOST=0.9983;RSQ=0.8828;ERATE=0.0003;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 16537609 . CCTCGGT C 1242 PASS INDEL;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0080;AVGPOST=0.9979;RSQ=0.8844;ERATE=0.0003;THETA=0.0012;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 16537626 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9244;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16537652 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16537728 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16537752 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3075;AVGPOST=0.9968;RSQ=0.9958;ERATE=0.0004;THETA=0.0018;AC=671;AN=2184 GT:DS:GL:BD 0.30723444 0
1 16537781 rs5772661 CTT C 22595 PASS INDEL;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2307;AVGPOST=0.9975;RSQ=0.9950;ERATE=0.0005;THETA=0.0005;AC=504;AN=2184 GT:DS:GL:BD 0.23076923 0
1 16537835 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5077;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16537854 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0155;AVGPOST=0.9991;RSQ=0.9780;ERATE=0.0004;THETA=0.0019;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 16537902 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.833;LDAF=0.0081;AVGPOST=0.9979;RSQ=0.8996;ERATE=0.0004;THETA=0.0032;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 16538066 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0426;AVGPOST=0.9990;RSQ=0.9929;ERATE=0.0003;THETA=0.0007;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 16538081 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0085;AVGPOST=0.9981;RSQ=0.9050;ERATE=0.0004;THETA=0.0015;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 16538093 rs34693808 CA C 9940 PASS INDEL;BAVGPOST=0.971;BRSQ=0.935;LDAF=0.2525;AVGPOST=0.9811;RSQ=0.9676;ERATE=0.0005;THETA=0.0005;AC=560;AN=2184 GT:DS:GL:BD 0.25641027 0
1 16538096 . GGAA G 20757 PASS INDEL;BAVGPOST=0.971;BRSQ=0.938;LDAF=0.2558;AVGPOST=0.9825;RSQ=0.9710;ERATE=0.0005;THETA=0.0021;AC=564;AN=2184 GT:DS:GL:BD 0.25824177 0
1 16538097 rs34064593 GAA G 14489 PASS INDEL;BAVGPOST=0.971;BRSQ=0.935;LDAF=0.2517;AVGPOST=0.9812;RSQ=0.9686;ERATE=0.0004;THETA=0.0089;AC=557;AN=2184 GT:DS:GL:BD 0.25503662 0
1 16538272 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.970;LDAF=0.0427;AVGPOST=0.9963;RSQ=0.9664;ERATE=0.0004;THETA=0.0004;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 16538296 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16538345 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.0836;AVGPOST=0.9991;RSQ=0.9950;ERATE=0.0004;THETA=0.0004;AC=182;AN=2184 GT:DS:GL:BD 0.08333334 0
1 16538346 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6160;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16538364 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0342;AVGPOST=0.9992;RSQ=0.9902;ERATE=0.0004;THETA=0.0006;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 16538366 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0339;AVGPOST=0.9999;RSQ=0.9982;ERATE=0.0003;THETA=0.0007;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 16538499 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6445;ERATE=0.0003;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16538534 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.751;LDAF=0.0040;AVGPOST=0.9983;RSQ=0.8506;ERATE=0.0003;THETA=0.0034;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16538535 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0942;AVGPOST=0.9994;RSQ=0.9968;ERATE=0.0003;THETA=0.0009;AC=205;AN=2184 GT:DS:GL:BD 0.09386447 0
1 16538542 . GCC G 6485 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0343;AVGPOST=0.9989;RSQ=0.9870;ERATE=0.0004;THETA=0.0004;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 16538591 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0339;AVGPOST=0.9997;RSQ=0.9958;ERATE=0.0003;THETA=0.0004;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 16538956 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.697;LDAF=0.0023;AVGPOST=0.9973;RSQ=0.5784;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16539013 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.682;LDAF=0.0059;AVGPOST=0.9959;RSQ=0.6870;ERATE=0.0009;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16539237 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.892;LDAF=0.0045;AVGPOST=0.9982;RSQ=0.8176;ERATE=0.0006;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16539313 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3078;AVGPOST=0.9982;RSQ=0.9969;ERATE=0.0005;THETA=0.0008;AC=673;AN=2184 GT:DS:GL:BD 0.30815017 0
1 16539342 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8118;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16539478 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6392;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16539495 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7063;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16539549 rs112379376 C CATCCCT 10985 PASS INDEL;BAVGPOST=0.991;BRSQ=0.896;LDAF=0.0484;AVGPOST=0.9957;RSQ=0.9671;ERATE=0.0006;THETA=0.0008;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 16539560 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.918;LDAF=0.0185;AVGPOST=0.9966;RSQ=0.9254;ERATE=0.0006;THETA=0.0006;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 16539577 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3076;AVGPOST=0.9986;RSQ=0.9979;ERATE=0.0004;THETA=0.0005;AC=673;AN=2184 GT:DS:GL:BD 0.30815017 0
1 16539591 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.7194;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16539671 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0492;AVGPOST=0.9991;RSQ=0.9922;ERATE=0.0005;THETA=0.0008;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 16539678 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5825;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16539709 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0489;AVGPOST=0.9997;RSQ=0.9971;ERATE=0.0003;THETA=0.0003;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 16539813 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1803;AVGPOST=0.9988;RSQ=0.9967;ERATE=0.0005;THETA=0.0007;AC=394;AN=2184 GT:DS:GL:BD 0.18040293 0
1 16539997 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6408;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16540034 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7560;ERATE=0.0003;THETA=0.0043;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16540173 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0019;AVGPOST=0.9975;RSQ=0.4847;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16540206 rs79882388 A AATTTT 6250 PASS INDEL;BAVGPOST=0.960;BRSQ=0.695;LDAF=0.0944;AVGPOST=0.9276;RSQ=0.6723;ERATE=0.0103;THETA=0.0007;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 16540222 . AT A 52 PASS INDEL;BAVGPOST=0.993;BRSQ=0.541;LDAF=0.0183;AVGPOST=0.9773;RSQ=0.4964;ERATE=0.0039;THETA=0.0045;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 16540227 . A AT 2937 PASS INDEL;BAVGPOST=0.966;BRSQ=0.692;LDAF=0.0910;AVGPOST=0.9294;RSQ=0.6589;ERATE=0.0075;THETA=0.0008;AC=162;AN=2184 GT:DS:GL:BD 0.07417583 0
1 16540258 . TA T 179 PASS INDEL;BAVGPOST=0.977;BRSQ=0.420;LDAF=0.0356;AVGPOST=0.9506;RSQ=0.4376;ERATE=0.0040;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 16540273 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.428;LDAF=0.0370;AVGPOST=0.9478;RSQ=0.4278;ERATE=0.0084;THETA=0.0014;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 16540297 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.717;LDAF=0.0026;AVGPOST=0.9980;RSQ=0.7050;ERATE=0.0003;THETA=0.0020;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16540374 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.777;LDAF=0.0087;AVGPOST=0.9934;RSQ=0.6986;ERATE=0.0007;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 16540490 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.928;LDAF=0.0197;AVGPOST=0.9916;RSQ=0.8240;ERATE=0.0005;THETA=0.0006;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 16540582 . TA T 170 PASS INDEL;BAVGPOST=0.999;BRSQ=0.679;LDAF=0.0031;AVGPOST=0.9975;RSQ=0.7122;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16540660 . C CT 12 PASS INDEL;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16540743 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0025;AVGPOST=0.9984;RSQ=0.7533;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16540891 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.683;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.7562;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16540941 . G GT 754 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0061;AVGPOST=0.9995;RSQ=0.9720;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 16541061 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16541147 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0431;AVGPOST=0.9993;RSQ=0.9930;ERATE=0.0004;THETA=0.0018;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 16541177 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0017;AVGPOST=0.9986;RSQ=0.6543;ERATE=0.0003;THETA=0.0042;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16541264 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.975;LDAF=0.0359;AVGPOST=0.9979;RSQ=0.9783;ERATE=0.0004;THETA=0.0007;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 16541278 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7851;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16541625 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0542;AVGPOST=0.9983;RSQ=0.9872;ERATE=0.0004;THETA=0.0015;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 16541650 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.688;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4859;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16541774 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4567;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16541776 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1532;AVGPOST=0.9947;RSQ=0.9849;ERATE=0.0007;THETA=0.0006;AC=334;AN=2184 GT:DS:GL:BD 0.15293041 0
1 16541876 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6025;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16541890 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5571;ERATE=0.0004;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16541897 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0558;AVGPOST=0.9988;RSQ=0.9919;ERATE=0.0004;THETA=0.0026;AC=122;AN=2184 GT:DS:GL:BD 0.05586081 0
1 16541962 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.941;LDAF=0.2907;AVGPOST=0.9800;RSQ=0.9684;ERATE=0.0022;THETA=0.0013;AC=638;AN=2184 GT:DS:GL:BD 0.29212454 0
1 16542026 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0049;AVGPOST=0.9994;RSQ=0.9419;ERATE=0.0005;THETA=0.0010;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16542089 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.478;LDAF=0.0041;AVGPOST=0.9943;RSQ=0.4065;ERATE=0.0012;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16542320 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5682;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16542343 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.909;LDAF=0.0049;AVGPOST=0.9984;RSQ=0.8735;ERATE=0.0004;THETA=0.0013;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16542366 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0494;AVGPOST=0.9996;RSQ=0.9966;ERATE=0.0003;THETA=0.0006;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 16542526 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0064;AVGPOST=0.9990;RSQ=0.9407;ERATE=0.0003;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 16542534 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0006;AVGPOST=0.9992;RSQ=0.4278;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16542552 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0001;AVGPOST=0.9998;RSQ=0.0698;ERATE=0.0003;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 16542811 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8621;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16542835 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2994;AVGPOST=0.9979;RSQ=0.9967;ERATE=0.0005;THETA=0.0005;AC=654;AN=2184 GT:DS:GL:BD 0.29945055 0
1 16542876 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2993;AVGPOST=0.9971;RSQ=0.9954;ERATE=0.0005;THETA=0.0029;AC=654;AN=2184 GT:DS:GL:BD 0.29945055 0
1 16542937 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.993;LDAF=0.2991;AVGPOST=0.9936;RSQ=0.9901;ERATE=0.0008;THETA=0.0004;AC=653;AN=2184 GT:DS:GL:BD 0.29899266 0
1 16542947 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6603;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16543175 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.9881;AVGPOST=0.9981;RSQ=0.9431;ERATE=0.0003;THETA=0.0007;AC=2158;AN=2184 GT:DS:GL:BD 0.98809522 1
1 16543226 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0013;AVGPOST=0.9996;RSQ=0.8908;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16543346 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3062;AVGPOST=0.9984;RSQ=0.9973;ERATE=0.0006;THETA=0.0037;AC=669;AN=2184 GT:DS:GL:BD 0.30631867 0
1 16543390 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0495;AVGPOST=0.9995;RSQ=0.9958;ERATE=0.0003;THETA=0.0007;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 16543397 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.6596;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16543456 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0042;AVGPOST=0.9997;RSQ=0.9643;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16543517 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6448;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16543539 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9721;ERATE=0.0004;THETA=0.0011;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16543544 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0565;AVGPOST=0.9984;RSQ=0.9887;ERATE=0.0004;THETA=0.0006;AC=124;AN=2184 GT:DS:GL:BD 0.05677656 0
1 16543562 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8568;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16543631 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.832;LDAF=0.0076;AVGPOST=0.9968;RSQ=0.8311;ERATE=0.0009;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 16543736 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0097;AVGPOST=0.9989;RSQ=0.9502;ERATE=0.0005;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 16543892 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4749;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16543902 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0515;AVGPOST=0.9971;RSQ=0.9767;ERATE=0.0008;THETA=0.0007;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 16544174 . CA C 1427 PASS INDEL;BAVGPOST=0.988;BRSQ=0.851;LDAF=0.0364;AVGPOST=0.9906;RSQ=0.9070;ERATE=0.0011;THETA=0.0017;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 16544382 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1596;AVGPOST=0.9938;RSQ=0.9845;ERATE=0.0005;THETA=0.0007;AC=347;AN=2184 GT:DS:GL:BD 0.15888278 0
1 16544428 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0033;AVGPOST=0.9977;RSQ=0.7282;ERATE=0.0005;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16544487 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0551;AVGPOST=0.9978;RSQ=0.9859;ERATE=0.0004;THETA=0.0041;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 16544520 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4922;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16544546 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.726;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4902;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16544624 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0120;AVGPOST=0.9984;RSQ=0.9516;ERATE=0.0004;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 16544626 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0494;AVGPOST=0.9990;RSQ=0.9916;ERATE=0.0005;THETA=0.0011;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 16544669 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.870;LDAF=0.0030;AVGPOST=0.9986;RSQ=0.8004;ERATE=0.0004;THETA=0.0015;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16544686 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9789;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16544738 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0013;AVGPOST=0.9997;RSQ=0.8897;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16544749 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5006;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16544858 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6760;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16544931 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.812;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.8331;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16545008 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0155;AVGPOST=0.9990;RSQ=0.9754;ERATE=0.0004;THETA=0.0007;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 16545069 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=0.9990;RSQ=0.9320;ERATE=0.0004;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 16545107 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6583;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16545202 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7520;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16545395 . AG A 18 PASS INDEL;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6315;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16545419 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0183;AVGPOST=0.9999;RSQ=0.9979;ERATE=0.0003;THETA=0.0007;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 16545454 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7109;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16545474 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.776;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5412;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16545487 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8057;ERATE=0.0003;THETA=0.0033;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16545648 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0043;AVGPOST=0.9965;RSQ=0.7029;ERATE=0.0004;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16545669 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16545876 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5640;ERATE=0.0004;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16545978 . A AC 22 PASS INDEL;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.5235;ERATE=0.0006;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16546066 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0024;AVGPOST=0.9992;RSQ=0.8512;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16546330 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.773;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4885;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16546380 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0079;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16546452 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0500;AVGPOST=0.9995;RSQ=0.9955;ERATE=0.0003;THETA=0.0009;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 16546493 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0125;AVGPOST=0.9995;RSQ=0.9836;ERATE=0.0003;THETA=0.0016;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 16546514 rs35225769 T TC 40112 PASS INDEL;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2953;AVGPOST=0.9952;RSQ=0.9923;ERATE=0.0006;THETA=0.0006;AC=643;AN=2184 GT:DS:GL:BD 0.29441392 0
1 16546561 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16546618 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7336;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16546682 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9890;ERATE=0.0003;THETA=0.0009;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 16546747 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0307;AVGPOST=0.9996;RSQ=0.9945;ERATE=0.0003;THETA=0.0006;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 16546930 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16546966 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1927;AVGPOST=0.9980;RSQ=0.9944;ERATE=0.0004;THETA=0.0007;AC=420;AN=2184 GT:DS:GL:BD 0.19230770 0
1 16547159 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7490;ERATE=0.0005;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16547243 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0307;AVGPOST=0.9997;RSQ=0.9956;ERATE=0.0004;THETA=0.0010;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 16547331 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9149;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16547345 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7661;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16547426 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9250;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16547563 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6583;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16547620 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9905;ERATE=0.0003;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16547693 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9049;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16547733 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16547755 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0041;AVGPOST=0.9993;RSQ=0.9290;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16547783 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6639;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16547813 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16547830 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0508;AVGPOST=0.9998;RSQ=0.9984;ERATE=0.0003;THETA=0.0005;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 16547948 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0311;AVGPOST=0.9989;RSQ=0.9904;ERATE=0.0003;THETA=0.0014;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 16548042 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0101;AVGPOST=1.0000;RSQ=0.9978;ERATE=0.0003;THETA=0.0011;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 16548071 . AGGAT A 89 PASS INDEL;BAVGPOST=0.994;BRSQ=0.665;LDAF=0.0155;AVGPOST=0.9826;RSQ=0.5441;ERATE=0.0052;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 16548141 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8299;ERATE=0.0010;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16548236 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16548237 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9429;ERATE=0.0003;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16548334 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16548351 . AGGAT A 65286 PASS INDEL;BAVGPOST=0.990;BRSQ=0.985;LDAF=0.4107;AVGPOST=0.9857;RSQ=0.9816;ERATE=0.0031;THETA=0.0008;AC=898;AN=2184 GT:DS:GL:BD 0.41117215 0
1 16548505 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0125;AVGPOST=0.9996;RSQ=0.9855;ERATE=0.0003;THETA=0.0007;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 16548735 . TG T 1442 PASS INDEL;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0168;AVGPOST=0.9963;RSQ=0.9102;ERATE=0.0003;THETA=0.0005;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 16548763 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16548778 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0200;AVGPOST=0.9989;RSQ=0.9781;ERATE=0.0004;THETA=0.0007;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 16548825 . TC T 122 PASS INDEL;BAVGPOST=0.999;BRSQ=0.585;LDAF=0.0045;AVGPOST=0.9976;RSQ=0.7580;ERATE=0.0006;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16548841 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0037;AVGPOST=0.9990;RSQ=0.8781;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16548913 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.5917;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16549042 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.5770;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16549188 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0208;AVGPOST=0.9979;RSQ=0.9629;ERATE=0.0005;THETA=0.0007;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 16549202 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0315;AVGPOST=0.9981;RSQ=0.9796;ERATE=0.0004;THETA=0.0005;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 16549235 . AAAT A 30 PASS INDEL;BAVGPOST=0.999;BRSQ=0.730;LDAF=0.0051;AVGPOST=0.9939;RSQ=0.5884;ERATE=0.0008;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16549245 rs34603965 AAATT A 16166 PASS INDEL;BAVGPOST=0.996;BRSQ=0.988;LDAF=0.1921;AVGPOST=0.9958;RSQ=0.9889;ERATE=0.0009;THETA=0.0006;AC=417;AN=2184 GT:DS:GL:BD 0.19093406 0
1 16549294 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2234;AVGPOST=0.9975;RSQ=0.9932;ERATE=0.0008;THETA=0.0004;AC=487;AN=2184 GT:DS:GL:BD 0.22298534 0
1 16549348 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0340;AVGPOST=0.9980;RSQ=0.9768;ERATE=0.0005;THETA=0.0004;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 16549352 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.572;LDAF=0.0032;AVGPOST=0.9973;RSQ=0.6824;ERATE=0.0006;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16549464 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.837;LDAF=0.0036;AVGPOST=0.9965;RSQ=0.6443;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16549490 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0078;AVGPOST=0.9985;RSQ=0.9221;ERATE=0.0004;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 16549532 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.984;LDAF=0.7156;AVGPOST=0.9892;RSQ=0.9794;ERATE=0.0007;THETA=0.0006;AC=1564;AN=2184 GT:DS:GL:BD 0.71611720 1
1 16549560 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.944;LDAF=0.0533;AVGPOST=0.9936;RSQ=0.9553;ERATE=0.0007;THETA=0.0003;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 16549615 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2939;AVGPOST=0.9964;RSQ=0.9943;ERATE=0.0004;THETA=0.0004;AC=642;AN=2184 GT:DS:GL:BD 0.29395604 0
1 16549716 . AATTTTTGT A 553 PASS INDEL;BAVGPOST=0.998;BRSQ=0.757;LDAF=0.0056;AVGPOST=0.9964;RSQ=0.7500;ERATE=0.0006;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16550072 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0015;AVGPOST=0.9990;RSQ=0.6991;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16550145 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9362;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16550152 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0020;AVGPOST=0.9977;RSQ=0.4968;ERATE=0.0007;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16550387 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.666;LDAF=0.0013;AVGPOST=0.9994;RSQ=0.7959;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16550398 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.904;LDAF=0.0115;AVGPOST=0.9969;RSQ=0.8905;ERATE=0.0007;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 16550500 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0121;AVGPOST=0.9996;RSQ=0.9850;ERATE=0.0003;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 16550502 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0508;AVGPOST=0.9999;RSQ=0.9988;ERATE=0.0003;THETA=0.0004;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 16550558 . TAAAC T 84 PASS INDEL;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5790;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16550602 . A AT 2807 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0197;AVGPOST=0.9997;RSQ=0.9937;ERATE=0.0003;THETA=0.0005;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 16550673 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7141;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16550694 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0197;AVGPOST=0.9997;RSQ=0.9938;ERATE=0.0003;THETA=0.0006;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 16550706 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0197;AVGPOST=0.9997;RSQ=0.9937;ERATE=0.0004;THETA=0.0008;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 16550716 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0334;AVGPOST=0.9989;RSQ=0.9869;ERATE=0.0004;THETA=0.0001;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 16550759 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6396;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16550879 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.678;LDAF=0.0033;AVGPOST=0.9993;RSQ=0.9028;ERATE=0.0004;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16550936 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.924;LDAF=0.0083;AVGPOST=0.9976;RSQ=0.9164;ERATE=0.0003;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 16551044 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0013;AVGPOST=0.9997;RSQ=0.9087;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16551158 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0198;AVGPOST=0.9997;RSQ=0.9927;ERATE=0.0003;THETA=0.0008;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 16551195 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8594;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16551354 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7477;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16551373 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1923;AVGPOST=0.9992;RSQ=0.9977;ERATE=0.0003;THETA=0.0004;AC=420;AN=2184 GT:DS:GL:BD 0.19230770 0
1 16551425 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8538;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16551484 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6564;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16551507 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2944;AVGPOST=0.9983;RSQ=0.9972;ERATE=0.0004;THETA=0.0003;AC=644;AN=2184 GT:DS:GL:BD 0.29487181 0
1 16551648 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.2937;AVGPOST=0.9977;RSQ=0.9961;ERATE=0.0005;THETA=0.0004;AC=641;AN=2184 GT:DS:GL:BD 0.29349816 0
1 16551657 . AG A 114 PASS INDEL;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8152;ERATE=0.0004;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16551677 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16551708 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16551716 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0208;AVGPOST=0.9986;RSQ=0.9747;ERATE=0.0004;THETA=0.0010;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 16551859 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2937;AVGPOST=0.9986;RSQ=0.9975;ERATE=0.0004;THETA=0.0004;AC=641;AN=2184 GT:DS:GL:BD 0.29349816 0
1 16552080 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0029;AVGPOST=0.9987;RSQ=0.8287;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16552144 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.875;LDAF=0.0069;AVGPOST=0.9977;RSQ=0.8970;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16552219 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.967;LDAF=0.0210;AVGPOST=0.9975;RSQ=0.9534;ERATE=0.0009;THETA=0.0005;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 16552286 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.666;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5072;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16552411 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16552416 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2934;AVGPOST=0.9994;RSQ=0.9988;ERATE=0.0004;THETA=0.0007;AC=641;AN=2184 GT:DS:GL:BD 0.29349816 0
1 16552449 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.850;LDAF=0.0070;AVGPOST=0.9988;RSQ=0.9332;ERATE=0.0004;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16552470 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=0.9980;RSQ=0.6956;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16552503 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0013;AVGPOST=0.9980;RSQ=0.4553;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16552512 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0204;AVGPOST=0.9985;RSQ=0.9766;ERATE=0.0004;THETA=0.0003;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 16552516 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0184;AVGPOST=0.9997;RSQ=0.9922;ERATE=0.0004;THETA=0.0007;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 16552624 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0503;AVGPOST=0.9990;RSQ=0.9920;ERATE=0.0003;THETA=0.0003;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 16552707 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.0504;AVGPOST=0.9987;RSQ=0.9916;ERATE=0.0003;THETA=0.0005;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 16552772 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.2931;AVGPOST=0.9990;RSQ=0.9985;ERATE=0.0003;THETA=0.0006;AC=641;AN=2184 GT:DS:GL:BD 0.29349816 0
1 16552789 . GCCCAT G 276 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8303;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16552961 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0307;AVGPOST=0.9999;RSQ=0.9981;ERATE=0.0003;THETA=0.0005;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 16553178 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5044;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16553274 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.733;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.7640;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16553524 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.509;LDAF=0.0045;AVGPOST=0.9947;RSQ=0.5469;ERATE=0.0007;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16553570 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.989;LDAF=0.1929;AVGPOST=0.9925;RSQ=0.9818;ERATE=0.0012;THETA=0.0003;AC=420;AN=2184 GT:DS:GL:BD 0.19230770 0
1 16553833 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2922;AVGPOST=0.9974;RSQ=0.9953;ERATE=0.0006;THETA=0.0008;AC=639;AN=2184 GT:DS:GL:BD 0.29258242 0
1 16554226 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0014;AVGPOST=0.9979;RSQ=0.4201;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16554273 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0192;AVGPOST=0.9987;RSQ=0.9735;ERATE=0.0003;THETA=0.0005;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 16554328 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0166;AVGPOST=0.9978;RSQ=0.9587;ERATE=0.0003;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 16554329 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0158;AVGPOST=0.9992;RSQ=0.9786;ERATE=0.0003;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 16554338 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0018;AVGPOST=0.9978;RSQ=0.4806;ERATE=0.0006;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16554370 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.582;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5361;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16554523 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4045;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16554643 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0025;AVGPOST=0.9973;RSQ=0.5706;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16554700 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0034;AVGPOST=0.9978;RSQ=0.7647;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16554941 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.617;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6782;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16555066 . G GT 100 PASS INDEL;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0021;AVGPOST=0.9973;RSQ=0.5504;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16555105 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.983;LDAF=0.2228;AVGPOST=0.9885;RSQ=0.9758;ERATE=0.0018;THETA=0.0006;AC=481;AN=2184 GT:DS:GL:BD 0.22023809 0
1 16555112 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0309;AVGPOST=0.9993;RSQ=0.9903;ERATE=0.0004;THETA=0.0006;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 16555182 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5882;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16555204 . GCC G 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6200;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16555317 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16555465 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0069;AVGPOST=0.9990;RSQ=0.9449;ERATE=0.0003;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 16555466 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6550;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16555566 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.967;LDAF=0.2888;AVGPOST=0.9890;RSQ=0.9841;ERATE=0.0009;THETA=0.0003;AC=627;AN=2184 GT:DS:GL:BD 0.28708792 0
1 16555706 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.956;LDAF=0.0504;AVGPOST=0.9973;RSQ=0.9791;ERATE=0.0006;THETA=0.0016;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 16555882 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2239;AVGPOST=0.9986;RSQ=0.9966;ERATE=0.0005;THETA=0.0005;AC=488;AN=2184 GT:DS:GL:BD 0.22344323 0
1 16555898 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5817;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16555972 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.946;LDAF=0.0528;AVGPOST=0.9944;RSQ=0.9567;ERATE=0.0008;THETA=0.0005;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 16556126 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8300;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16556212 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7863;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16556280 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0160;AVGPOST=0.9975;RSQ=0.9443;ERATE=0.0005;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 16556289 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0503;AVGPOST=0.9990;RSQ=0.9914;ERATE=0.0003;THETA=0.0005;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 16556334 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.724;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5836;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16556340 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7853;ERATE=0.0005;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16556405 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7192;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16556409 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0203;AVGPOST=0.9990;RSQ=0.9832;ERATE=0.0003;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 16556462 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9572;ERATE=0.0003;THETA=0.0028;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 16556468 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4596;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16556472 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.707;LDAF=0.0023;AVGPOST=0.9972;RSQ=0.5094;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16556554 . C CT 1184 PASS INDEL;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0093;AVGPOST=0.9957;RSQ=0.8293;ERATE=0.0004;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 16556597 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.650;LDAF=0.0044;AVGPOST=0.9965;RSQ=0.7257;ERATE=0.0004;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16556623 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.7683;AVGPOST=0.9947;RSQ=0.9887;ERATE=0.0003;THETA=0.0004;AC=1678;AN=2184 GT:DS:GL:BD 0.76831502 1
1 16556647 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1944;AVGPOST=0.9963;RSQ=0.9914;ERATE=0.0004;THETA=0.0004;AC=421;AN=2184 GT:DS:GL:BD 0.19276556 0
1 16556687 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0053;AVGPOST=0.9986;RSQ=0.9110;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16556732 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0033;AVGPOST=0.9970;RSQ=0.6574;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16556736 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0044;AVGPOST=0.9986;RSQ=0.8851;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16556767 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5888;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16556786 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2234;AVGPOST=0.9988;RSQ=0.9972;ERATE=0.0003;THETA=0.0007;AC=488;AN=2184 GT:DS:GL:BD 0.22344323 0
1 16557009 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8859;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16557046 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9187;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16557188 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0197;AVGPOST=0.9998;RSQ=0.9958;ERATE=0.0003;THETA=0.0002;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 16557189 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5584;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16557215 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0306;AVGPOST=0.9994;RSQ=0.9918;ERATE=0.0003;THETA=0.0003;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 16557224 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0187;AVGPOST=0.9991;RSQ=0.9817;ERATE=0.0004;THETA=0.0005;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 16557226 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0509;AVGPOST=0.9995;RSQ=0.9956;ERATE=0.0003;THETA=0.0003;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 16557267 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.756;LDAF=0.0024;AVGPOST=0.9986;RSQ=0.7633;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16557293 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8712;ERATE=0.0004;THETA=0.0023;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16557390 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.1941;AVGPOST=0.9968;RSQ=0.9913;ERATE=0.0007;THETA=0.0002;AC=424;AN=2184 GT:DS:GL:BD 0.19413920 0
1 16557551 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.638;LDAF=0.0016;AVGPOST=0.9976;RSQ=0.3747;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16557567 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.640;LDAF=0.0042;AVGPOST=0.9964;RSQ=0.6665;ERATE=0.0007;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16557584 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0326;AVGPOST=0.9974;RSQ=0.9725;ERATE=0.0004;THETA=0.0004;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 16557614 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0233;AVGPOST=0.9982;RSQ=0.9693;ERATE=0.0005;THETA=0.0006;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 16557623 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0034;AVGPOST=0.9991;RSQ=0.8868;ERATE=0.0005;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16557691 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1949;AVGPOST=0.9974;RSQ=0.9927;ERATE=0.0008;THETA=0.0005;AC=425;AN=2184 GT:DS:GL:BD 0.19459707 0
1 16557821 . G GGA 4611 PASS INDEL;BAVGPOST=0.982;BRSQ=0.924;LDAF=0.1361;AVGPOST=0.9863;RSQ=0.9572;ERATE=0.0004;THETA=0.0007;AC=300;AN=2184 GT:DS:GL:BD 0.13736264 0
1 16557823 rs60878219 A AG 2646 PASS INDEL;BAVGPOST=0.982;BRSQ=0.925;LDAF=0.1357;AVGPOST=0.9861;RSQ=0.9567;ERATE=0.0005;THETA=0.0007;AC=298;AN=2184 GT:DS:GL:BD 0.13644689 0
1 16557864 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0308;AVGPOST=0.9991;RSQ=0.9884;ERATE=0.0004;THETA=0.0003;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 16557876 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.802;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.5928;ERATE=0.0007;THETA=0.0027;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16558056 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.941;LDAF=0.0242;AVGPOST=0.9977;RSQ=0.9621;ERATE=0.0004;THETA=0.0005;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 16558142 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0060;AVGPOST=0.9989;RSQ=0.9196;ERATE=0.0004;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 16558173 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16558327 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0051;AVGPOST=0.9997;RSQ=0.9745;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16558398 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0169;AVGPOST=0.9990;RSQ=0.9783;ERATE=0.0003;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 16558400 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0507;AVGPOST=0.9998;RSQ=0.9985;ERATE=0.0003;THETA=0.0006;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 16558493 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0306;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 16558585 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16558696 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0293;AVGPOST=0.9998;RSQ=0.9973;ERATE=0.0003;THETA=0.0006;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 16558697 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16558699 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16558828 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0017;AVGPOST=0.9995;RSQ=0.8942;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16558838 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4151;AVGPOST=0.9980;RSQ=0.9974;ERATE=0.0003;THETA=0.0004;AC=906;AN=2184 GT:DS:GL:BD 0.41483516 0
1 16558847 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7189;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16558903 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16558924 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16558975 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0146;AVGPOST=1.0000;RSQ=0.9985;ERATE=0.0003;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 16558976 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0306;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 16559003 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 16559044 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16559137 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16559200 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0306;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 16559237 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0507;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0010;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 16559250 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16559258 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0197;AVGPOST=0.9999;RSQ=0.9979;ERATE=0.0003;THETA=0.0003;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 16559260 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0041;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16559403 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0068;AVGPOST=1.0000;RSQ=0.9968;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16559424 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16559458 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16559461 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9181;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16559541 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.3141;AVGPOST=0.9999;RSQ=0.9997;ERATE=0.0003;THETA=0.0004;AC=686;AN=2184 GT:DS:GL:BD 0.31410256 0
1 16559608 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9460;ERATE=0.0015;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16559655 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16559719 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0093;AVGPOST=0.9996;RSQ=0.9827;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 16559752 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9558;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16559782 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16560031 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0055;AVGPOST=0.9999;RSQ=0.9921;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 16560044 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0152;AVGPOST=0.9998;RSQ=0.9948;ERATE=0.0003;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 16560232 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16560323 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0013;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16560366 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.800;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7843;ERATE=0.0012;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16560447 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0151;AVGPOST=1.0000;RSQ=0.9987;ERATE=0.0003;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 16560495 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0293;AVGPOST=0.9999;RSQ=0.9980;ERATE=0.0003;THETA=0.0008;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 16560499 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6174;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16560656 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0073;AVGPOST=0.9964;RSQ=0.8163;ERATE=0.0004;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 16560731 . C CA 34 PASS INDEL;BAVGPOST=0.992;BRSQ=0.508;LDAF=0.0188;AVGPOST=0.9767;RSQ=0.5142;ERATE=0.0038;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 16560732 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.627;LDAF=0.0051;AVGPOST=0.9939;RSQ=0.5647;ERATE=0.0006;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16560846 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0031;AVGPOST=0.9976;RSQ=0.6814;ERATE=0.0006;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16560884 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9448;ERATE=0.0004;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16560902 . AT A 90 PASS INDEL;BAVGPOST=0.993;BRSQ=0.706;LDAF=0.0166;AVGPOST=0.9934;RSQ=0.8492;ERATE=0.0008;THETA=0.0007;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 16560903 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.926;LDAF=0.0175;AVGPOST=0.9984;RSQ=0.9647;ERATE=0.0005;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 16560963 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.876;LDAF=0.0070;AVGPOST=0.9990;RSQ=0.9276;ERATE=0.0003;THETA=0.0012;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16561014 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.3138;AVGPOST=0.9973;RSQ=0.9953;ERATE=0.0005;THETA=0.0003;AC=686;AN=2184 GT:DS:GL:BD 0.31410256 0
1 16561028 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.7119;AVGPOST=0.9944;RSQ=0.9902;ERATE=0.0010;THETA=0.0007;AC=1554;AN=2184 GT:DS:GL:BD 0.71153843 1
1 16561179 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2140;AVGPOST=0.9992;RSQ=0.9979;ERATE=0.0003;THETA=0.0004;AC=467;AN=2184 GT:DS:GL:BD 0.21382783 0
1 16561257 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.724;LDAF=0.0198;AVGPOST=0.9943;RSQ=0.8789;ERATE=0.0008;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 16561308 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0244;AVGPOST=0.9972;RSQ=0.9616;ERATE=0.0004;THETA=0.0007;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 16561348 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0030;AVGPOST=0.9985;RSQ=0.7765;ERATE=0.0005;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16561448 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0162;AVGPOST=0.9976;RSQ=0.9434;ERATE=0.0004;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 16561824 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0442;AVGPOST=0.9994;RSQ=0.9938;ERATE=0.0004;THETA=0.0003;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 16561989 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16562079 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7150;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16562112 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.5676;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16562235 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0269;AVGPOST=0.9991;RSQ=0.9844;ERATE=0.0005;THETA=0.0005;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 16562285 . C CCTGCCTCA 1199 PASS INDEL;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0046;AVGPOST=0.9990;RSQ=0.8945;ERATE=0.0005;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16562293 . A ACT 67 PASS INDEL;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0051;AVGPOST=0.9980;RSQ=0.8146;ERATE=0.0006;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16562332 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.970;LDAF=0.0436;AVGPOST=0.9972;RSQ=0.9753;ERATE=0.0005;THETA=0.0003;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 16562405 . A ACCT 54 PASS INDEL;BAVGPOST=1.000;BRSQ=0.731;LDAF=0.0040;AVGPOST=0.9971;RSQ=0.6916;ERATE=0.0006;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16562509 . T TA 60 PASS INDEL;BAVGPOST=0.999;BRSQ=0.647;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5835;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16562658 . GC G 135 PASS INDEL;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0051;AVGPOST=0.9979;RSQ=0.8282;ERATE=0.0004;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16562968 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7134;AVGPOST=0.9984;RSQ=0.9968;ERATE=0.0003;THETA=0.0002;AC=1557;AN=2184 GT:DS:GL:BD 0.71291208 1
1 16563024 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16563069 . ACT A 354 PASS INDEL;BAVGPOST=0.998;BRSQ=0.815;LDAF=0.0056;AVGPOST=0.9990;RSQ=0.9170;ERATE=0.0005;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 16563098 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9738;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16563190 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8540;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16563445 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0007;AVGPOST=0.9990;RSQ=0.5106;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16563534 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.979;LDAF=0.0434;AVGPOST=0.9979;RSQ=0.9831;ERATE=0.0005;THETA=0.0005;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 16563563 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.945;LDAF=0.0439;AVGPOST=0.9924;RSQ=0.9360;ERATE=0.0005;THETA=0.0005;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 16563635 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.976;LDAF=0.7525;AVGPOST=0.9798;RSQ=0.9588;ERATE=0.0016;THETA=0.0007;AC=1657;AN=2184 GT:DS:GL:BD 0.75869966 1
1 16563858 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.654;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6092;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16563963 . T TA 579 PASS INDEL;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0040;AVGPOST=0.9982;RSQ=0.8208;ERATE=0.0005;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16564175 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9280;ERATE=0.0003;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16564207 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7878;ERATE=0.0003;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16564299 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5464;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16564379 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0032;AVGPOST=0.9994;RSQ=0.9216;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16564629 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.952;LDAF=0.0794;AVGPOST=0.9968;RSQ=0.9826;ERATE=0.0003;THETA=0.0003;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 16564757 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0304;AVGPOST=0.9983;RSQ=0.9776;ERATE=0.0005;THETA=0.0007;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 16564777 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0065;AVGPOST=0.9973;RSQ=0.8441;ERATE=0.0005;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 16564829 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6432;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16564863 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.3140;AVGPOST=0.9968;RSQ=0.9942;ERATE=0.0007;THETA=0.0005;AC=687;AN=2184 GT:DS:GL:BD 0.31456044 0
1 16564880 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8667;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16564881 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.739;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5262;ERATE=0.0004;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16564953 rs59129270 C CA 1054 PASS INDEL;BAVGPOST=0.502;BRSQ=0.150;LDAF=0.4161;AVGPOST=0.6452;RSQ=0.3505;ERATE=0.0376;THETA=0.0012;AC=753;AN=2184 GT:DS:GL:BD 0.34478021 0
1 16565086 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.854;LDAF=0.0112;AVGPOST=0.9957;RSQ=0.8557;ERATE=0.0004;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 16565482 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0004;THETA=0.0041;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16565487 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0019;AVGPOST=0.9993;RSQ=0.8299;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16565539 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8832;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16565608 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0503;AVGPOST=0.9992;RSQ=0.9940;ERATE=0.0003;THETA=0.0004;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 16565654 . C CA 2968 PASS INDEL;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0328;AVGPOST=0.9970;RSQ=0.9665;ERATE=0.0005;THETA=0.0008;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 16565831 . CT C 12 PASS INDEL;BAVGPOST=0.999;BRSQ=0.590;LDAF=0.0027;AVGPOST=0.9961;RSQ=0.4217;ERATE=0.0006;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16565858 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.773;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8010;ERATE=0.0006;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16566144 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9333;ERATE=0.0003;THETA=0.0015;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16566162 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.710;LDAF=0.0031;AVGPOST=0.9961;RSQ=0.5237;ERATE=0.0006;THETA=0.0019;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16566198 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.988;LDAF=0.0460;AVGPOST=0.9963;RSQ=0.9694;ERATE=0.0005;THETA=0.0009;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 16566414 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16566487 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16566500 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5809;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16566532 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0023;AVGPOST=0.9995;RSQ=0.9001;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16566580 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6259;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16566612 . AG A 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5888;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16566631 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8303;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16566651 . CTA C 88 PASS INDEL;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6328;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16566772 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.647;LDAF=0.0032;AVGPOST=0.9963;RSQ=0.5262;ERATE=0.0008;THETA=0.0032;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16566785 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0500;AVGPOST=0.9992;RSQ=0.9931;ERATE=0.0003;THETA=0.0005;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 16567049 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8702;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16567063 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.669;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.8945;ERATE=0.0005;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16567120 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4808;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16567169 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.650;LDAF=0.0051;AVGPOST=0.9957;RSQ=0.6666;ERATE=0.0008;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16567296 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.3982;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16567384 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.785;LDAF=0.0061;AVGPOST=0.9966;RSQ=0.7598;ERATE=0.0007;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16567388 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.910;LDAF=0.0091;AVGPOST=0.9984;RSQ=0.9211;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 16567390 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.912;LDAF=0.0107;AVGPOST=0.9971;RSQ=0.8783;ERATE=0.0005;THETA=0.0009;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 16567420 . A AT 3027 PASS INDEL;BAVGPOST=0.995;BRSQ=0.953;LDAF=0.0283;AVGPOST=0.9956;RSQ=0.9417;ERATE=0.0006;THETA=0.0009;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 16567549 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0123;AVGPOST=0.9989;RSQ=0.9647;ERATE=0.0004;THETA=0.0007;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 16567622 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1528;AVGPOST=0.9989;RSQ=0.9968;ERATE=0.0004;THETA=0.0010;AC=335;AN=2184 GT:DS:GL:BD 0.15338828 0
1 16567656 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0008;AVGPOST=0.9998;RSQ=0.8927;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16567732 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.717;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9181;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16567736 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0051;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16567780 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9525;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16567845 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16567943 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16567997 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16568052 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16568093 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16568203 rs58936303 TC T 5466 PASS INDEL;BAVGPOST=0.998;BRSQ=0.968;LDAF=0.0312;AVGPOST=0.9980;RSQ=0.9738;ERATE=0.0005;THETA=0.0013;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 16568271 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0065;AVGPOST=0.9996;RSQ=0.9767;ERATE=0.0004;THETA=0.0034;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 16568366 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.864;LDAF=0.0121;AVGPOST=0.9950;RSQ=0.8360;ERATE=0.0007;THETA=0.0007;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 16568474 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0317;AVGPOST=0.9963;RSQ=0.9567;ERATE=0.0006;THETA=0.0005;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 16568483 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.678;LDAF=0.0029;AVGPOST=0.9973;RSQ=0.6105;ERATE=0.0006;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16568613 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.986;LDAF=0.3200;AVGPOST=0.9940;RSQ=0.9894;ERATE=0.0007;THETA=0.0007;AC=698;AN=2184 GT:DS:GL:BD 0.31959707 0
1 16568619 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0020;AVGPOST=0.9984;RSQ=0.6813;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16568639 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6620;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16568768 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0016;AVGPOST=0.9983;RSQ=0.5830;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16568793 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8835;ERATE=0.0004;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16568821 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.595;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.6046;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16568838 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0021;AVGPOST=0.9990;RSQ=0.8339;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16568882 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0072;AVGPOST=0.9987;RSQ=0.9216;ERATE=0.0003;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 16568922 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.825;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16568942 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.474;LDAF=0.0096;AVGPOST=0.9859;RSQ=0.4528;ERATE=0.0034;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16569015 . A AG 7995 PASS INDEL;BAVGPOST=0.976;BRSQ=0.963;LDAF=0.3169;AVGPOST=0.9900;RSQ=0.9824;ERATE=0.0009;THETA=0.0006;AC=687;AN=2184 GT:DS:GL:BD 0.31456044 0
1 16569018 . G GC 25923 PASS INDEL;BAVGPOST=0.975;BRSQ=0.963;LDAF=0.3207;AVGPOST=0.9897;RSQ=0.9829;ERATE=0.0007;THETA=0.0009;AC=697;AN=2184 GT:DS:GL:BD 0.31913918 0
1 16569154 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8474;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16569156 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5901;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16569327 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16569406 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0504;AVGPOST=0.9995;RSQ=0.9958;ERATE=0.0003;THETA=0.0004;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 16569421 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.4572;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16569424 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16569450 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16569454 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0447;AVGPOST=0.9991;RSQ=0.9913;ERATE=0.0004;THETA=0.0003;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 16569501 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.693;LDAF=0.0019;AVGPOST=0.9974;RSQ=0.4933;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16569542 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0198;AVGPOST=0.9996;RSQ=0.9908;ERATE=0.0003;THETA=0.0005;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 16569613 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0174;AVGPOST=0.9987;RSQ=0.9687;ERATE=0.0004;THETA=0.0006;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 16569629 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0307;AVGPOST=0.9989;RSQ=0.9868;ERATE=0.0004;THETA=0.0009;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 16569662 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6188;ERATE=0.0003;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16569663 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2455;AVGPOST=0.9975;RSQ=0.9944;ERATE=0.0007;THETA=0.0006;AC=537;AN=2184 GT:DS:GL:BD 0.24587911 0
1 16569706 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0054;AVGPOST=0.9995;RSQ=0.9632;ERATE=0.0003;THETA=0.0011;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 16569760 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2197;AVGPOST=0.9983;RSQ=0.9958;ERATE=0.0004;THETA=0.0003;AC=480;AN=2184 GT:DS:GL:BD 0.21978022 0
1 16569766 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0028;AVGPOST=0.9983;RSQ=0.7748;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16569845 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.780;LDAF=0.0027;AVGPOST=0.9986;RSQ=0.7667;ERATE=0.0003;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16569847 . AG A 485 PASS INDEL;BAVGPOST=0.996;BRSQ=0.699;LDAF=0.0065;AVGPOST=0.9962;RSQ=0.7713;ERATE=0.0006;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16569967 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16570013 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0124;AVGPOST=0.9956;RSQ=0.8581;ERATE=0.0010;THETA=0.0008;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 16570076 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7966;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16570161 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.809;LDAF=0.0038;AVGPOST=0.9975;RSQ=0.7595;ERATE=0.0006;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16570184 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.9877;AVGPOST=0.9984;RSQ=0.9402;ERATE=0.0004;THETA=0.0005;AC=2158;AN=2184 GT:DS:GL:BD 0.98809522 1
1 16570284 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0296;AVGPOST=0.9997;RSQ=0.9961;ERATE=0.0003;THETA=0.0008;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 16570311 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0311;AVGPOST=0.9990;RSQ=0.9888;ERATE=0.0004;THETA=0.0006;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 16570584 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7189;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16570602 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5948;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16570612 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8241;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16570618 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16570622 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16570638 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0095;AVGPOST=0.9980;RSQ=0.9161;ERATE=0.0004;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 16570770 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.873;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7666;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16570813 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.826;LDAF=0.0089;AVGPOST=0.9964;RSQ=0.8682;ERATE=0.0004;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 16570839 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2199;AVGPOST=0.9970;RSQ=0.9926;ERATE=0.0008;THETA=0.0010;AC=480;AN=2184 GT:DS:GL:BD 0.21978022 0
1 16570857 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9544;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16570958 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0152;AVGPOST=0.9989;RSQ=0.9723;ERATE=0.0004;THETA=0.0014;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 16571034 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0302;AVGPOST=0.9999;RSQ=0.9987;ERATE=0.0003;THETA=0.0009;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 16571412 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8034;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16571435 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0043;AVGPOST=0.9984;RSQ=0.8669;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16571447 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0056;AVGPOST=0.9991;RSQ=0.9353;ERATE=0.0003;THETA=0.0009;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 16571587 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.656;LDAF=0.0015;AVGPOST=0.9981;RSQ=0.5106;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16571675 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0075;AVGPOST=0.9995;RSQ=0.9680;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 16571813 . CTTTA C 86 PASS INDEL;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5729;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16571838 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0303;AVGPOST=0.9997;RSQ=0.9955;ERATE=0.0003;THETA=0.0003;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 16571856 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.781;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8353;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16571939 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.810;LDAF=0.0020;AVGPOST=0.9985;RSQ=0.6611;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16571974 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0004;THETA=0.0020;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16572089 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.7926;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16572222 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16572267 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0508;AVGPOST=0.9997;RSQ=0.9971;ERATE=0.0003;THETA=0.0004;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 16572271 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9313;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16572349 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16572352 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6589;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16572508 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.933;LDAF=0.0240;AVGPOST=0.9963;RSQ=0.9421;ERATE=0.0005;THETA=0.0007;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 16572667 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5687;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16572754 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0047;AVGPOST=0.9985;RSQ=0.8736;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16573182 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0019;AVGPOST=0.9978;RSQ=0.4963;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16573712 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.0763;AVGPOST=0.9987;RSQ=0.9930;ERATE=0.0003;THETA=0.0009;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 16573763 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16573771 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0013;AVGPOST=0.9998;RSQ=0.9270;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16573856 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16573857 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.8989;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16573971 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16574040 rs34336527 TC T 24928 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2189;AVGPOST=0.9981;RSQ=0.9957;ERATE=0.0005;THETA=0.0008;AC=478;AN=2184 GT:DS:GL:BD 0.21886447 0
1 16574127 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16574159 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.785;LDAF=0.0023;AVGPOST=0.9984;RSQ=0.7742;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16574182 . G GC 409 PASS INDEL;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7975;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16574316 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.7124;AVGPOST=0.9954;RSQ=0.9913;ERATE=0.0004;THETA=0.0003;AC=1555;AN=2184 GT:DS:GL:BD 0.71199632 1
1 16574382 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.987;LDAF=0.2951;AVGPOST=0.9941;RSQ=0.9891;ERATE=0.0013;THETA=0.0004;AC=645;AN=2184 GT:DS:GL:BD 0.29532966 0
1 16574400 rs113589556 AC A 4427 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0266;AVGPOST=0.9988;RSQ=0.9805;ERATE=0.0004;THETA=0.0008;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 16574522 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5411;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16574665 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0003;THETA=0.0019;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16574677 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0050;AVGPOST=0.9989;RSQ=0.9084;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16574679 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0126;AVGPOST=0.9991;RSQ=0.9733;ERATE=0.0004;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 16574835 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0267;AVGPOST=0.9992;RSQ=0.9889;ERATE=0.0003;THETA=0.0006;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 16574912 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0268;AVGPOST=0.9995;RSQ=0.9932;ERATE=0.0003;THETA=0.0004;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 16574963 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16575024 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0168;AVGPOST=0.9960;RSQ=0.9046;ERATE=0.0004;THETA=0.0006;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 16575030 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2188;AVGPOST=0.9981;RSQ=0.9962;ERATE=0.0004;THETA=0.0003;AC=477;AN=2184 GT:DS:GL:BD 0.21840659 0
1 16575162 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.7124;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16575343 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0064;AVGPOST=0.9996;RSQ=0.9747;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 16575478 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16575530 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0048;AVGPOST=0.9996;RSQ=0.9631;ERATE=0.0004;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16575541 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16575654 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0013;AVGPOST=0.9994;RSQ=0.8054;ERATE=0.0003;THETA=0.0020;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16575712 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0056;AVGPOST=0.9992;RSQ=0.9409;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 16575726 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.736;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8247;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16575791 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0270;AVGPOST=0.9998;RSQ=0.9969;ERATE=0.0003;THETA=0.0007;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 16575917 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0039;AVGPOST=0.9992;RSQ=0.9160;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16575950 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0052;AVGPOST=0.9997;RSQ=0.9707;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16576147 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4710;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16576398 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9333;ERATE=0.0004;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16576437 rs35640425 ACAAT A 8325 PASS INDEL;BAVGPOST=0.994;BRSQ=0.934;LDAF=0.0499;AVGPOST=0.9976;RSQ=0.9830;ERATE=0.0005;THETA=0.0005;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 16576505 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0308;AVGPOST=0.9984;RSQ=0.9825;ERATE=0.0004;THETA=0.0002;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 16576566 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5817;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16576653 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.5350;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16576693 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0049;AVGPOST=0.9994;RSQ=0.9438;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16576739 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7309;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16576836 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2981;AVGPOST=0.9983;RSQ=0.9971;ERATE=0.0006;THETA=0.0003;AC=651;AN=2184 GT:DS:GL:BD 0.29807693 0
1 16577106 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0146;AVGPOST=0.9999;RSQ=0.9963;ERATE=0.0003;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 16577192 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16577336 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16577377 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16577405 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16577510 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16577794 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0389;AVGPOST=0.9999;RSQ=0.9989;ERATE=0.0003;THETA=0.0003;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 16577805 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16577908 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2984;AVGPOST=1.0000;RSQ=0.9999;ERATE=0.0003;THETA=0.0003;AC=652;AN=2184 GT:DS:GL:BD 0.29853481 0
1 16577948 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0302;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 16578017 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9858;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16578115 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16578134 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0169;AVGPOST=1.0000;RSQ=0.9988;ERATE=0.0003;THETA=0.0008;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 16578151 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16578197 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16578456 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16578608 . G GT 19 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9980;RSQ=0.6522;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16578688 . AT A 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5040;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16578828 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16578950 . AAC A 78 PASS INDEL;BAVGPOST=0.994;BRSQ=0.707;LDAF=0.0214;AVGPOST=0.9786;RSQ=0.5793;ERATE=0.0089;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 16579070 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2763;AVGPOST=0.9995;RSQ=0.9991;ERATE=0.0003;THETA=0.0005;AC=604;AN=2184 GT:DS:GL:BD 0.27655679 0
1 16579099 . GC G 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0017;AVGPOST=0.9971;RSQ=0.2896;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16579129 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16579155 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0029;AVGPOST=0.9990;RSQ=0.8974;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16579173 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8621;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16579440 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16579470 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16579506 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16579536 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16579688 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 16579721 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 16579873 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0270;AVGPOST=0.9999;RSQ=0.9978;ERATE=0.0003;THETA=0.0006;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 16579883 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0215;AVGPOST=1.0000;RSQ=0.9990;ERATE=0.0003;THETA=0.0018;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 16580003 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16580034 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16580073 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0008;AVGPOST=0.9998;RSQ=0.8927;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16580088 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16580136 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16580633 . A AC 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5281;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16580693 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0276;AVGPOST=0.9989;RSQ=0.9873;ERATE=0.0003;THETA=0.0005;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 16580724 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7891;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16580762 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7430;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16580791 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0273;AVGPOST=0.9994;RSQ=0.9915;ERATE=0.0003;THETA=0.0006;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 16581031 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6380;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16581209 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9726;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16581220 . CA C 40 PASS INDEL;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6468;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16581260 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16581325 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0094;AVGPOST=0.9994;RSQ=0.9714;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 16581399 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0028;AVGPOST=0.9996;RSQ=0.9392;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16581580 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0051;AVGPOST=0.9990;RSQ=0.9314;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16581749 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0501;AVGPOST=0.9994;RSQ=0.9954;ERATE=0.0003;THETA=0.0008;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 16581955 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2977;AVGPOST=0.9952;RSQ=0.9915;ERATE=0.0014;THETA=0.0008;AC=649;AN=2184 GT:DS:GL:BD 0.29716116 0
1 16581991 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0049;AVGPOST=0.9985;RSQ=0.8722;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16582053 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0850;AVGPOST=0.9995;RSQ=0.9975;ERATE=0.0003;THETA=0.0006;AC=186;AN=2184 GT:DS:GL:BD 0.08516484 0
1 16582082 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16582087 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0042;AVGPOST=0.9996;RSQ=0.9545;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16582188 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16582293 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16582351 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16582360 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16582477 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9734;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16582565 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0303;AVGPOST=0.9997;RSQ=0.9962;ERATE=0.0003;THETA=0.0006;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 16582686 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.7655;AVGPOST=0.9974;RSQ=0.9939;ERATE=0.0004;THETA=0.0004;AC=1670;AN=2184 GT:DS:GL:BD 0.76465201 1
1 16582817 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8258;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16582949 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9181;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16582975 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0279;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 16583080 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0041;AVGPOST=1.0000;RSQ=0.9946;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16583277 . T TG 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5883;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16583478 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2195;AVGPOST=0.9985;RSQ=0.9967;ERATE=0.0006;THETA=0.0005;AC=480;AN=2184 GT:DS:GL:BD 0.21978022 0
1 16583517 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16583568 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0151;AVGPOST=0.9990;RSQ=0.9733;ERATE=0.0003;THETA=0.0007;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 16583742 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.0058;AVGPOST=0.9994;RSQ=0.9498;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 16583774 . GA G 120 PASS INDEL;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0020;AVGPOST=0.9991;RSQ=0.8311;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16583981 . G GA 5311 PASS INDEL;BAVGPOST=0.996;BRSQ=0.950;LDAF=0.0371;AVGPOST=0.9912;RSQ=0.9188;ERATE=0.0017;THETA=0.0007;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 16583983 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0102;AVGPOST=0.9987;RSQ=0.9521;ERATE=0.0003;THETA=0.0008;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 16584005 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.937;LDAF=0.0162;AVGPOST=0.9985;RSQ=0.9590;ERATE=0.0003;THETA=0.0006;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 16584188 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.980;LDAF=0.2956;AVGPOST=0.9958;RSQ=0.9928;ERATE=0.0007;THETA=0.0003;AC=647;AN=2184 GT:DS:GL:BD 0.29624543 0
1 16584192 . TG T 46 PASS INDEL;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5838;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16584469 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0027;AVGPOST=0.9989;RSQ=0.8627;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16584483 . CT C 32 PASS INDEL;BAVGPOST=0.991;BRSQ=0.413;LDAF=0.0170;AVGPOST=0.9761;RSQ=0.4781;ERATE=0.0038;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 16584493 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.796;LDAF=0.0143;AVGPOST=0.9899;RSQ=0.7210;ERATE=0.0033;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 16584494 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.926;LDAF=0.0715;AVGPOST=0.9803;RSQ=0.8869;ERATE=0.0074;THETA=0.0005;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 16584499 . C CT 3138 PASS INDEL;BAVGPOST=0.975;BRSQ=0.759;LDAF=0.0696;AVGPOST=0.9472;RSQ=0.6735;ERATE=0.0215;THETA=0.0004;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 16584591 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16584694 . CACTT C 2254 PASS INDEL;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0114;AVGPOST=0.9985;RSQ=0.9447;ERATE=0.0004;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 16584770 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.816;LDAF=0.0013;AVGPOST=0.9997;RSQ=0.9118;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16584803 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7459;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16585003 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8440;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16585006 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0511;AVGPOST=0.9989;RSQ=0.9913;ERATE=0.0005;THETA=0.0008;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 16585008 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7423;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16585112 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0028;AVGPOST=0.9973;RSQ=0.6497;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16585128 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.801;LDAF=0.0034;AVGPOST=0.9978;RSQ=0.7858;ERATE=0.0007;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16585248 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16585294 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0234;AVGPOST=0.9958;RSQ=0.9401;ERATE=0.0005;THETA=0.0004;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 16585295 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.766;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4315;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16585472 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7045;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16585684 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6495;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16585818 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.2199;AVGPOST=0.9987;RSQ=0.9965;ERATE=0.0005;THETA=0.0005;AC=480;AN=2184 GT:DS:GL:BD 0.21978022 0
1 16585830 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16585883 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16585898 . TCTAGA T 228 PASS INDEL;BAVGPOST=0.999;BRSQ=0.773;LDAF=0.0025;AVGPOST=0.9977;RSQ=0.6482;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16585949 . TA T 214 PASS INDEL;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0025;AVGPOST=0.9993;RSQ=0.8812;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16585993 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2196;AVGPOST=0.9981;RSQ=0.9950;ERATE=0.0005;THETA=0.0004;AC=479;AN=2184 GT:DS:GL:BD 0.21932234 0
1 16586006 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5120;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16586033 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0857;AVGPOST=0.9984;RSQ=0.9912;ERATE=0.0004;THETA=0.0004;AC=186;AN=2184 GT:DS:GL:BD 0.08516484 0
1 16586039 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0034;AVGPOST=0.9997;RSQ=0.9545;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16586148 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.569;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4274;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16586159 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0501;AVGPOST=0.9982;RSQ=0.9846;ERATE=0.0005;THETA=0.0003;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 16586161 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.764;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6406;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16586180 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9993;RSQ=0.9064;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16586428 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.952;LDAF=0.0269;AVGPOST=0.9995;RSQ=0.9917;ERATE=0.0003;THETA=0.0006;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 16586488 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.624;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5654;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16586515 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9370;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16586695 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0162;AVGPOST=0.9965;RSQ=0.9225;ERATE=0.0004;THETA=0.0006;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 16586770 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.3866;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16586860 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4603;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16586884 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.760;LDAF=0.0029;AVGPOST=0.9959;RSQ=0.4327;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16587000 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.734;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8082;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16587128 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0026;AVGPOST=0.9984;RSQ=0.7487;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16587264 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6151;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16587435 . GTGA G 568 PASS INDEL;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0047;AVGPOST=0.9988;RSQ=0.9013;ERATE=0.0004;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16587470 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16587579 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0123;AVGPOST=0.9992;RSQ=0.9798;ERATE=0.0003;THETA=0.0008;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 16587727 . TG T 841 PASS INDEL;BAVGPOST=0.999;BRSQ=0.899;LDAF=0.0089;AVGPOST=0.9979;RSQ=0.9117;ERATE=0.0003;THETA=0.0013;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 16587851 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5345;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16587921 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.685;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.6093;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16588063 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0065;AVGPOST=0.9997;RSQ=0.9798;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 16588106 . TTACCA T 1686 PASS INDEL;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0070;AVGPOST=0.9987;RSQ=0.9168;ERATE=0.0005;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 16588133 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16588138 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5491;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16588146 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9998;RSQ=0.9873;ERATE=0.0003;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16588178 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6087;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16588180 . CA C 42 PASS INDEL;BAVGPOST=1.000;BRSQ=0.767;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6005;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16588211 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.575;LDAF=0.0026;AVGPOST=0.9967;RSQ=0.5083;ERATE=0.0006;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16588240 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.2981;AVGPOST=0.9962;RSQ=0.9928;ERATE=0.0005;THETA=0.0006;AC=651;AN=2184 GT:DS:GL:BD 0.29807693 0
1 16588323 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.984;LDAF=0.2939;AVGPOST=0.9936;RSQ=0.9878;ERATE=0.0010;THETA=0.0006;AC=641;AN=2184 GT:DS:GL:BD 0.29349816 0
1 16588336 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0039;AVGPOST=0.9987;RSQ=0.8369;ERATE=0.0006;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16588342 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.666;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.6055;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16588366 . A AT 2451 PASS INDEL;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0327;AVGPOST=0.9970;RSQ=0.9673;ERATE=0.0005;THETA=0.0010;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 16588384 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.3659;ERATE=0.0006;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16588495 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.765;LDAF=0.0022;AVGPOST=0.9989;RSQ=0.7893;ERATE=0.0005;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16588532 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9535;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16588746 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0213;AVGPOST=0.9992;RSQ=0.9855;ERATE=0.0003;THETA=0.0009;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 16588851 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.658;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.4635;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16588863 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0001;AVGPOST=0.9999;RSQ=0.0499;ERATE=0.0003;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 16588870 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6952;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16588930 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16589100 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.512;LDAF=0.0045;AVGPOST=0.9925;RSQ=0.3128;ERATE=0.0007;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16589140 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.711;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6343;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16589173 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8635;ERATE=0.0006;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16589174 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0045;AVGPOST=0.9973;RSQ=0.7778;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16589178 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5729;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16589240 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.4774;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16589267 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6196;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16589289 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0307;AVGPOST=0.9988;RSQ=0.9839;ERATE=0.0006;THETA=0.0004;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 16589352 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.599;LDAF=0.0057;AVGPOST=0.9951;RSQ=0.6618;ERATE=0.0005;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16589362 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0061;AVGPOST=0.9986;RSQ=0.8990;ERATE=0.0003;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 16589366 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0022;AVGPOST=0.9974;RSQ=0.4828;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16589378 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.630;LDAF=0.0015;AVGPOST=0.9993;RSQ=0.7912;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16589452 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0055;AVGPOST=0.9972;RSQ=0.7897;ERATE=0.0006;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16589629 . A AT 504 PASS INDEL;BAVGPOST=0.992;BRSQ=0.704;LDAF=0.0216;AVGPOST=0.9763;RSQ=0.5644;ERATE=0.0051;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 16589677 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0269;AVGPOST=0.9991;RSQ=0.9857;ERATE=0.0003;THETA=0.0004;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 16589753 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.891;LDAF=0.0272;AVGPOST=0.9965;RSQ=0.9515;ERATE=0.0005;THETA=0.0005;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 16589882 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7755;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16589952 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.903;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8493;ERATE=0.0005;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16589979 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0286;AVGPOST=0.9952;RSQ=0.9350;ERATE=0.0007;THETA=0.0003;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 16590134 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.624;LDAF=0.0043;AVGPOST=0.9961;RSQ=0.6606;ERATE=0.0006;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16590225 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0028;AVGPOST=0.9980;RSQ=0.7156;ERATE=0.0005;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16590230 . C CA 24845 PASS INDEL;BAVGPOST=0.959;BRSQ=0.934;LDAF=0.4175;AVGPOST=0.9216;RSQ=0.8933;ERATE=0.0179;THETA=0.0004;AC=903;AN=2184 GT:DS:GL:BD 0.41346154 0
1 16590239 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.907;LDAF=0.0653;AVGPOST=0.9819;RSQ=0.8874;ERATE=0.0061;THETA=0.0009;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 16590255 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.775;LDAF=0.0032;AVGPOST=0.9968;RSQ=0.5471;ERATE=0.0007;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16590377 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.793;LDAF=0.0102;AVGPOST=0.9969;RSQ=0.8753;ERATE=0.0005;THETA=0.0007;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 16590380 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.478;LDAF=0.0039;AVGPOST=0.9934;RSQ=0.3573;ERATE=0.0009;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16590409 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.594;LDAF=0.0105;AVGPOST=0.9913;RSQ=0.6850;ERATE=0.0012;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 16590482 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.771;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4928;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16590507 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.634;LDAF=0.0025;AVGPOST=0.9962;RSQ=0.4242;ERATE=0.0006;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16590692 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9799;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16590727 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8667;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16590822 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6437;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16591044 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0504;AVGPOST=0.9996;RSQ=0.9971;ERATE=0.0003;THETA=0.0006;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 16591058 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.8975;ERATE=0.0005;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16591072 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.1682;AVGPOST=0.9994;RSQ=0.9981;ERATE=0.0004;THETA=0.0003;AC=368;AN=2184 GT:DS:GL:BD 0.16849817 0
1 16591122 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9872;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16591180 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0084;AVGPOST=0.9996;RSQ=0.9766;ERATE=0.0004;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 16591193 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0117;AVGPOST=0.9993;RSQ=0.9732;ERATE=0.0003;THETA=0.0007;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 16591350 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0079;AVGPOST=0.9998;RSQ=0.9863;ERATE=0.0003;THETA=0.0010;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 16591376 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.775;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8889;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16591392 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0022;AVGPOST=0.9997;RSQ=0.9447;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16591414 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16591508 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8316;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16591665 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0204;AVGPOST=0.9994;RSQ=0.9858;ERATE=0.0003;THETA=0.0005;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 16591835 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9429;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16592009 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5305;ERATE=0.0005;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16592100 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.693;LDAF=0.0031;AVGPOST=0.9989;RSQ=0.8491;ERATE=0.0003;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16592194 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16592197 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0088;AVGPOST=0.9999;RSQ=0.9932;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 16592236 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0128;AVGPOST=0.9990;RSQ=0.9723;ERATE=0.0004;THETA=0.0009;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 16592255 . A AG 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7379;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16592506 . C CT 4872 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0319;AVGPOST=0.9971;RSQ=0.9675;ERATE=0.0005;THETA=0.0008;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 16592637 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.747;LDAF=0.0019;AVGPOST=0.9985;RSQ=0.6510;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16592675 . G GT 332 PASS INDEL;BAVGPOST=0.982;BRSQ=0.433;LDAF=0.0232;AVGPOST=0.9781;RSQ=0.6218;ERATE=0.0026;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 16592683 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.956;LDAF=0.2906;AVGPOST=0.9847;RSQ=0.9732;ERATE=0.0017;THETA=0.0007;AC=634;AN=2184 GT:DS:GL:BD 0.29029304 0
1 16592684 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.754;LDAF=0.0073;AVGPOST=0.9954;RSQ=0.7369;ERATE=0.0008;THETA=0.0011;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16592825 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0279;AVGPOST=0.9997;RSQ=0.9949;ERATE=0.0004;THETA=0.0014;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 16592840 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5207;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16592862 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0202;AVGPOST=0.9997;RSQ=0.9936;ERATE=0.0003;THETA=0.0005;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 16592882 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.676;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6844;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16592886 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0046;AVGPOST=0.9998;RSQ=0.9764;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16592956 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0050;AVGPOST=0.9990;RSQ=0.9260;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16593253 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0013;AVGPOST=0.9999;RSQ=0.9551;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16593338 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2202;AVGPOST=0.9988;RSQ=0.9970;ERATE=0.0006;THETA=0.0002;AC=480;AN=2184 GT:DS:GL:BD 0.21978022 0
1 16593371 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0301;AVGPOST=0.9997;RSQ=0.9962;ERATE=0.0003;THETA=0.0004;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 16593404 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3939;AVGPOST=0.9963;RSQ=0.9950;ERATE=0.0007;THETA=0.0004;AC=859;AN=2184 GT:DS:GL:BD 0.39331502 0
1 16593450 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7515;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16593462 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7651;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16593779 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5045;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16593804 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2195;AVGPOST=0.9989;RSQ=0.9970;ERATE=0.0005;THETA=0.0003;AC=479;AN=2184 GT:DS:GL:BD 0.21932234 0
1 16593850 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0071;AVGPOST=0.9995;RSQ=0.9650;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16593928 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2989;AVGPOST=0.9971;RSQ=0.9950;ERATE=0.0005;THETA=0.0005;AC=651;AN=2184 GT:DS:GL:BD 0.29807693 0
1 16593957 rs112556277 AC A 3830 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0208;AVGPOST=0.9989;RSQ=0.9812;ERATE=0.0004;THETA=0.0006;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 16594034 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2184;AVGPOST=0.9991;RSQ=0.9976;ERATE=0.0004;THETA=0.0022;AC=477;AN=2184 GT:DS:GL:BD 0.21840659 0
1 16594055 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.2982;AVGPOST=0.9967;RSQ=0.9937;ERATE=0.0007;THETA=0.0003;AC=650;AN=2184 GT:DS:GL:BD 0.29761904 0
1 16594235 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0013;AVGPOST=0.9997;RSQ=0.8970;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16594249 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5730;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16594331 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0053;AVGPOST=0.9985;RSQ=0.9038;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16594462 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4916;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16594727 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0038;AVGPOST=0.9988;RSQ=0.8992;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16594730 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0066;AVGPOST=0.9995;RSQ=0.9701;ERATE=0.0003;THETA=0.0024;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 16594745 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.7253;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16594790 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7787;AVGPOST=0.9981;RSQ=0.9950;ERATE=0.0005;THETA=0.0007;AC=1701;AN=2184 GT:DS:GL:BD 0.77884614 1
1 16594810 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2912;AVGPOST=0.9973;RSQ=0.9951;ERATE=0.0004;THETA=0.0005;AC=637;AN=2184 GT:DS:GL:BD 0.29166666 0
1 16595198 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7032;ERATE=0.0003;THETA=0.0026;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16595361 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.572;LDAF=0.0156;AVGPOST=0.9862;RSQ=0.6402;ERATE=0.0008;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 16595377 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0123;AVGPOST=0.9898;RSQ=0.6860;ERATE=0.0007;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 16595623 . AGTCTCT A 1595 PASS INDEL;BAVGPOST=0.988;BRSQ=0.793;LDAF=0.0332;AVGPOST=0.9900;RSQ=0.8900;ERATE=0.0010;THETA=0.0006;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 16595758 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0306;AVGPOST=0.9991;RSQ=0.9886;ERATE=0.0004;THETA=0.0003;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 16595895 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.696;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.5905;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16595981 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0004;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16596050 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0066;AVGPOST=0.9996;RSQ=0.9742;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 16596275 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0026;AVGPOST=0.9976;RSQ=0.6304;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16596331 . TTTTC T 8817 PASS INDEL;BAVGPOST=0.991;BRSQ=0.910;LDAF=0.0499;AVGPOST=0.9981;RSQ=0.9844;ERATE=0.0004;THETA=0.0006;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 16596346 rs113133245 CTGTTT C 25260 PASS INDEL;BAVGPOST=0.962;BRSQ=0.922;LDAF=0.2959;AVGPOST=0.9818;RSQ=0.9665;ERATE=0.0022;THETA=0.0005;AC=650;AN=2184 GT:DS:GL:BD 0.29761904 0
1 16596436 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16596437 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0501;AVGPOST=0.9978;RSQ=0.9822;ERATE=0.0005;THETA=0.0006;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 16596441 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.732;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6838;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16596542 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.989;LDAF=0.3777;AVGPOST=0.9930;RSQ=0.9906;ERATE=0.0005;THETA=0.0005;AC=823;AN=2184 GT:DS:GL:BD 0.37683150 0
1 16596558 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.7655;AVGPOST=0.9960;RSQ=0.9917;ERATE=0.0004;THETA=0.0004;AC=1671;AN=2184 GT:DS:GL:BD 0.76510990 1
1 16596651 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0027;AVGPOST=0.9982;RSQ=0.7453;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16596721 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.2194;AVGPOST=0.9987;RSQ=0.9970;ERATE=0.0003;THETA=0.0004;AC=479;AN=2184 GT:DS:GL:BD 0.21932234 0
1 16596734 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0522;AVGPOST=0.9997;RSQ=0.9974;ERATE=0.0004;THETA=0.0006;AC=114;AN=2184 GT:DS:GL:BD 0.05219780 0
1 16596843 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0077;AVGPOST=0.9993;RSQ=0.9597;ERATE=0.0004;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 16596849 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9625;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16596900 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5943;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16596929 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2939;AVGPOST=0.9977;RSQ=0.9955;ERATE=0.0007;THETA=0.0003;AC=641;AN=2184 GT:DS:GL:BD 0.29349816 0
1 16596998 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0218;AVGPOST=0.9988;RSQ=0.9769;ERATE=0.0005;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 16597046 . AG A 16 PASS INDEL;BAVGPOST=0.999;BRSQ=0.703;LDAF=0.0016;AVGPOST=0.9980;RSQ=0.5137;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16597071 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0077;AVGPOST=0.9993;RSQ=0.9579;ERATE=0.0005;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 16597098 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0503;AVGPOST=0.9986;RSQ=0.9882;ERATE=0.0005;THETA=0.0003;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 16597103 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9905;ERATE=0.0003;THETA=0.0019;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 16597186 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.694;LDAF=0.0200;AVGPOST=0.9856;RSQ=0.7266;ERATE=0.0015;THETA=0.0006;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 16597186 . A AG 327 PASS INDEL;BAVGPOST=0.991;BRSQ=0.754;LDAF=0.0168;AVGPOST=0.9880;RSQ=0.7217;ERATE=0.0007;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 16597203 rs76347499 A AAAG 88602 PASS INDEL;BAVGPOST=0.986;BRSQ=0.522;LDAF=0.9731;AVGPOST=0.9693;RSQ=0.5384;ERATE=0.0059;THETA=0.0010;AC=2145;AN=2184 GT:DS:GL:BD 0.98214287 1
1 16597241 . TGA T 299 PASS INDEL;BAVGPOST=0.997;BRSQ=0.836;LDAF=0.0111;AVGPOST=0.9946;RSQ=0.7943;ERATE=0.0017;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 16597247 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.910;LDAF=0.0282;AVGPOST=0.9969;RSQ=0.9600;ERATE=0.0004;THETA=0.0009;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 16597439 rs35955324 G GA 255 PASS INDEL;BAVGPOST=0.967;BRSQ=0.562;LDAF=0.0632;AVGPOST=0.9257;RSQ=0.5023;ERATE=0.0229;THETA=0.0010;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 16597520 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16597663 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7311;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16598065 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.774;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7423;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16598112 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0221;AVGPOST=0.9998;RSQ=0.9951;ERATE=0.0003;THETA=0.0004;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 16598285 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2196;AVGPOST=0.9992;RSQ=0.9980;ERATE=0.0004;THETA=0.0005;AC=479;AN=2184 GT:DS:GL:BD 0.21932234 0
1 16598319 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5910;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16598431 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.867;LDAF=0.0227;AVGPOST=0.9970;RSQ=0.9401;ERATE=0.0006;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 16598517 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.2200;AVGPOST=0.9984;RSQ=0.9959;ERATE=0.0003;THETA=0.0002;AC=479;AN=2184 GT:DS:GL:BD 0.21932234 0
1 16598533 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.592;LDAF=0.0019;AVGPOST=0.9983;RSQ=0.6486;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16598566 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.716;LDAF=0.0096;AVGPOST=0.9924;RSQ=0.7445;ERATE=0.0006;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 16598788 . CTT C 202 PASS INDEL;BAVGPOST=1.000;BRSQ=0.677;LDAF=0.0042;AVGPOST=0.9976;RSQ=0.7773;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16598857 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.494;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5110;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16598911 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.965;LDAF=0.2242;AVGPOST=0.9689;RSQ=0.9309;ERATE=0.0061;THETA=0.0007;AC=481;AN=2184 GT:DS:GL:BD 0.22023809 0
1 16598944 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.661;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.5914;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16598971 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.623;LDAF=0.0206;AVGPOST=0.9857;RSQ=0.7328;ERATE=0.0022;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 16599003 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.694;LDAF=0.0035;AVGPOST=0.9966;RSQ=0.6176;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16599005 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.557;LDAF=0.0024;AVGPOST=0.9966;RSQ=0.4110;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16599036 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.701;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4841;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16599049 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5611;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16599223 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9865;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16599411 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6529;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16599470 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0076;AVGPOST=0.9994;RSQ=0.9618;ERATE=0.0003;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 16599490 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2951;AVGPOST=0.9977;RSQ=0.9962;ERATE=0.0004;THETA=0.0004;AC=643;AN=2184 GT:DS:GL:BD 0.29441392 0
1 16599802 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6717;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16599938 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9553;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16600027 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7608;ERATE=0.0003;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16600176 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5910;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16600231 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0120;AVGPOST=0.9996;RSQ=0.9864;ERATE=0.0003;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 16600265 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6010;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16600477 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.2932;AVGPOST=0.9995;RSQ=0.9989;ERATE=0.0003;THETA=0.0005;AC=640;AN=2184 GT:DS:GL:BD 0.29304031 0
1 16600494 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16600534 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0303;AVGPOST=0.9995;RSQ=0.9933;ERATE=0.0003;THETA=0.0006;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 16600535 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8090;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16600639 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6112;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16600640 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5362;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16600681 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.986;LDAF=0.2896;AVGPOST=0.9960;RSQ=0.9934;ERATE=0.0006;THETA=0.0005;AC=634;AN=2184 GT:DS:GL:BD 0.29029304 0
1 16600817 . AAAAAG A 200 PASS INDEL;BAVGPOST=1.000;BRSQ=0.742;LDAF=0.0010;AVGPOST=0.9986;RSQ=0.3534;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16600845 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.4978;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16600877 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2194;AVGPOST=0.9996;RSQ=0.9989;ERATE=0.0003;THETA=0.0002;AC=479;AN=2184 GT:DS:GL:BD 0.21932234 0
1 16601114 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.744;LDAF=0.0026;AVGPOST=0.9984;RSQ=0.7272;ERATE=0.0005;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16601172 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.943;LDAF=0.0539;AVGPOST=0.9936;RSQ=0.9525;ERATE=0.0008;THETA=0.0006;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 16601209 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0116;AVGPOST=0.9996;RSQ=0.9845;ERATE=0.0003;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 16601210 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4242;ERATE=0.0006;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16601251 . T TA 258 PASS INDEL;BAVGPOST=0.889;BRSQ=0.633;LDAF=0.1447;AVGPOST=0.9268;RSQ=0.7976;ERATE=0.0038;THETA=0.0004;AC=303;AN=2184 GT:DS:GL:BD 0.13873626 0
1 16601320 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0501;AVGPOST=0.9995;RSQ=0.9958;ERATE=0.0003;THETA=0.0004;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 16601386 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6941;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16601420 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2195;AVGPOST=0.9995;RSQ=0.9985;ERATE=0.0003;THETA=0.0006;AC=479;AN=2184 GT:DS:GL:BD 0.21932234 0
1 16601432 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0216;AVGPOST=0.9998;RSQ=0.9960;ERATE=0.0003;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 16601561 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0054;AVGPOST=0.9984;RSQ=0.8800;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16601621 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2930;AVGPOST=0.9990;RSQ=0.9979;ERATE=0.0005;THETA=0.0003;AC=640;AN=2184 GT:DS:GL:BD 0.29304031 0
1 16601635 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6598;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16601684 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0055;AVGPOST=0.9991;RSQ=0.9348;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 16601970 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2930;AVGPOST=0.9988;RSQ=0.9975;ERATE=0.0004;THETA=0.0005;AC=640;AN=2184 GT:DS:GL:BD 0.29304031 0
1 16602106 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9998;RSQ=0.9900;ERATE=0.0003;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 16602165 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0013;AVGPOST=0.9998;RSQ=0.9244;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16602174 . CT C 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8161;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16602431 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0146;AVGPOST=0.9995;RSQ=0.9848;ERATE=0.0003;THETA=0.0006;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 16602450 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.2933;AVGPOST=0.9916;RSQ=0.9863;ERATE=0.0010;THETA=0.0003;AC=638;AN=2184 GT:DS:GL:BD 0.29212454 0
1 16602452 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0104;AVGPOST=0.9962;RSQ=0.8372;ERATE=0.0006;THETA=0.0012;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 16602488 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0302;AVGPOST=0.9998;RSQ=0.9968;ERATE=0.0003;THETA=0.0006;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 16602519 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.9073;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16602602 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2929;AVGPOST=0.9982;RSQ=0.9969;ERATE=0.0003;THETA=0.0003;AC=640;AN=2184 GT:DS:GL:BD 0.29304031 0
1 16602744 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.664;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4527;ERATE=0.0007;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16602926 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9858;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16602933 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2194;AVGPOST=0.9985;RSQ=0.9961;ERATE=0.0006;THETA=0.0006;AC=479;AN=2184 GT:DS:GL:BD 0.21932234 0
1 16603009 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5589;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16603065 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=0.9999;RSQ=0.0499;ERATE=0.0003;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 16603103 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0024;AVGPOST=0.9978;RSQ=0.6249;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16603109 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0039;AVGPOST=0.9991;RSQ=0.9092;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16603140 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5149;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16603144 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1683;AVGPOST=0.9987;RSQ=0.9961;ERATE=0.0004;THETA=0.0005;AC=368;AN=2184 GT:DS:GL:BD 0.16849817 0
1 16603429 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.809;LDAF=0.0047;AVGPOST=0.9979;RSQ=0.8174;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16603441 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0041;AVGPOST=0.9982;RSQ=0.8250;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16603634 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16603636 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.989;LDAF=0.7879;AVGPOST=0.9919;RSQ=0.9804;ERATE=0.0005;THETA=0.0005;AC=1718;AN=2184 GT:DS:GL:BD 0.78663003 1
1 16603681 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.738;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8656;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16603699 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.7111;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16603711 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0227;AVGPOST=0.9992;RSQ=0.9849;ERATE=0.0004;THETA=0.0006;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 16603903 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.691;LDAF=0.0029;AVGPOST=0.9967;RSQ=0.5521;ERATE=0.0006;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16603953 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.692;LDAF=0.0023;AVGPOST=0.9987;RSQ=0.7439;ERATE=0.0004;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16604037 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.755;LDAF=0.0040;AVGPOST=0.9980;RSQ=0.8098;ERATE=0.0005;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16604077 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.643;LDAF=0.0028;AVGPOST=0.9959;RSQ=0.4068;ERATE=0.0007;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16604152 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.687;LDAF=0.0024;AVGPOST=0.9974;RSQ=0.5623;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16604290 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.978;LDAF=0.1633;AVGPOST=0.9975;RSQ=0.9930;ERATE=0.0003;THETA=0.0005;AC=356;AN=2184 GT:DS:GL:BD 0.16300367 0
1 16604315 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.727;LDAF=0.0040;AVGPOST=0.9976;RSQ=0.7891;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16604409 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5669;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16604416 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.932;LDAF=0.0505;AVGPOST=0.9980;RSQ=0.9825;ERATE=0.0006;THETA=0.0004;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 16604528 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.834;LDAF=0.0037;AVGPOST=0.9987;RSQ=0.8483;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16604539 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.738;LDAF=0.0023;AVGPOST=0.9987;RSQ=0.7407;ERATE=0.0006;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16604623 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.426;LDAF=0.0070;AVGPOST=0.9918;RSQ=0.5393;ERATE=0.0014;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16604744 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.680;LDAF=0.0020;AVGPOST=0.9978;RSQ=0.4929;ERATE=0.0008;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16604800 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.694;LDAF=0.0033;AVGPOST=0.9961;RSQ=0.4713;ERATE=0.0005;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16604811 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0075;AVGPOST=0.9974;RSQ=0.8579;ERATE=0.0005;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 16604904 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16604913 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6615;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16604972 . T TTA 394 PASS INDEL;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5316;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16605015 . ACT A 2161 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0151;AVGPOST=0.9990;RSQ=0.9725;ERATE=0.0003;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 16605143 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.677;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7383;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16605169 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0221;AVGPOST=0.9997;RSQ=0.9941;ERATE=0.0003;THETA=0.0005;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 16605251 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0047;AVGPOST=0.9996;RSQ=0.9588;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16605265 . T TAGA 155 PASS INDEL;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16605274 . C CT 89 PASS INDEL;BAVGPOST=0.985;BRSQ=0.532;LDAF=0.0298;AVGPOST=0.9610;RSQ=0.4706;ERATE=0.0098;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 16605337 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0044;AVGPOST=0.9984;RSQ=0.8325;ERATE=0.0005;THETA=0.0013;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16605564 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0207;AVGPOST=0.9993;RSQ=0.9836;ERATE=0.0004;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 16605603 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0074;AVGPOST=0.9989;RSQ=0.9365;ERATE=0.0004;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 16605605 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9256;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16605605 . C CG 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.7147;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16605786 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0071;AVGPOST=0.9995;RSQ=0.9696;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16605809 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0307;AVGPOST=0.9999;RSQ=0.9987;ERATE=0.0003;THETA=0.0009;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 16605841 rs113377225 CTTGAG C 5119 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0222;AVGPOST=0.9995;RSQ=0.9906;ERATE=0.0003;THETA=0.0008;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 16605918 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.983;LDAF=0.0427;AVGPOST=0.9986;RSQ=0.9853;ERATE=0.0003;THETA=0.0006;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 16605969 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0016;AVGPOST=0.9988;RSQ=0.7451;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16606189 . AAG A 1781 PASS INDEL;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0157;AVGPOST=0.9974;RSQ=0.9335;ERATE=0.0006;THETA=0.0006;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 16606327 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2177;AVGPOST=0.9973;RSQ=0.9934;ERATE=0.0005;THETA=0.0004;AC=476;AN=2184 GT:DS:GL:BD 0.21794872 0
1 16606353 . T TC 378 PASS INDEL;BAVGPOST=0.841;BRSQ=0.242;LDAF=0.1198;AVGPOST=0.8471;RSQ=0.4260;ERATE=0.0122;THETA=0.0012;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 16606354 . T TC 584 PASS INDEL;BAVGPOST=0.992;BRSQ=0.845;LDAF=0.0364;AVGPOST=0.9859;RSQ=0.8456;ERATE=0.0011;THETA=0.0005;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 16606356 . T TC 188 PASS INDEL;BAVGPOST=0.992;BRSQ=0.854;LDAF=0.0210;AVGPOST=0.9965;RSQ=0.9269;ERATE=0.0007;THETA=0.0005;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 16606730 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0216;AVGPOST=0.9998;RSQ=0.9960;ERATE=0.0003;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 16606747 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7689;ERATE=0.0008;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16606975 . CA C 134 PASS INDEL;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16606987 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0309;AVGPOST=0.9994;RSQ=0.9921;ERATE=0.0003;THETA=0.0007;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 16607139 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0043;AVGPOST=0.9984;RSQ=0.8848;ERATE=0.0003;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16607173 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.7144;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16607226 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.825;LDAF=0.0075;AVGPOST=0.9977;RSQ=0.8830;ERATE=0.0003;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16607271 . G GA 158 PASS INDEL;BAVGPOST=0.975;BRSQ=0.573;LDAF=0.0500;AVGPOST=0.9410;RSQ=0.4988;ERATE=0.0160;THETA=0.0006;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 16607344 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16607388 . T TA 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5529;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16607583 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.562;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5667;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16607743 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0308;AVGPOST=0.9986;RSQ=0.9816;ERATE=0.0005;THETA=0.0025;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 16607765 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5055;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16607812 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16607865 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7941;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16607871 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2931;AVGPOST=0.9992;RSQ=0.9985;ERATE=0.0003;THETA=0.0004;AC=641;AN=2184 GT:DS:GL:BD 0.29349816 0
1 16607968 . T TG 11192 PASS INDEL;BAVGPOST=0.975;BRSQ=0.946;LDAF=0.2836;AVGPOST=0.9609;RSQ=0.9284;ERATE=0.0079;THETA=0.0007;AC=618;AN=2184 GT:DS:GL:BD 0.28296703 0
1 16607969 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.937;LDAF=0.2645;AVGPOST=0.9668;RSQ=0.9309;ERATE=0.0077;THETA=0.0005;AC=581;AN=2184 GT:DS:GL:BD 0.26602563 0
1 16608021 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5492;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16608027 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5924;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16608088 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.833;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7478;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16608130 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.523;LDAF=0.0117;AVGPOST=0.9858;RSQ=0.5149;ERATE=0.0048;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 16608159 . C CT 576 PASS INDEL;BAVGPOST=0.932;BRSQ=0.467;LDAF=0.1164;AVGPOST=0.8603;RSQ=0.4254;ERATE=0.0288;THETA=0.0012;AC=138;AN=2184 GT:DS:GL:BD 0.06318682 0
1 16608245 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.930;LDAF=0.0084;AVGPOST=0.9970;RSQ=0.8389;ERATE=0.0005;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16608456 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.481;LDAF=0.0093;AVGPOST=0.9888;RSQ=0.5498;ERATE=0.0023;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 16608615 . CTG C 1014 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0050;AVGPOST=0.9992;RSQ=0.9217;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16608626 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8247;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16608643 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8054;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16608710 . ATTTTCTTTTTTTTTT A 4849 PASS INDEL;BAVGPOST=0.995;BRSQ=0.936;LDAF=0.0314;AVGPOST=0.9979;RSQ=0.9738;ERATE=0.0004;THETA=0.0006;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 16608757 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.504;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7094;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16608775 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.454;LDAF=0.0044;AVGPOST=0.9967;RSQ=0.7252;ERATE=0.0004;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16608789 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.741;LDAF=0.0038;AVGPOST=0.9973;RSQ=0.6821;ERATE=0.0008;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16608872 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0517;AVGPOST=0.9973;RSQ=0.9776;ERATE=0.0005;THETA=0.0004;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 16609028 . CT C 478 PASS INDEL;BAVGPOST=0.987;BRSQ=0.743;LDAF=0.0361;AVGPOST=0.9725;RSQ=0.6872;ERATE=0.0025;THETA=0.0006;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 16609059 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.986;LDAF=0.2914;AVGPOST=0.9945;RSQ=0.9902;ERATE=0.0004;THETA=0.0004;AC=639;AN=2184 GT:DS:GL:BD 0.29258242 0
1 16609081 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8247;ERATE=0.0005;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16609149 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0226;AVGPOST=0.9979;RSQ=0.9696;ERATE=0.0004;THETA=0.0006;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 16609246 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.965;BRSQ=0.183;LDAF=0.9471;AVGPOST=0.9391;RSQ=0.5170;ERATE=0.0049;THETA=0.0006;AC=2106;AN=2184 GT:DS:GL:BD 0.96428573 1
1 16609274 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.943;BRSQ=0.141;LDAF=0.8982;AVGPOST=0.8343;RSQ=0.2827;ERATE=0.0128;THETA=0.0007;AC=2089;AN=2184 GT:DS:GL:BD 0.95650184 1
1 16609281 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.930;BRSQ=0.132;LDAF=0.8622;AVGPOST=0.8130;RSQ=0.3735;ERATE=0.0131;THETA=0.0006;AC=1980;AN=2184 GT:DS:GL:BD 0.90659338 1
1 16609290 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.913;LDAF=0.0444;AVGPOST=0.9513;RSQ=0.5677;ERATE=0.0033;THETA=0.0006;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 16609368 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.725;LDAF=0.0206;AVGPOST=0.9938;RSQ=0.8777;ERATE=0.0004;THETA=0.0040;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 16609492 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0539;AVGPOST=0.9957;RSQ=0.9692;ERATE=0.0006;THETA=0.0004;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 16609608 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7771;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16609760 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16609800 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0064;AVGPOST=1.0000;RSQ=0.9966;ERATE=0.0003;THETA=0.0010;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 16609818 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.833;LDAF=0.0148;AVGPOST=0.9957;RSQ=0.8867;ERATE=0.0008;THETA=0.0011;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 16609852 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16610000 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.698;LDAF=0.0023;AVGPOST=0.9979;RSQ=0.6016;ERATE=0.0006;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16610356 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6750;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16610436 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6140;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16610437 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1708;AVGPOST=0.9958;RSQ=0.9880;ERATE=0.0005;THETA=0.0004;AC=373;AN=2184 GT:DS:GL:BD 0.17078754 0
1 16610458 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0073;AVGPOST=0.9989;RSQ=0.9309;ERATE=0.0003;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16610608 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9995;RSQ=0.9694;ERATE=0.0003;THETA=0.0020;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 16610653 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9905;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16610742 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16610772 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0528;AVGPOST=0.9994;RSQ=0.9954;ERATE=0.0003;THETA=0.0005;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 16610842 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6334;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16611024 . AT A 508 PASS INDEL;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0074;AVGPOST=0.9986;RSQ=0.9153;ERATE=0.0004;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16611034 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6523;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16611043 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0023;AVGPOST=0.9974;RSQ=0.6247;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16611096 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.967;BRSQ=0.681;LDAF=0.9588;AVGPOST=0.9621;RSQ=0.6494;ERATE=0.0028;THETA=0.0008;AC=2112;AN=2184 GT:DS:GL:BD 0.96703297 1
1 16611187 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6553;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16611189 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.782;LDAF=0.0021;AVGPOST=0.9978;RSQ=0.5978;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16611246 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2195;AVGPOST=0.9974;RSQ=0.9935;ERATE=0.0005;THETA=0.0004;AC=479;AN=2184 GT:DS:GL:BD 0.21932234 0
1 16611325 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.890;LDAF=0.0099;AVGPOST=0.9969;RSQ=0.8716;ERATE=0.0004;THETA=0.0007;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 16611463 rs78364893 T TCAAAAAACAAAA 35741 PASS INDEL;BAVGPOST=0.942;BRSQ=0.856;LDAF=0.2467;AVGPOST=0.9415;RSQ=0.8924;ERATE=0.0022;THETA=0.0009;AC=547;AN=2184 GT:DS:GL:BD 0.25045788 0
1 16611469 . A AACAAAACAAAAC 45779 PASS INDEL;BAVGPOST=0.944;BRSQ=0.857;LDAF=0.2409;AVGPOST=0.9304;RSQ=0.8649;ERATE=0.0103;THETA=0.0006;AC=512;AN=2184 GT:DS:GL:BD 0.23443224 0
1 16611498 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0079;AVGPOST=0.9985;RSQ=0.9252;ERATE=0.0004;THETA=0.0010;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 16611572 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0019;AVGPOST=0.9985;RSQ=0.6438;ERATE=0.0006;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16611595 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.534;LDAF=0.0023;AVGPOST=0.9978;RSQ=0.5931;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16611751 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0763;AVGPOST=0.9991;RSQ=0.9947;ERATE=0.0003;THETA=0.0007;AC=167;AN=2184 GT:DS:GL:BD 0.07646520 0
1 16611837 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0038;AVGPOST=0.9982;RSQ=0.7803;ERATE=0.0005;THETA=0.0011;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16611854 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.621;LDAF=0.0036;AVGPOST=0.9971;RSQ=0.6493;ERATE=0.0008;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16612024 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0309;AVGPOST=0.9994;RSQ=0.9912;ERATE=0.0004;THETA=0.0006;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 16612096 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0076;AVGPOST=0.9994;RSQ=0.9626;ERATE=0.0004;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 16612193 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0036;AVGPOST=0.9993;RSQ=0.9229;ERATE=0.0003;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16612227 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16612324 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0075;AVGPOST=0.9997;RSQ=0.9794;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 16612362 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9799;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16612371 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0023;AVGPOST=0.9986;RSQ=0.7579;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16612507 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.904;LDAF=0.0384;AVGPOST=0.9978;RSQ=0.9771;ERATE=0.0004;THETA=0.0011;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 16612545 rs112315896 A AT 697 PASS INDEL;BAVGPOST=0.996;BRSQ=0.905;LDAF=0.0210;AVGPOST=0.9892;RSQ=0.8041;ERATE=0.0021;THETA=0.0006;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 16612643 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0175;AVGPOST=0.9984;RSQ=0.9704;ERATE=0.0003;THETA=0.0012;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 16612644 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.5920;ERATE=0.0007;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16612773 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9843;ERATE=0.0003;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 16612795 . AAG A 92 PASS INDEL;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8450;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16612985 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.866;LDAF=0.0080;AVGPOST=0.9972;RSQ=0.8651;ERATE=0.0005;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 16613093 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.928;LDAF=0.0151;AVGPOST=0.9982;RSQ=0.9474;ERATE=0.0004;THETA=0.0026;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 16613101 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0468;AVGPOST=0.9975;RSQ=0.9808;ERATE=0.0003;THETA=0.0006;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 16613216 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6141;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16613257 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.8144;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16613298 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2194;AVGPOST=0.9993;RSQ=0.9982;ERATE=0.0004;THETA=0.0007;AC=479;AN=2184 GT:DS:GL:BD 0.21932234 0
1 16613611 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0307;AVGPOST=0.9998;RSQ=0.9970;ERATE=0.0003;THETA=0.0005;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 16613660 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2932;AVGPOST=0.9990;RSQ=0.9981;ERATE=0.0004;THETA=0.0005;AC=641;AN=2184 GT:DS:GL:BD 0.29349816 0
1 16613697 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.7030;ERATE=0.0003;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16613700 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6552;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16613716 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0032;AVGPOST=0.9997;RSQ=0.9603;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16613783 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6326;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16613803 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7963;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16613807 rs61145990 TTCTC T 9764 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0307;AVGPOST=0.9998;RSQ=0.9975;ERATE=0.0003;THETA=0.0003;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 16613819 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9995;RSQ=0.9701;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16613878 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0068;AVGPOST=0.9998;RSQ=0.9890;ERATE=0.0003;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16613882 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7959;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16613910 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0070;AVGPOST=0.9994;RSQ=0.9602;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16614000 . A AG 61 PASS INDEL;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0023;AVGPOST=0.9979;RSQ=0.6084;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16614125 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5246;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16614268 . AG A 624 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0067;AVGPOST=0.9989;RSQ=0.9308;ERATE=0.0003;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 16614302 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0032;AVGPOST=0.9989;RSQ=0.8447;ERATE=0.0004;THETA=0.0042;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16614303 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0042;AVGPOST=0.9978;RSQ=0.7844;ERATE=0.0004;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16614344 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0121;AVGPOST=0.9986;RSQ=0.9627;ERATE=0.0003;THETA=0.0015;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 16614742 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0067;AVGPOST=0.9991;RSQ=0.9379;ERATE=0.0003;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 16614872 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0086;AVGPOST=0.9989;RSQ=0.9381;ERATE=0.0004;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 16614947 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.953;BRSQ=0.903;LDAF=0.6620;AVGPOST=0.9071;RSQ=0.8508;ERATE=0.0165;THETA=0.0008;AC=1477;AN=2184 GT:DS:GL:BD 0.67628205 1
1 16615174 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.648;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.5499;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16615453 . A AT 1011 PASS INDEL;BAVGPOST=0.995;BRSQ=0.905;LDAF=0.0288;AVGPOST=0.9934;RSQ=0.9145;ERATE=0.0006;THETA=0.0009;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 16615454 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.898;LDAF=0.0258;AVGPOST=0.9913;RSQ=0.8800;ERATE=0.0005;THETA=0.0009;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 16615493 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.714;LDAF=0.0021;AVGPOST=0.9991;RSQ=0.8472;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16615535 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0038;AVGPOST=0.9979;RSQ=0.7872;ERATE=0.0003;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16615598 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0311;AVGPOST=0.9990;RSQ=0.9885;ERATE=0.0003;THETA=0.0007;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 16615627 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.779;LDAF=0.0040;AVGPOST=0.9987;RSQ=0.8689;ERATE=0.0004;THETA=0.0014;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16615737 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.744;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6686;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16615778 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16615832 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8519;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16615924 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.961;LDAF=0.0185;AVGPOST=0.9967;RSQ=0.9375;ERATE=0.0006;THETA=0.0005;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 16616085 . A AC 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6196;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16616138 . T TA 9353 PASS INDEL;BAVGPOST=0.992;BRSQ=0.981;LDAF=0.2896;AVGPOST=0.9927;RSQ=0.9861;ERATE=0.0008;THETA=0.0014;AC=635;AN=2184 GT:DS:GL:BD 0.29075092 0
1 16616139 rs34247809 A AT 37186 PASS INDEL;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.2919;AVGPOST=0.9940;RSQ=0.9890;ERATE=0.0004;THETA=0.0005;AC=639;AN=2184 GT:DS:GL:BD 0.29258242 0
1 16616204 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0024;AVGPOST=0.9984;RSQ=0.7517;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16616238 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6996;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16616371 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5400;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16616447 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16616639 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16616796 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7891;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16616797 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0004;AVGPOST=0.9995;RSQ=0.5607;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16616810 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16616939 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0018;AVGPOST=0.9977;RSQ=0.4879;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16617007 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0229;AVGPOST=0.9982;RSQ=0.9652;ERATE=0.0007;THETA=0.0004;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 16617113 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.6125;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16617129 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0087;AVGPOST=0.9999;RSQ=0.9931;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 16617141 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.567;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5091;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16617371 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16617449 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0215;AVGPOST=1.0000;RSQ=0.9990;ERATE=0.0003;THETA=0.0008;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 16617487 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.686;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16617488 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.829;LDAF=0.0066;AVGPOST=0.9982;RSQ=0.8918;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 16617677 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0075;AVGPOST=0.9996;RSQ=0.9748;ERATE=0.0003;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 16617684 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5763;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16617735 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8083;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16617812 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2191;AVGPOST=0.9989;RSQ=0.9974;ERATE=0.0003;THETA=0.0005;AC=479;AN=2184 GT:DS:GL:BD 0.21932234 0
1 16617860 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.870;LDAF=0.0028;AVGPOST=0.9987;RSQ=0.8043;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16617911 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2940;AVGPOST=0.9951;RSQ=0.9906;ERATE=0.0007;THETA=0.0006;AC=643;AN=2184 GT:DS:GL:BD 0.29441392 0
1 16618137 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5763;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16618156 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0032;AVGPOST=0.9996;RSQ=0.9482;ERATE=0.0004;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16618193 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6282;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16618207 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2191;AVGPOST=0.9991;RSQ=0.9977;ERATE=0.0003;THETA=0.0004;AC=479;AN=2184 GT:DS:GL:BD 0.21932234 0
1 16618245 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.671;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4416;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16618273 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.854;LDAF=0.0040;AVGPOST=0.9992;RSQ=0.9120;ERATE=0.0004;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16618332 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.928;LDAF=0.9877;AVGPOST=0.9985;RSQ=0.9433;ERATE=0.0005;THETA=0.0006;AC=2158;AN=2184 GT:DS:GL:BD 0.98809522 1
1 16618407 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.607;LDAF=0.0025;AVGPOST=0.9983;RSQ=0.7094;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16618442 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.987;LDAF=0.2685;AVGPOST=0.9951;RSQ=0.9908;ERATE=0.0005;THETA=0.0007;AC=586;AN=2184 GT:DS:GL:BD 0.26831502 0
1 16618604 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5746;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16618684 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0307;AVGPOST=0.9999;RSQ=0.9981;ERATE=0.0003;THETA=0.0004;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 16618744 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5972;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16618751 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0150;AVGPOST=0.9985;RSQ=0.9577;ERATE=0.0003;THETA=0.0009;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 16618809 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0512;AVGPOST=0.9982;RSQ=0.9849;ERATE=0.0004;THETA=0.0013;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 16618861 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8675;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16619116 rs111994651 G GT 860 PASS INDEL;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0078;AVGPOST=0.9979;RSQ=0.8884;ERATE=0.0005;THETA=0.0008;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 16619350 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2196;AVGPOST=0.9989;RSQ=0.9969;ERATE=0.0005;THETA=0.0007;AC=479;AN=2184 GT:DS:GL:BD 0.21932234 0
1 16619371 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5400;ERATE=0.0003;THETA=0.0043;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16619483 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0217;AVGPOST=0.9996;RSQ=0.9920;ERATE=0.0004;THETA=0.0005;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 16619627 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2934;AVGPOST=0.9982;RSQ=0.9966;ERATE=0.0005;THETA=0.0003;AC=642;AN=2184 GT:DS:GL:BD 0.29395604 0
1 16619721 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0309;AVGPOST=0.9994;RSQ=0.9912;ERATE=0.0004;THETA=0.0004;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 16619734 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0073;AVGPOST=0.9990;RSQ=0.9375;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16619735 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0083;AVGPOST=0.9980;RSQ=0.9115;ERATE=0.0004;THETA=0.0008;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 16619836 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.664;LDAF=0.0015;AVGPOST=0.9978;RSQ=0.3572;ERATE=0.0007;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16619851 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2202;AVGPOST=0.9984;RSQ=0.9964;ERATE=0.0003;THETA=0.0007;AC=481;AN=2184 GT:DS:GL:BD 0.22023809 0
1 16620138 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6422;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16620160 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.7903;AVGPOST=0.9977;RSQ=0.9946;ERATE=0.0005;THETA=0.0004;AC=1725;AN=2184 GT:DS:GL:BD 0.78983516 1
1 16620366 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16620401 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0216;AVGPOST=0.9998;RSQ=0.9953;ERATE=0.0003;THETA=0.0007;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 16620415 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.906;LDAF=0.0219;AVGPOST=0.9941;RSQ=0.8923;ERATE=0.0004;THETA=0.0004;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 16620537 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9351;ERATE=0.0003;THETA=0.0036;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16620589 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2933;AVGPOST=0.9971;RSQ=0.9949;ERATE=0.0006;THETA=0.0003;AC=639;AN=2184 GT:DS:GL:BD 0.29258242 0
1 16620605 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6651;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16620625 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7303;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16620752 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8323;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16620820 . C CT 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5409;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16621183 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7075;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=1544;AN=2184 GT:DS:GL:BD 0.70695972 1
1 16621218 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16621234 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0338;AVGPOST=0.9999;RSQ=0.9989;ERATE=0.0003;THETA=0.0006;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 16621236 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16621432 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0448;AVGPOST=0.9999;RSQ=0.9991;ERATE=0.0003;THETA=0.0007;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 16621652 . G GT 63 PASS INDEL;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.4674;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16621682 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=1.0000;RSQ=0.9968;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 16621828 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8559;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16621948 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.732;LDAF=0.9633;AVGPOST=0.9623;RSQ=0.6133;ERATE=0.0032;THETA=0.0007;AC=2121;AN=2184 GT:DS:GL:BD 0.97115386 1
1 16622042 . CA C 22108 PASS INDEL;BAVGPOST=0.954;BRSQ=0.321;LDAF=0.9239;AVGPOST=0.8918;RSQ=0.3922;ERATE=0.0165;THETA=0.0006;AC=2097;AN=2184 GT:DS:GL:BD 0.96016484 1
1 16622072 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0312;AVGPOST=0.9986;RSQ=0.9818;ERATE=0.0006;THETA=0.0006;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 16622108 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.560;LDAF=0.0254;AVGPOST=0.9727;RSQ=0.5837;ERATE=0.0053;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 16622257 . A AGTCCAATG 2460 PASS INDEL;BAVGPOST=0.996;BRSQ=0.784;LDAF=0.0070;AVGPOST=0.9985;RSQ=0.9226;ERATE=0.0004;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 16622309 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9308;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16622311 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9905;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16622546 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2940;AVGPOST=0.9984;RSQ=0.9967;ERATE=0.0005;THETA=0.0005;AC=642;AN=2184 GT:DS:GL:BD 0.29395604 0
1 16622561 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6933;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16622645 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6057;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16622684 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6078;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16622738 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.880;LDAF=0.0054;AVGPOST=0.9995;RSQ=0.9660;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 16622936 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0311;AVGPOST=0.9989;RSQ=0.9850;ERATE=0.0005;THETA=0.0005;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 16622942 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0203;AVGPOST=0.9844;RSQ=0.7058;ERATE=0.0007;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 16623217 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.9013;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16623252 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.766;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.5953;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16623443 rs59857563 G GT 162 PASS INDEL;BAVGPOST=0.971;BRSQ=0.623;LDAF=0.0695;AVGPOST=0.9129;RSQ=0.5169;ERATE=0.0068;THETA=0.0003;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 16623558 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.739;LDAF=0.0059;AVGPOST=0.9962;RSQ=0.7411;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16623575 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.756;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.3893;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16623658 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.980;LDAF=0.2175;AVGPOST=0.9960;RSQ=0.9902;ERATE=0.0006;THETA=0.0004;AC=476;AN=2184 GT:DS:GL:BD 0.21794872 0
1 16623731 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0081;AVGPOST=0.9992;RSQ=0.9595;ERATE=0.0003;THETA=0.0008;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 16623780 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5255;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16623799 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.732;LDAF=0.0192;AVGPOST=0.9940;RSQ=0.8786;ERATE=0.0005;THETA=0.0003;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 16623830 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=0.9983;RSQ=0.8199;ERATE=0.0004;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16623862 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0034;AVGPOST=0.9989;RSQ=0.8599;ERATE=0.0005;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16623936 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6530;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16623963 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6684;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16624078 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.995;LDAF=0.4151;AVGPOST=0.9955;RSQ=0.9935;ERATE=0.0006;THETA=0.0005;AC=904;AN=2184 GT:DS:GL:BD 0.41391942 0
1 16624094 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.492;LDAF=0.0037;AVGPOST=0.9961;RSQ=0.5989;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16624217 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.794;LDAF=0.0082;AVGPOST=0.9970;RSQ=0.8563;ERATE=0.0006;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 16624218 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0327;AVGPOST=0.9971;RSQ=0.9643;ERATE=0.0007;THETA=0.0007;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 16624391 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0051;AVGPOST=0.9973;RSQ=0.7656;ERATE=0.0004;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16624403 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8247;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16624469 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.740;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4360;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16624491 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.661;LDAF=0.0027;AVGPOST=0.9969;RSQ=0.5190;ERATE=0.0006;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16624507 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.677;LDAF=0.0055;AVGPOST=0.9946;RSQ=0.6339;ERATE=0.0005;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16624613 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.763;LDAF=0.0068;AVGPOST=0.9940;RSQ=0.6921;ERATE=0.0005;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16624700 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0074;AVGPOST=0.9989;RSQ=0.9357;ERATE=0.0004;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16625132 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0352;AVGPOST=0.9860;RSQ=0.8514;ERATE=0.0005;THETA=0.0008;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 16625285 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0045;AVGPOST=0.9975;RSQ=0.7688;ERATE=0.0005;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16625436 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8497;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16625512 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.965;BRSQ=0.917;LDAF=0.7467;AVGPOST=0.9592;RSQ=0.9196;ERATE=0.0061;THETA=0.0004;AC=1638;AN=2184 GT:DS:GL:BD 0.75000000 1
1 16625757 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.911;LDAF=0.0178;AVGPOST=0.9967;RSQ=0.9177;ERATE=0.0006;THETA=0.0007;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 16625808 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.819;LDAF=0.0039;AVGPOST=0.9985;RSQ=0.8342;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16625859 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4915;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16625884 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1671;AVGPOST=0.9984;RSQ=0.9945;ERATE=0.0005;THETA=0.0004;AC=365;AN=2184 GT:DS:GL:BD 0.16712454 0
1 16626150 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.952;LDAF=0.0763;AVGPOST=0.9836;RSQ=0.9261;ERATE=0.0028;THETA=0.0006;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 16626158 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.805;LDAF=0.0335;AVGPOST=0.9816;RSQ=0.7881;ERATE=0.0038;THETA=0.0005;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 16626202 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0020;AVGPOST=0.9990;RSQ=0.7764;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16626264 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.752;LDAF=0.0049;AVGPOST=0.9969;RSQ=0.7498;ERATE=0.0004;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16626274 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16626278 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2935;AVGPOST=0.9979;RSQ=0.9959;ERATE=0.0004;THETA=0.0009;AC=641;AN=2184 GT:DS:GL:BD 0.29349816 0
1 16626416 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0151;AVGPOST=0.9982;RSQ=0.9544;ERATE=0.0004;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 16626433 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0022;AVGPOST=0.9977;RSQ=0.6104;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16626440 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.6957;AVGPOST=0.9916;RSQ=0.9848;ERATE=0.0012;THETA=0.0003;AC=1521;AN=2184 GT:DS:GL:BD 0.69642860 1
1 16626482 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7871;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16626488 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16626508 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7891;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16626616 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5691;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16626648 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0145;AVGPOST=0.9992;RSQ=0.9772;ERATE=0.0004;THETA=0.0012;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 16626745 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8739;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16626786 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0026;AVGPOST=0.9998;RSQ=0.9611;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16626865 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8006;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16626893 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6616;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16626955 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16626960 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6819;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16627015 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0219;AVGPOST=0.9992;RSQ=0.9850;ERATE=0.0003;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 16627146 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=0.9997;RSQ=0.9851;ERATE=0.0003;THETA=0.0008;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 16627272 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0224;AVGPOST=0.9995;RSQ=0.9912;ERATE=0.0004;THETA=0.0004;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 16627315 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16627367 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0224;AVGPOST=0.9999;RSQ=0.9981;ERATE=0.0003;THETA=0.0008;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 16627538 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0019;AVGPOST=0.9970;RSQ=0.4153;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16627550 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0227;AVGPOST=0.9993;RSQ=0.9867;ERATE=0.0004;THETA=0.0006;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 16627551 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0037;AVGPOST=0.9941;RSQ=0.4098;ERATE=0.0009;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16627643 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.639;LDAF=0.0024;AVGPOST=0.9986;RSQ=0.7290;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16627865 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0013;AVGPOST=0.9997;RSQ=0.9061;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16627968 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2183;AVGPOST=0.9967;RSQ=0.9926;ERATE=0.0004;THETA=0.0002;AC=476;AN=2184 GT:DS:GL:BD 0.21794872 0
1 16627969 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.628;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4398;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16627979 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0118;AVGPOST=0.9992;RSQ=0.9707;ERATE=0.0004;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 16628019 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.427;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7046;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16628074 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0222;AVGPOST=0.9985;RSQ=0.9736;ERATE=0.0003;THETA=0.0007;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 16628107 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.2911;AVGPOST=0.9957;RSQ=0.9910;ERATE=0.0007;THETA=0.0006;AC=636;AN=2184 GT:DS:GL:BD 0.29120880 0
1 16628127 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.776;LDAF=0.0021;AVGPOST=0.9972;RSQ=0.4433;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16628165 rs55778294 C CA 1475 PASS INDEL;BAVGPOST=0.787;BRSQ=0.415;LDAF=0.2759;AVGPOST=0.7246;RSQ=0.4235;ERATE=0.0654;THETA=0.0006;AC=419;AN=2184 GT:DS:GL:BD 0.19184981 0
1 16628182 rs55775430 C CA 5683 PASS INDEL;BAVGPOST=0.943;BRSQ=0.841;LDAF=0.2569;AVGPOST=0.8531;RSQ=0.6913;ERATE=0.0339;THETA=0.0008;AC=498;AN=2184 GT:DS:GL:BD 0.22802198 0
1 16628240 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5441;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16628244 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.729;LDAF=0.0089;AVGPOST=0.9972;RSQ=0.8712;ERATE=0.0005;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 16628333 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0308;AVGPOST=0.9994;RSQ=0.9918;ERATE=0.0004;THETA=0.0005;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 16628380 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4078;AVGPOST=0.9979;RSQ=0.9966;ERATE=0.0004;THETA=0.0005;AC=889;AN=2184 GT:DS:GL:BD 0.40705130 0
1 16628441 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0149;AVGPOST=0.9983;RSQ=0.9612;ERATE=0.0004;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 16628455 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0086;AVGPOST=0.9992;RSQ=0.9657;ERATE=0.0004;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 16628483 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0066;AVGPOST=0.9995;RSQ=0.9720;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 16628569 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8860;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16628802 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0307;AVGPOST=0.9997;RSQ=0.9963;ERATE=0.0003;THETA=0.0006;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 16628920 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1683;AVGPOST=0.9983;RSQ=0.9944;ERATE=0.0005;THETA=0.0010;AC=368;AN=2184 GT:DS:GL:BD 0.16849817 0
1 16628945 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.4532;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16629100 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0062;AVGPOST=0.9994;RSQ=0.9599;ERATE=0.0004;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 16629128 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.691;LDAF=0.0016;AVGPOST=0.9976;RSQ=0.3072;ERATE=0.0006;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16629166 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.943;LDAF=0.2823;AVGPOST=0.9610;RSQ=0.9286;ERATE=0.0083;THETA=0.0004;AC=618;AN=2184 GT:DS:GL:BD 0.28296703 0
1 16629248 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.562;LDAF=0.0021;AVGPOST=0.9976;RSQ=0.5437;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16629297 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0319;AVGPOST=0.9981;RSQ=0.9786;ERATE=0.0006;THETA=0.0002;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 16629344 . CTT C 282 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0058;AVGPOST=0.9993;RSQ=0.9543;ERATE=0.0003;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 16629389 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6075;ERATE=0.0005;THETA=0.0052;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16629428 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0047;AVGPOST=0.9994;RSQ=0.9500;ERATE=0.0004;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16629469 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16629509 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.5870;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16629596 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0151;AVGPOST=0.9999;RSQ=0.9974;ERATE=0.0003;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 16629645 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0030;AVGPOST=0.9993;RSQ=0.8862;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16629678 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7517;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16629869 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.4068;AVGPOST=0.9947;RSQ=0.9932;ERATE=0.0003;THETA=0.0006;AC=888;AN=2184 GT:DS:GL:BD 0.40659341 0
1 16630150 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0160;AVGPOST=0.9979;RSQ=0.9463;ERATE=0.0005;THETA=0.0006;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 16630273 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1652;AVGPOST=0.9946;RSQ=0.9849;ERATE=0.0004;THETA=0.0006;AC=361;AN=2184 GT:DS:GL:BD 0.16529304 0
1 16630288 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.954;LDAF=0.3952;AVGPOST=0.9824;RSQ=0.9775;ERATE=0.0006;THETA=0.0005;AC=866;AN=2184 GT:DS:GL:BD 0.39652014 0
1 16630412 . T TTA 126 PASS INDEL;BAVGPOST=0.995;BRSQ=0.701;LDAF=0.0164;AVGPOST=0.9817;RSQ=0.5606;ERATE=0.0025;THETA=0.0027;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 16630414 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.737;LDAF=0.0017;AVGPOST=0.9976;RSQ=0.3753;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16630423 . T TA 140 PASS INDEL;BAVGPOST=0.997;BRSQ=0.735;LDAF=0.0055;AVGPOST=0.9943;RSQ=0.6598;ERATE=0.0006;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16630424 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0087;AVGPOST=0.9966;RSQ=0.8669;ERATE=0.0004;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 16630437 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.766;LDAF=0.0021;AVGPOST=0.9978;RSQ=0.6042;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16630546 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.635;LDAF=0.0034;AVGPOST=0.9971;RSQ=0.6079;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16630626 . TC T 17250 PASS INDEL;BAVGPOST=0.993;BRSQ=0.100;LDAF=0.9801;AVGPOST=0.9733;RSQ=0.4567;ERATE=0.0018;THETA=0.0003;AC=2156;AN=2184 GT:DS:GL:BD 0.98717946 1
1 16630740 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.897;LDAF=0.0070;AVGPOST=0.9968;RSQ=0.8223;ERATE=0.0005;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 16630742 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.749;LDAF=0.0030;AVGPOST=0.9965;RSQ=0.5616;ERATE=0.0006;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16630749 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0167;AVGPOST=0.9992;RSQ=0.9834;ERATE=0.0003;THETA=0.0006;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 16630849 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5033;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16630943 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5265;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16630992 . CATGTATT C 225 PASS INDEL;BAVGPOST=1.000;BRSQ=0.766;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4839;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16631123 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0140;AVGPOST=0.9988;RSQ=0.9678;ERATE=0.0003;THETA=0.0021;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 16631168 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0083;AVGPOST=0.9998;RSQ=0.9913;ERATE=0.0003;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 16631190 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0022;AVGPOST=0.9987;RSQ=0.7541;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16631274 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.624;LDAF=0.0141;AVGPOST=0.9894;RSQ=0.6914;ERATE=0.0006;THETA=0.0006;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 16631293 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0085;AVGPOST=0.9959;RSQ=0.8218;ERATE=0.0005;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16631331 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.767;LDAF=0.0021;AVGPOST=0.9966;RSQ=0.4070;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16631418 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0052;AVGPOST=0.9981;RSQ=0.8542;ERATE=0.0004;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16631477 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.970;LDAF=0.0549;AVGPOST=0.9942;RSQ=0.9595;ERATE=0.0007;THETA=0.0006;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 16631517 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0025;AVGPOST=0.9968;RSQ=0.5171;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16631743 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.600;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4140;ERATE=0.0008;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16631750 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0531;AVGPOST=0.9987;RSQ=0.9907;ERATE=0.0004;THETA=0.0006;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 16631911 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6223;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16631953 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9997;RSQ=0.9832;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 16631992 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9058;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16631993 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4962;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16632014 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0088;AVGPOST=0.9997;RSQ=0.9869;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 16632141 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16632188 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0500;AVGPOST=0.9997;RSQ=0.9979;ERATE=0.0003;THETA=0.0005;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 16632200 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16632302 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16632395 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16632430 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0037;AVGPOST=1.0000;RSQ=0.9941;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16632492 . GTTT G 465 PASS INDEL;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9607;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16632558 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9469;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16632580 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0310;AVGPOST=0.9991;RSQ=0.9898;ERATE=0.0003;THETA=0.0014;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 16632586 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.600;LDAF=0.0025;AVGPOST=0.9964;RSQ=0.4602;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16632680 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16632775 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.616;LDAF=0.0120;AVGPOST=0.9941;RSQ=0.8189;ERATE=0.0004;THETA=0.0008;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 16632803 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0081;AVGPOST=0.9984;RSQ=0.9224;ERATE=0.0004;THETA=0.0009;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 16632976 rs36215739 CTTTTA C 5920 PASS INDEL;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0313;AVGPOST=0.9981;RSQ=0.9777;ERATE=0.0003;THETA=0.0027;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 16633094 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0224;AVGPOST=0.9997;RSQ=0.9942;ERATE=0.0004;THETA=0.0004;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 16633116 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5905;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16633123 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0504;AVGPOST=0.9993;RSQ=0.9936;ERATE=0.0003;THETA=0.0009;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 16633188 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0164;AVGPOST=0.9992;RSQ=0.9801;ERATE=0.0003;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 16633194 . GTTTA G 152 PASS INDEL;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0037;AVGPOST=0.9974;RSQ=0.7657;ERATE=0.0005;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16633201 . TA T 13 PASS INDEL;BAVGPOST=0.994;BRSQ=0.527;LDAF=0.0055;AVGPOST=0.9933;RSQ=0.5624;ERATE=0.0006;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16633202 . AT A 4096 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0316;AVGPOST=0.9994;RSQ=0.9920;ERATE=0.0004;THETA=0.0006;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 16633241 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.789;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.7190;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16633401 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.689;LDAF=0.0047;AVGPOST=0.9974;RSQ=0.7679;ERATE=0.0008;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16633589 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.955;BRSQ=0.922;LDAF=0.7119;AVGPOST=0.9400;RSQ=0.8938;ERATE=0.0174;THETA=0.0006;AC=1575;AN=2184 GT:DS:GL:BD 0.72115386 1
1 16633606 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.954;LDAF=0.2131;AVGPOST=0.9930;RSQ=0.9830;ERATE=0.0007;THETA=0.0005;AC=469;AN=2184 GT:DS:GL:BD 0.21474358 0
1 16633720 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.525;LDAF=0.0053;AVGPOST=0.9983;RSQ=0.8580;ERATE=0.0004;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16633746 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0118;AVGPOST=0.9973;RSQ=0.9178;ERATE=0.0004;THETA=0.0009;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 16633772 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.780;LDAF=0.0100;AVGPOST=0.9963;RSQ=0.8446;ERATE=0.0006;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 16633972 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0309;AVGPOST=0.9993;RSQ=0.9909;ERATE=0.0004;THETA=0.0005;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 16634166 . A ATAC 103 PASS INDEL;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16634404 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9908;ERATE=0.0003;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16634508 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7756;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16634646 . A AT 4073 PASS INDEL;BAVGPOST=0.996;BRSQ=0.955;LDAF=0.0370;AVGPOST=0.9882;RSQ=0.8805;ERATE=0.0037;THETA=0.0006;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 16634655 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0186;AVGPOST=0.9986;RSQ=0.9701;ERATE=0.0004;THETA=0.0006;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 16634657 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0021;AVGPOST=0.9968;RSQ=0.4651;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16634683 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2184;AVGPOST=0.9978;RSQ=0.9950;ERATE=0.0005;THETA=0.0027;AC=476;AN=2184 GT:DS:GL:BD 0.21794872 0
1 16634755 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4660;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16634774 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6552;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16634824 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0013;AVGPOST=0.9981;RSQ=0.4383;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16634863 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0308;AVGPOST=0.9996;RSQ=0.9944;ERATE=0.0003;THETA=0.0009;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 16634910 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6313;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16634918 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.640;LDAF=0.0017;AVGPOST=0.9974;RSQ=0.3794;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16634923 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1680;AVGPOST=0.9992;RSQ=0.9974;ERATE=0.0003;THETA=0.0004;AC=368;AN=2184 GT:DS:GL:BD 0.16849817 0
1 16634983 . A ATC 385 PASS INDEL;BAVGPOST=0.987;BRSQ=0.723;LDAF=0.0595;AVGPOST=0.9399;RSQ=0.6017;ERATE=0.0022;THETA=0.0004;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 16634990 rs113046858 T TC 435 PASS INDEL;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0186;AVGPOST=0.9986;RSQ=0.9708;ERATE=0.0003;THETA=0.0008;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 16635013 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.955;LDAF=0.2857;AVGPOST=0.9824;RSQ=0.9694;ERATE=0.0027;THETA=0.0004;AC=627;AN=2184 GT:DS:GL:BD 0.28708792 0
1 16635187 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.630;LDAF=0.0041;AVGPOST=0.9982;RSQ=0.8114;ERATE=0.0005;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16635309 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0089;AVGPOST=0.9975;RSQ=0.9083;ERATE=0.0004;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 16635327 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.746;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7298;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16635626 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.536;LDAF=0.0068;AVGPOST=0.9948;RSQ=0.7058;ERATE=0.0005;THETA=0.0011;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 16635661 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.617;LDAF=0.0018;AVGPOST=0.9975;RSQ=0.4405;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16635709 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0220;AVGPOST=0.9975;RSQ=0.9585;ERATE=0.0003;THETA=0.0005;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 16635717 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.673;LDAF=0.0019;AVGPOST=0.9970;RSQ=0.3197;ERATE=0.0007;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16636023 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8492;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16636043 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2940;AVGPOST=0.9964;RSQ=0.9934;ERATE=0.0007;THETA=0.0008;AC=641;AN=2184 GT:DS:GL:BD 0.29349816 0
1 16636114 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0053;AVGPOST=0.9943;RSQ=0.5763;ERATE=0.0009;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16636145 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.734;LDAF=0.0020;AVGPOST=0.9978;RSQ=0.5741;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16636168 . A AC 24 PASS INDEL;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5309;ERATE=0.0005;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16636294 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.676;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4058;ERATE=0.0005;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16636414 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2719;AVGPOST=0.9970;RSQ=0.9935;ERATE=0.0005;THETA=0.0005;AC=595;AN=2184 GT:DS:GL:BD 0.27243590 0
1 16636443 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.975;LDAF=0.1683;AVGPOST=0.9896;RSQ=0.9721;ERATE=0.0008;THETA=0.0004;AC=366;AN=2184 GT:DS:GL:BD 0.16758242 0
1 16636480 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0045;AVGPOST=0.9964;RSQ=0.6535;ERATE=0.0007;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16636532 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.736;LDAF=0.0018;AVGPOST=0.9974;RSQ=0.4689;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16636553 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6786;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16636577 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0226;AVGPOST=0.9991;RSQ=0.9825;ERATE=0.0003;THETA=0.0003;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 16636939 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.773;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4795;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16636976 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6721;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16637217 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0219;AVGPOST=0.9992;RSQ=0.9825;ERATE=0.0004;THETA=0.0005;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 16637273 . ATTAT A 32 PASS INDEL;BAVGPOST=1.000;BRSQ=0.740;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.3612;ERATE=0.0009;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16637457 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.849;LDAF=0.0027;AVGPOST=0.9978;RSQ=0.6632;ERATE=0.0007;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16637523 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0322;AVGPOST=0.9966;RSQ=0.9647;ERATE=0.0005;THETA=0.0009;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 16637540 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.662;LDAF=0.0039;AVGPOST=0.9975;RSQ=0.7328;ERATE=0.0004;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16637542 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5488;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16637582 . G GA 782 PASS INDEL;BAVGPOST=0.868;BRSQ=0.559;LDAF=0.1501;AVGPOST=0.8881;RSQ=0.6941;ERATE=0.0102;THETA=0.0004;AC=278;AN=2184 GT:DS:GL:BD 0.12728938 0
1 16637613 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0065;AVGPOST=0.9988;RSQ=0.9299;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 16637672 . CA C 583 PASS INDEL;BAVGPOST=0.872;BRSQ=0.310;LDAF=0.1931;AVGPOST=0.7592;RSQ=0.3574;ERATE=0.0416;THETA=0.0004;AC=231;AN=2184 GT:DS:GL:BD 0.10576923 0
1 16637685 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.931;LDAF=0.2312;AVGPOST=0.9501;RSQ=0.8902;ERATE=0.0116;THETA=0.0008;AC=491;AN=2184 GT:DS:GL:BD 0.22481684 0
1 16637737 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2194;AVGPOST=0.9976;RSQ=0.9940;ERATE=0.0004;THETA=0.0008;AC=479;AN=2184 GT:DS:GL:BD 0.21932234 0
1 16637744 . G GT 139 PASS INDEL;BAVGPOST=0.999;BRSQ=0.720;LDAF=0.0051;AVGPOST=0.9932;RSQ=0.5129;ERATE=0.0008;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16637750 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.5009;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16637813 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.767;LDAF=0.0025;AVGPOST=0.9965;RSQ=0.4701;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16637888 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0124;AVGPOST=0.9846;RSQ=0.5502;ERATE=0.0010;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 16637964 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0119;AVGPOST=0.9990;RSQ=0.9643;ERATE=0.0004;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 16637973 . ATCT A 214 PASS INDEL;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0040;AVGPOST=0.9984;RSQ=0.8135;ERATE=0.0006;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16638022 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.733;LDAF=0.0921;AVGPOST=0.9280;RSQ=0.6774;ERATE=0.0063;THETA=0.0014;AC=160;AN=2184 GT:DS:GL:BD 0.07326008 0
1 16638119 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7220;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16638415 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0088;AVGPOST=0.9999;RSQ=0.9932;ERATE=0.0003;THETA=0.0013;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 16638454 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.938;LDAF=0.0341;AVGPOST=0.9985;RSQ=0.9821;ERATE=0.0004;THETA=0.0025;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 16638496 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0057;AVGPOST=0.9934;RSQ=0.5787;ERATE=0.0003;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16638611 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0021;AVGPOST=0.9973;RSQ=0.5211;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16638701 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0321;AVGPOST=0.9991;RSQ=0.9881;ERATE=0.0004;THETA=0.0008;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 16638758 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7756;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16638798 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0020;AVGPOST=0.9975;RSQ=0.4843;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16638812 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0049;AVGPOST=0.9993;RSQ=0.9500;ERATE=0.0003;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16638864 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.759;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8702;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16638911 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9187;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16638962 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5394;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16638995 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0091;AVGPOST=0.9991;RSQ=0.9627;ERATE=0.0003;THETA=0.0010;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 16639054 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0306;AVGPOST=0.9998;RSQ=0.9970;ERATE=0.0003;THETA=0.0029;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 16639064 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0075;AVGPOST=0.9997;RSQ=0.9797;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 16639106 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9607;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16639110 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.797;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7443;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16639228 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.8264;ERATE=0.0003;THETA=0.0017;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16639262 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4938;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16639325 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5240;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16639393 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.872;LDAF=0.0067;AVGPOST=0.9982;RSQ=0.8934;ERATE=0.0004;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 16639528 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6620;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16639669 . AC A 983 PASS INDEL;BAVGPOST=0.965;BRSQ=0.900;LDAF=0.2122;AVGPOST=0.9908;RSQ=0.9778;ERATE=0.0005;THETA=0.0005;AC=467;AN=2184 GT:DS:GL:BD 0.21382783 0
1 16639670 rs67873210 CA C 20810 PASS INDEL;BAVGPOST=0.991;BRSQ=0.973;LDAF=0.2203;AVGPOST=0.9957;RSQ=0.9904;ERATE=0.0004;THETA=0.0004;AC=482;AN=2184 GT:DS:GL:BD 0.22069597 0
1 16639808 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0020;AVGPOST=0.9990;RSQ=0.7923;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16639988 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7117;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16640000 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16640072 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.7145;AVGPOST=0.9952;RSQ=0.9918;ERATE=0.0005;THETA=0.0004;AC=1558;AN=2184 GT:DS:GL:BD 0.71336997 1
1 16640249 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1686;AVGPOST=0.9983;RSQ=0.9952;ERATE=0.0003;THETA=0.0006;AC=368;AN=2184 GT:DS:GL:BD 0.16849817 0
1 16640267 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16640287 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0075;AVGPOST=0.9996;RSQ=0.9742;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 16640800 . TA T 274 PASS INDEL;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0034;AVGPOST=0.9984;RSQ=0.8078;ERATE=0.0005;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16640938 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0306;AVGPOST=0.9994;RSQ=0.9920;ERATE=0.0003;THETA=0.0008;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 16641236 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.975;LDAF=0.2189;AVGPOST=0.9985;RSQ=0.9963;ERATE=0.0004;THETA=0.0006;AC=479;AN=2184 GT:DS:GL:BD 0.21932234 0
1 16641240 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0101;AVGPOST=0.9987;RSQ=0.9448;ERATE=0.0004;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 16641332 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.619;LDAF=0.0020;AVGPOST=0.9985;RSQ=0.7023;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16641336 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.599;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.5692;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16641509 . T TA 481 PASS INDEL;BAVGPOST=0.994;BRSQ=0.699;LDAF=0.0054;AVGPOST=0.9954;RSQ=0.6752;ERATE=0.0007;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16641513 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2185;AVGPOST=0.9995;RSQ=0.9988;ERATE=0.0003;THETA=0.0005;AC=477;AN=2184 GT:DS:GL:BD 0.21840659 0
1 16641565 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16641583 . GA G 183 PASS INDEL;BAVGPOST=0.999;BRSQ=0.769;LDAF=0.0036;AVGPOST=0.9975;RSQ=0.6875;ERATE=0.0009;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16641590 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9709;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16641598 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16641606 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0101;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 16641797 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0046;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16641851 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.872;LDAF=0.0208;AVGPOST=0.9915;RSQ=0.8584;ERATE=0.0144;THETA=0.0006;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 16641872 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0050;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16641882 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16641899 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4082;AVGPOST=1.0000;RSQ=0.9999;ERATE=0.0003;THETA=0.0003;AC=890;AN=2184 GT:DS:GL:BD 0.40750915 0
1 16642001 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 16642017 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16642019 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9709;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16642100 . T TC 58 PASS INDEL;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5316;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16642158 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9438;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16642210 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9282;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16642265 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=0.9999;RSQ=0.9897;ERATE=0.0003;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 16642377 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16642387 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0027;AVGPOST=0.9994;RSQ=0.9134;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16642437 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.857;LDAF=0.0065;AVGPOST=0.9983;RSQ=0.8858;ERATE=0.0005;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 16642526 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0064;AVGPOST=0.9982;RSQ=0.8882;ERATE=0.0004;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 16642682 . AG A 16347 PASS INDEL;BAVGPOST=1.000;BRSQ=0;LDAF=0.9970;AVGPOST=0.9963;RSQ=0.5094;ERATE=0.0005;THETA=0.0004;AC=2179;AN=2184 GT:DS:GL:BD 0.99771065 1
1 16642722 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16642790 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2925;AVGPOST=0.9969;RSQ=0.9939;ERATE=0.0007;THETA=0.0002;AC=639;AN=2184 GT:DS:GL:BD 0.29258242 0
1 16642802 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6819;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16642849 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2935;AVGPOST=0.9986;RSQ=0.9973;ERATE=0.0004;THETA=0.0007;AC=642;AN=2184 GT:DS:GL:BD 0.29395604 0
1 16642937 . ATAG A 3149 PASS INDEL;BAVGPOST=0.994;BRSQ=0.855;LDAF=0.0212;AVGPOST=0.9933;RSQ=0.8665;ERATE=0.0013;THETA=0.0004;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 16643056 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.981;LDAF=0.2896;AVGPOST=0.9925;RSQ=0.9861;ERATE=0.0011;THETA=0.0004;AC=631;AN=2184 GT:DS:GL:BD 0.28891942 0
1 16643107 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0079;AVGPOST=0.9989;RSQ=0.9335;ERATE=0.0004;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 16643118 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0239;AVGPOST=0.9967;RSQ=0.9418;ERATE=0.0005;THETA=0.0003;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 16643143 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0229;AVGPOST=0.9984;RSQ=0.9638;ERATE=0.0006;THETA=0.0002;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 16643179 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.817;LDAF=0.0297;AVGPOST=0.9882;RSQ=0.8368;ERATE=0.0019;THETA=0.0002;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 16643395 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0308;AVGPOST=0.9997;RSQ=0.9958;ERATE=0.0003;THETA=0.0004;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 16643408 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.862;LDAF=0.0076;AVGPOST=0.9929;RSQ=0.6388;ERATE=0.0029;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 16643466 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0075;AVGPOST=0.9996;RSQ=0.9765;ERATE=0.0004;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 16643513 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0016;AVGPOST=0.9981;RSQ=0.5195;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16643604 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.726;LDAF=0.0057;AVGPOST=0.9957;RSQ=0.7415;ERATE=0.0005;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16643659 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0017;AVGPOST=0.9987;RSQ=0.7079;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16643703 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.963;LDAF=0.4004;AVGPOST=0.9861;RSQ=0.9811;ERATE=0.0006;THETA=0.0004;AC=882;AN=2184 GT:DS:GL:BD 0.40384614 0
1 16643731 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.967;LDAF=0.2979;AVGPOST=0.9528;RSQ=0.9177;ERATE=0.0129;THETA=0.0005;AC=637;AN=2184 GT:DS:GL:BD 0.29166666 0
1 16643832 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1675;AVGPOST=0.9987;RSQ=0.9962;ERATE=0.0004;THETA=0.0012;AC=367;AN=2184 GT:DS:GL:BD 0.16804029 0
1 16643843 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.977;LDAF=0.0221;AVGPOST=0.9982;RSQ=0.9685;ERATE=0.0005;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 16643871 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8282;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16643891 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.807;LDAF=0.0064;AVGPOST=0.9962;RSQ=0.7638;ERATE=0.0004;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16643902 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.776;LDAF=0.0039;AVGPOST=0.9979;RSQ=0.7658;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16643929 . A AC 527 PASS INDEL;BAVGPOST=0.974;BRSQ=0.633;LDAF=0.0487;AVGPOST=0.9560;RSQ=0.6281;ERATE=0.0086;THETA=0.0004;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 16643962 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0070;AVGPOST=0.9998;RSQ=0.9852;ERATE=0.0003;THETA=0.0030;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16643965 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6894;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16644027 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6880;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16644153 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6963;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16644189 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0080;AVGPOST=0.9996;RSQ=0.9787;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 16644315 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2201;AVGPOST=0.9963;RSQ=0.9911;ERATE=0.0008;THETA=0.0004;AC=479;AN=2184 GT:DS:GL:BD 0.21932234 0
1 16644319 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0223;AVGPOST=0.9984;RSQ=0.9742;ERATE=0.0004;THETA=0.0005;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 16644395 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0026;AVGPOST=0.9962;RSQ=0.4882;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16644401 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0215;AVGPOST=0.9999;RSQ=0.9980;ERATE=0.0003;THETA=0.0006;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 16644428 . AAAG A 192 PASS INDEL;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0037;AVGPOST=0.9988;RSQ=0.8571;ERATE=0.0006;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16644454 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8497;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16644465 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16644494 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0307;AVGPOST=0.9997;RSQ=0.9956;ERATE=0.0003;THETA=0.0006;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 16644498 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0008;AVGPOST=0.9999;RSQ=0.9310;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16644599 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0503;AVGPOST=0.9993;RSQ=0.9938;ERATE=0.0003;THETA=0.0008;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 16644607 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0056;AVGPOST=0.9992;RSQ=0.9441;ERATE=0.0004;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 16644636 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=0.9999;RSQ=0.9932;ERATE=0.0003;THETA=0.0009;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 16644742 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0050;AVGPOST=0.9992;RSQ=0.9374;ERATE=0.0005;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16644758 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.968;LDAF=0.3986;AVGPOST=0.9795;RSQ=0.9723;ERATE=0.0010;THETA=0.0026;AC=877;AN=2184 GT:DS:GL:BD 0.40155679 0
1 16644759 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9980;RSQ=0.8344;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16644853 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.806;LDAF=0.0018;AVGPOST=0.9980;RSQ=0.4982;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16644892 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.579;LDAF=0.0016;AVGPOST=0.9980;RSQ=0.5064;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16644928 rs113671097 G GT 29458 PASS INDEL;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2866;AVGPOST=0.9947;RSQ=0.9903;ERATE=0.0005;THETA=0.0006;AC=626;AN=2184 GT:DS:GL:BD 0.28663003 0
1 16644938 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0154;AVGPOST=0.9984;RSQ=0.9650;ERATE=0.0003;THETA=0.0005;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 16645046 . CAT C 1122 PASS INDEL;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0077;AVGPOST=0.9996;RSQ=0.9791;ERATE=0.0003;THETA=0.0007;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 16645048 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.839;LDAF=0.0079;AVGPOST=0.9989;RSQ=0.9413;ERATE=0.0003;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 16645095 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0033;AVGPOST=0.9978;RSQ=0.7049;ERATE=0.0005;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16645277 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.2941;AVGPOST=0.9989;RSQ=0.9978;ERATE=0.0005;THETA=0.0013;AC=642;AN=2184 GT:DS:GL:BD 0.29395604 0
1 16645311 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0050;AVGPOST=0.9994;RSQ=0.9523;ERATE=0.0005;THETA=0.0014;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16645499 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7127;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16645595 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2196;AVGPOST=0.9984;RSQ=0.9957;ERATE=0.0005;THETA=0.0010;AC=479;AN=2184 GT:DS:GL:BD 0.21932234 0
1 16645600 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8019;ERATE=0.0004;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16645629 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0150;AVGPOST=0.9986;RSQ=0.9695;ERATE=0.0003;THETA=0.0007;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 16645648 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0079;AVGPOST=0.9998;RSQ=0.9900;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 16645667 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5202;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16645721 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.5901;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16645736 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16645740 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6072;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16646020 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0306;AVGPOST=1.0000;RSQ=0.9994;ERATE=0.0003;THETA=0.0003;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 16646058 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0075;AVGPOST=0.9995;RSQ=0.9735;ERATE=0.0003;THETA=0.0009;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 16646123 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9989;RSQ=0.9108;ERATE=0.0003;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16646127 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9805;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16646186 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4330;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16646274 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0074;AVGPOST=0.9998;RSQ=0.9884;ERATE=0.0003;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 16646298 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9137;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16646367 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0064;AVGPOST=0.9985;RSQ=0.8947;ERATE=0.0005;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 16646501 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16646514 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7541;ERATE=0.0004;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16646588 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.669;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6057;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16646713 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.669;LDAF=0.0036;AVGPOST=0.9962;RSQ=0.5660;ERATE=0.0008;THETA=0.0020;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16646780 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.879;LDAF=0.0064;AVGPOST=0.9995;RSQ=0.9595;ERATE=0.0003;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 16646834 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0126;AVGPOST=0.9976;RSQ=0.9305;ERATE=0.0005;THETA=0.0009;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 16647009 . AT A 21 PASS INDEL;BAVGPOST=0.998;BRSQ=0.446;LDAF=0.0024;AVGPOST=0.9969;RSQ=0.4677;ERATE=0.0005;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16647109 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0308;AVGPOST=0.9995;RSQ=0.9931;ERATE=0.0004;THETA=0.0003;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 16647494 . A AG 54 PASS INDEL;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.5499;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16647629 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0308;AVGPOST=0.9997;RSQ=0.9956;ERATE=0.0004;THETA=0.0003;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 16647698 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8455;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16647725 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7285;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16647742 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0148;AVGPOST=0.9995;RSQ=0.9884;ERATE=0.0003;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 16647777 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8737;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16647785 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0146;AVGPOST=0.9990;RSQ=0.9759;ERATE=0.0003;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 16647797 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4897;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16647805 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16647871 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0054;AVGPOST=0.9992;RSQ=0.9442;ERATE=0.0003;THETA=0.0011;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16647940 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0308;AVGPOST=0.9996;RSQ=0.9947;ERATE=0.0003;THETA=0.0005;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 16648002 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.8331;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16648039 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0059;AVGPOST=0.9988;RSQ=0.9033;ERATE=0.0004;THETA=0.0013;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 16648050 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0198;AVGPOST=0.9998;RSQ=0.9943;ERATE=0.0003;THETA=0.0007;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 16648192 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5898;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16648194 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16648271 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.671;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6588;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16648390 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.838;LDAF=0.0052;AVGPOST=0.9985;RSQ=0.8742;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16648453 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0218;AVGPOST=0.9989;RSQ=0.9798;ERATE=0.0003;THETA=0.0009;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 16648454 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0172;AVGPOST=0.9982;RSQ=0.9601;ERATE=0.0004;THETA=0.0008;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 16648461 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.792;LDAF=0.0071;AVGPOST=0.9970;RSQ=0.8361;ERATE=0.0005;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 16648566 . T TA 1323 PASS INDEL;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0149;AVGPOST=0.9976;RSQ=0.9379;ERATE=0.0006;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 16648620 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0075;AVGPOST=0.9994;RSQ=0.9644;ERATE=0.0003;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 16648634 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.779;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8233;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16648655 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5198;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16648664 . C CA 210 PASS INDEL;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0050;AVGPOST=0.9953;RSQ=0.6043;ERATE=0.0008;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16648773 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.722;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.7186;ERATE=0.0005;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16648801 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.775;LDAF=0.0024;AVGPOST=0.9986;RSQ=0.7990;ERATE=0.0004;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16649308 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4759;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16649355 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8658;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16649372 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0049;AVGPOST=0.9993;RSQ=0.9480;ERATE=0.0003;THETA=0.0017;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16649524 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0306;AVGPOST=0.9999;RSQ=0.9987;ERATE=0.0003;THETA=0.0004;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 16649583 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.795;LDAF=0.0017;AVGPOST=0.9988;RSQ=0.7354;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16649653 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0072;AVGPOST=0.9994;RSQ=0.9583;ERATE=0.0004;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16649661 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0039;AVGPOST=0.9983;RSQ=0.8376;ERATE=0.0004;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16649684 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.968;LDAF=0.6687;AVGPOST=0.9730;RSQ=0.9580;ERATE=0.0044;THETA=0.0005;AC=1471;AN=2184 GT:DS:GL:BD 0.67353481 1
1 16649770 MERGED_DEL_2_1919 G <DEL> . . SV;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0005;CIEND=-72,81;CIPOS=-58,99;END=16657294;SOURCE=BreakDancer_16649805_16657293,GenomeStrip_16649770_ GT:DS:GL:BD 0.00045788 0
1 16649773 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0314;AVGPOST=0.9979;RSQ=0.9745;ERATE=0.0004;THETA=0.0006;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 16649806 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.924;LDAF=0.0259;AVGPOST=0.9929;RSQ=0.8990;ERATE=0.0009;THETA=0.0006;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 16649891 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.2827;AVGPOST=0.9956;RSQ=0.9917;ERATE=0.0006;THETA=0.0006;AC=619;AN=2184 GT:DS:GL:BD 0.28342491 0
1 16649899 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16649914 rs113243938 AAAAC A 674 PASS INDEL;BAVGPOST=0.995;BRSQ=0.826;LDAF=0.0194;AVGPOST=0.9921;RSQ=0.8319;ERATE=0.0019;THETA=0.0008;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 16649917 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0330;AVGPOST=0.9971;RSQ=0.9704;ERATE=0.0005;THETA=0.0004;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 16649959 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.9519;AVGPOST=0.9971;RSQ=0.9784;ERATE=0.0005;THETA=0.0007;AC=2079;AN=2184 GT:DS:GL:BD 0.95192307 1
1 16650015 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0031;AVGPOST=0.9994;RSQ=0.9024;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16650043 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0221;AVGPOST=0.9989;RSQ=0.9794;ERATE=0.0004;THETA=0.0010;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 16650070 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0085;AVGPOST=0.9981;RSQ=0.9099;ERATE=0.0004;THETA=0.0009;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 16650082 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.767;LDAF=0.0020;AVGPOST=0.9978;RSQ=0.5984;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16650088 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.682;LDAF=0.0027;AVGPOST=0.9955;RSQ=0.2877;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16650199 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.934;LDAF=0.0222;AVGPOST=0.9980;RSQ=0.9617;ERATE=0.0005;THETA=0.0005;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 16650217 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.793;LDAF=0.0109;AVGPOST=0.9946;RSQ=0.8042;ERATE=0.0005;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 16650280 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2826;AVGPOST=0.9952;RSQ=0.9900;ERATE=0.0010;THETA=0.0007;AC=617;AN=2184 GT:DS:GL:BD 0.28250915 0
1 16650350 . AAAG A 122 PASS INDEL;BAVGPOST=0.999;BRSQ=0.776;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7581;ERATE=0.0007;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16650391 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8316;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16650609 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.882;LDAF=0.0161;AVGPOST=0.9980;RSQ=0.9513;ERATE=0.0005;THETA=0.0008;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 16650622 . CAAATGA C 28014 PASS INDEL;BAVGPOST=0.985;BRSQ=0.956;LDAF=0.2074;AVGPOST=0.9857;RSQ=0.9670;ERATE=0.0033;THETA=0.0010;AC=454;AN=2184 GT:DS:GL:BD 0.20787546 0
1 16650653 . GATAAA G 353 PASS INDEL;BAVGPOST=0.999;BRSQ=0.702;LDAF=0.0030;AVGPOST=0.9961;RSQ=0.5631;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16650667 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0026;AVGPOST=0.9982;RSQ=0.7312;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16650805 . CAG C 261 PASS INDEL;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0017;AVGPOST=0.9986;RSQ=0.6567;ERATE=0.0004;THETA=0.0031;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16651034 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0030;AVGPOST=0.9975;RSQ=0.6663;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16651226 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0028;AVGPOST=0.9985;RSQ=0.7802;ERATE=0.0003;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16651238 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8118;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16651325 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0059;AVGPOST=0.9990;RSQ=0.9335;ERATE=0.0006;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 16651393 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0074;AVGPOST=0.9998;RSQ=0.9883;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 16651438 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16651558 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0015;AVGPOST=0.9981;RSQ=0.5101;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16651580 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.7071;AVGPOST=0.9947;RSQ=0.9901;ERATE=0.0004;THETA=0.0010;AC=1545;AN=2184 GT:DS:GL:BD 0.70741761 1
1 16651658 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0306;AVGPOST=0.9993;RSQ=0.9907;ERATE=0.0003;THETA=0.0009;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 16651857 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0076;AVGPOST=0.9992;RSQ=0.9529;ERATE=0.0004;THETA=0.0010;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 16651900 . CA C 798 PASS INDEL;BAVGPOST=0.973;BRSQ=0.615;LDAF=0.0566;AVGPOST=0.9370;RSQ=0.5403;ERATE=0.0121;THETA=0.0006;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 16652069 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6018;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16652116 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.8431;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16652161 . G GT 2592 PASS INDEL;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0220;AVGPOST=0.9987;RSQ=0.9743;ERATE=0.0004;THETA=0.0004;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 16652193 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0021;AVGPOST=0.9991;RSQ=0.8319;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16652219 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2085;AVGPOST=0.9968;RSQ=0.9917;ERATE=0.0005;THETA=0.0009;AC=455;AN=2184 GT:DS:GL:BD 0.20833333 0
1 16652224 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8394;ERATE=0.0004;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16652265 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0089;AVGPOST=0.9992;RSQ=0.9592;ERATE=0.0003;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 16652291 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.762;LDAF=0.0034;AVGPOST=0.9979;RSQ=0.7523;ERATE=0.0006;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16652306 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0297;AVGPOST=0.9994;RSQ=0.9913;ERATE=0.0003;THETA=0.0009;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 16652333 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.948;LDAF=0.2778;AVGPOST=0.9904;RSQ=0.9827;ERATE=0.0008;THETA=0.0003;AC=609;AN=2184 GT:DS:GL:BD 0.27884614 0
1 16652373 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.738;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.5496;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16652391 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6036;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16652421 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.812;LDAF=0.0104;AVGPOST=0.9978;RSQ=0.9029;ERATE=0.0004;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 16652484 . T TA 106 PASS INDEL;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4406;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16652533 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.768;LDAF=0.0569;AVGPOST=0.9784;RSQ=0.8515;ERATE=0.0005;THETA=0.0011;AC=133;AN=2184 GT:DS:GL:BD 0.06089744 0
1 16652535 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.704;LDAF=0.0101;AVGPOST=0.9912;RSQ=0.6951;ERATE=0.0011;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 16652629 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.637;LDAF=0.0026;AVGPOST=0.9955;RSQ=0.2644;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16652734 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0298;AVGPOST=0.9993;RSQ=0.9900;ERATE=0.0003;THETA=0.0006;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 16652740 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0026;AVGPOST=0.9983;RSQ=0.7364;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16652779 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.919;LDAF=0.0162;AVGPOST=0.9941;RSQ=0.8619;ERATE=0.0006;THETA=0.0025;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 16652894 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8692;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16652974 . TTC T 733 PASS INDEL;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0090;AVGPOST=0.9947;RSQ=0.7784;ERATE=0.0007;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 16653075 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.641;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6137;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16653113 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0505;AVGPOST=0.9994;RSQ=0.9940;ERATE=0.0003;THETA=0.0009;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 16653226 . AGGTGAT A 83 PASS INDEL;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0026;AVGPOST=0.9974;RSQ=0.6103;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16653227 . GGTGATGTTTTT G 407 PASS INDEL;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7873;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16653299 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.981;LDAF=0.0748;AVGPOST=0.9965;RSQ=0.9830;ERATE=0.0003;THETA=0.0005;AC=162;AN=2184 GT:DS:GL:BD 0.07417583 0
1 16653337 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0146;AVGPOST=0.9994;RSQ=0.9827;ERATE=0.0004;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 16653556 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9870;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16653633 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.733;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16653779 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0088;AVGPOST=0.9998;RSQ=0.9909;ERATE=0.0003;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 16653892 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5533;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16654037 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.720;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5487;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16654220 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5882;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16654288 . C CT 138 PASS INDEL;BAVGPOST=0.994;BRSQ=0.650;LDAF=0.0200;AVGPOST=0.9787;RSQ=0.5843;ERATE=0.0057;THETA=0.0010;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 16654314 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0035;AVGPOST=0.9938;RSQ=0.3519;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16654441 . C CT 22 PASS INDEL;BAVGPOST=1.000;BRSQ=0.746;LDAF=0.0021;AVGPOST=0.9980;RSQ=0.6325;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16654525 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8571;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16654611 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2097;AVGPOST=0.9986;RSQ=0.9966;ERATE=0.0004;THETA=0.0019;AC=457;AN=2184 GT:DS:GL:BD 0.20924908 0
1 16654654 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.777;LDAF=0.0021;AVGPOST=0.9989;RSQ=0.8008;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16654674 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.948;LDAF=0.4168;AVGPOST=0.9770;RSQ=0.9690;ERATE=0.0030;THETA=0.0005;AC=913;AN=2184 GT:DS:GL:BD 0.41804031 0
1 16654753 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9936;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16654793 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5871;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16654861 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0027;AVGPOST=0.9993;RSQ=0.8856;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16654944 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6343;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16654994 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0147;AVGPOST=0.9999;RSQ=0.9957;ERATE=0.0003;THETA=0.0005;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 16655005 . GAAGA G 21 PASS INDEL;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5770;ERATE=0.0005;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16655029 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16655109 . AAT A 17 PASS INDEL;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0015;AVGPOST=0.9985;RSQ=0.5548;ERATE=0.0006;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16655113 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0215;AVGPOST=0.9999;RSQ=0.9980;ERATE=0.0003;THETA=0.0029;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 16655211 . CAGA C 769 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0061;AVGPOST=0.9997;RSQ=0.9812;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 16655219 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0070;AVGPOST=0.9996;RSQ=0.9753;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16655255 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0504;AVGPOST=0.9996;RSQ=0.9962;ERATE=0.0003;THETA=0.0005;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 16655335 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0305;AVGPOST=0.9994;RSQ=0.9919;ERATE=0.0003;THETA=0.0006;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 16655367 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.681;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5441;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16655432 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0029;AVGPOST=0.9969;RSQ=0.5579;ERATE=0.0007;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16655465 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.977;LDAF=0.0316;AVGPOST=0.9983;RSQ=0.9804;ERATE=0.0004;THETA=0.0005;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 16655654 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.962;BRSQ=0.889;LDAF=0.2027;AVGPOST=0.9599;RSQ=0.9078;ERATE=0.0031;THETA=0.0008;AC=436;AN=2184 GT:DS:GL:BD 0.19963370 0
1 16655690 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6582;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16655735 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9411;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16655745 . GA G 147 PASS INDEL;BAVGPOST=1.000;BRSQ=0.739;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.4672;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16655812 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.642;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.5988;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16655854 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6941;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16655939 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.973;LDAF=0.0305;AVGPOST=0.9990;RSQ=0.9874;ERATE=0.0003;THETA=0.0007;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 16655945 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.956;LDAF=0.0077;AVGPOST=0.9984;RSQ=0.9141;ERATE=0.0004;THETA=0.0008;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16656002 . CAA C 416 PASS INDEL;BAVGPOST=0.997;BRSQ=0.726;LDAF=0.0060;AVGPOST=0.9986;RSQ=0.9013;ERATE=0.0004;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 16656023 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5963;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16656034 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.662;LDAF=0.0051;AVGPOST=0.9920;RSQ=0.3708;ERATE=0.0010;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16656080 . AAATC A 28 PASS INDEL;BAVGPOST=0.998;BRSQ=0.775;LDAF=0.0072;AVGPOST=0.9937;RSQ=0.6513;ERATE=0.0016;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 16656097 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8156;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16656173 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0074;AVGPOST=0.9980;RSQ=0.8972;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16656272 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.809;LDAF=0.0099;AVGPOST=0.9934;RSQ=0.7447;ERATE=0.0005;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16656444 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4534;ERATE=0.0003;THETA=0.0053;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16656518 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.970;LDAF=0.0359;AVGPOST=0.9984;RSQ=0.9796;ERATE=0.0003;THETA=0.0003;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 16656602 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0199;AVGPOST=0.9991;RSQ=0.9801;ERATE=0.0003;THETA=0.0008;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 16656621 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.942;LDAF=0.0184;AVGPOST=0.9971;RSQ=0.9311;ERATE=0.0004;THETA=0.0007;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 16656769 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.601;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8016;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16656853 rs36055269 C CA 17856 PASS INDEL;BAVGPOST=0.992;BRSQ=0.981;LDAF=0.2854;AVGPOST=0.9808;RSQ=0.9665;ERATE=0.0021;THETA=0.0003;AC=616;AN=2184 GT:DS:GL:BD 0.28205130 0
1 16656867 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0101;AVGPOST=0.9990;RSQ=0.9578;ERATE=0.0004;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 16656898 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.708;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6862;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16656935 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0083;AVGPOST=0.9979;RSQ=0.8975;ERATE=0.0005;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 16657175 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.726;LDAF=0.0035;AVGPOST=0.9967;RSQ=0.5985;ERATE=0.0007;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16657180 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0221;AVGPOST=0.9989;RSQ=0.9762;ERATE=0.0005;THETA=0.0002;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 16657208 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5522;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16657245 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.408;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4140;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16657296 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0018;AVGPOST=0.9979;RSQ=0.4768;ERATE=0.0008;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16657406 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0149;AVGPOST=0.9992;RSQ=0.9765;ERATE=0.0003;THETA=0.0007;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 16657487 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.948;LDAF=0.0214;AVGPOST=0.9955;RSQ=0.9207;ERATE=0.0008;THETA=0.0005;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 16657515 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.780;LDAF=0.0068;AVGPOST=0.9972;RSQ=0.8449;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 16657521 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.946;BRSQ=0.693;LDAF=0.1028;AVGPOST=0.9178;RSQ=0.6424;ERATE=0.0283;THETA=0.0008;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 16657546 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.583;LDAF=0.0052;AVGPOST=0.9926;RSQ=0.4107;ERATE=0.0010;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16657548 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0088;AVGPOST=0.9974;RSQ=0.8673;ERATE=0.0007;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 16657602 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0306;AVGPOST=0.9994;RSQ=0.9920;ERATE=0.0003;THETA=0.0004;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 16657622 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.988;LDAF=0.2120;AVGPOST=0.9828;RSQ=0.9627;ERATE=0.0024;THETA=0.0018;AC=457;AN=2184 GT:DS:GL:BD 0.20924908 0
1 16657636 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.7052;AVGPOST=0.9859;RSQ=0.9744;ERATE=0.0014;THETA=0.0009;AC=1542;AN=2184 GT:DS:GL:BD 0.70604396 1
1 16657674 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.928;LDAF=0.0267;AVGPOST=0.9931;RSQ=0.8922;ERATE=0.0010;THETA=0.0004;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 16657691 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.978;LDAF=0.0342;AVGPOST=0.9940;RSQ=0.9297;ERATE=0.0009;THETA=0.0004;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 16657716 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0125;AVGPOST=0.9926;RSQ=0.7652;ERATE=0.0008;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 16657764 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.613;LDAF=0.0228;AVGPOST=0.9784;RSQ=0.6124;ERATE=0.0026;THETA=0.0006;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 16657858 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.447;LDAF=0.0069;AVGPOST=0.9913;RSQ=0.4669;ERATE=0.0016;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16657897 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.481;LDAF=0.0069;AVGPOST=0.9966;RSQ=0.8030;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 16657953 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.602;LDAF=0.0023;AVGPOST=0.9970;RSQ=0.4819;ERATE=0.0007;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16657973 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1595;AVGPOST=0.9979;RSQ=0.9935;ERATE=0.0004;THETA=0.0003;AC=348;AN=2184 GT:DS:GL:BD 0.15934066 0
1 16658012 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0205;AVGPOST=0.9986;RSQ=0.9689;ERATE=0.0006;THETA=0.0006;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 16658085 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.937;LDAF=0.2765;AVGPOST=0.9839;RSQ=0.9709;ERATE=0.0013;THETA=0.0003;AC=606;AN=2184 GT:DS:GL:BD 0.27747253 0
1 16658120 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0023;AVGPOST=0.9968;RSQ=0.5141;ERATE=0.0005;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16658191 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0150;AVGPOST=0.9989;RSQ=0.9691;ERATE=0.0004;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 16658237 . AAAAT A 41 PASS INDEL;BAVGPOST=0.990;BRSQ=0.338;LDAF=0.0466;AVGPOST=0.9366;RSQ=0.4527;ERATE=0.0051;THETA=0.0006;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 16658300 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.728;LDAF=0.0022;AVGPOST=0.9968;RSQ=0.3923;ERATE=0.0007;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16658329 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.704;LDAF=0.0022;AVGPOST=0.9971;RSQ=0.5355;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16658601 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9048;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16658609 . ATAGT A 373 PASS INDEL;BAVGPOST=0.999;BRSQ=0.776;LDAF=0.0050;AVGPOST=0.9957;RSQ=0.6608;ERATE=0.0008;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16658638 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0307;AVGPOST=0.9997;RSQ=0.9962;ERATE=0.0003;THETA=0.0005;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 16658814 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0036;AVGPOST=0.9989;RSQ=0.8508;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16658845 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4186;AVGPOST=0.9961;RSQ=0.9942;ERATE=0.0004;THETA=0.0004;AC=914;AN=2184 GT:DS:GL:BD 0.41849816 0
1 16658867 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5266;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16658879 . C CA 1059 PASS INDEL;BAVGPOST=0.993;BRSQ=0.701;LDAF=0.0185;AVGPOST=0.9862;RSQ=0.7211;ERATE=0.0016;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 16659060 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.720;LDAF=0.0198;AVGPOST=0.9902;RSQ=0.7980;ERATE=0.0010;THETA=0.0005;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 16659100 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0216;AVGPOST=0.9995;RSQ=0.9882;ERATE=0.0003;THETA=0.0005;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 16659113 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.2099;AVGPOST=0.9973;RSQ=0.9931;ERATE=0.0007;THETA=0.0003;AC=458;AN=2184 GT:DS:GL:BD 0.20970696 0
1 16659121 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0144;AVGPOST=0.9985;RSQ=0.9591;ERATE=0.0005;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 16659277 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4489;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16659334 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0016;AVGPOST=0.9982;RSQ=0.5683;ERATE=0.0005;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16659338 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7267;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16659428 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8116;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16659438 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0307;AVGPOST=0.9996;RSQ=0.9950;ERATE=0.0004;THETA=0.0010;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 16659444 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6526;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16659465 . CTTG C 141 PASS INDEL;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5491;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16659504 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0075;AVGPOST=0.9991;RSQ=0.9489;ERATE=0.0003;THETA=0.0008;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16659614 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9774;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16659669 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0306;AVGPOST=0.9999;RSQ=0.9987;ERATE=0.0003;THETA=0.0008;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 16659726 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0215;AVGPOST=0.9999;RSQ=0.9980;ERATE=0.0003;THETA=0.0007;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 16659815 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9499;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16659927 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0261;AVGPOST=0.9908;RSQ=0.8751;ERATE=0.0010;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 16659952 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.947;BRSQ=0.659;LDAF=0.1124;AVGPOST=0.8954;RSQ=0.6026;ERATE=0.0183;THETA=0.0012;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 16660005 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.493;LDAF=0.0016;AVGPOST=0.9980;RSQ=0.4984;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16660052 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5119;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16660074 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2834;AVGPOST=0.9982;RSQ=0.9963;ERATE=0.0004;THETA=0.0003;AC=619;AN=2184 GT:DS:GL:BD 0.28342491 0
1 16660399 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0019;AVGPOST=0.9991;RSQ=0.8222;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16660439 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6282;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16660466 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0022;AVGPOST=0.9970;RSQ=0.4888;ERATE=0.0005;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16660524 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0028;AVGPOST=0.9991;RSQ=0.8764;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16660651 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=0.9980;RSQ=0.9181;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16660991 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6636;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16661061 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6694;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16661282 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0020;AVGPOST=0.9993;RSQ=0.8379;ERATE=0.0005;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16661314 . CA C 61 PASS INDEL;BAVGPOST=0.999;BRSQ=0.605;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5183;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16661427 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.940;LDAF=0.1106;AVGPOST=0.9908;RSQ=0.9666;ERATE=0.0004;THETA=0.0004;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 16661497 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9988;RSQ=0.9331;ERATE=0.0004;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16661829 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0048;AVGPOST=0.9968;RSQ=0.7618;ERATE=0.0004;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16661930 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4198;AVGPOST=0.9965;RSQ=0.9955;ERATE=0.0003;THETA=0.0010;AC=913;AN=2184 GT:DS:GL:BD 0.41804031 0
1 16661956 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6721;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16662223 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0032;AVGPOST=0.9986;RSQ=0.7955;ERATE=0.0005;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16662276 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.553;LDAF=0.0051;AVGPOST=0.9926;RSQ=0.3979;ERATE=0.0009;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16662281 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0042;AVGPOST=0.9979;RSQ=0.7786;ERATE=0.0006;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16662536 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.959;LDAF=0.0221;AVGPOST=0.9988;RSQ=0.9724;ERATE=0.0004;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 16662608 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.776;LDAF=0.0026;AVGPOST=0.9983;RSQ=0.7155;ERATE=0.0007;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16662688 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.6973;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16662706 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.5428;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16662723 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6169;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16662781 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8111;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16662798 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0071;AVGPOST=0.9995;RSQ=0.9662;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16662832 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.2834;AVGPOST=0.9984;RSQ=0.9971;ERATE=0.0004;THETA=0.0007;AC=619;AN=2184 GT:DS:GL:BD 0.28342491 0
1 16662950 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0088;AVGPOST=0.9980;RSQ=0.9061;ERATE=0.0007;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 16663136 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0053;AVGPOST=0.9982;RSQ=0.8571;ERATE=0.0006;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16663139 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0226;AVGPOST=0.9981;RSQ=0.9639;ERATE=0.0005;THETA=0.0004;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 16663288 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0229;AVGPOST=0.9972;RSQ=0.9481;ERATE=0.0004;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 16663308 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.704;LDAF=0.0036;AVGPOST=0.9955;RSQ=0.5129;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16663375 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0073;AVGPOST=0.9990;RSQ=0.9389;ERATE=0.0004;THETA=0.0008;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16663403 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0027;AVGPOST=0.9974;RSQ=0.6577;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16663436 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.974;LDAF=0.2597;AVGPOST=0.9936;RSQ=0.9867;ERATE=0.0011;THETA=0.0004;AC=569;AN=2184 GT:DS:GL:BD 0.26053113 0
1 16663633 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16663715 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.2837;AVGPOST=0.9977;RSQ=0.9960;ERATE=0.0004;THETA=0.0006;AC=619;AN=2184 GT:DS:GL:BD 0.28342491 0
1 16664019 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.6223;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16664099 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0039;AVGPOST=0.9987;RSQ=0.8365;ERATE=0.0005;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16664100 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.2838;AVGPOST=0.9964;RSQ=0.9939;ERATE=0.0007;THETA=0.0003;AC=618;AN=2184 GT:DS:GL:BD 0.28296703 0
1 16664242 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0322;AVGPOST=0.9969;RSQ=0.9698;ERATE=0.0005;THETA=0.0043;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 16664271 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0098;AVGPOST=0.9954;RSQ=0.8470;ERATE=0.0005;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 16664335 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.397;LDAF=0.0024;AVGPOST=0.9967;RSQ=0.4822;ERATE=0.0006;THETA=0.0019;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16664353 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0075;AVGPOST=0.9988;RSQ=0.9306;ERATE=0.0004;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16664373 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.964;LDAF=0.1588;AVGPOST=0.9875;RSQ=0.9627;ERATE=0.0016;THETA=0.0004;AC=346;AN=2184 GT:DS:GL:BD 0.15842491 0
1 16664477 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.812;LDAF=0.0094;AVGPOST=0.9971;RSQ=0.8693;ERATE=0.0006;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 16664521 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0170;AVGPOST=0.9952;RSQ=0.8868;ERATE=0.0005;THETA=0.0007;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 16664742 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.689;LDAF=0.0474;AVGPOST=0.9606;RSQ=0.6707;ERATE=0.0081;THETA=0.0004;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 16664755 . C CA 6617 PASS INDEL;BAVGPOST=0.987;BRSQ=0.959;LDAF=0.1598;AVGPOST=0.9910;RSQ=0.9730;ERATE=0.0014;THETA=0.0005;AC=344;AN=2184 GT:DS:GL:BD 0.15750916 0
1 16664891 . CATCTT C 908 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0049;AVGPOST=0.9993;RSQ=0.9401;ERATE=0.0005;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16664894 . C CTTGTCTTG 1766 PASS INDEL;BAVGPOST=0.999;BRSQ=0.898;LDAF=0.0070;AVGPOST=0.9994;RSQ=0.9592;ERATE=0.0004;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16665187 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0080;AVGPOST=0.9986;RSQ=0.9397;ERATE=0.0003;THETA=0.0007;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 16665188 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8213;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16665215 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16665248 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16665264 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5682;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16665270 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.710;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.3984;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16665284 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7085;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16665363 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.703;LDAF=0.0029;AVGPOST=0.9958;RSQ=0.4316;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16665372 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.825;LDAF=0.0053;AVGPOST=0.9991;RSQ=0.9365;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16665375 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.705;LDAF=0.0091;AVGPOST=0.9863;RSQ=0.4691;ERATE=0.0008;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16665488 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.802;LDAF=0.0078;AVGPOST=0.9963;RSQ=0.8280;ERATE=0.0003;THETA=0.0010;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16665584 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0117;AVGPOST=0.9994;RSQ=0.9773;ERATE=0.0004;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 16665608 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4185;AVGPOST=0.9967;RSQ=0.9950;ERATE=0.0004;THETA=0.0004;AC=914;AN=2184 GT:DS:GL:BD 0.41849816 0
1 16665770 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6798;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16665836 rs111986530 TCTCA T 2035 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0153;AVGPOST=0.9963;RSQ=0.9083;ERATE=0.0005;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 16665902 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.756;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5706;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16666053 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.828;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.7865;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16666114 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0030;AVGPOST=0.9977;RSQ=0.7339;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16666174 rs111400054 T TG 37627 PASS INDEL;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2859;AVGPOST=0.9925;RSQ=0.9858;ERATE=0.0021;THETA=0.0007;AC=619;AN=2184 GT:DS:GL:BD 0.28342491 0
1 16666271 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0218;AVGPOST=0.9991;RSQ=0.9860;ERATE=0.0003;THETA=0.0006;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 16666283 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2093;AVGPOST=0.9995;RSQ=0.9986;ERATE=0.0003;THETA=0.0004;AC=457;AN=2184 GT:DS:GL:BD 0.20924908 0
1 16666416 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0140;AVGPOST=0.9995;RSQ=0.9863;ERATE=0.0003;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 16666425 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6437;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16666429 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.963;LDAF=0.9492;AVGPOST=0.9914;RSQ=0.9381;ERATE=0.0005;THETA=0.0002;AC=2078;AN=2184 GT:DS:GL:BD 0.95146519 1
1 16666517 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0222;AVGPOST=0.9985;RSQ=0.9697;ERATE=0.0005;THETA=0.0006;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 16666533 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.461;LDAF=0.0017;AVGPOST=0.9976;RSQ=0.3716;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16666544 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0321;AVGPOST=0.9962;RSQ=0.9537;ERATE=0.0009;THETA=0.0007;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 16666558 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.718;LDAF=0.0031;AVGPOST=0.9962;RSQ=0.5038;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16666746 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2104;AVGPOST=0.9979;RSQ=0.9950;ERATE=0.0005;THETA=0.0007;AC=459;AN=2184 GT:DS:GL:BD 0.21016483 0
1 16666895 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.659;LDAF=0.0088;AVGPOST=0.9915;RSQ=0.6019;ERATE=0.0007;THETA=0.0013;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 16666956 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.960;BRSQ=0.922;LDAF=0.6803;AVGPOST=0.9669;RSQ=0.9460;ERATE=0.0025;THETA=0.0008;AC=1496;AN=2184 GT:DS:GL:BD 0.68498170 1
1 16667179 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.976;LDAF=0.0310;AVGPOST=0.9989;RSQ=0.9863;ERATE=0.0004;THETA=0.0005;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 16667232 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16667294 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.844;LDAF=0.0022;AVGPOST=0.9995;RSQ=0.9021;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16667302 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.592;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16667321 . C CA 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16667516 rs113458204 ACT A 948 PASS INDEL;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0079;AVGPOST=0.9993;RSQ=0.9684;ERATE=0.0003;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 16667541 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2809;AVGPOST=0.9982;RSQ=0.9961;ERATE=0.0005;THETA=0.0004;AC=613;AN=2184 GT:DS:GL:BD 0.28067765 0
1 16667553 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9998;RSQ=0.9874;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 16667619 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16667628 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6789;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16667742 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.850;LDAF=0.0117;AVGPOST=0.9956;RSQ=0.8659;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 16667967 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.878;LDAF=0.0156;AVGPOST=0.9971;RSQ=0.9234;ERATE=0.0005;THETA=0.0006;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 16668040 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0074;AVGPOST=0.9978;RSQ=0.8638;ERATE=0.0005;THETA=0.0008;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 16668052 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2614;AVGPOST=0.9967;RSQ=0.9930;ERATE=0.0006;THETA=0.0003;AC=572;AN=2184 GT:DS:GL:BD 0.26190478 0
1 16668163 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0032;AVGPOST=0.9987;RSQ=0.8198;ERATE=0.0004;THETA=0.0013;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16668240 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.636;LDAF=0.0341;AVGPOST=0.9684;RSQ=0.6307;ERATE=0.0044;THETA=0.0004;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 16668262 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.680;LDAF=0.0042;AVGPOST=0.9949;RSQ=0.4999;ERATE=0.0005;THETA=0.0012;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16668287 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.707;LDAF=0.0111;AVGPOST=0.9915;RSQ=0.7311;ERATE=0.0004;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 16668334 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.477;LDAF=0.0047;AVGPOST=0.9916;RSQ=0.3047;ERATE=0.0011;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16668335 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0095;AVGPOST=0.9973;RSQ=0.8900;ERATE=0.0006;THETA=0.0012;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 16668371 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.963;BRSQ=0.929;LDAF=0.6728;AVGPOST=0.9463;RSQ=0.9088;ERATE=0.0071;THETA=0.0026;AC=1487;AN=2184 GT:DS:GL:BD 0.68086082 1
1 16668406 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0026;AVGPOST=0.9971;RSQ=0.5441;ERATE=0.0007;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16668412 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.796;LDAF=0.0042;AVGPOST=0.9989;RSQ=0.8903;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16668423 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.5216;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16668437 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0057;AVGPOST=0.9983;RSQ=0.8916;ERATE=0.0004;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 16668468 rs56035222 A AG 1134 PASS INDEL;BAVGPOST=0.998;BRSQ=0.965;LDAF=0.0306;AVGPOST=0.9979;RSQ=0.9715;ERATE=0.0004;THETA=0.0005;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 16668469 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.951;LDAF=0.0348;AVGPOST=0.9931;RSQ=0.9257;ERATE=0.0012;THETA=0.0005;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 16668615 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5081;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16668617 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.852;LDAF=0.0078;AVGPOST=0.9976;RSQ=0.8735;ERATE=0.0007;THETA=0.0011;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16668667 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0030;AVGPOST=0.9993;RSQ=0.8887;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16668768 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.896;LDAF=0.0162;AVGPOST=0.9963;RSQ=0.9147;ERATE=0.0004;THETA=0.0007;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 16668772 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.697;LDAF=0.0051;AVGPOST=0.9920;RSQ=0.4286;ERATE=0.0008;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16668793 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.904;LDAF=0.0179;AVGPOST=0.9931;RSQ=0.8367;ERATE=0.0010;THETA=0.0009;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 16668853 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0092;AVGPOST=0.9980;RSQ=0.9319;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 16668933 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.982;LDAF=0.1511;AVGPOST=0.9970;RSQ=0.9916;ERATE=0.0003;THETA=0.0006;AC=333;AN=2184 GT:DS:GL:BD 0.15247253 0
1 16669026 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0198;AVGPOST=0.9979;RSQ=0.9602;ERATE=0.0003;THETA=0.0005;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 16669093 . AG A 5456 PASS INDEL;BAVGPOST=0.990;BRSQ=0.967;LDAF=0.1584;AVGPOST=0.9966;RSQ=0.9890;ERATE=0.0005;THETA=0.0003;AC=347;AN=2184 GT:DS:GL:BD 0.15888278 0
1 16669094 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.928;LDAF=0.1758;AVGPOST=0.9555;RSQ=0.8855;ERATE=0.0108;THETA=0.0003;AC=362;AN=2184 GT:DS:GL:BD 0.16575092 0
1 16669132 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16669351 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0084;AVGPOST=0.9993;RSQ=0.9687;ERATE=0.0003;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 16669371 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6434;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16669403 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.647;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7457;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16669562 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0035;AVGPOST=0.9965;RSQ=0.6476;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16669681 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0096;AVGPOST=0.9985;RSQ=0.9386;ERATE=0.0003;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 16669765 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0063;AVGPOST=0.9993;RSQ=0.9514;ERATE=0.0005;THETA=0.0016;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 16669795 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.728;LDAF=0.0015;AVGPOST=0.9977;RSQ=0.3669;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16669830 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0017;AVGPOST=0.9988;RSQ=0.6887;ERATE=0.0006;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16669864 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0307;AVGPOST=0.9996;RSQ=0.9950;ERATE=0.0003;THETA=0.0014;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 16669884 rs56298793 C CA 16431 PASS INDEL;BAVGPOST=0.990;BRSQ=0.973;LDAF=0.2090;AVGPOST=0.9960;RSQ=0.9901;ERATE=0.0008;THETA=0.0003;AC=456;AN=2184 GT:DS:GL:BD 0.20879121 0
1 16669891 . A AG 316 PASS INDEL;BAVGPOST=0.809;BRSQ=0.327;LDAF=0.1898;AVGPOST=0.7836;RSQ=0.4542;ERATE=0.0182;THETA=0.0005;AC=282;AN=2184 GT:DS:GL:BD 0.12912089 0
1 16670055 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0513;AVGPOST=0.9993;RSQ=0.9933;ERATE=0.0003;THETA=0.0005;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 16670066 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9734;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16670100 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.747;LDAF=0.0037;AVGPOST=0.9986;RSQ=0.8408;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16670273 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.715;LDAF=0.0106;AVGPOST=0.9918;RSQ=0.6892;ERATE=0.0004;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 16670427 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.614;LDAF=0.0058;AVGPOST=0.9961;RSQ=0.7337;ERATE=0.0007;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16670432 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.567;LDAF=0.0032;AVGPOST=0.9978;RSQ=0.7364;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16670459 . A AC 64 PASS INDEL;BAVGPOST=0.998;BRSQ=0.490;LDAF=0.0062;AVGPOST=0.9936;RSQ=0.6097;ERATE=0.0008;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16670500 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.973;LDAF=0.4206;AVGPOST=0.9941;RSQ=0.9915;ERATE=0.0004;THETA=0.0006;AC=921;AN=2184 GT:DS:GL:BD 0.42170331 0
1 16670553 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8126;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16670569 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0048;AVGPOST=0.9971;RSQ=0.7740;ERATE=0.0005;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16670728 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.957;BRSQ=0.796;LDAF=0.9088;AVGPOST=0.9534;RSQ=0.8019;ERATE=0.0058;THETA=0.0006;AC=2006;AN=2184 GT:DS:GL:BD 0.91849816 1
1 16670920 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.803;LDAF=0.0055;AVGPOST=0.9973;RSQ=0.7872;ERATE=0.0007;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16671171 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16671218 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2094;AVGPOST=0.9982;RSQ=0.9957;ERATE=0.0004;THETA=0.0005;AC=458;AN=2184 GT:DS:GL:BD 0.20970696 0
1 16671246 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0308;AVGPOST=0.9996;RSQ=0.9944;ERATE=0.0003;THETA=0.0005;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 16671281 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7905;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16671327 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0078;AVGPOST=0.9981;RSQ=0.9117;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16671424 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.557;LDAF=0.0028;AVGPOST=0.9971;RSQ=0.5900;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16671631 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0022;AVGPOST=0.9971;RSQ=0.5118;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16671850 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.784;LDAF=0.0030;AVGPOST=0.9978;RSQ=0.6706;ERATE=0.0005;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16671955 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.747;LDAF=0.0040;AVGPOST=0.9975;RSQ=0.7679;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16672111 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.640;LDAF=0.0030;AVGPOST=0.9969;RSQ=0.5580;ERATE=0.0006;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16672143 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.741;LDAF=0.0021;AVGPOST=0.9973;RSQ=0.4389;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16672328 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0157;AVGPOST=0.9970;RSQ=0.9300;ERATE=0.0005;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 16672438 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4189;AVGPOST=0.9985;RSQ=0.9978;ERATE=0.0004;THETA=0.0004;AC=914;AN=2184 GT:DS:GL:BD 0.41849816 0
1 16672473 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0003;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16672559 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4235;AVGPOST=0.9976;RSQ=0.9968;ERATE=0.0007;THETA=0.0004;AC=926;AN=2184 GT:DS:GL:BD 0.42399266 0
1 16672609 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0220;AVGPOST=0.9990;RSQ=0.9812;ERATE=0.0004;THETA=0.0005;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 16672840 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2807;AVGPOST=0.9989;RSQ=0.9976;ERATE=0.0005;THETA=0.0005;AC=613;AN=2184 GT:DS:GL:BD 0.28067765 0
1 16672854 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6279;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16672881 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0513;AVGPOST=0.9991;RSQ=0.9917;ERATE=0.0004;THETA=0.0012;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 16672896 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.367;LDAF=0.9837;AVGPOST=0.9816;RSQ=0.5534;ERATE=0.0009;THETA=0.0005;AC=2162;AN=2184 GT:DS:GL:BD 0.98992676 1
1 16673378 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0049;AVGPOST=0.9993;RSQ=0.9452;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16673465 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.607;LDAF=0.0039;AVGPOST=0.9932;RSQ=0.3284;ERATE=0.0008;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16673495 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5402;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16673635 . CTG C 273 PASS INDEL;BAVGPOST=0.981;BRSQ=0.676;LDAF=0.0476;AVGPOST=0.9493;RSQ=0.5339;ERATE=0.0218;THETA=0.0004;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 16673651 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2100;AVGPOST=0.9989;RSQ=0.9976;ERATE=0.0005;THETA=0.0003;AC=458;AN=2184 GT:DS:GL:BD 0.20970696 0
1 16673839 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.651;LDAF=0.0129;AVGPOST=0.9856;RSQ=0.5892;ERATE=0.0020;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 16673840 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0088;AVGPOST=0.9998;RSQ=0.9909;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 16673890 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.818;LDAF=0.0106;AVGPOST=0.9952;RSQ=0.8354;ERATE=0.0003;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 16674092 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.736;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16674099 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2098;AVGPOST=0.9989;RSQ=0.9971;ERATE=0.0004;THETA=0.0007;AC=458;AN=2184 GT:DS:GL:BD 0.20970696 0
1 16674377 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.967;BRSQ=0.935;LDAF=0.6943;AVGPOST=0.9729;RSQ=0.9531;ERATE=0.0018;THETA=0.0003;AC=1528;AN=2184 GT:DS:GL:BD 0.69963372 1
1 16674401 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.393;LDAF=0.0025;AVGPOST=0.9959;RSQ=0.3029;ERATE=0.0010;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16674595 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7417;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16674820 rs35452975 AG A 210 PASS INDEL;BAVGPOST=0.995;BRSQ=0.814;LDAF=0.0141;AVGPOST=0.9972;RSQ=0.9237;ERATE=0.0005;THETA=0.0008;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 16674823 . T TAC 1133 PASS INDEL;BAVGPOST=0.995;BRSQ=0.802;LDAF=0.0158;AVGPOST=0.9972;RSQ=0.9364;ERATE=0.0004;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 16674885 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6242;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16674917 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7053;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16674921 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.809;LDAF=0.0032;AVGPOST=0.9973;RSQ=0.6376;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16674934 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5207;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16675022 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.981;LDAF=0.2079;AVGPOST=0.9964;RSQ=0.9910;ERATE=0.0007;THETA=0.0005;AC=454;AN=2184 GT:DS:GL:BD 0.20787546 0
1 16675089 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.559;LDAF=0.0035;AVGPOST=0.9961;RSQ=0.5546;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16675110 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.677;LDAF=0.0059;AVGPOST=0.9960;RSQ=0.7250;ERATE=0.0006;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16675127 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9107;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16675242 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.871;LDAF=0.0077;AVGPOST=0.9966;RSQ=0.8373;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16675317 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.758;LDAF=0.0068;AVGPOST=0.9955;RSQ=0.7175;ERATE=0.0011;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 16675338 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0089;AVGPOST=0.9996;RSQ=0.9820;ERATE=0.0004;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 16675603 . CA C 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.765;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4613;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16675627 rs34802671 GA G 21712 PASS INDEL;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2084;AVGPOST=0.9959;RSQ=0.9894;ERATE=0.0010;THETA=0.0003;AC=453;AN=2184 GT:DS:GL:BD 0.20741758 0
1 16675648 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.925;LDAF=0.0130;AVGPOST=0.9963;RSQ=0.9027;ERATE=0.0003;THETA=0.0007;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 16675720 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0066;AVGPOST=0.9995;RSQ=0.9655;ERATE=0.0003;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 16675837 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0020;AVGPOST=0.9970;RSQ=0.5147;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16675875 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.0060;AVGPOST=0.9973;RSQ=0.8626;ERATE=0.0003;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16675985 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8474;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16675990 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0087;AVGPOST=1.0000;RSQ=0.9977;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 16676050 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.634;LDAF=0.0037;AVGPOST=0.9971;RSQ=0.7014;ERATE=0.0005;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16676078 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1593;AVGPOST=0.9971;RSQ=0.9911;ERATE=0.0006;THETA=0.0004;AC=349;AN=2184 GT:DS:GL:BD 0.15979853 0
1 16676082 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.582;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5650;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16676141 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0070;AVGPOST=0.9996;RSQ=0.9753;ERATE=0.0003;THETA=0.0010;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16676237 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0260;AVGPOST=0.9987;RSQ=0.9775;ERATE=0.0006;THETA=0.0004;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 16676333 . CAA C 199 PASS INDEL;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5869;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16676380 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2798;AVGPOST=0.9979;RSQ=0.9967;ERATE=0.0005;THETA=0.0003;AC=612;AN=2184 GT:DS:GL:BD 0.28021979 0
1 16676410 . TA T 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5234;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16676444 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.977;LDAF=0.0766;AVGPOST=0.9983;RSQ=0.9909;ERATE=0.0003;THETA=0.0003;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 16676758 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5170;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16676808 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0106;AVGPOST=0.9992;RSQ=0.9659;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 16676827 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16676834 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16676914 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6339;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16677039 rs57703992 TC T 37959 PASS INDEL;BAVGPOST=0.990;BRSQ=0.918;LDAF=0.9352;AVGPOST=0.9679;RSQ=0.8191;ERATE=0.0031;THETA=0.0004;AC=2066;AN=2184 GT:DS:GL:BD 0.94597071 1
1 16677156 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.559;LDAF=0.0091;AVGPOST=0.9912;RSQ=0.6487;ERATE=0.0008;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 16677246 . A AG 66 PASS INDEL;BAVGPOST=0.991;BRSQ=0.650;LDAF=0.0163;AVGPOST=0.9882;RSQ=0.7077;ERATE=0.0009;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 16677260 . G GA 210 PASS INDEL;BAVGPOST=0.990;BRSQ=0.646;LDAF=0.0144;AVGPOST=0.9897;RSQ=0.7193;ERATE=0.0008;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 16677315 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6526;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16677365 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5181;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16677455 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.5890;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16677527 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0066;AVGPOST=0.9996;RSQ=0.9769;ERATE=0.0003;THETA=0.0008;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 16677556 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16677585 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16677667 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0028;AVGPOST=0.9981;RSQ=0.7503;ERATE=0.0005;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16677693 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6624;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16677766 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8625;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16677784 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9451;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16677827 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7702;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16677837 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7836;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16677858 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7122;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16678000 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16678054 . C CA 90 PASS INDEL;BAVGPOST=0.999;BRSQ=0.549;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.7009;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16678242 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.7958;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16678244 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9936;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16678315 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0030;AVGPOST=0.9986;RSQ=0.8452;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16678564 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2814;AVGPOST=0.9965;RSQ=0.9928;ERATE=0.0006;THETA=0.0004;AC=615;AN=2184 GT:DS:GL:BD 0.28159341 0
1 16678581 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.963;LDAF=0.1593;AVGPOST=0.9869;RSQ=0.9661;ERATE=0.0008;THETA=0.0008;AC=347;AN=2184 GT:DS:GL:BD 0.15888278 0
1 16678944 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.334;LDAF=0.0089;AVGPOST=0.9892;RSQ=0.5051;ERATE=0.0012;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 16679055 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.935;LDAF=0.0350;AVGPOST=0.9915;RSQ=0.9030;ERATE=0.0011;THETA=0.0005;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 16679075 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.986;LDAF=0.2805;AVGPOST=0.9868;RSQ=0.9762;ERATE=0.0015;THETA=0.0005;AC=612;AN=2184 GT:DS:GL:BD 0.28021979 0
1 16679121 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.695;LDAF=0.0040;AVGPOST=0.9932;RSQ=0.3865;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16679128 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.4199;AVGPOST=0.9884;RSQ=0.9832;ERATE=0.0007;THETA=0.0003;AC=914;AN=2184 GT:DS:GL:BD 0.41849816 0
1 16679214 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.720;LDAF=0.0017;AVGPOST=0.9976;RSQ=0.4666;ERATE=0.0006;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16679253 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.7246;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16679424 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5540;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16679520 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5229;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16679713 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5149;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16679758 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0155;AVGPOST=0.9982;RSQ=0.9469;ERATE=0.0005;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 16679847 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2805;AVGPOST=0.9995;RSQ=0.9988;ERATE=0.0003;THETA=0.0027;AC=613;AN=2184 GT:DS:GL:BD 0.28067765 0
1 16679947 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0270;AVGPOST=0.9987;RSQ=0.9814;ERATE=0.0003;THETA=0.0006;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 16680002 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.888;LDAF=0.0087;AVGPOST=0.9975;RSQ=0.8764;ERATE=0.0003;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 16680007 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.636;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8538;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16680018 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6466;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16680022 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6409;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16680119 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0082;AVGPOST=0.9984;RSQ=0.9350;ERATE=0.0004;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 16680121 . A AG 581 PASS INDEL;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0078;AVGPOST=0.9990;RSQ=0.9456;ERATE=0.0003;THETA=0.0014;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 16680435 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.748;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5293;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16680455 . TTTTA T 92 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8197;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16680569 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.620;LDAF=0.0024;AVGPOST=0.9963;RSQ=0.3508;ERATE=0.0006;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16680608 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.862;LDAF=0.0159;AVGPOST=0.9966;RSQ=0.9142;ERATE=0.0006;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 16680613 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.975;LDAF=0.0309;AVGPOST=0.9980;RSQ=0.9782;ERATE=0.0004;THETA=0.0005;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 16680681 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0306;AVGPOST=0.9991;RSQ=0.9881;ERATE=0.0004;THETA=0.0008;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 16680691 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.724;LDAF=0.0051;AVGPOST=0.9968;RSQ=0.7613;ERATE=0.0004;THETA=0.0018;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16680735 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.2923;AVGPOST=0.9831;RSQ=0.9699;ERATE=0.0038;THETA=0.0011;AC=636;AN=2184 GT:DS:GL:BD 0.29120880 0
1 16680749 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.666;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4490;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16680754 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.521;LDAF=0.0019;AVGPOST=0.9971;RSQ=0.3642;ERATE=0.0008;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16680804 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.793;LDAF=0.0030;AVGPOST=0.9991;RSQ=0.8623;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16680934 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0526;AVGPOST=0.9978;RSQ=0.9813;ERATE=0.0005;THETA=0.0007;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 16680980 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.418;LDAF=0.0032;AVGPOST=0.9974;RSQ=0.6363;ERATE=0.0006;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16681046 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.684;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.3967;ERATE=0.0006;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16681090 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0512;AVGPOST=0.9994;RSQ=0.9941;ERATE=0.0003;THETA=0.0007;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 16681130 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0105;AVGPOST=0.9997;RSQ=0.9855;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 16681154 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0302;AVGPOST=0.9998;RSQ=0.9968;ERATE=0.0003;THETA=0.0006;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 16681229 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9429;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16681453 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0148;AVGPOST=0.9997;RSQ=0.9915;ERATE=0.0003;THETA=0.0008;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 16681459 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0304;AVGPOST=0.9994;RSQ=0.9931;ERATE=0.0003;THETA=0.0007;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 16681492 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2200;AVGPOST=0.9984;RSQ=0.9958;ERATE=0.0005;THETA=0.0004;AC=480;AN=2184 GT:DS:GL:BD 0.21978022 0
1 16681538 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.937;LDAF=0.0130;AVGPOST=0.9981;RSQ=0.9397;ERATE=0.0004;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 16681641 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.687;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.6791;ERATE=0.0008;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16681706 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0031;AVGPOST=0.9990;RSQ=0.8799;ERATE=0.0003;THETA=0.0015;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16681734 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5687;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16681795 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0174;AVGPOST=0.9990;RSQ=0.9750;ERATE=0.0004;THETA=0.0008;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 16681809 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6150;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16681813 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.633;LDAF=0.0044;AVGPOST=0.9937;RSQ=0.4030;ERATE=0.0009;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16681852 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0082;AVGPOST=0.9977;RSQ=0.8785;ERATE=0.0006;THETA=0.0009;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 16681857 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.960;LDAF=0.0330;AVGPOST=0.9977;RSQ=0.9724;ERATE=0.0005;THETA=0.0005;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 16681949 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.577;LDAF=0.0059;AVGPOST=0.9955;RSQ=0.6907;ERATE=0.0007;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16681980 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.984;LDAF=0.1824;AVGPOST=0.9967;RSQ=0.9900;ERATE=0.0008;THETA=0.0002;AC=398;AN=2184 GT:DS:GL:BD 0.18223444 0
1 16682128 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2200;AVGPOST=0.9982;RSQ=0.9956;ERATE=0.0005;THETA=0.0006;AC=481;AN=2184 GT:DS:GL:BD 0.22023809 0
1 16682242 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.604;LDAF=0.0023;AVGPOST=0.9984;RSQ=0.7212;ERATE=0.0006;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16682276 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4390;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16682334 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.760;LDAF=0.0050;AVGPOST=0.9941;RSQ=0.5366;ERATE=0.0007;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16682663 . C CT 1104 PASS INDEL;BAVGPOST=0.847;BRSQ=0.374;LDAF=0.2173;AVGPOST=0.7574;RSQ=0.3818;ERATE=0.0608;THETA=0.0007;AC=281;AN=2184 GT:DS:GL:BD 0.12866300 0
1 16682731 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2907;AVGPOST=0.9957;RSQ=0.9919;ERATE=0.0004;THETA=0.0011;AC=636;AN=2184 GT:DS:GL:BD 0.29120880 0
1 16682822 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0096;AVGPOST=0.9973;RSQ=0.8907;ERATE=0.0004;THETA=0.0017;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 16682860 . C CA 1800 PASS INDEL;BAVGPOST=0.995;BRSQ=0.924;LDAF=0.0339;AVGPOST=0.9897;RSQ=0.8842;ERATE=0.0014;THETA=0.0008;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 16682879 . AC A 190 PASS INDEL;BAVGPOST=0.999;BRSQ=0.693;LDAF=0.0029;AVGPOST=0.9969;RSQ=0.5513;ERATE=0.0005;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16682890 . T TA 721 PASS INDEL;BAVGPOST=0.994;BRSQ=0.928;LDAF=0.0379;AVGPOST=0.9883;RSQ=0.8938;ERATE=0.0017;THETA=0.0005;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 16682900 . A AT 6026 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0305;AVGPOST=0.9992;RSQ=0.9888;ERATE=0.0005;THETA=0.0008;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 16682984 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.771;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.3811;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16683090 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.661;LDAF=0.0054;AVGPOST=0.9972;RSQ=0.8117;ERATE=0.0004;THETA=0.0044;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16683116 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0161;AVGPOST=0.9951;RSQ=0.8772;ERATE=0.0007;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 16683145 . ACT A 589 PASS INDEL;BAVGPOST=0.998;BRSQ=0.934;LDAF=0.0099;AVGPOST=0.9974;RSQ=0.8731;ERATE=0.0006;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 16683155 . C CA 1224 PASS INDEL;BAVGPOST=0.907;BRSQ=0.556;LDAF=0.1711;AVGPOST=0.8239;RSQ=0.4706;ERATE=0.0497;THETA=0.0003;AC=222;AN=2184 GT:DS:GL:BD 0.10164835 0
1 16683165 . A AAT 1396 PASS INDEL;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0097;AVGPOST=0.9989;RSQ=0.9544;ERATE=0.0005;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 16683166 . AAAT A 2997 PASS INDEL;BAVGPOST=0.990;BRSQ=0.894;LDAF=0.0506;AVGPOST=0.9965;RSQ=0.9696;ERATE=0.0005;THETA=0.0007;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 16683220 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6939;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16683290 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0030;AVGPOST=0.9990;RSQ=0.8832;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16683291 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.836;LDAF=0.0054;AVGPOST=0.9949;RSQ=0.6730;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16683438 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16683649 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.887;LDAF=0.0108;AVGPOST=0.9973;RSQ=0.8950;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 16683703 . A AT 6913 PASS INDEL;BAVGPOST=0.935;BRSQ=0.854;LDAF=0.3120;AVGPOST=0.8612;RSQ=0.7462;ERATE=0.0188;THETA=0.0020;AC=630;AN=2184 GT:DS:GL:BD 0.28846154 0
1 16683789 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.913;LDAF=0.9437;AVGPOST=0.9805;RSQ=0.8589;ERATE=0.0015;THETA=0.0006;AC=2070;AN=2184 GT:DS:GL:BD 0.94780219 1
1 16683898 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.863;LDAF=0.0077;AVGPOST=0.9988;RSQ=0.9366;ERATE=0.0004;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 16683899 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.683;LDAF=0.0027;AVGPOST=0.9975;RSQ=0.6229;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16683918 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.477;LDAF=0.0054;AVGPOST=0.9953;RSQ=0.6500;ERATE=0.0010;THETA=0.0016;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16684000 rs34255628 AT A 295 PASS INDEL;BAVGPOST=0.797;BRSQ=0.247;LDAF=0.2525;AVGPOST=0.6942;RSQ=0.3157;ERATE=0.0504;THETA=0.0002;AC=333;AN=2184 GT:DS:GL:BD 0.15247253 0
1 16684089 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2216;AVGPOST=0.9928;RSQ=0.9838;ERATE=0.0011;THETA=0.0006;AC=481;AN=2184 GT:DS:GL:BD 0.22023809 0
1 16684107 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0301;AVGPOST=0.9989;RSQ=0.9851;ERATE=0.0004;THETA=0.0003;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 16684217 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4765;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16684227 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0270;AVGPOST=0.9994;RSQ=0.9893;ERATE=0.0004;THETA=0.0015;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 16684247 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.984;LDAF=0.2182;AVGPOST=0.9959;RSQ=0.9906;ERATE=0.0008;THETA=0.0007;AC=476;AN=2184 GT:DS:GL:BD 0.21794872 0
1 16684249 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.702;LDAF=0.0060;AVGPOST=0.9955;RSQ=0.7366;ERATE=0.0005;THETA=0.0009;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 16684312 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0148;AVGPOST=0.9996;RSQ=0.9874;ERATE=0.0004;THETA=0.0005;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 16684526 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8864;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16684642 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0037;AVGPOST=0.9997;RSQ=0.9647;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16684710 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0081;AVGPOST=0.9994;RSQ=0.9686;ERATE=0.0003;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 16684745 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0028;AVGPOST=0.9995;RSQ=0.9143;ERATE=0.0003;THETA=0.0021;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16684771 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0028;AVGPOST=0.9974;RSQ=0.6970;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16684814 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0030;AVGPOST=0.9976;RSQ=0.7530;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16684877 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.985;LDAF=0.2196;AVGPOST=0.9982;RSQ=0.9958;ERATE=0.0004;THETA=0.0004;AC=480;AN=2184 GT:DS:GL:BD 0.21978022 0
1 16684893 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.980;LDAF=0.1684;AVGPOST=0.9982;RSQ=0.9945;ERATE=0.0004;THETA=0.0006;AC=369;AN=2184 GT:DS:GL:BD 0.16895604 0
1 16684920 rs113728518 CAG C 1550 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0158;AVGPOST=0.9993;RSQ=0.9793;ERATE=0.0004;THETA=0.0006;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 16684937 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5378;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16685054 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.8284;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16685092 . A AT 10949 PASS INDEL;BAVGPOST=0.964;BRSQ=0.893;LDAF=0.2156;AVGPOST=0.9411;RSQ=0.8653;ERATE=0.0093;THETA=0.0014;AC=454;AN=2184 GT:DS:GL:BD 0.20787546 0
1 16685104 . A AT 456 PASS INDEL;BAVGPOST=0.988;BRSQ=0.602;LDAF=0.0292;AVGPOST=0.9723;RSQ=0.6325;ERATE=0.0026;THETA=0.0006;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 16685216 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.818;LDAF=0.0119;AVGPOST=0.9944;RSQ=0.8224;ERATE=0.0005;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 16685221 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.538;LDAF=0.0055;AVGPOST=0.9945;RSQ=0.6267;ERATE=0.0006;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16685572 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.904;LDAF=0.0203;AVGPOST=0.9982;RSQ=0.9638;ERATE=0.0003;THETA=0.0005;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 16685589 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9538;ERATE=0.0004;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16685596 . C CT 354 PASS INDEL;BAVGPOST=0.962;BRSQ=0.533;LDAF=0.0696;AVGPOST=0.9170;RSQ=0.4663;ERATE=0.0250;THETA=0.0006;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 16685621 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.946;LDAF=0.2190;AVGPOST=0.9968;RSQ=0.9920;ERATE=0.0007;THETA=0.0002;AC=478;AN=2184 GT:DS:GL:BD 0.21886447 0
1 16685629 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.857;LDAF=0.0120;AVGPOST=0.9945;RSQ=0.8229;ERATE=0.0008;THETA=0.0016;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 16685676 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.640;LDAF=0.0162;AVGPOST=0.9870;RSQ=0.6992;ERATE=0.0016;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 16685823 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.582;LDAF=0.0051;AVGPOST=0.9915;RSQ=0.2959;ERATE=0.0013;THETA=0.0035;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16685873 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.6214;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16685881 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0032;AVGPOST=0.9973;RSQ=0.6909;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16685897 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0078;AVGPOST=0.9990;RSQ=0.9448;ERATE=0.0004;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 16685930 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.933;LDAF=0.1659;AVGPOST=0.9941;RSQ=0.9831;ERATE=0.0005;THETA=0.0004;AC=365;AN=2184 GT:DS:GL:BD 0.16712454 0
1 16685941 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.961;LDAF=0.2892;AVGPOST=0.9957;RSQ=0.9916;ERATE=0.0005;THETA=0.0005;AC=632;AN=2184 GT:DS:GL:BD 0.28937730 0
1 16685957 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.685;LDAF=0.0226;AVGPOST=0.9896;RSQ=0.8306;ERATE=0.0008;THETA=0.0005;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 16685979 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.964;LDAF=0.0258;AVGPOST=0.9978;RSQ=0.9651;ERATE=0.0005;THETA=0.0009;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 16686000 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.835;LDAF=0.0022;AVGPOST=0.9991;RSQ=0.8258;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16686157 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1691;AVGPOST=0.9987;RSQ=0.9958;ERATE=0.0005;THETA=0.0006;AC=370;AN=2184 GT:DS:GL:BD 0.16941392 0
1 16686215 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.739;LDAF=0.0027;AVGPOST=0.9997;RSQ=0.9463;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16686274 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9904;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16686275 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.841;LDAF=0.0054;AVGPOST=0.9992;RSQ=0.9324;ERATE=0.0004;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16686287 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2205;AVGPOST=0.9975;RSQ=0.9945;ERATE=0.0004;THETA=0.0005;AC=480;AN=2184 GT:DS:GL:BD 0.21978022 0
1 16686374 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16686423 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.683;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8344;ERATE=0.0004;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16686465 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.758;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.7867;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16686648 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6906;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16686715 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16686719 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.922;LDAF=0.0254;AVGPOST=0.9927;RSQ=0.8887;ERATE=0.0005;THETA=0.0007;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 16686794 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2920;AVGPOST=0.9974;RSQ=0.9955;ERATE=0.0005;THETA=0.0006;AC=637;AN=2184 GT:DS:GL:BD 0.29166666 0
1 16686957 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0270;AVGPOST=0.9987;RSQ=0.9859;ERATE=0.0003;THETA=0.0005;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 16687046 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0267;AVGPOST=0.9996;RSQ=0.9930;ERATE=0.0004;THETA=0.0004;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 16687159 . T TTTTA 119 PASS INDEL;BAVGPOST=0.999;BRSQ=0.608;LDAF=0.0034;AVGPOST=0.9967;RSQ=0.6084;ERATE=0.0006;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16687308 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0102;AVGPOST=0.9942;RSQ=0.7675;ERATE=0.0008;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 16687379 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.602;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5253;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16687416 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.933;LDAF=0.9432;AVGPOST=0.9777;RSQ=0.8599;ERATE=0.0014;THETA=0.0015;AC=2072;AN=2184 GT:DS:GL:BD 0.94871795 1
1 16687520 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4609;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16687562 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.3915;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16687574 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.751;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4304;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16687631 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0025;AVGPOST=0.9981;RSQ=0.6645;ERATE=0.0007;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16687632 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4114;AVGPOST=0.9888;RSQ=0.9836;ERATE=0.0005;THETA=0.0010;AC=900;AN=2184 GT:DS:GL:BD 0.41208792 0
1 16687654 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.4358;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16687677 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.838;LDAF=0.0028;AVGPOST=0.9981;RSQ=0.7356;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16687829 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.859;LDAF=0.0298;AVGPOST=0.9960;RSQ=0.9403;ERATE=0.0006;THETA=0.0004;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 16687843 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.473;LDAF=0.0061;AVGPOST=0.9935;RSQ=0.5252;ERATE=0.0005;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16687886 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.905;LDAF=0.0086;AVGPOST=0.9971;RSQ=0.8815;ERATE=0.0005;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 16687978 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.790;LDAF=0.0033;AVGPOST=0.9980;RSQ=0.7595;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16688055 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.967;BRSQ=0.946;LDAF=0.4099;AVGPOST=0.9719;RSQ=0.9604;ERATE=0.0017;THETA=0.0004;AC=903;AN=2184 GT:DS:GL:BD 0.41346154 0
1 16688144 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.610;LDAF=0.0022;AVGPOST=0.9966;RSQ=0.4277;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16688213 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.954;LDAF=0.0276;AVGPOST=0.9978;RSQ=0.9641;ERATE=0.0007;THETA=0.0006;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 16688419 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5522;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16688474 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0035;AVGPOST=0.9975;RSQ=0.7204;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16688547 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5244;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16688632 . A AG 1515 PASS INDEL;BAVGPOST=0.903;BRSQ=0.704;LDAF=0.1920;AVGPOST=0.9361;RSQ=0.8549;ERATE=0.0039;THETA=0.0004;AC=444;AN=2184 GT:DS:GL:BD 0.20329671 0
1 16688635 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.978;LDAF=0.2206;AVGPOST=0.9909;RSQ=0.9795;ERATE=0.0007;THETA=0.0006;AC=479;AN=2184 GT:DS:GL:BD 0.21932234 0
1 16688683 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.9484;AVGPOST=0.9922;RSQ=0.9448;ERATE=0.0007;THETA=0.0006;AC=2075;AN=2184 GT:DS:GL:BD 0.95009160 1
1 16688719 . C CG 123 PASS INDEL;BAVGPOST=1.000;BRSQ=0.707;LDAF=0.0019;AVGPOST=0.9971;RSQ=0.3620;ERATE=0.0006;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16688757 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0101;AVGPOST=0.9984;RSQ=0.9423;ERATE=0.0006;THETA=0.0019;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 16688760 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.932;BRSQ=0.418;LDAF=0.9138;AVGPOST=0.9022;RSQ=0.5240;ERATE=0.0179;THETA=0.0004;AC=2057;AN=2184 GT:DS:GL:BD 0.94184983 1
1 16688781 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0111;AVGPOST=0.9978;RSQ=0.9181;ERATE=0.0005;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 16688831 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.959;LDAF=0.0306;AVGPOST=0.9989;RSQ=0.9847;ERATE=0.0004;THETA=0.0008;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 16688918 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0163;AVGPOST=0.9964;RSQ=0.9128;ERATE=0.0007;THETA=0.0005;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 16689132 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.791;LDAF=0.0035;AVGPOST=0.9967;RSQ=0.6350;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16689223 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.742;LDAF=0.0016;AVGPOST=0.9976;RSQ=0.3741;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16689235 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7355;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16689319 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0161;AVGPOST=0.9975;RSQ=0.9397;ERATE=0.0007;THETA=0.0007;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 16689476 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.655;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.4443;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16689558 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0148;AVGPOST=0.9989;RSQ=0.9733;ERATE=0.0004;THETA=0.0006;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 16689750 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.8059;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16689944 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16690061 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0520;AVGPOST=0.9970;RSQ=0.9781;ERATE=0.0004;THETA=0.0010;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 16690218 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.638;LDAF=0.0085;AVGPOST=0.9959;RSQ=0.7856;ERATE=0.0007;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 16690306 rs34681842 AT A 237 PASS INDEL;BAVGPOST=0.951;BRSQ=0.511;LDAF=0.0778;AVGPOST=0.9199;RSQ=0.6085;ERATE=0.0080;THETA=0.0003;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 16690357 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.621;LDAF=0.0088;AVGPOST=0.9959;RSQ=0.8069;ERATE=0.0008;THETA=0.0008;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16690370 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.901;BRSQ=0.748;LDAF=0.2486;AVGPOST=0.9680;RSQ=0.9355;ERATE=0.0013;THETA=0.0003;AC=559;AN=2184 GT:DS:GL:BD 0.25595239 0
1 16690433 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.641;LDAF=0.0029;AVGPOST=0.9966;RSQ=0.4835;ERATE=0.0008;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16690439 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.744;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.4437;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16690478 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.4550;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16690539 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5116;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16690551 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0074;AVGPOST=0.9998;RSQ=0.9881;ERATE=0.0003;THETA=0.0010;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 16690569 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6448;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16690622 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6786;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16690635 . TTTTG T 651 PASS INDEL;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0067;AVGPOST=0.9942;RSQ=0.6786;ERATE=0.0005;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16690646 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0036;AVGPOST=0.9991;RSQ=0.8838;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16690662 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.730;LDAF=0.0026;AVGPOST=0.9962;RSQ=0.4268;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16690847 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2914;AVGPOST=0.9910;RSQ=0.9847;ERATE=0.0014;THETA=0.0006;AC=633;AN=2184 GT:DS:GL:BD 0.28983516 0
1 16690878 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0307;AVGPOST=0.9985;RSQ=0.9816;ERATE=0.0004;THETA=0.0007;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 16690928 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16691022 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2104;AVGPOST=0.9963;RSQ=0.9911;ERATE=0.0003;THETA=0.0009;AC=460;AN=2184 GT:DS:GL:BD 0.21062271 0
1 16691023 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2913;AVGPOST=0.9970;RSQ=0.9946;ERATE=0.0006;THETA=0.0005;AC=636;AN=2184 GT:DS:GL:BD 0.29120880 0
1 16691055 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16691100 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5861;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16691377 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.950;LDAF=0.0078;AVGPOST=0.9985;RSQ=0.9158;ERATE=0.0004;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 16691447 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0038;AVGPOST=0.9994;RSQ=0.9289;ERATE=0.0003;THETA=0.0013;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16691628 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16691722 . T TA 163 PASS INDEL;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4094;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16691753 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16691769 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0042;AVGPOST=0.9996;RSQ=0.9534;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16691850 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.955;LDAF=0.0257;AVGPOST=0.9976;RSQ=0.9614;ERATE=0.0004;THETA=0.0004;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 16691942 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0320;AVGPOST=0.9990;RSQ=0.9892;ERATE=0.0004;THETA=0.0004;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 16692050 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2197;AVGPOST=0.9979;RSQ=0.9950;ERATE=0.0005;THETA=0.0002;AC=479;AN=2184 GT:DS:GL:BD 0.21932234 0
1 16692170 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8893;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16692267 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0095;AVGPOST=0.9993;RSQ=0.9690;ERATE=0.0004;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 16692301 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0052;AVGPOST=0.9986;RSQ=0.8714;ERATE=0.0004;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16692332 rs111901885 GT G 23038 PASS INDEL;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2915;AVGPOST=0.9957;RSQ=0.9917;ERATE=0.0007;THETA=0.0003;AC=635;AN=2184 GT:DS:GL:BD 0.29075092 0
1 16692334 . TA T 1298 PASS INDEL;BAVGPOST=0.912;BRSQ=0.800;LDAF=0.2720;AVGPOST=0.9784;RSQ=0.9596;ERATE=0.0008;THETA=0.0006;AC=607;AN=2184 GT:DS:GL:BD 0.27793041 0
1 16692394 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0008;AVGPOST=0.9989;RSQ=0.3947;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16692430 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16692431 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5016;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16692447 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.754;LDAF=0.0035;AVGPOST=0.9983;RSQ=0.7966;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16692519 rs111421932 CTTG C 1507 PASS INDEL;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0148;AVGPOST=0.9996;RSQ=0.9874;ERATE=0.0003;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 16692566 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.2184;AVGPOST=0.9957;RSQ=0.9901;ERATE=0.0004;THETA=0.0003;AC=478;AN=2184 GT:DS:GL:BD 0.21886447 0
1 16692978 . C CG 5208 PASS INDEL;BAVGPOST=0.947;BRSQ=0.809;LDAF=0.1499;AVGPOST=0.9637;RSQ=0.8942;ERATE=0.0030;THETA=0.0007;AC=329;AN=2184 GT:DS:GL:BD 0.15064102 0
1 16693079 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0143;AVGPOST=0.9988;RSQ=0.9652;ERATE=0.0004;THETA=0.0010;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 16693128 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9843;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16693143 . G GA 90 PASS INDEL;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.3451;ERATE=0.0007;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16693246 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0301;AVGPOST=0.9991;RSQ=0.9895;ERATE=0.0004;THETA=0.0006;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 16693442 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.746;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5571;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16693480 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.7736;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16693516 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5736;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16693537 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0029;AVGPOST=0.9988;RSQ=0.8427;ERATE=0.0003;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16693725 rs17551926 T TG 6132 PASS INDEL;BAVGPOST=0.977;BRSQ=0.922;LDAF=0.1674;AVGPOST=0.9834;RSQ=0.9562;ERATE=0.0012;THETA=0.0002;AC=362;AN=2184 GT:DS:GL:BD 0.16575092 0
1 16693985 . TTC T 2782 PASS INDEL;BAVGPOST=0.996;BRSQ=0.963;LDAF=0.0523;AVGPOST=0.9922;RSQ=0.9381;ERATE=0.0009;THETA=0.0010;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 16694065 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.908;LDAF=0.0306;AVGPOST=0.9985;RSQ=0.9797;ERATE=0.0006;THETA=0.0008;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 16694303 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0025;AVGPOST=0.9982;RSQ=0.6999;ERATE=0.0008;THETA=0.0030;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16694310 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0096;AVGPOST=0.9986;RSQ=0.9317;ERATE=0.0003;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 16694313 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0148;AVGPOST=0.9978;RSQ=0.9424;ERATE=0.0003;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 16694354 . T TC 193 PASS INDEL;BAVGPOST=0.999;BRSQ=0.767;LDAF=0.0034;AVGPOST=0.9969;RSQ=0.6598;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16694402 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0095;AVGPOST=0.9991;RSQ=0.9596;ERATE=0.0004;THETA=0.0013;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 16694415 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0036;AVGPOST=0.9968;RSQ=0.6544;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16694435 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0212;AVGPOST=0.9968;RSQ=0.9445;ERATE=0.0005;THETA=0.0008;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 16694471 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.492;LDAF=0.0056;AVGPOST=0.9961;RSQ=0.7123;ERATE=0.0009;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16694474 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.726;LDAF=0.0045;AVGPOST=0.9979;RSQ=0.8160;ERATE=0.0005;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16694528 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16694565 . T TC 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0037;AVGPOST=0.9958;RSQ=0.5603;ERATE=0.0006;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16694639 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9617;ERATE=0.0003;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16694774 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2199;AVGPOST=0.9973;RSQ=0.9939;ERATE=0.0004;THETA=0.0009;AC=481;AN=2184 GT:DS:GL:BD 0.22023809 0
1 16694796 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16694806 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0161;AVGPOST=0.9998;RSQ=0.9950;ERATE=0.0003;THETA=0.0006;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 16694903 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16694978 . GGTT G 29415 PASS INDEL;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.2219;AVGPOST=0.9847;RSQ=0.9669;ERATE=0.0023;THETA=0.0032;AC=477;AN=2184 GT:DS:GL:BD 0.21840659 0
1 16695115 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0161;AVGPOST=0.9996;RSQ=0.9901;ERATE=0.0003;THETA=0.0006;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 16695146 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9055;ERATE=0.0008;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16695172 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9921;ERATE=0.0003;THETA=0.0025;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16695218 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.734;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6807;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16695255 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16695323 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0077;AVGPOST=0.9991;RSQ=0.9519;ERATE=0.0004;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 16695400 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0299;AVGPOST=0.9994;RSQ=0.9936;ERATE=0.0003;THETA=0.0020;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 16695423 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.852;LDAF=0.0071;AVGPOST=0.9976;RSQ=0.9028;ERATE=0.0003;THETA=0.0050;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16695537 . A AG 17 PASS INDEL;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6495;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16695561 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0054;AVGPOST=0.9992;RSQ=0.9528;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16695566 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7582;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16695619 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.827;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9571;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16695752 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16695774 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16695803 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16695844 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16695917 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0180;AVGPOST=0.9996;RSQ=0.9904;ERATE=0.0008;THETA=0.0006;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 16695981 . C CT 120 PASS INDEL;BAVGPOST=0.994;BRSQ=0.535;LDAF=0.0074;AVGPOST=0.9900;RSQ=0.4961;ERATE=0.0014;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16695998 rs59924959 TCAC T 5403 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0314;AVGPOST=0.9988;RSQ=0.9848;ERATE=0.0005;THETA=0.0005;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 16696050 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8190;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16696244 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0053;AVGPOST=0.9994;RSQ=0.9499;ERATE=0.0003;THETA=0.0012;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16696302 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.769;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7372;ERATE=0.0005;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16696357 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.680;LDAF=0.0032;AVGPOST=0.9971;RSQ=0.5988;ERATE=0.0004;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16696382 . C CA 6364 PASS INDEL;BAVGPOST=0.884;BRSQ=0.704;LDAF=0.2802;AVGPOST=0.8224;RSQ=0.6439;ERATE=0.0330;THETA=0.0005;AC=543;AN=2184 GT:DS:GL:BD 0.24862637 0
1 16696387 . A AC 44 PASS INDEL;BAVGPOST=0.998;BRSQ=0.501;LDAF=0.0040;AVGPOST=0.9982;RSQ=0.8317;ERATE=0.0005;THETA=0.0023;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16696389 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.438;LDAF=0.0047;AVGPOST=0.9956;RSQ=0.6447;ERATE=0.0011;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16696396 . A AC 50 PASS INDEL;BAVGPOST=0.999;BRSQ=0.525;LDAF=0.0024;AVGPOST=0.9970;RSQ=0.5176;ERATE=0.0006;THETA=0.0014;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16696397 . A AC 1105 PASS INDEL;BAVGPOST=0.987;BRSQ=0.792;LDAF=0.0327;AVGPOST=0.9854;RSQ=0.8377;ERATE=0.0013;THETA=0.0013;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 16696457 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6192;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16696574 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.751;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6422;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16696612 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0316;AVGPOST=0.9999;RSQ=0.9981;ERATE=0.0003;THETA=0.0010;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 16696645 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0316;AVGPOST=0.9999;RSQ=0.9988;ERATE=0.0003;THETA=0.0009;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 16696771 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0043;AVGPOST=0.9987;RSQ=0.8802;ERATE=0.0004;THETA=0.0011;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16696780 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.617;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.6900;ERATE=0.0004;THETA=0.0019;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16696910 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.864;LDAF=0.0092;AVGPOST=0.9967;RSQ=0.8457;ERATE=0.0007;THETA=0.0008;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 16696957 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1649;AVGPOST=0.9911;RSQ=0.9733;ERATE=0.0007;THETA=0.0008;AC=360;AN=2184 GT:DS:GL:BD 0.16483517 0
1 16697034 rs55855357 A AT 6436 PASS INDEL;BAVGPOST=0.980;BRSQ=0.932;LDAF=0.1843;AVGPOST=0.9378;RSQ=0.8374;ERATE=0.0089;THETA=0.0008;AC=374;AN=2184 GT:DS:GL:BD 0.17124543 0
1 16697133 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.727;LDAF=0.0037;AVGPOST=0.9972;RSQ=0.7102;ERATE=0.0005;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16697233 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0198;AVGPOST=0.9995;RSQ=0.9891;ERATE=0.0004;THETA=0.0004;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 16697276 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0333;AVGPOST=0.9979;RSQ=0.9758;ERATE=0.0004;THETA=0.0004;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 16697311 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0316;AVGPOST=0.9998;RSQ=0.9969;ERATE=0.0003;THETA=0.0009;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 16697312 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0094;AVGPOST=0.9995;RSQ=0.9787;ERATE=0.0004;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 16697313 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0093;AVGPOST=0.9997;RSQ=0.9851;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 16697365 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.6438;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16697489 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6043;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16697637 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.815;LDAF=0.0074;AVGPOST=0.9993;RSQ=0.9536;ERATE=0.0005;THETA=0.0032;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 16697674 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.629;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5043;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16697878 . T TCTCCC 112 PASS INDEL;BAVGPOST=0.997;BRSQ=0.452;LDAF=0.0097;AVGPOST=0.9847;RSQ=0.4113;ERATE=0.0014;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16697923 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.946;LDAF=0.1040;AVGPOST=0.9852;RSQ=0.9394;ERATE=0.0062;THETA=0.0007;AC=223;AN=2184 GT:DS:GL:BD 0.10210623 0
1 16697962 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.924;LDAF=0.0144;AVGPOST=0.9982;RSQ=0.9454;ERATE=0.0010;THETA=0.0018;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 16697974 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.553;LDAF=0.0024;AVGPOST=0.9983;RSQ=0.7102;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16697995 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.433;LDAF=0.0185;AVGPOST=0.9744;RSQ=0.4660;ERATE=0.0035;THETA=0.0010;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 16698148 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.983;LDAF=0.0513;AVGPOST=0.9965;RSQ=0.9698;ERATE=0.0005;THETA=0.0005;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 16698255 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0187;AVGPOST=0.9980;RSQ=0.9600;ERATE=0.0007;THETA=0.0008;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 16698268 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.726;LDAF=0.0016;AVGPOST=0.9981;RSQ=0.4826;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16698317 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0019;AVGPOST=0.9978;RSQ=0.5386;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16698371 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.722;LDAF=0.0040;AVGPOST=0.9978;RSQ=0.7661;ERATE=0.0005;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16698372 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6620;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16698449 . TTG T 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.727;LDAF=0.0027;AVGPOST=0.9956;RSQ=0.4039;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16698623 . C CT 97 PASS INDEL;BAVGPOST=0.977;BRSQ=0.524;LDAF=0.0495;AVGPOST=0.9410;RSQ=0.5004;ERATE=0.0155;THETA=0.0004;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 16698647 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0316;AVGPOST=0.9991;RSQ=0.9880;ERATE=0.0004;THETA=0.0016;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 16698705 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0035;AVGPOST=0.9952;RSQ=0.5734;ERATE=0.0004;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16698774 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5436;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16698852 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0066;AVGPOST=0.9995;RSQ=0.9639;ERATE=0.0004;THETA=0.0009;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 16698995 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6418;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16699057 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0505;AVGPOST=0.9984;RSQ=0.9884;ERATE=0.0003;THETA=0.0004;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 16699296 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16699355 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0516;AVGPOST=0.9998;RSQ=0.9984;ERATE=0.0003;THETA=0.0005;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 16699413 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0077;AVGPOST=1.0000;RSQ=0.9975;ERATE=0.0003;THETA=0.0009;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 16699429 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6819;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16699432 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.6361;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16699437 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9294;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16699530 . T TG 8044 PASS INDEL;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0449;AVGPOST=0.9959;RSQ=0.9686;ERATE=0.0005;THETA=0.0009;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 16699648 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9157;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16699813 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7669;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16699883 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0071;AVGPOST=0.9993;RSQ=0.9563;ERATE=0.0004;THETA=0.0010;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16699905 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0529;AVGPOST=0.9969;RSQ=0.9744;ERATE=0.0006;THETA=0.0003;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 16699963 rs77344117 A AC 27231 PASS INDEL;BAVGPOST=0.985;BRSQ=0.977;LDAF=0.4085;AVGPOST=0.9774;RSQ=0.9699;ERATE=0.0013;THETA=0.0003;AC=893;AN=2184 GT:DS:GL:BD 0.40888280 0
1 16699988 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.533;LDAF=0.0086;AVGPOST=0.9884;RSQ=0.4738;ERATE=0.0012;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 16700070 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.949;LDAF=0.0265;AVGPOST=0.9886;RSQ=0.8378;ERATE=0.0007;THETA=0.0010;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 16700074 . C CA 1655 PASS INDEL;BAVGPOST=0.743;BRSQ=0.294;LDAF=0.3003;AVGPOST=0.7080;RSQ=0.3700;ERATE=0.0715;THETA=0.0009;AC=434;AN=2184 GT:DS:GL:BD 0.19871795 0
1 16700125 . ACT A 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.733;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4861;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16700146 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0026;AVGPOST=0.9971;RSQ=0.5467;ERATE=0.0006;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16700283 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.756;LDAF=0.0056;AVGPOST=0.9984;RSQ=0.8663;ERATE=0.0005;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16700367 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6082;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16700456 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0516;AVGPOST=0.9990;RSQ=0.9919;ERATE=0.0004;THETA=0.0009;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 16700472 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6355;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16700485 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.8232;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16700501 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0051;AVGPOST=0.9989;RSQ=0.9083;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16700506 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5839;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16700553 . CA C 1541 PASS INDEL;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0117;AVGPOST=0.9986;RSQ=0.9528;ERATE=0.0004;THETA=0.0009;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 16700586 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0198;AVGPOST=0.9996;RSQ=0.9918;ERATE=0.0003;THETA=0.0005;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 16700593 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0316;AVGPOST=0.9997;RSQ=0.9964;ERATE=0.0004;THETA=0.0005;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 16700657 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0025;AVGPOST=0.9994;RSQ=0.8821;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16700671 . CAGAA C 119 PASS INDEL;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5394;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16700793 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.5571;AVGPOST=0.9935;RSQ=0.9895;ERATE=0.0005;THETA=0.0003;AC=1215;AN=2184 GT:DS:GL:BD 0.55631870 1
1 16700865 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7132;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16700882 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0040;AVGPOST=0.9988;RSQ=0.8912;ERATE=0.0003;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16700968 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.940;LDAF=0.0122;AVGPOST=0.9990;RSQ=0.9670;ERATE=0.0004;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 16701057 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6049;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16701098 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0315;AVGPOST=0.9995;RSQ=0.9939;ERATE=0.0004;THETA=0.0005;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 16701127 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.8924;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16701179 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0102;AVGPOST=0.9996;RSQ=0.9841;ERATE=0.0004;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 16701187 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0208;AVGPOST=0.9990;RSQ=0.9787;ERATE=0.0005;THETA=0.0013;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 16701192 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7289;ERATE=0.0006;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16701252 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0317;AVGPOST=0.9997;RSQ=0.9964;ERATE=0.0003;THETA=0.0006;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 16701286 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6772;ERATE=0.0003;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16701335 . TGTA T 1609 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0094;AVGPOST=0.9995;RSQ=0.9787;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 16701368 . TTTTTG T 6800 PASS INDEL;BAVGPOST=0.988;BRSQ=0.854;LDAF=0.0520;AVGPOST=0.9934;RSQ=0.9511;ERATE=0.0006;THETA=0.0005;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 16701382 rs79155036 TG T 485 PASS INDEL;BAVGPOST=0.988;BRSQ=0.851;LDAF=0.0494;AVGPOST=0.9941;RSQ=0.9565;ERATE=0.0005;THETA=0.0010;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 16701383 rs79155036 G GT 241 PASS INDEL;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9211;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16701417 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0319;AVGPOST=0.9991;RSQ=0.9884;ERATE=0.0005;THETA=0.0007;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 16701480 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.704;LDAF=0.0025;AVGPOST=0.9977;RSQ=0.6169;ERATE=0.0008;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16701521 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.594;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4003;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16701614 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0117;AVGPOST=0.9967;RSQ=0.8867;ERATE=0.0005;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 16701650 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.610;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5488;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16701733 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0089;AVGPOST=0.9992;RSQ=0.9570;ERATE=0.0004;THETA=0.0009;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 16701793 . CTGTA C 1090 PASS INDEL;BAVGPOST=0.997;BRSQ=0.766;LDAF=0.0098;AVGPOST=0.9948;RSQ=0.7966;ERATE=0.0003;THETA=0.0009;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 16701902 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0517;AVGPOST=0.9990;RSQ=0.9925;ERATE=0.0004;THETA=0.0004;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 16702018 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0200;AVGPOST=0.9985;RSQ=0.9697;ERATE=0.0004;THETA=0.0006;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 16702042 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.707;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6490;ERATE=0.0004;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16702059 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0198;AVGPOST=0.9994;RSQ=0.9850;ERATE=0.0004;THETA=0.0003;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 16702162 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0021;AVGPOST=0.9973;RSQ=0.5880;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16702240 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0198;AVGPOST=0.9997;RSQ=0.9925;ERATE=0.0003;THETA=0.0004;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 16702390 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0007;AVGPOST=0.9989;RSQ=0.3329;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16702441 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5790;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16702511 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0055;AVGPOST=0.9983;RSQ=0.8968;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16702597 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0066;AVGPOST=0.9996;RSQ=0.9740;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 16702720 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.926;LDAF=0.0284;AVGPOST=0.9947;RSQ=0.9346;ERATE=0.0004;THETA=0.0012;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 16702731 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0197;AVGPOST=0.9999;RSQ=0.9967;ERATE=0.0003;THETA=0.0007;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 16702771 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.8035;ERATE=0.0005;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16702788 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16702943 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6236;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16703060 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0039;AVGPOST=0.9982;RSQ=0.8096;ERATE=0.0005;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16703066 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.732;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.5569;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16703161 . TGTG T 4590 PASS INDEL;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0309;AVGPOST=0.9990;RSQ=0.9860;ERATE=0.0005;THETA=0.0009;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 16703182 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.774;LDAF=0.0075;AVGPOST=0.9947;RSQ=0.7381;ERATE=0.0003;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 16703185 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0534;AVGPOST=0.9961;RSQ=0.9720;ERATE=0.0005;THETA=0.0004;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 16703234 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0317;AVGPOST=0.9995;RSQ=0.9932;ERATE=0.0003;THETA=0.0010;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 16703246 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0115;AVGPOST=0.9979;RSQ=0.9275;ERATE=0.0006;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 16703288 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.835;LDAF=0.0100;AVGPOST=0.9960;RSQ=0.8467;ERATE=0.0006;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 16703312 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.848;LDAF=0.0033;AVGPOST=0.9977;RSQ=0.7039;ERATE=0.0005;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16703313 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.809;LDAF=0.0226;AVGPOST=0.9919;RSQ=0.8762;ERATE=0.0007;THETA=0.0005;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 16703313 . A AAC 3077 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0328;AVGPOST=0.9973;RSQ=0.9680;ERATE=0.0004;THETA=0.0006;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 16703375 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0026;AVGPOST=0.9968;RSQ=0.5085;ERATE=0.0010;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16703441 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0038;AVGPOST=0.9965;RSQ=0.6845;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16703448 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4115;AVGPOST=0.9964;RSQ=0.9946;ERATE=0.0005;THETA=0.0006;AC=896;AN=2184 GT:DS:GL:BD 0.41025642 0
1 16703463 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.1133;AVGPOST=0.9991;RSQ=0.9966;ERATE=0.0003;THETA=0.0002;AC=247;AN=2184 GT:DS:GL:BD 0.11309524 0
1 16703467 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0062;AVGPOST=0.9989;RSQ=0.9278;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 16703573 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16703669 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6244;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16703882 . AG A 12 PASS INDEL;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.6856;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16703906 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.975;LDAF=0.0515;AVGPOST=0.9962;RSQ=0.9717;ERATE=0.0004;THETA=0.0005;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 16704135 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7223;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16704161 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.777;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.7692;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16704206 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16704269 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.956;LDAF=0.0158;AVGPOST=0.9991;RSQ=0.9775;ERATE=0.0003;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 16704459 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0051;AVGPOST=0.9990;RSQ=0.9155;ERATE=0.0004;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16704479 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=0.9999;RSQ=0.0499;ERATE=0.0003;THETA=0.0009;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 16704518 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.7961;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16704538 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0105;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 16704615 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6889;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16704653 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1132;AVGPOST=0.9990;RSQ=0.9965;ERATE=0.0004;THETA=0.0009;AC=247;AN=2184 GT:DS:GL:BD 0.11309524 0
1 16704676 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0007;AVGPOST=0.9989;RSQ=0.4593;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16704736 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0748;AVGPOST=0.9979;RSQ=0.9879;ERATE=0.0004;THETA=0.0004;AC=163;AN=2184 GT:DS:GL:BD 0.07463370 0
1 16704840 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.647;LDAF=0.0082;AVGPOST=0.9939;RSQ=0.7012;ERATE=0.0010;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16705069 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0090;AVGPOST=0.9989;RSQ=0.9430;ERATE=0.0004;THETA=0.0013;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 16705106 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6860;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16705186 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0526;AVGPOST=0.9984;RSQ=0.9894;ERATE=0.0003;THETA=0.0008;AC=114;AN=2184 GT:DS:GL:BD 0.05219780 0
1 16705352 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0094;AVGPOST=0.9995;RSQ=0.9743;ERATE=0.0004;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 16705369 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.791;LDAF=0.0153;AVGPOST=0.9977;RSQ=0.9311;ERATE=0.0004;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 16705447 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.617;LDAF=0.0023;AVGPOST=0.9980;RSQ=0.6494;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16705469 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.560;LDAF=0.0040;AVGPOST=0.9959;RSQ=0.5642;ERATE=0.0008;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16705537 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0317;AVGPOST=0.9996;RSQ=0.9945;ERATE=0.0003;THETA=0.0009;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 16705544 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1133;AVGPOST=0.9993;RSQ=0.9973;ERATE=0.0004;THETA=0.0005;AC=247;AN=2184 GT:DS:GL:BD 0.11309524 0
1 16705588 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8497;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16705803 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0198;AVGPOST=0.9997;RSQ=0.9924;ERATE=0.0003;THETA=0.0004;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 16705806 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.615;LDAF=0.0048;AVGPOST=0.9977;RSQ=0.7904;ERATE=0.0009;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16705814 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0205;AVGPOST=0.9982;RSQ=0.9650;ERATE=0.0005;THETA=0.0005;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 16705845 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6760;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16705857 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0515;AVGPOST=0.9986;RSQ=0.9884;ERATE=0.0004;THETA=0.0006;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 16705940 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0023;AVGPOST=0.9973;RSQ=0.5449;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16706018 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5661;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16706068 . GC G 202 PASS INDEL;BAVGPOST=1.000;BRSQ=0.773;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4748;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16706075 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.5573;AVGPOST=0.9946;RSQ=0.9905;ERATE=0.0006;THETA=0.0007;AC=1217;AN=2184 GT:DS:GL:BD 0.55723441 1
1 16706103 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0020;AVGPOST=0.9972;RSQ=0.4797;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16706448 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4957;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16706503 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0106;AVGPOST=0.9997;RSQ=0.9885;ERATE=0.0003;THETA=0.0011;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 16706521 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0106;AVGPOST=0.9996;RSQ=0.9849;ERATE=0.0004;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 16706530 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8108;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16706738 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.520;LDAF=0.0028;AVGPOST=0.9967;RSQ=0.6132;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16706788 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.567;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5116;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16706836 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.736;LDAF=0.0269;AVGPOST=0.9880;RSQ=0.8224;ERATE=0.0007;THETA=0.0006;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 16706839 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.974;LDAF=0.1144;AVGPOST=0.9896;RSQ=0.9649;ERATE=0.0009;THETA=0.0006;AC=246;AN=2184 GT:DS:GL:BD 0.11263736 0
1 16706851 . G GT 2801 PASS INDEL;BAVGPOST=0.998;BRSQ=0.967;LDAF=0.0320;AVGPOST=0.9988;RSQ=0.9843;ERATE=0.0005;THETA=0.0004;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 16707001 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0535;AVGPOST=0.9965;RSQ=0.9761;ERATE=0.0004;THETA=0.0004;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 16707025 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0066;AVGPOST=0.9995;RSQ=0.9648;ERATE=0.0004;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 16707056 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0330;AVGPOST=0.9969;RSQ=0.9685;ERATE=0.0004;THETA=0.0005;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 16707065 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0094;AVGPOST=0.9995;RSQ=0.9787;ERATE=0.0004;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 16707067 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.632;LDAF=0.0014;AVGPOST=0.9979;RSQ=0.4150;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16707163 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8879;ERATE=0.0003;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16707224 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0302;AVGPOST=0.9959;RSQ=0.9487;ERATE=0.0006;THETA=0.0006;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 16707429 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.739;LDAF=0.0168;AVGPOST=0.9930;RSQ=0.8397;ERATE=0.0006;THETA=0.0006;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 16707493 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.555;LDAF=0.0047;AVGPOST=0.9952;RSQ=0.6012;ERATE=0.0007;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16707593 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.901;LDAF=0.0102;AVGPOST=0.9979;RSQ=0.9176;ERATE=0.0004;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 16707661 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.695;LDAF=0.0038;AVGPOST=0.9949;RSQ=0.5081;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16707895 . C CA 2800 PASS INDEL;BAVGPOST=0.993;BRSQ=0.948;LDAF=0.0533;AVGPOST=0.9954;RSQ=0.9630;ERATE=0.0005;THETA=0.0014;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 16707949 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.761;LDAF=0.0131;AVGPOST=0.9876;RSQ=0.6382;ERATE=0.0025;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 16707967 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.447;LDAF=0.0049;AVGPOST=0.9935;RSQ=0.4981;ERATE=0.0009;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16708066 rs72496640 AG A 1027 PASS INDEL;BAVGPOST=0.990;BRSQ=0.907;LDAF=0.0417;AVGPOST=0.9837;RSQ=0.8561;ERATE=0.0028;THETA=0.0006;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 16708148 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.797;LDAF=0.0029;AVGPOST=0.9984;RSQ=0.7717;ERATE=0.0005;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16708202 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.974;LDAF=0.0261;AVGPOST=0.9979;RSQ=0.9663;ERATE=0.0004;THETA=0.0007;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 16708298 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0033;AVGPOST=0.9968;RSQ=0.5701;ERATE=0.0015;THETA=0.0016;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16708300 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0308;AVGPOST=0.9936;RSQ=0.9312;ERATE=0.0006;THETA=0.0005;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 16708418 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.816;LDAF=0.0024;AVGPOST=0.9991;RSQ=0.8395;ERATE=0.0005;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16708542 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8061;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16708568 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7941;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16708596 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0080;AVGPOST=0.9996;RSQ=0.9757;ERATE=0.0003;THETA=0.0007;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 16708680 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8690;ERATE=0.0004;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16708721 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0319;AVGPOST=0.9980;RSQ=0.9765;ERATE=0.0004;THETA=0.0005;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 16708831 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.613;LDAF=0.0056;AVGPOST=0.9957;RSQ=0.6964;ERATE=0.0005;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16708880 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0106;AVGPOST=0.9998;RSQ=0.9904;ERATE=0.0003;THETA=0.0010;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 16708889 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.413;LDAF=0.0047;AVGPOST=0.9922;RSQ=0.3845;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16708944 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.709;LDAF=0.0104;AVGPOST=0.9961;RSQ=0.8408;ERATE=0.0008;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 16708996 . T TTG 2884 PASS INDEL;BAVGPOST=0.986;BRSQ=0.828;LDAF=0.0349;AVGPOST=0.9892;RSQ=0.8941;ERATE=0.0004;THETA=0.0004;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 16708999 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.920;LDAF=0.0298;AVGPOST=0.9936;RSQ=0.9241;ERATE=0.0004;THETA=0.0006;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 16709082 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0749;AVGPOST=0.9958;RSQ=0.9774;ERATE=0.0003;THETA=0.0008;AC=162;AN=2184 GT:DS:GL:BD 0.07417583 0
1 16709105 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.618;LDAF=0.0028;AVGPOST=0.9967;RSQ=0.5993;ERATE=0.0004;THETA=0.0035;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16709242 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.755;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5509;ERATE=0.0005;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16709434 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.977;LDAF=0.7196;AVGPOST=0.9705;RSQ=0.9468;ERATE=0.0034;THETA=0.0004;AC=1582;AN=2184 GT:DS:GL:BD 0.72435898 1
1 16709463 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.542;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.3511;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16709464 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.849;LDAF=0.0047;AVGPOST=0.9955;RSQ=0.6009;ERATE=0.0007;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16709519 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.898;LDAF=0.0104;AVGPOST=0.9979;RSQ=0.9228;ERATE=0.0003;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 16709521 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0522;AVGPOST=0.9985;RSQ=0.9870;ERATE=0.0004;THETA=0.0006;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 16709547 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0075;AVGPOST=0.9997;RSQ=0.9797;ERATE=0.0003;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 16709612 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0012;AVGPOST=0.9981;RSQ=0.4310;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16709630 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16709655 . TTTTC T 141 PASS INDEL;BAVGPOST=0.999;BRSQ=0.739;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.7089;ERATE=0.0009;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16709673 . CTCCT C 1365 PASS INDEL;BAVGPOST=0.994;BRSQ=0.789;LDAF=0.0194;AVGPOST=0.9850;RSQ=0.6945;ERATE=0.0032;THETA=0.0010;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 16709830 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0037;AVGPOST=0.9981;RSQ=0.7749;ERATE=0.0006;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16709980 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5055;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16710086 . CTTTT C 8611 PASS INDEL;BAVGPOST=0.995;BRSQ=0.952;LDAF=0.0534;AVGPOST=0.9977;RSQ=0.9821;ERATE=0.0005;THETA=0.0009;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 16710404 . C CG 337 PASS INDEL;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0040;AVGPOST=0.9992;RSQ=0.9086;ERATE=0.0005;THETA=0.0011;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16710545 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0047;AVGPOST=0.9992;RSQ=0.9248;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16710651 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4913;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16710861 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0095;AVGPOST=0.9993;RSQ=0.9704;ERATE=0.0003;THETA=0.0007;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 16711053 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.4734;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16711135 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0277;AVGPOST=0.9993;RSQ=0.9885;ERATE=0.0003;THETA=0.0007;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 16711201 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16711355 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.656;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4330;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16711380 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0518;AVGPOST=0.9995;RSQ=0.9959;ERATE=0.0003;THETA=0.0004;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 16711417 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0322;AVGPOST=0.9987;RSQ=0.9871;ERATE=0.0004;THETA=0.0010;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 16711509 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7309;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16711597 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0023;AVGPOST=0.9984;RSQ=0.7438;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16711734 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0275;AVGPOST=0.9996;RSQ=0.9936;ERATE=0.0003;THETA=0.0005;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 16711745 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0030;AVGPOST=0.9989;RSQ=0.8400;ERATE=0.0003;THETA=0.0012;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16711751 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0029;AVGPOST=0.9998;RSQ=0.9618;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16711815 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0519;AVGPOST=0.9988;RSQ=0.9898;ERATE=0.0004;THETA=0.0009;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 16711823 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0515;AVGPOST=0.9995;RSQ=0.9956;ERATE=0.0003;THETA=0.0006;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 16711877 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8639;ERATE=0.0010;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16711912 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0106;AVGPOST=0.9995;RSQ=0.9823;ERATE=0.0003;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 16712074 . A ACGTT 474 PASS INDEL;BAVGPOST=0.999;BRSQ=0.824;LDAF=0.0033;AVGPOST=0.9980;RSQ=0.7484;ERATE=0.0004;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16712102 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.781;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16712110 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9914;ERATE=0.0003;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16712217 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.532;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16712265 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 16712304 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7916;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16712457 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6437;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16712642 . GC G 2318 PASS INDEL;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0094;AVGPOST=0.9995;RSQ=0.9767;ERATE=0.0005;THETA=0.0010;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 16712670 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0065;AVGPOST=0.9996;RSQ=0.9733;ERATE=0.0003;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 16712718 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0050;AVGPOST=0.9985;RSQ=0.8923;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16712720 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0091;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0015;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 16712740 . AG A 381 PASS INDEL;BAVGPOST=0.999;BRSQ=0.791;LDAF=0.0032;AVGPOST=0.9985;RSQ=0.8150;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16712996 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.734;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8541;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16712999 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7210;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16713030 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0316;AVGPOST=0.9998;RSQ=0.9975;ERATE=0.0003;THETA=0.0008;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 16713063 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0275;AVGPOST=0.9989;RSQ=0.9877;ERATE=0.0004;THETA=0.0008;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 16713100 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5758;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16713115 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.845;LDAF=0.0027;AVGPOST=0.9981;RSQ=0.7067;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16713351 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6904;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16713542 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0046;AVGPOST=0.9996;RSQ=0.9688;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16713555 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0513;AVGPOST=0.9994;RSQ=0.9946;ERATE=0.0004;THETA=0.0003;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 16713572 . ATGTC A 210 PASS INDEL;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7683;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16713695 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8815;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16713700 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0316;AVGPOST=0.9998;RSQ=0.9969;ERATE=0.0004;THETA=0.0007;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 16713764 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0065;AVGPOST=0.9990;RSQ=0.9469;ERATE=0.0004;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 16713789 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16713870 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0061;AVGPOST=0.9977;RSQ=0.8531;ERATE=0.0004;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 16713906 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16713964 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0316;AVGPOST=0.9998;RSQ=0.9969;ERATE=0.0004;THETA=0.0007;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 16714021 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0271;AVGPOST=0.9998;RSQ=0.9970;ERATE=0.0003;THETA=0.0006;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 16714038 . AG A 423 PASS INDEL;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0034;AVGPOST=0.9986;RSQ=0.8496;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16714095 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0516;AVGPOST=0.9996;RSQ=0.9963;ERATE=0.0003;THETA=0.0005;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 16714100 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5898;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16714168 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6898;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16714201 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0159;AVGPOST=0.9990;RSQ=0.9743;ERATE=0.0003;THETA=0.0006;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 16714317 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0027;AVGPOST=1.0000;RSQ=0.9920;ERATE=0.0003;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16714373 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0029;AVGPOST=0.9998;RSQ=0.9618;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16714390 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.5354;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16714399 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16714461 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8198;ERATE=0.0004;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16714493 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.8998;ERATE=0.0004;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16714626 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0521;AVGPOST=0.9990;RSQ=0.9901;ERATE=0.0006;THETA=0.0004;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 16714627 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.6650;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16714683 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.652;LDAF=0.0069;AVGPOST=0.9926;RSQ=0.5555;ERATE=0.0008;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16714718 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.8938;ERATE=0.0004;THETA=0.0025;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16714756 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0341;AVGPOST=0.9961;RSQ=0.9563;ERATE=0.0008;THETA=0.0006;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 16714784 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0069;AVGPOST=0.9989;RSQ=0.9285;ERATE=0.0004;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 16714817 . ACTC A 35 PASS INDEL;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.5964;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16714888 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.924;LDAF=0.0074;AVGPOST=0.9984;RSQ=0.9229;ERATE=0.0004;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 16714900 rs113394632 CAAATATAT C 15769 PASS INDEL;BAVGPOST=0.989;BRSQ=0.958;LDAF=0.1184;AVGPOST=0.9941;RSQ=0.9805;ERATE=0.0009;THETA=0.0003;AC=257;AN=2184 GT:DS:GL:BD 0.11767399 0
1 16714963 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0042;AVGPOST=0.9974;RSQ=0.7501;ERATE=0.0008;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16714974 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0317;AVGPOST=0.9994;RSQ=0.9917;ERATE=0.0004;THETA=0.0006;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 16714984 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.984;LDAF=0.1691;AVGPOST=0.9919;RSQ=0.9780;ERATE=0.0016;THETA=0.0007;AC=369;AN=2184 GT:DS:GL:BD 0.16895604 0
1 16715063 . TACTG T 47 PASS INDEL;BAVGPOST=1.000;BRSQ=0.686;LDAF=0.0015;AVGPOST=0.9981;RSQ=0.4406;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16715466 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1667;AVGPOST=0.9959;RSQ=0.9888;ERATE=0.0006;THETA=0.0005;AC=364;AN=2184 GT:DS:GL:BD 0.16666667 0
1 16715509 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0025;AVGPOST=0.9992;RSQ=0.8760;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16715545 . T TGCA 164 PASS INDEL;BAVGPOST=0.999;BRSQ=0.651;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6237;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16715610 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.919;LDAF=0.0406;AVGPOST=0.9714;RSQ=0.7229;ERATE=0.0017;THETA=0.0007;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 16715770 . GT G 568 PASS INDEL;BAVGPOST=0.865;BRSQ=0.471;LDAF=0.1848;AVGPOST=0.8230;RSQ=0.5477;ERATE=0.0151;THETA=0.0004;AC=295;AN=2184 GT:DS:GL:BD 0.13507326 0
1 16715771 . TG T 854 PASS INDEL;BAVGPOST=0.874;BRSQ=0.533;LDAF=0.2354;AVGPOST=0.7650;RSQ=0.4754;ERATE=0.0196;THETA=0.0004;AC=353;AN=2184 GT:DS:GL:BD 0.16163003 0
1 16715774 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.304;LDAF=0.0275;AVGPOST=0.9563;RSQ=0.3528;ERATE=0.0034;THETA=0.0008;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 16715775 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.919;LDAF=0.0302;AVGPOST=0.9926;RSQ=0.9100;ERATE=0.0007;THETA=0.0005;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 16715820 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.934;LDAF=0.0387;AVGPOST=0.9857;RSQ=0.8480;ERATE=0.0011;THETA=0.0005;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 16715829 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.497;LDAF=0.0560;AVGPOST=0.9332;RSQ=0.4830;ERATE=0.0053;THETA=0.0006;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 16715850 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0332;AVGPOST=0.9965;RSQ=0.9590;ERATE=0.0007;THETA=0.0005;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 16715883 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.964;LDAF=0.0351;AVGPOST=0.9882;RSQ=0.8776;ERATE=0.0011;THETA=0.0006;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 16716028 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.825;LDAF=0.0315;AVGPOST=0.9814;RSQ=0.7738;ERATE=0.0024;THETA=0.0009;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 16716048 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.975;LDAF=0.0116;AVGPOST=0.9959;RSQ=0.8669;ERATE=0.0004;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 16716281 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.4970;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16716374 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7215;AVGPOST=0.9932;RSQ=0.9860;ERATE=0.0008;THETA=0.0008;AC=1577;AN=2184 GT:DS:GL:BD 0.72206962 1
1 16716398 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6025;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16716467 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8821;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16716477 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.901;LDAF=0.0070;AVGPOST=0.9978;RSQ=0.8713;ERATE=0.0003;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 16716495 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1062;AVGPOST=0.9992;RSQ=0.9966;ERATE=0.0003;THETA=0.0004;AC=231;AN=2184 GT:DS:GL:BD 0.10576923 0
1 16716532 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.5235;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16716624 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0076;AVGPOST=0.9994;RSQ=0.9690;ERATE=0.0003;THETA=0.0012;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 16716697 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9545;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16716821 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16716917 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5966;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16716965 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0038;AVGPOST=0.9995;RSQ=0.9442;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16717005 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6425;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16717120 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1610;AVGPOST=0.9976;RSQ=0.9923;ERATE=0.0005;THETA=0.0004;AC=353;AN=2184 GT:DS:GL:BD 0.16163003 0
1 16717145 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0079;AVGPOST=0.9997;RSQ=0.9806;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 16717197 . A AG 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6602;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16717231 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0092;AVGPOST=1.0000;RSQ=0.9978;ERATE=0.0003;THETA=0.0010;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 16717313 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9771;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16717382 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.8015;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16717481 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0004;AVGPOST=0.9996;RSQ=0.6185;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16717685 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.915;LDAF=0.0149;AVGPOST=0.9989;RSQ=0.9706;ERATE=0.0003;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 16717700 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8938;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16717744 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16717764 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.8045;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16717812 . C CT 284 PASS INDEL;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8767;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16717999 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9361;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16718037 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0076;AVGPOST=0.9994;RSQ=0.9643;ERATE=0.0004;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 16718092 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6037;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16718621 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0119;AVGPOST=0.9994;RSQ=0.9779;ERATE=0.0003;THETA=0.0008;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 16718719 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7530;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16718758 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0066;AVGPOST=0.9997;RSQ=0.9779;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 16718796 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0031;AVGPOST=0.9990;RSQ=0.8766;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16718983 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0199;AVGPOST=0.9995;RSQ=0.9897;ERATE=0.0004;THETA=0.0005;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 16718984 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0013;AVGPOST=0.9994;RSQ=0.8185;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16718994 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5174;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16718996 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.884;LDAF=0.0383;AVGPOST=0.9897;RSQ=0.8949;ERATE=0.0006;THETA=0.0006;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 16719355 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16719374 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16719379 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0316;AVGPOST=0.9998;RSQ=0.9975;ERATE=0.0003;THETA=0.0003;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 16719496 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16719536 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0516;AVGPOST=1.0000;RSQ=0.9996;ERATE=0.0003;THETA=0.0005;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 16719551 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16719723 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6853;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16719805 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16719848 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16719900 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9553;ERATE=0.0003;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16719972 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6674;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16720074 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9437;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16720094 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16720100 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9282;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16720112 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.3024;AVGPOST=0.9984;RSQ=0.9969;ERATE=0.0003;THETA=0.0005;AC=661;AN=2184 GT:DS:GL:BD 0.30265567 0
1 16720117 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0144;AVGPOST=0.9992;RSQ=0.9737;ERATE=0.0004;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 16720131 . G GC 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.731;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4822;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16720143 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0328;AVGPOST=0.9988;RSQ=0.9846;ERATE=0.0003;THETA=0.0003;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 16720206 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1131;AVGPOST=0.9993;RSQ=0.9973;ERATE=0.0004;THETA=0.0006;AC=246;AN=2184 GT:DS:GL:BD 0.11263736 0
1 16720213 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16720214 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9829;ERATE=0.0003;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16720311 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16720365 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0092;AVGPOST=0.9999;RSQ=0.9935;ERATE=0.0003;THETA=0.0007;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 16720399 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4179;AVGPOST=0.9956;RSQ=0.9939;ERATE=0.0006;THETA=0.0006;AC=910;AN=2184 GT:DS:GL:BD 0.41666666 0
1 16720445 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0319;AVGPOST=0.9993;RSQ=0.9913;ERATE=0.0003;THETA=0.0006;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 16720490 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9882;ERATE=0.0003;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16720675 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4417;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16720823 . AT A 82 PASS INDEL;BAVGPOST=0.999;BRSQ=0.647;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.5488;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16720934 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=0.9998;RSQ=0.9863;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 16721176 . A AG 46 PASS INDEL;BAVGPOST=0.998;BRSQ=0.860;LDAF=0.0053;AVGPOST=0.9944;RSQ=0.6004;ERATE=0.0005;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16721187 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0072;AVGPOST=0.9987;RSQ=0.9344;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 16721263 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.950;LDAF=0.0206;AVGPOST=0.9988;RSQ=0.9741;ERATE=0.0004;THETA=0.0018;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 16721342 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0179;AVGPOST=0.9998;RSQ=0.9954;ERATE=0.0003;THETA=0.0005;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 16721385 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9997;RSQ=0.9829;ERATE=0.0003;THETA=0.0018;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 16721416 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0103;AVGPOST=0.9995;RSQ=0.9821;ERATE=0.0003;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 16721463 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.9309;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16721479 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16721523 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 16721558 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0001;AVGPOST=0.9998;RSQ=0.0498;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 16721579 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16721674 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.771;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16721797 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.832;LDAF=0.0033;AVGPOST=0.9988;RSQ=0.8566;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16721849 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0071;AVGPOST=0.9987;RSQ=0.9435;ERATE=0.0004;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16721850 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.603;LDAF=0.0016;AVGPOST=0.9980;RSQ=0.4751;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16721926 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5968;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16722200 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5321;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16722304 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0101;AVGPOST=0.9972;RSQ=0.9002;ERATE=0.0004;THETA=0.0009;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 16722333 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0319;AVGPOST=0.9989;RSQ=0.9855;ERATE=0.0004;THETA=0.0004;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 16722433 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7531;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16722493 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.559;LDAF=0.0015;AVGPOST=0.9990;RSQ=0.7253;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16722501 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0023;AVGPOST=0.9973;RSQ=0.5329;ERATE=0.0005;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16722658 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8692;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16722691 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16722692 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0290;AVGPOST=0.9986;RSQ=0.9799;ERATE=0.0004;THETA=0.0008;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 16722842 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16722927 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0182;AVGPOST=0.9993;RSQ=0.9845;ERATE=0.0003;THETA=0.0005;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 16722934 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0519;AVGPOST=0.9993;RSQ=0.9937;ERATE=0.0003;THETA=0.0005;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 16723024 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.826;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9144;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16723083 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0032;AVGPOST=0.9985;RSQ=0.8082;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16723084 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.4087;AVGPOST=0.9951;RSQ=0.9925;ERATE=0.0010;THETA=0.0007;AC=890;AN=2184 GT:DS:GL:BD 0.40750915 0
1 16723139 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0518;AVGPOST=0.9994;RSQ=0.9952;ERATE=0.0003;THETA=0.0002;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 16723163 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0102;AVGPOST=0.9996;RSQ=0.9845;ERATE=0.0004;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 16723251 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0093;AVGPOST=0.9985;RSQ=0.9167;ERATE=0.0004;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 16723268 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.987;LDAF=0.1228;AVGPOST=0.9983;RSQ=0.9937;ERATE=0.0005;THETA=0.0007;AC=268;AN=2184 GT:DS:GL:BD 0.12271062 0
1 16723375 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9670;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16723419 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7529;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16723428 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0197;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 16723487 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0179;AVGPOST=0.9997;RSQ=0.9932;ERATE=0.0003;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 16723552 . C CT 4424 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0200;AVGPOST=0.9994;RSQ=0.9850;ERATE=0.0004;THETA=0.0007;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 16723566 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.6562;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16723588 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8346;ERATE=0.0003;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16723598 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5826;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16723602 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0083;AVGPOST=0.9990;RSQ=0.9528;ERATE=0.0004;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 16723713 . AG A 68 PASS INDEL;BAVGPOST=0.999;BRSQ=0.643;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5593;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16723759 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6392;ERATE=0.0005;THETA=0.0032;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16723971 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6518;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16724132 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.5848;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16724760 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0084;AVGPOST=0.9988;RSQ=0.9524;ERATE=0.0005;THETA=0.0007;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 16724776 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.777;LDAF=0.0029;AVGPOST=0.9984;RSQ=0.7870;ERATE=0.0005;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16724786 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.703;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5552;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16724901 . GGA G 11 PASS INDEL;BAVGPOST=0.998;BRSQ=0.370;LDAF=0.0015;AVGPOST=0.9981;RSQ=0.5132;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16724946 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.663;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6402;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16725037 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16725219 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16725220 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16725270 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16725271 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0110;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 16725322 . GGA G 6361 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0331;AVGPOST=0.9976;RSQ=0.9722;ERATE=0.0006;THETA=0.0003;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 16725330 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0740;AVGPOST=0.9999;RSQ=0.9994;ERATE=0.0003;THETA=0.0009;AC=162;AN=2184 GT:DS:GL:BD 0.07417583 0
1 16725366 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8190;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16725395 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16725407 . G GGA 220 PASS INDEL;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0034;AVGPOST=0.9946;RSQ=0.3272;ERATE=0.0009;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16725497 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16725523 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8305;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16725615 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16725686 . GTCT G 327 PASS INDEL;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8869;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16725798 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16725818 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0932;AVGPOST=0.9999;RSQ=0.9995;ERATE=0.0003;THETA=0.0004;AC=203;AN=2184 GT:DS:GL:BD 0.09294872 0
1 16725831 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16725882 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16725897 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16725919 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0096;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0008;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 16725932 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16725973 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16726036 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0517;AVGPOST=1.0000;RSQ=0.9996;ERATE=0.0003;THETA=0.0005;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 16726040 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0027;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16726098 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16726099 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16726138 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16726167 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0315;AVGPOST=0.9998;RSQ=0.9976;ERATE=0.0003;THETA=0.0006;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 16726305 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1117;AVGPOST=0.9988;RSQ=0.9963;ERATE=0.0003;THETA=0.0007;AC=243;AN=2184 GT:DS:GL:BD 0.11126374 0
1 16726393 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8255;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16726412 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7290;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16726445 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6328;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16726519 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0102;AVGPOST=0.9997;RSQ=0.9883;ERATE=0.0003;THETA=0.0008;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 16726527 rs111714606 G GT 2372 PASS INDEL;BAVGPOST=0.926;BRSQ=0.598;LDAF=0.1397;AVGPOST=0.8713;RSQ=0.5579;ERATE=0.0457;THETA=0.0004;AC=200;AN=2184 GT:DS:GL:BD 0.09157509 0
1 16726754 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0027;AVGPOST=0.9958;RSQ=0.4195;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16726833 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9882;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16726857 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0003;THETA=0.0011;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16726860 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6383;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16726902 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0511;AVGPOST=0.9993;RSQ=0.9948;ERATE=0.0003;THETA=0.0004;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 16726909 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.7099;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16727014 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16727077 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16727078 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16727087 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16727187 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16727235 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9181;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16727294 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0027;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16727305 rs80260069 G GCTT 15861 PASS INDEL;BAVGPOST=0.992;BRSQ=0.968;LDAF=0.1133;AVGPOST=0.9987;RSQ=0.9955;ERATE=0.0004;THETA=0.0006;AC=246;AN=2184 GT:DS:GL:BD 0.11263736 0
1 16727344 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16727361 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16727434 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16727436 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16727456 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.786;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.7077;ERATE=0.0015;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16727630 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16727649 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0198;AVGPOST=0.9998;RSQ=0.9946;ERATE=0.0004;THETA=0.0004;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 16727727 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7011;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16727735 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6265;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16727774 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7640;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16727797 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0003;AVGPOST=0.9994;RSQ=0.3710;ERATE=0.0003;THETA=0.0017;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 16727982 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8364;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16728016 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7607;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16728043 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0515;AVGPOST=0.9992;RSQ=0.9940;ERATE=0.0004;THETA=0.0005;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 16728055 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0103;AVGPOST=0.9985;RSQ=0.9447;ERATE=0.0005;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 16728189 . A ACT 17249 PASS INDEL;BAVGPOST=0.993;BRSQ=0.974;LDAF=0.1146;AVGPOST=0.9961;RSQ=0.9863;ERATE=0.0005;THETA=0.0005;AC=246;AN=2184 GT:DS:GL:BD 0.11263736 0
1 16728204 . ATCT A 123 PASS INDEL;BAVGPOST=0.999;BRSQ=0.540;LDAF=0.0017;AVGPOST=0.9977;RSQ=0.4894;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16728339 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1681;AVGPOST=0.9980;RSQ=0.9941;ERATE=0.0003;THETA=0.0008;AC=366;AN=2184 GT:DS:GL:BD 0.16758242 0
1 16728363 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16728441 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.4176;AVGPOST=0.9973;RSQ=0.9963;ERATE=0.0005;THETA=0.0003;AC=911;AN=2184 GT:DS:GL:BD 0.41712454 0
1 16728502 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0518;AVGPOST=0.9984;RSQ=0.9867;ERATE=0.0003;THETA=0.0004;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 16728506 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5052;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16728518 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.995;LDAF=0.4129;AVGPOST=0.9953;RSQ=0.9938;ERATE=0.0006;THETA=0.0040;AC=900;AN=2184 GT:DS:GL:BD 0.41208792 0
1 16728519 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.755;LDAF=0.0356;AVGPOST=0.9687;RSQ=0.6584;ERATE=0.0067;THETA=0.0007;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 16728658 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.986;LDAF=0.0179;AVGPOST=0.9975;RSQ=0.9523;ERATE=0.0004;THETA=0.0024;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 16728838 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.736;LDAF=0.0021;AVGPOST=0.9968;RSQ=0.3517;ERATE=0.0006;THETA=0.0074;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16728881 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.902;LDAF=0.0237;AVGPOST=0.9926;RSQ=0.8823;ERATE=0.0011;THETA=0.0005;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 16728897 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.758;LDAF=0.0031;AVGPOST=0.9955;RSQ=0.4377;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16728937 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.937;LDAF=0.1182;AVGPOST=0.9891;RSQ=0.9646;ERATE=0.0013;THETA=0.0006;AC=255;AN=2184 GT:DS:GL:BD 0.11675824 0
1 16728973 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.967;BRSQ=0.810;LDAF=0.0823;AVGPOST=0.9824;RSQ=0.9088;ERATE=0.0010;THETA=0.0007;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 16728991 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0021;AVGPOST=0.9971;RSQ=0.4400;ERATE=0.0006;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16728992 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.709;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.3571;ERATE=0.0006;THETA=0.0066;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16728999 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.819;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.5922;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16729115 . CA C 9816 PASS INDEL;BAVGPOST=0.958;BRSQ=0.932;LDAF=0.4970;AVGPOST=0.9319;RSQ=0.9028;ERATE=0.0104;THETA=0.0004;AC=1099;AN=2184 GT:DS:GL:BD 0.50320512 1
1 16729116 rs76917014 AT A 37713 PASS INDEL;BAVGPOST=0.969;BRSQ=0.951;LDAF=0.5228;AVGPOST=0.9785;RSQ=0.9669;ERATE=0.0019;THETA=0.0012;AC=1146;AN=2184 GT:DS:GL:BD 0.52472526 1
1 16729191 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.988;LDAF=0.4209;AVGPOST=0.9951;RSQ=0.9937;ERATE=0.0005;THETA=0.0006;AC=916;AN=2184 GT:DS:GL:BD 0.41941392 0
1 16729205 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.994;LDAF=0.4247;AVGPOST=0.9941;RSQ=0.9926;ERATE=0.0007;THETA=0.0030;AC=925;AN=2184 GT:DS:GL:BD 0.42353481 0
1 16729384 . ACACTT A 183 PASS INDEL;BAVGPOST=1.000;BRSQ=0.771;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6282;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16729389 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.971;LDAF=0.5111;AVGPOST=0.9803;RSQ=0.9709;ERATE=0.0032;THETA=0.0011;AC=1122;AN=2184 GT:DS:GL:BD 0.51373625 1
1 16729400 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.920;LDAF=0.0144;AVGPOST=0.9979;RSQ=0.9379;ERATE=0.0004;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 16729588 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2157;AVGPOST=0.9994;RSQ=0.9984;ERATE=0.0003;THETA=0.0004;AC=472;AN=2184 GT:DS:GL:BD 0.21611722 0
1 16729593 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9260;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16729608 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5287;AVGPOST=0.9995;RSQ=0.9991;ERATE=0.0004;THETA=0.0003;AC=1153;AN=2184 GT:DS:GL:BD 0.52793038 1
1 16729648 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16729700 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5289;AVGPOST=0.9984;RSQ=0.9973;ERATE=0.0006;THETA=0.0005;AC=1153;AN=2184 GT:DS:GL:BD 0.52793038 1
1 16729980 . T TTTTC 1035 PASS INDEL;BAVGPOST=0.990;BRSQ=0.842;LDAF=0.0445;AVGPOST=0.9639;RSQ=0.6888;ERATE=0.0037;THETA=0.0004;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 16729981 . T TTC 2057 PASS INDEL;BAVGPOST=0.990;BRSQ=0.885;LDAF=0.0458;AVGPOST=0.9957;RSQ=0.9649;ERATE=0.0005;THETA=0.0002;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 16729982 . T TC 1616 PASS INDEL;BAVGPOST=0.991;BRSQ=0.886;LDAF=0.0459;AVGPOST=0.9946;RSQ=0.9555;ERATE=0.0003;THETA=0.0004;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 16729987 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.937;BRSQ=0.889;LDAF=0.4726;AVGPOST=0.9251;RSQ=0.8921;ERATE=0.0224;THETA=0.0008;AC=1050;AN=2184 GT:DS:GL:BD 0.48076922 0
1 16730074 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0252;AVGPOST=0.9996;RSQ=0.9925;ERATE=0.0003;THETA=0.0006;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 16730209 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16730210 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16730276 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16730281 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16730308 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0570;AVGPOST=0.9994;RSQ=0.9951;ERATE=0.0007;THETA=0.0002;AC=124;AN=2184 GT:DS:GL:BD 0.05677656 0
1 16730403 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16730413 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0480;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 16730419 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16730423 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0046;AVGPOST=1.0000;RSQ=0.9952;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16730441 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9763;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16730582 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4255;AVGPOST=0.9990;RSQ=0.9984;ERATE=0.0003;THETA=0.0009;AC=927;AN=2184 GT:DS:GL:BD 0.42445055 0
1 16730602 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0080;AVGPOST=0.9996;RSQ=0.9763;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 16730768 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0063;AVGPOST=0.9992;RSQ=0.9552;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 16730944 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0022;AVGPOST=0.9974;RSQ=0.5439;ERATE=0.0007;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16730978 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.827;LDAF=0.0029;AVGPOST=0.9983;RSQ=0.7653;ERATE=0.0006;THETA=0.0024;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16731120 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8757;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16731133 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0036;AVGPOST=0.9982;RSQ=0.8433;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16731182 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16731191 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0469;AVGPOST=0.9993;RSQ=0.9949;ERATE=0.0003;THETA=0.0005;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 16731276 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5284;AVGPOST=0.9995;RSQ=0.9993;ERATE=0.0003;THETA=0.0004;AC=1152;AN=2184 GT:DS:GL:BD 0.52747256 1
1 16731348 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16731449 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0046;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16731492 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0037;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16731510 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2157;AVGPOST=0.9998;RSQ=0.9994;ERATE=0.0003;THETA=0.0006;AC=472;AN=2184 GT:DS:GL:BD 0.21611722 0
1 16731572 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16731594 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16731609 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0096;AVGPOST=0.9999;RSQ=0.9954;ERATE=0.0003;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 16731619 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0252;AVGPOST=0.9999;RSQ=0.9984;ERATE=0.0003;THETA=0.0003;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 16731646 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.939;LDAF=0.9370;AVGPOST=0.9897;RSQ=0.9439;ERATE=0.0040;THETA=0.0005;AC=2049;AN=2184 GT:DS:GL:BD 0.93818682 1
1 16731647 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.973;LDAF=0.4753;AVGPOST=0.9801;RSQ=0.9732;ERATE=0.0145;THETA=0.0003;AC=1040;AN=2184 GT:DS:GL:BD 0.47619048 0
1 16731653 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4206;AVGPOST=0.9994;RSQ=0.9992;ERATE=0.0003;THETA=0.0031;AC=917;AN=2184 GT:DS:GL:BD 0.41987181 0
1 16731661 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5278;AVGPOST=0.9990;RSQ=0.9986;ERATE=0.0003;THETA=0.0009;AC=1151;AN=2184 GT:DS:GL:BD 0.52701467 1
1 16731679 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6160;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16731756 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0467;AVGPOST=0.9996;RSQ=0.9960;ERATE=0.0003;THETA=0.0002;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 16731796 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.587;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16731842 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6736;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16731863 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5387;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16731940 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.809;LDAF=0.0028;AVGPOST=0.9970;RSQ=0.5285;ERATE=0.0010;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16731976 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.791;LDAF=0.0026;AVGPOST=0.9978;RSQ=0.6980;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16731997 . A AAC 1816 PASS INDEL;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0248;AVGPOST=0.9969;RSQ=0.9548;ERATE=0.0004;THETA=0.0005;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 16732001 . A AC 99 PASS INDEL;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0057;AVGPOST=0.9965;RSQ=0.7353;ERATE=0.0010;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16732026 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.946;BRSQ=0.766;LDAF=0.8842;AVGPOST=0.9259;RSQ=0.7350;ERATE=0.0116;THETA=0.0004;AC=1978;AN=2184 GT:DS:GL:BD 0.90567768 1
1 16732147 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0018;AVGPOST=0.9998;RSQ=0.9394;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16732192 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1691;AVGPOST=0.9990;RSQ=0.9974;ERATE=0.0003;THETA=0.0004;AC=369;AN=2184 GT:DS:GL:BD 0.16895604 0
1 16732219 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0466;AVGPOST=0.9997;RSQ=0.9968;ERATE=0.0003;THETA=0.0002;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 16732240 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16732518 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5271;AVGPOST=0.9977;RSQ=0.9961;ERATE=0.0007;THETA=0.0003;AC=1150;AN=2184 GT:DS:GL:BD 0.52655679 1
1 16732558 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9396;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16732585 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.772;LDAF=0.0024;AVGPOST=0.9985;RSQ=0.7537;ERATE=0.0003;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16732618 . C CT 598 PASS INDEL;BAVGPOST=0.927;BRSQ=0.508;LDAF=0.1320;AVGPOST=0.8559;RSQ=0.4626;ERATE=0.0478;THETA=0.0015;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 16732860 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5285;AVGPOST=0.9978;RSQ=0.9964;ERATE=0.0005;THETA=0.0007;AC=1152;AN=2184 GT:DS:GL:BD 0.52747256 1
1 16732866 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16732938 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.963;LDAF=0.0274;AVGPOST=0.9978;RSQ=0.9652;ERATE=0.0003;THETA=0.0003;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 16732981 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0054;AVGPOST=0.9963;RSQ=0.7563;ERATE=0.0004;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16733077 rs6143138 AATTTTAGAAAT A 62297 PASS INDEL;BAVGPOST=0.992;BRSQ=0.988;LDAF=0.4189;AVGPOST=0.9935;RSQ=0.9905;ERATE=0.0010;THETA=0.0098;AC=915;AN=2184 GT:DS:GL:BD 0.41895604 0
1 16733118 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4944;ERATE=0.0004;THETA=0.0045;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16733236 . C CAAAT 147 PASS INDEL;BAVGPOST=0.998;BRSQ=0.753;LDAF=0.0031;AVGPOST=0.9973;RSQ=0.6177;ERATE=0.0007;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16733266 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9690;ERATE=0.0003;THETA=0.0098;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16733276 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9812;ERATE=0.0003;THETA=0.0053;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16733295 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16733349 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.755;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.5106;ERATE=0.0004;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16733351 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0063;AVGPOST=0.9981;RSQ=0.8965;ERATE=0.0003;THETA=0.0023;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 16733391 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.880;LDAF=0.0026;AVGPOST=0.9992;RSQ=0.8630;ERATE=0.0006;THETA=0.0056;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16733428 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0060;AVGPOST=0.9986;RSQ=0.9076;ERATE=0.0004;THETA=0.0024;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 16733486 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.726;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16733525 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9282;ERATE=0.0003;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16733541 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.926;LDAF=0.0152;AVGPOST=0.9979;RSQ=0.9418;ERATE=0.0004;THETA=0.0040;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 16733553 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5610;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16733604 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7258;ERATE=0.0003;THETA=0.0043;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16733623 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0020;AVGPOST=0.9994;RSQ=0.8742;ERATE=0.0003;THETA=0.0073;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16733702 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.671;LDAF=0.0006;AVGPOST=0.9989;RSQ=0.2463;ERATE=0.0005;THETA=0.0026;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 16733757 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.5302;ERATE=0.0003;THETA=0.0071;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16733993 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.798;LDAF=0.0015;AVGPOST=0.9981;RSQ=0.5564;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16734088 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.975;LDAF=0.0282;AVGPOST=0.9965;RSQ=0.9593;ERATE=0.0004;THETA=0.0053;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 16734133 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.733;LDAF=0.0042;AVGPOST=0.9984;RSQ=0.8360;ERATE=0.0005;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16734176 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0069;AVGPOST=0.9989;RSQ=0.9292;ERATE=0.0004;THETA=0.0070;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 16734186 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.688;LDAF=0.0028;AVGPOST=0.9969;RSQ=0.5932;ERATE=0.0005;THETA=0.0032;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16734338 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.6099;ERATE=0.0003;THETA=0.0043;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16734436 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.971;LDAF=0.4203;AVGPOST=0.9734;RSQ=0.9672;ERATE=0.0043;THETA=0.0082;AC=911;AN=2184 GT:DS:GL:BD 0.41712454 0
1 16734499 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.676;LDAF=0.0024;AVGPOST=0.9978;RSQ=0.6259;ERATE=0.0005;THETA=0.0021;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16734527 rs77942074 GC G 33108 PASS INDEL;BAVGPOST=0.974;BRSQ=0.962;LDAF=0.4312;AVGPOST=0.9367;RSQ=0.9153;ERATE=0.0162;THETA=0.0007;AC=947;AN=2184 GT:DS:GL:BD 0.43360806 0
1 16734546 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.728;LDAF=0.0047;AVGPOST=0.9984;RSQ=0.8728;ERATE=0.0004;THETA=0.0020;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16734584 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.989;LDAF=0.4592;AVGPOST=0.9928;RSQ=0.9904;ERATE=0.0004;THETA=0.0006;AC=1001;AN=2184 GT:DS:GL:BD 0.45833334 0
1 16734627 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.984;LDAF=0.4673;AVGPOST=0.9909;RSQ=0.9875;ERATE=0.0010;THETA=0.0042;AC=1021;AN=2184 GT:DS:GL:BD 0.46749085 0
1 16734656 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0075;AVGPOST=0.9970;RSQ=0.8715;ERATE=0.0006;THETA=0.0020;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 16734949 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5525;ERATE=0.0003;THETA=0.0057;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16735221 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.840;LDAF=0.0171;AVGPOST=0.9927;RSQ=0.8268;ERATE=0.0005;THETA=0.0009;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 16735225 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0017;AVGPOST=0.9988;RSQ=0.7029;ERATE=0.0005;THETA=0.0170;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16735409 . C CA 1032 PASS INDEL;BAVGPOST=0.807;BRSQ=0.586;LDAF=0.2670;AVGPOST=0.8302;RSQ=0.6819;ERATE=0.0149;THETA=0.0032;AC=535;AN=2184 GT:DS:GL:BD 0.24496336 0
1 16735451 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16735613 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16735738 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0137;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16735761 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0058;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16735764 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0079;AVGPOST=0.9992;RSQ=0.9587;ERATE=0.0005;THETA=0.0009;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 16736088 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16736091 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.674;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7386;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16736096 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0019;AVGPOST=0.9994;RSQ=0.8754;ERATE=0.0003;THETA=0.0030;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16736097 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0055;AVGPOST=0.9994;RSQ=0.9583;ERATE=0.0004;THETA=0.0131;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 16736132 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2008;AVGPOST=0.9986;RSQ=0.9970;ERATE=0.0032;THETA=0.0001;AC=437;AN=2184 GT:DS:GL:BD 0.20009157 0
1 16736138 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0077;AVGPOST=0.9999;RSQ=0.9918;ERATE=0.0004;THETA=0.0032;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 16736216 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16736231 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9931;ERATE=0.0003;THETA=0.0017;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16736268 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7566;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16736272 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0097;AVGPOST=0.9993;RSQ=0.9675;ERATE=0.0003;THETA=0.0013;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 16736326 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0038;AVGPOST=0.9998;RSQ=0.9722;ERATE=0.0003;THETA=0.0011;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16736327 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0320;AVGPOST=0.9999;RSQ=0.9987;ERATE=0.0003;THETA=0.0005;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 16736392 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8540;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16736395 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7189;ERATE=0.0003;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16736407 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16736451 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8063;ERATE=0.0003;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16736526 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0103;AVGPOST=0.9994;RSQ=0.9781;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 16736528 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16736538 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16736546 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.6992;AVGPOST=0.9963;RSQ=0.9936;ERATE=0.0008;THETA=0.0010;AC=1528;AN=2184 GT:DS:GL:BD 0.69963372 1
1 16736738 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2621;AVGPOST=0.9989;RSQ=0.9975;ERATE=0.0004;THETA=0.0015;AC=571;AN=2184 GT:DS:GL:BD 0.26144689 0
1 16737163 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0340;AVGPOST=0.9984;RSQ=0.9793;ERATE=0.0007;THETA=0.0003;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 16737328 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0088;AVGPOST=0.9983;RSQ=0.9234;ERATE=0.0004;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 16737452 . CCT C 281 PASS INDEL;BAVGPOST=0.999;BRSQ=0.810;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7335;ERATE=0.0004;THETA=0.0026;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16737617 . TAA T 231 PASS INDEL;BAVGPOST=0.996;BRSQ=0.575;LDAF=0.0060;AVGPOST=0.9982;RSQ=0.8788;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 16737631 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16737670 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0106;AVGPOST=0.9998;RSQ=0.9896;ERATE=0.0003;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 16737780 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0059;AVGPOST=0.9977;RSQ=0.8321;ERATE=0.0006;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16738050 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.922;BRSQ=0.824;LDAF=0.2803;AVGPOST=0.9628;RSQ=0.9312;ERATE=0.0030;THETA=0.0004;AC=627;AN=2184 GT:DS:GL:BD 0.28708792 0
1 16738138 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.765;LDAF=0.0035;AVGPOST=0.9981;RSQ=0.7709;ERATE=0.0005;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16738239 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.652;LDAF=0.0154;AVGPOST=0.9839;RSQ=0.5758;ERATE=0.0013;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 16738301 . AAAC A 20624 PASS INDEL;BAVGPOST=0.937;BRSQ=0.883;LDAF=0.6876;AVGPOST=0.9552;RSQ=0.9263;ERATE=0.0011;THETA=0.0005;AC=1506;AN=2184 GT:DS:GL:BD 0.68956041 1
1 16738302 . AAC A 23740 PASS INDEL;BAVGPOST=0.938;BRSQ=0.884;LDAF=0.6893;AVGPOST=0.9590;RSQ=0.9332;ERATE=0.0005;THETA=0.0005;AC=1506;AN=2184 GT:DS:GL:BD 0.68956041 1
1 16738303 rs71003283 AC A 24695 PASS INDEL;BAVGPOST=0.938;BRSQ=0.884;LDAF=0.6934;AVGPOST=0.9585;RSQ=0.9314;ERATE=0.0007;THETA=0.0004;AC=1514;AN=2184 GT:DS:GL:BD 0.69322342 1
1 16738337 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16738363 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2613;AVGPOST=0.9979;RSQ=0.9955;ERATE=0.0005;THETA=0.0028;AC=571;AN=2184 GT:DS:GL:BD 0.26144689 0
1 16738372 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9697;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16738390 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1133;AVGPOST=0.9986;RSQ=0.9948;ERATE=0.0004;THETA=0.0005;AC=246;AN=2184 GT:DS:GL:BD 0.11263736 0
1 16738391 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5655;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16738397 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8051;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16738417 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.805;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9019;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16738623 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.0041;AVGPOST=0.9986;RSQ=0.8386;ERATE=0.0005;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16738732 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6142;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16738755 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3304;AVGPOST=0.9970;RSQ=0.9954;ERATE=0.0007;THETA=0.0011;AC=718;AN=2184 GT:DS:GL:BD 0.32875457 0
1 16738764 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.906;LDAF=0.0061;AVGPOST=0.9992;RSQ=0.9418;ERATE=0.0004;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 16738765 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0598;AVGPOST=0.9984;RSQ=0.9895;ERATE=0.0004;THETA=0.0003;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 16738852 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0106;AVGPOST=0.9986;RSQ=0.9487;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 16738913 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6586;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16738944 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9865;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16738959 . CTTTG C 2375 PASS INDEL;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0178;AVGPOST=0.9970;RSQ=0.9419;ERATE=0.0003;THETA=0.0002;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 16738963 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3627;AVGPOST=0.9973;RSQ=0.9961;ERATE=0.0004;THETA=0.0002;AC=794;AN=2184 GT:DS:GL:BD 0.36355311 0
1 16738984 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7362;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16739012 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.883;LDAF=0.0292;AVGPOST=0.9965;RSQ=0.9536;ERATE=0.0003;THETA=0.0003;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 16739021 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8476;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16739106 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.702;LDAF=0.0024;AVGPOST=0.9969;RSQ=0.4483;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16739119 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.778;LDAF=0.0036;AVGPOST=0.9979;RSQ=0.7623;ERATE=0.0005;THETA=0.0019;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16739297 . C CT 78 PASS INDEL;BAVGPOST=0.999;BRSQ=0.724;LDAF=0.0033;AVGPOST=0.9965;RSQ=0.5554;ERATE=0.0009;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16739298 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5273;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16739335 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.6973;ERATE=0.0004;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16739391 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.969;LDAF=0.6864;AVGPOST=0.9858;RSQ=0.9757;ERATE=0.0012;THETA=0.0003;AC=1505;AN=2184 GT:DS:GL:BD 0.68910259 1
1 16739393 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.655;LDAF=0.9762;AVGPOST=0.9815;RSQ=0.7064;ERATE=0.0015;THETA=0.0004;AC=2139;AN=2184 GT:DS:GL:BD 0.97939563 1
1 16739484 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.966;LDAF=0.1614;AVGPOST=0.9939;RSQ=0.9824;ERATE=0.0006;THETA=0.0003;AC=353;AN=2184 GT:DS:GL:BD 0.16163003 0
1 16739495 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.550;LDAF=0.0170;AVGPOST=0.9841;RSQ=0.6599;ERATE=0.0015;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 16739497 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0078;AVGPOST=0.9992;RSQ=0.9596;ERATE=0.0003;THETA=0.0001;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 16739521 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.979;LDAF=0.3570;AVGPOST=0.9844;RSQ=0.9780;ERATE=0.0019;THETA=0.0006;AC=785;AN=2184 GT:DS:GL:BD 0.35943222 0
1 16739696 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3891;AVGPOST=0.9985;RSQ=0.9979;ERATE=0.0005;THETA=0.0005;AC=852;AN=2184 GT:DS:GL:BD 0.39010990 0
1 16739738 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.6507;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16739851 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3639;AVGPOST=0.9987;RSQ=0.9981;ERATE=0.0005;THETA=0.0007;AC=796;AN=2184 GT:DS:GL:BD 0.36446887 0
1 16739854 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0042;AVGPOST=0.9987;RSQ=0.8614;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16739907 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.986;LDAF=0.8151;AVGPOST=0.9943;RSQ=0.9856;ERATE=0.0005;THETA=0.0007;AC=1781;AN=2184 GT:DS:GL:BD 0.81547618 1
1 16739946 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.862;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5858;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16739953 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2629;AVGPOST=0.9969;RSQ=0.9934;ERATE=0.0006;THETA=0.0005;AC=573;AN=2184 GT:DS:GL:BD 0.26236263 0
1 16740020 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.740;LDAF=0.0018;AVGPOST=0.9993;RSQ=0.8545;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16740035 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.2630;AVGPOST=0.9973;RSQ=0.9940;ERATE=0.0007;THETA=0.0004;AC=574;AN=2184 GT:DS:GL:BD 0.26282051 0
1 16740104 rs57895204 T TTTTTC 5894 PASS INDEL;BAVGPOST=0.984;BRSQ=0.849;LDAF=0.0561;AVGPOST=0.9867;RSQ=0.9167;ERATE=0.0013;THETA=0.0006;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 16740122 . T TTC 533 PASS INDEL;BAVGPOST=0.982;BRSQ=0.799;LDAF=0.0484;AVGPOST=0.9881;RSQ=0.9080;ERATE=0.0006;THETA=0.0008;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 16740170 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.667;LDAF=0.0032;AVGPOST=0.9976;RSQ=0.7151;ERATE=0.0004;THETA=0.0039;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16740229 . T TC 25 PASS INDEL;BAVGPOST=0.987;BRSQ=0.496;LDAF=0.0148;AVGPOST=0.9841;RSQ=0.5941;ERATE=0.0013;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 16740255 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0338;AVGPOST=0.9991;RSQ=0.9880;ERATE=0.0004;THETA=0.0010;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 16740267 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0053;AVGPOST=0.9987;RSQ=0.9076;ERATE=0.0004;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16740356 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.680;LDAF=0.0019;AVGPOST=0.9969;RSQ=0.2778;ERATE=0.0007;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16740359 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.673;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7679;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16740415 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5229;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16740502 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0002;AVGPOST=0.9997;RSQ=0.1053;ERATE=0.0003;THETA=0.0013;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 16740510 rs34726819 G GT 9260 PASS INDEL;BAVGPOST=0.982;BRSQ=0.919;LDAF=0.1081;AVGPOST=0.9831;RSQ=0.9315;ERATE=0.0035;THETA=0.0007;AC=231;AN=2184 GT:DS:GL:BD 0.10576923 0
1 16740545 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0075;AVGPOST=0.9986;RSQ=0.9245;ERATE=0.0004;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16740561 . C CT 240 PASS INDEL;BAVGPOST=0.991;BRSQ=0.542;LDAF=0.0066;AVGPOST=0.9956;RSQ=0.7020;ERATE=0.0013;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16740570 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0029;AVGPOST=0.9969;RSQ=0.5772;ERATE=0.0006;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16740647 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.801;LDAF=0.0071;AVGPOST=0.9952;RSQ=0.7229;ERATE=0.0006;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 16740653 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.2759;AVGPOST=0.9945;RSQ=0.9884;ERATE=0.0006;THETA=0.0006;AC=603;AN=2184 GT:DS:GL:BD 0.27609891 0
1 16740670 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0030;AVGPOST=0.9985;RSQ=0.7700;ERATE=0.0008;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16740709 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0073;AVGPOST=0.9991;RSQ=0.9553;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16740767 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0359;AVGPOST=0.9950;RSQ=0.9490;ERATE=0.0005;THETA=0.0009;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 16741015 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16741059 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.760;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16741078 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0594;AVGPOST=0.9997;RSQ=0.9976;ERATE=0.0003;THETA=0.0020;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 16741089 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.807;LDAF=0.0048;AVGPOST=0.9986;RSQ=0.8728;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16741461 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.5488;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16741542 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9376;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16741572 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0029;AVGPOST=0.9979;RSQ=0.7132;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16741630 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.941;LDAF=0.0412;AVGPOST=0.9928;RSQ=0.9252;ERATE=0.0003;THETA=0.0010;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 16741705 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6183;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16741956 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0027;AVGPOST=0.9956;RSQ=0.3585;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16741972 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0057;AVGPOST=0.9992;RSQ=0.9353;ERATE=0.0003;THETA=0.0021;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 16742023 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16742045 . C CTAT 1528 PASS INDEL;BAVGPOST=0.995;BRSQ=0.895;LDAF=0.0223;AVGPOST=0.9910;RSQ=0.8321;ERATE=0.0011;THETA=0.0014;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 16742123 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.707;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7466;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16742162 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.439;LDAF=0.0086;AVGPOST=0.9889;RSQ=0.4748;ERATE=0.0006;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16742215 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.860;LDAF=0.0603;AVGPOST=0.9971;RSQ=0.9813;ERATE=0.0004;THETA=0.0028;AC=129;AN=2184 GT:DS:GL:BD 0.05906593 0
1 16742275 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.562;LDAF=0.0059;AVGPOST=0.9966;RSQ=0.7715;ERATE=0.0007;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16742304 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.495;LDAF=0.0023;AVGPOST=0.9971;RSQ=0.4553;ERATE=0.0006;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16742671 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0072;AVGPOST=0.9993;RSQ=0.9551;ERATE=0.0004;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16742703 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9766;ERATE=0.0004;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 16742722 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9389;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16742784 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16742820 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3295;AVGPOST=0.9952;RSQ=0.9917;ERATE=0.0007;THETA=0.0006;AC=718;AN=2184 GT:DS:GL:BD 0.32875457 0
1 16742976 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.845;LDAF=0.0085;AVGPOST=0.9957;RSQ=0.8101;ERATE=0.0004;THETA=0.0024;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 16743065 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0596;AVGPOST=0.9975;RSQ=0.9838;ERATE=0.0005;THETA=0.0008;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 16743078 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0083;AVGPOST=0.9980;RSQ=0.9031;ERATE=0.0003;THETA=0.0049;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 16743097 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.611;LDAF=0.0056;AVGPOST=0.9939;RSQ=0.6090;ERATE=0.0005;THETA=0.0013;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16743342 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3373;AVGPOST=0.9952;RSQ=0.9923;ERATE=0.0009;THETA=0.0006;AC=735;AN=2184 GT:DS:GL:BD 0.33653846 0
1 16743355 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0265;AVGPOST=0.9994;RSQ=0.9903;ERATE=0.0003;THETA=0.0002;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 16743378 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5109;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16743386 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9734;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16743398 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3334;AVGPOST=0.9961;RSQ=0.9940;ERATE=0.0005;THETA=0.0007;AC=726;AN=2184 GT:DS:GL:BD 0.33241758 0
1 16743601 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0019;AVGPOST=0.9978;RSQ=0.5069;ERATE=0.0006;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16743679 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6428;ERATE=0.0003;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16743761 . C CT 1135 PASS INDEL;BAVGPOST=0.979;BRSQ=0.731;LDAF=0.0462;AVGPOST=0.9664;RSQ=0.7171;ERATE=0.0038;THETA=0.0008;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 16743768 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.982;LDAF=0.2501;AVGPOST=0.9963;RSQ=0.9925;ERATE=0.0005;THETA=0.0005;AC=547;AN=2184 GT:DS:GL:BD 0.25045788 0
1 16743989 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0101;AVGPOST=0.9937;RSQ=0.7773;ERATE=0.0006;THETA=0.0027;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 16744041 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.7914;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16744110 . AG A 251 PASS INDEL;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0033;AVGPOST=0.9967;RSQ=0.5946;ERATE=0.0006;THETA=0.0040;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16744117 . G GT 2364 PASS INDEL;BAVGPOST=0.996;BRSQ=0.958;LDAF=0.0410;AVGPOST=0.9872;RSQ=0.8832;ERATE=0.0020;THETA=0.0006;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 16744307 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.943;LDAF=0.0301;AVGPOST=0.9977;RSQ=0.9737;ERATE=0.0004;THETA=0.0018;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 16744325 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.4157;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16744689 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9602;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16744763 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0081;AVGPOST=0.9985;RSQ=0.9298;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 16744789 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0082;AVGPOST=0.9978;RSQ=0.8897;ERATE=0.0006;THETA=0.0044;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 16744793 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0082;AVGPOST=0.9976;RSQ=0.8986;ERATE=0.0004;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 16744797 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.8722;ERATE=0.0004;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16744827 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.600;LDAF=0.0043;AVGPOST=0.9954;RSQ=0.6271;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16744915 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.932;LDAF=0.0695;AVGPOST=0.9861;RSQ=0.9120;ERATE=0.0005;THETA=0.0035;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 16744959 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0163;AVGPOST=0.9983;RSQ=0.9614;ERATE=0.0004;THETA=0.0012;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 16744982 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0025;AVGPOST=0.9992;RSQ=0.8548;ERATE=0.0005;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16745003 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.897;LDAF=0.0116;AVGPOST=0.9956;RSQ=0.8587;ERATE=0.0007;THETA=0.0010;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 16745090 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0083;AVGPOST=0.9982;RSQ=0.9185;ERATE=0.0004;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 16745156 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4445;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16745186 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8145;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16745211 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.942;LDAF=0.0090;AVGPOST=0.9985;RSQ=0.9328;ERATE=0.0005;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 16745260 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5194;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16745269 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4832;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16745271 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=0.9982;RSQ=0.8355;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16745304 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.2513;AVGPOST=0.9960;RSQ=0.9923;ERATE=0.0004;THETA=0.0003;AC=547;AN=2184 GT:DS:GL:BD 0.25045788 0
1 16745316 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0085;AVGPOST=0.9982;RSQ=0.9204;ERATE=0.0004;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 16745343 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0077;AVGPOST=0.9997;RSQ=0.9838;ERATE=0.0003;THETA=0.0008;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 16745406 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16745512 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0017;AVGPOST=0.9997;RSQ=0.9431;ERATE=0.0003;THETA=0.0031;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16745518 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16745552 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16745610 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7396;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16745667 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.940;LDAF=0.0254;AVGPOST=0.9973;RSQ=0.9537;ERATE=0.0004;THETA=0.0011;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 16745697 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6318;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16745755 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5775;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16745759 . A AG 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5409;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16745995 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9019;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16746115 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0020;AVGPOST=0.9990;RSQ=0.8201;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16746168 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0083;AVGPOST=0.9982;RSQ=0.9103;ERATE=0.0005;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 16746218 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0040;AVGPOST=0.9985;RSQ=0.8683;ERATE=0.0004;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16746392 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0027;AVGPOST=0.9988;RSQ=0.8032;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16746415 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0301;AVGPOST=0.9992;RSQ=0.9911;ERATE=0.0003;THETA=0.0004;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 16746587 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0375;AVGPOST=0.9998;RSQ=0.9974;ERATE=0.0003;THETA=0.0018;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 16746692 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0375;AVGPOST=0.9995;RSQ=0.9946;ERATE=0.0003;THETA=0.0004;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 16746779 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0071;AVGPOST=0.9985;RSQ=0.9130;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16746807 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8005;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16746855 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0012;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16746862 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.848;LDAF=0.0045;AVGPOST=0.9981;RSQ=0.8295;ERATE=0.0004;THETA=0.0028;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16746872 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7691;ERATE=0.0003;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16746888 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.2951;AVGPOST=0.9965;RSQ=0.9941;ERATE=0.0006;THETA=0.0004;AC=643;AN=2184 GT:DS:GL:BD 0.29441392 0
1 16746901 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.976;LDAF=0.0713;AVGPOST=0.9964;RSQ=0.9798;ERATE=0.0003;THETA=0.0008;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 16747023 . AAG A 135 PASS INDEL;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7211;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16747072 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.701;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16747085 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0002;AVGPOST=0.9997;RSQ=0.0640;ERATE=0.0003;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 16747097 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0307;AVGPOST=0.9988;RSQ=0.9874;ERATE=0.0003;THETA=0.0007;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 16747253 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9450;ERATE=0.0003;THETA=0.0016;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16747291 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.842;LDAF=0.0039;AVGPOST=0.9986;RSQ=0.8825;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16747320 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0544;AVGPOST=0.9997;RSQ=0.9976;ERATE=0.0003;THETA=0.0004;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 16747328 . A AG 8866 PASS INDEL;BAVGPOST=0.997;BRSQ=0.974;LDAF=0.0528;AVGPOST=0.9980;RSQ=0.9866;ERATE=0.0003;THETA=0.0014;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 16747348 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7766;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16747435 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8916;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16747489 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0547;AVGPOST=0.9993;RSQ=0.9951;ERATE=0.0003;THETA=0.0003;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 16747503 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9997;RSQ=0.9823;ERATE=0.0003;THETA=0.0008;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 16747508 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16747615 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2148;AVGPOST=0.9973;RSQ=0.9939;ERATE=0.0006;THETA=0.0010;AC=468;AN=2184 GT:DS:GL:BD 0.21428572 0
1 16747639 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6265;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16747672 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.5971;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16747674 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9341;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16747686 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0095;AVGPOST=0.9993;RSQ=0.9631;ERATE=0.0004;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 16747700 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.972;LDAF=0.1694;AVGPOST=0.9816;RSQ=0.9540;ERATE=0.0043;THETA=0.0006;AC=361;AN=2184 GT:DS:GL:BD 0.16529304 0
1 16747764 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0544;AVGPOST=0.9999;RSQ=0.9989;ERATE=0.0003;THETA=0.0037;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 16747911 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0069;AVGPOST=0.9998;RSQ=0.9873;ERATE=0.0003;THETA=0.0051;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16747987 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16748087 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0068;AVGPOST=0.9998;RSQ=0.9874;ERATE=0.0003;THETA=0.0010;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16748238 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0052;AVGPOST=0.9996;RSQ=0.9787;ERATE=0.0003;THETA=0.0066;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16748308 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0512;AVGPOST=1.0000;RSQ=0.9996;ERATE=0.0015;THETA=0.0010;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 16748362 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0525;AVGPOST=1.0000;RSQ=0.9996;ERATE=0.0003;THETA=0.0009;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 16748368 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16748432 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0343;AVGPOST=1.0000;RSQ=0.9994;ERATE=0.0003;THETA=0.0005;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 16748433 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0059;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16748476 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0484;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 16748479 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0202;AVGPOST=0.9999;RSQ=0.9979;ERATE=0.0003;THETA=0.0009;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 16748485 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0078;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 16748487 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9936;ERATE=0.0003;THETA=0.0009;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16748491 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0010;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16748595 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7459;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16748601 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16748656 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.755;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16748667 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0516;AVGPOST=0.9997;RSQ=0.9978;ERATE=0.0003;THETA=0.0005;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 16748712 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16748728 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0015;AVGPOST=0.9985;RSQ=0.6505;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16748778 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16748829 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0052;AVGPOST=0.9997;RSQ=0.9717;ERATE=0.0003;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16748879 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0097;AVGPOST=0.9998;RSQ=0.9896;ERATE=0.0003;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 16748900 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0516;AVGPOST=0.9996;RSQ=0.9970;ERATE=0.0003;THETA=0.0004;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 16748901 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.727;LDAF=0.0020;AVGPOST=0.9986;RSQ=0.7213;ERATE=0.0004;THETA=0.0031;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16748967 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0010;AVGPOST=0.9987;RSQ=0.4289;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16749109 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0040;AVGPOST=0.9972;RSQ=0.7410;ERATE=0.0005;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16749124 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.809;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16749215 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5337;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16749433 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.8063;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16749630 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.955;LDAF=0.0175;AVGPOST=0.9957;RSQ=0.9103;ERATE=0.0007;THETA=0.0013;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 16749651 MERGED_DEL_2_1930 C <DEL> . . SV;BAVGPOST=0.997;BRSQ=0.823;LDAF=0.0074;AVGPOST=0.9979;RSQ=0.8793;ERATE=0.0004;THETA=0.0007;CIEND=-178,192;CIPOS=-156,215;END=16756650;SOURCE=CNVnator_16749651_16756650;SVTYPE=DEL;AC=15;AN= GT:DS:GL:BD 0.00686813 0
1 16749781 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.625;LDAF=0.0050;AVGPOST=0.9957;RSQ=0.6423;ERATE=0.0005;THETA=0.0013;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16749794 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0031;AVGPOST=0.9947;RSQ=0.3659;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16749836 . AG A 61 PASS INDEL;BAVGPOST=0.996;BRSQ=0.685;LDAF=0.0142;AVGPOST=0.9833;RSQ=0.5134;ERATE=0.0038;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 16749848 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.794;LDAF=0.0131;AVGPOST=0.9935;RSQ=0.8306;ERATE=0.0004;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 16749863 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.799;LDAF=0.0074;AVGPOST=0.9984;RSQ=0.8967;ERATE=0.0004;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16750092 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.715;LDAF=0.0040;AVGPOST=0.9952;RSQ=0.5148;ERATE=0.0007;THETA=0.0030;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16750124 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.842;LDAF=0.0108;AVGPOST=0.9943;RSQ=0.7855;ERATE=0.0008;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 16750193 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0048;AVGPOST=0.9959;RSQ=0.6448;ERATE=0.0008;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16750219 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.599;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5198;ERATE=0.0005;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16750424 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6037;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16750601 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0130;AVGPOST=0.9992;RSQ=0.9728;ERATE=0.0003;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 16750670 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.924;LDAF=0.0099;AVGPOST=0.9955;RSQ=0.8244;ERATE=0.0007;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 16750794 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.934;LDAF=0.0174;AVGPOST=0.9963;RSQ=0.9154;ERATE=0.0005;THETA=0.0008;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 16750910 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0069;AVGPOST=0.9980;RSQ=0.8767;ERATE=0.0004;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 16750945 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.710;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.5485;ERATE=0.0005;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16751101 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.678;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6796;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16751156 MERGED_DEL_2_1931 ACCTCAGCCTCCCAAAGTGCTGGGATTACAAGCACGAGCCACGGCGCCTGGCCTCTAATCATATCTTGCAAAATCTTACAAAGGCTCAGCAGCTAGTAAACTGCTTCCAGGATATCCTAGCATACAGAAACCTGTTTCAGCTTTGTTAAACTCAGCATGTCCCAATATTATCTGTATACAGAACCTGGCA A . . SV;BAVGPOST=0.997;BRSQ=0.863;LDAF=0.0077;AVGPOST=0.9981;RSQ=0.8876;ERATE=0.0005;THETA=0.0026;CIEND=-60,93;CIPOS=-73,84;END=16755118;HOMLEN=29;HOMSEQ=CCTCAGCCTCCCAAAGTGCTGGGATTACA;SOURCE=Brea GT:DS:GL:BD 0.00686813 0
1 16751197 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5571;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16751200 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0030;AVGPOST=0.9976;RSQ=0.6753;ERATE=0.0011;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16751201 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.605;LDAF=0.0043;AVGPOST=0.9956;RSQ=0.6513;ERATE=0.0003;THETA=0.0011;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16751245 rs113872394 C CA 403 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0039;AVGPOST=0.9994;RSQ=0.9272;ERATE=0.0004;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16751293 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4959;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16751311 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16751435 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0020;AVGPOST=0.9978;RSQ=0.5726;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16751476 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.743;LDAF=0.0031;AVGPOST=0.9983;RSQ=0.7847;ERATE=0.0003;THETA=0.0025;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16751657 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4733;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16751694 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0047;AVGPOST=0.9988;RSQ=0.8931;ERATE=0.0004;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16751837 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5492;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16751926 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0041;AVGPOST=0.9995;RSQ=0.9502;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16751989 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6536;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16752057 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.877;LDAF=0.0220;AVGPOST=0.9970;RSQ=0.9415;ERATE=0.0004;THETA=0.0006;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 16752189 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.770;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5938;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16752279 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16752320 . TA T 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.734;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.4495;ERATE=0.0006;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16752372 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0004;AVGPOST=0.9993;RSQ=0.3606;ERATE=0.0003;THETA=0.0009;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 16752420 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.3839;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16752524 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.992;LDAF=0.3741;AVGPOST=0.9903;RSQ=0.9849;ERATE=0.0005;THETA=0.0011;AC=819;AN=2184 GT:DS:GL:BD 0.37500000 0
1 16752590 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.0083;AVGPOST=0.9966;RSQ=0.8366;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 16752591 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0080;AVGPOST=0.9984;RSQ=0.9187;ERATE=0.0004;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 16752643 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.963;LDAF=0.0186;AVGPOST=0.9971;RSQ=0.9419;ERATE=0.0004;THETA=0.0005;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 16752691 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6554;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16752748 . ACT A 123 PASS INDEL;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0024;AVGPOST=0.9974;RSQ=0.6549;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16752815 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.649;LDAF=0.0021;AVGPOST=0.9981;RSQ=0.6050;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16752857 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.912;LDAF=0.0198;AVGPOST=0.9957;RSQ=0.9244;ERATE=0.0005;THETA=0.0007;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 16753076 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.672;BRSQ=0.291;LDAF=0.3852;AVGPOST=0.6733;RSQ=0.3468;ERATE=0.0931;THETA=0.0008;AC=650;AN=2184 GT:DS:GL:BD 0.29761904 0
1 16753149 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.929;LDAF=0.0841;AVGPOST=0.9750;RSQ=0.8785;ERATE=0.0013;THETA=0.0006;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 16753314 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0024;AVGPOST=0.9971;RSQ=0.5281;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16753371 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0200;AVGPOST=0.9991;RSQ=0.9829;ERATE=0.0003;THETA=0.0006;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 16753429 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16753493 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6505;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16753827 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7195;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16753982 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.816;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16753988 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0191;AVGPOST=0.9992;RSQ=0.9854;ERATE=0.0003;THETA=0.0008;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 16754015 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9424;ERATE=0.0003;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16754079 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8015;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16754152 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0344;AVGPOST=0.9996;RSQ=0.9948;ERATE=0.0003;THETA=0.0004;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 16754169 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0028;AVGPOST=0.9984;RSQ=0.7960;ERATE=0.0009;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16754248 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6237;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16754282 . TTC T 45 PASS INDEL;BAVGPOST=0.989;BRSQ=0.575;LDAF=0.0266;AVGPOST=0.9666;RSQ=0.4849;ERATE=0.0091;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 16754313 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.851;LDAF=0.0094;AVGPOST=0.9964;RSQ=0.8398;ERATE=0.0004;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 16754329 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0045;AVGPOST=0.9992;RSQ=0.9183;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16754376 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.725;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7129;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16754410 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.760;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7002;ERATE=0.0005;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16754691 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.982;LDAF=0.0568;AVGPOST=0.9968;RSQ=0.9768;ERATE=0.0005;THETA=0.0005;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 16754709 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0022;AVGPOST=0.9986;RSQ=0.7562;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16754835 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0344;AVGPOST=0.9997;RSQ=0.9964;ERATE=0.0003;THETA=0.0006;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 16755010 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0022;AVGPOST=0.9966;RSQ=0.3503;ERATE=0.0009;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16755057 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0040;AVGPOST=0.9983;RSQ=0.8367;ERATE=0.0007;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16755063 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.966;LDAF=0.3695;AVGPOST=0.9828;RSQ=0.9745;ERATE=0.0010;THETA=0.0007;AC=813;AN=2184 GT:DS:GL:BD 0.37225273 0
1 16755185 . ATCAC A 1780 PASS INDEL;BAVGPOST=0.998;BRSQ=0.899;LDAF=0.0116;AVGPOST=0.9935;RSQ=0.8091;ERATE=0.0004;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 16755300 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16755468 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0057;AVGPOST=0.9986;RSQ=0.9042;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16755487 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0039;AVGPOST=0.9996;RSQ=0.9508;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16755490 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0038;AVGPOST=0.9974;RSQ=0.7883;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16755657 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.816;LDAF=0.0048;AVGPOST=0.9936;RSQ=0.4945;ERATE=0.0012;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16755693 . TCG T 397 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0081;AVGPOST=0.9994;RSQ=0.9644;ERATE=0.0004;THETA=0.0036;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 16755800 . G GT 1413 PASS INDEL;BAVGPOST=0.966;BRSQ=0.690;LDAF=0.0782;AVGPOST=0.9254;RSQ=0.5775;ERATE=0.0163;THETA=0.0003;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 16755815 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.967;LDAF=0.0253;AVGPOST=0.9963;RSQ=0.9404;ERATE=0.0004;THETA=0.0005;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 16755835 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0132;AVGPOST=0.9983;RSQ=0.9465;ERATE=0.0004;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 16755873 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.988;LDAF=0.6746;AVGPOST=0.9881;RSQ=0.9807;ERATE=0.0004;THETA=0.0003;AC=1476;AN=2184 GT:DS:GL:BD 0.67582417 1
1 16755936 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0050;AVGPOST=0.9988;RSQ=0.9018;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16755953 . A ATTTG 2785 PASS INDEL;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0216;AVGPOST=0.9983;RSQ=0.9702;ERATE=0.0005;THETA=0.0003;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 16755957 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0221;AVGPOST=0.9996;RSQ=0.9924;ERATE=0.0004;THETA=0.0004;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 16755977 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.685;LDAF=0.0085;AVGPOST=0.9935;RSQ=0.7047;ERATE=0.0023;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 16756026 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.963;BRSQ=0.939;LDAF=0.3315;AVGPOST=0.9736;RSQ=0.9635;ERATE=0.0014;THETA=0.0008;AC=732;AN=2184 GT:DS:GL:BD 0.33516484 0
1 16756072 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.952;LDAF=0.0146;AVGPOST=0.9975;RSQ=0.9434;ERATE=0.0005;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 16756148 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.609;LDAF=0.0131;AVGPOST=0.9895;RSQ=0.6867;ERATE=0.0006;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 16756199 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.840;LDAF=0.0057;AVGPOST=0.9947;RSQ=0.5821;ERATE=0.0008;THETA=0.0043;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16756221 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.725;LDAF=0.0473;AVGPOST=0.9786;RSQ=0.8205;ERATE=0.0010;THETA=0.0003;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 16756365 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8845;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16756386 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.680;LDAF=0.0024;AVGPOST=0.9974;RSQ=0.5871;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16756816 . T TG 4243 PASS INDEL;BAVGPOST=0.998;BRSQ=0.963;LDAF=0.0330;AVGPOST=0.9973;RSQ=0.9745;ERATE=0.0003;THETA=0.0003;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 16756818 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.959;LDAF=0.0330;AVGPOST=0.9971;RSQ=0.9715;ERATE=0.0004;THETA=0.0006;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 16756819 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.959;LDAF=0.0331;AVGPOST=0.9971;RSQ=0.9711;ERATE=0.0004;THETA=0.0002;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 16756877 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4881;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16756886 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0053;AVGPOST=0.9975;RSQ=0.8115;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16756906 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0026;AVGPOST=0.9978;RSQ=0.6746;ERATE=0.0012;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16756915 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7949;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16756973 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0452;AVGPOST=0.9988;RSQ=0.9903;ERATE=0.0003;THETA=0.0014;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 16757014 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0220;AVGPOST=0.9999;RSQ=0.9971;ERATE=0.0003;THETA=0.0022;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 16757112 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0053;AVGPOST=0.9992;RSQ=0.9281;ERATE=0.0004;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16757120 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0220;AVGPOST=0.9999;RSQ=0.9972;ERATE=0.0003;THETA=0.0006;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 16757252 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16757278 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0057;AVGPOST=0.9987;RSQ=0.9148;ERATE=0.0003;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16757361 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8625;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16757410 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16757426 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16757490 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0219;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0039;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 16757735 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16757893 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16757903 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16757944 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16758026 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16758052 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0003;THETA=0.0039;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16758078 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0146;AVGPOST=0.9998;RSQ=0.9925;ERATE=0.0003;THETA=0.0006;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 16758080 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0149;AVGPOST=0.9995;RSQ=0.9906;ERATE=0.0003;THETA=0.0029;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 16758125 . G GA 86 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9982;RSQ=0.6510;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16758168 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6995;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16758227 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9438;ERATE=0.0004;THETA=0.0043;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16758326 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16758415 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0034;AVGPOST=0.9993;RSQ=0.9221;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16758445 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5782;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16758525 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16758526 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.669;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6236;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16758542 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0144;AVGPOST=0.9975;RSQ=0.9410;ERATE=0.0003;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 16758573 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0221;AVGPOST=0.9979;RSQ=0.9629;ERATE=0.0003;THETA=0.0006;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 16758591 . TTTC T 916 PASS INDEL;BAVGPOST=0.998;BRSQ=0.960;LDAF=0.0192;AVGPOST=0.9937;RSQ=0.8692;ERATE=0.0008;THETA=0.0004;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 16758611 . T TC 22 PASS INDEL;BAVGPOST=0.980;BRSQ=0.431;LDAF=0.0225;AVGPOST=0.9695;RSQ=0.4813;ERATE=0.0014;THETA=0.0006;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 16758868 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.625;LDAF=0.0024;AVGPOST=0.9975;RSQ=0.5810;ERATE=0.0005;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16759083 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.2730;AVGPOST=0.9923;RSQ=0.9878;ERATE=0.0006;THETA=0.0003;AC=594;AN=2184 GT:DS:GL:BD 0.27197802 0
1 16759249 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9734;ERATE=0.0003;THETA=0.0027;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16759325 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0346;AVGPOST=0.9992;RSQ=0.9898;ERATE=0.0004;THETA=0.0004;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 16759332 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0042;AVGPOST=0.9968;RSQ=0.7352;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16759569 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0023;AVGPOST=0.9998;RSQ=0.9618;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16759590 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9197;ERATE=0.0003;THETA=0.0051;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16759595 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8995;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16759616 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.3063;AVGPOST=0.9950;RSQ=0.9919;ERATE=0.0004;THETA=0.0006;AC=669;AN=2184 GT:DS:GL:BD 0.30631867 0
1 16759623 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7335;ERATE=0.0006;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16759704 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8287;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16759853 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0054;AVGPOST=0.9973;RSQ=0.8175;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16759975 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5892;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16760037 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2681;AVGPOST=0.9924;RSQ=0.9850;ERATE=0.0013;THETA=0.0052;AC=584;AN=2184 GT:DS:GL:BD 0.26739928 0
1 16760050 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16760142 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0032;AVGPOST=0.9971;RSQ=0.6693;ERATE=0.0004;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16760407 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16760429 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16760624 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9064;ERATE=0.0003;THETA=0.0023;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16760696 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6237;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16760844 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.950;LDAF=0.0075;AVGPOST=0.9975;RSQ=0.8738;ERATE=0.0005;THETA=0.0014;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 16760848 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0030;AVGPOST=0.9984;RSQ=0.7980;ERATE=0.0003;THETA=0.0016;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16760950 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0106;AVGPOST=0.9975;RSQ=0.9056;ERATE=0.0005;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 16761195 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.1484;AVGPOST=0.9950;RSQ=0.9860;ERATE=0.0005;THETA=0.0005;AC=321;AN=2184 GT:DS:GL:BD 0.14697802 0
1 16761203 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4697;ERATE=0.0003;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16761256 . CA C 3010 PASS INDEL;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0341;AVGPOST=0.9985;RSQ=0.9818;ERATE=0.0004;THETA=0.0053;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 16761339 . ATC A 630 PASS INDEL;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0034;AVGPOST=0.9989;RSQ=0.8583;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16761341 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.983;LDAF=0.1157;AVGPOST=0.9941;RSQ=0.9814;ERATE=0.0007;THETA=0.0075;AC=253;AN=2184 GT:DS:GL:BD 0.11584249 0
1 16761363 . TA T 186 PASS INDEL;BAVGPOST=0.984;BRSQ=0.667;LDAF=0.0195;AVGPOST=0.9867;RSQ=0.7542;ERATE=0.0005;THETA=0.0006;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 16761394 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8039;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16761429 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.930;LDAF=0.0377;AVGPOST=0.9945;RSQ=0.9380;ERATE=0.0003;THETA=0.0016;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 16761646 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0082;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16761658 . C CT 59 PASS INDEL;BAVGPOST=1.000;BRSQ=0.694;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7702;ERATE=0.0004;THETA=0.0023;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16761690 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9471;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16761711 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0200;AVGPOST=0.9992;RSQ=0.9831;ERATE=0.0004;THETA=0.0023;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 16761843 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.676;LDAF=0.0010;AVGPOST=0.9987;RSQ=0.4288;ERATE=0.0003;THETA=0.0115;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16761912 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.972;LDAF=0.1402;AVGPOST=0.9878;RSQ=0.9632;ERATE=0.0018;THETA=0.0035;AC=302;AN=2184 GT:DS:GL:BD 0.13827839 0
1 16761960 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.896;LDAF=0.0077;AVGPOST=0.9978;RSQ=0.8739;ERATE=0.0005;THETA=0.0015;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16761962 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.930;LDAF=0.1824;AVGPOST=0.9649;RSQ=0.9162;ERATE=0.0088;THETA=0.0041;AC=383;AN=2184 GT:DS:GL:BD 0.17536630 0
1 16762000 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.610;LDAF=0.0037;AVGPOST=0.9981;RSQ=0.7991;ERATE=0.0004;THETA=0.0040;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16762164 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0237;AVGPOST=0.9970;RSQ=0.9522;ERATE=0.0003;THETA=0.0155;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 16762247 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8332;ERATE=0.0003;THETA=0.0040;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16762318 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6116;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16762403 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0366;AVGPOST=0.9995;RSQ=0.9941;ERATE=0.0004;THETA=0.0018;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 16762448 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0061;AVGPOST=0.9998;RSQ=0.9822;ERATE=0.0003;THETA=0.0049;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 16762541 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0047;AVGPOST=0.9975;RSQ=0.7829;ERATE=0.0005;THETA=0.0028;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16762711 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.578;LDAF=0.0031;AVGPOST=0.9963;RSQ=0.5142;ERATE=0.0005;THETA=0.0017;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16762837 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0037;AVGPOST=0.9960;RSQ=0.6373;ERATE=0.0005;THETA=0.0030;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16762929 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0283;AVGPOST=0.9971;RSQ=0.9629;ERATE=0.0005;THETA=0.0005;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 16762930 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0276;AVGPOST=0.9973;RSQ=0.9653;ERATE=0.0003;THETA=0.0006;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 16762960 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0215;AVGPOST=0.9999;RSQ=0.9980;ERATE=0.0003;THETA=0.0019;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 16763224 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.924;LDAF=0.0211;AVGPOST=0.9983;RSQ=0.9654;ERATE=0.0006;THETA=0.0005;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 16763288 . A AC 1697 PASS INDEL;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0188;AVGPOST=0.9980;RSQ=0.9566;ERATE=0.0005;THETA=0.0017;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 16763352 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16763364 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0232;AVGPOST=0.9986;RSQ=0.9739;ERATE=0.0003;THETA=0.0011;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 16763381 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.633;LDAF=0.0037;AVGPOST=0.9991;RSQ=0.8971;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16763529 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0042;AVGPOST=0.9997;RSQ=0.9658;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16763548 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.751;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5149;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16763557 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0017;AVGPOST=0.9979;RSQ=0.5293;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16763639 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0365;AVGPOST=0.9997;RSQ=0.9967;ERATE=0.0003;THETA=0.0007;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 16763841 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7673;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16763879 rs111697755 AC A 27858 PASS INDEL;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.1920;AVGPOST=0.9932;RSQ=0.9846;ERATE=0.0006;THETA=0.0015;AC=418;AN=2184 GT:DS:GL:BD 0.19139194 0
1 16763909 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0135;AVGPOST=0.9994;RSQ=0.9795;ERATE=0.0003;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 16763913 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6808;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16763983 . CA C 62 PASS INDEL;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0017;AVGPOST=0.9988;RSQ=0.6702;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16764021 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8156;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16764139 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0032;AVGPOST=0.9995;RSQ=0.9368;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16764282 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0039;AVGPOST=0.9991;RSQ=0.9124;ERATE=0.0003;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16764337 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0216;AVGPOST=0.9996;RSQ=0.9909;ERATE=0.0003;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 16764363 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6084;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16764377 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.3765;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16764472 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.508;LDAF=0.0162;AVGPOST=0.9810;RSQ=0.5468;ERATE=0.0046;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 16764501 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0367;AVGPOST=0.9997;RSQ=0.9961;ERATE=0.0003;THETA=0.0010;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 16764703 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.5734;AVGPOST=0.9888;RSQ=0.9817;ERATE=0.0010;THETA=0.0004;AC=1257;AN=2184 GT:DS:GL:BD 0.57554942 1
1 16764806 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.675;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5709;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16764807 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0186;AVGPOST=0.9989;RSQ=0.9756;ERATE=0.0003;THETA=0.0005;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 16764889 . AAAAAG A 1292 PASS INDEL;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0139;AVGPOST=0.9985;RSQ=0.9514;ERATE=0.0005;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 16764961 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6924;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16765109 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5518;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16765164 . CAAACAAAACA C 2591 PASS INDEL;BAVGPOST=0.993;BRSQ=0.799;LDAF=0.0228;AVGPOST=0.9947;RSQ=0.9087;ERATE=0.0004;THETA=0.0003;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 16765184 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0407;AVGPOST=0.9993;RSQ=0.9925;ERATE=0.0004;THETA=0.0007;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 16765235 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.937;LDAF=0.0149;AVGPOST=0.9978;RSQ=0.9447;ERATE=0.0003;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 16765248 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7232;ERATE=0.0003;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16765291 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.819;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.8077;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16765346 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6622;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16765490 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0113;AVGPOST=0.9994;RSQ=0.9831;ERATE=0.0003;THETA=0.0007;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 16765566 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.3529;AVGPOST=0.9948;RSQ=0.9909;ERATE=0.0006;THETA=0.0003;AC=773;AN=2184 GT:DS:GL:BD 0.35393772 0
1 16765692 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0372;AVGPOST=0.9995;RSQ=0.9940;ERATE=0.0003;THETA=0.0005;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 16765792 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.834;LDAF=0.0085;AVGPOST=0.9977;RSQ=0.8791;ERATE=0.0005;THETA=0.0008;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 16765815 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0039;AVGPOST=0.9979;RSQ=0.8115;ERATE=0.0004;THETA=0.0011;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16765844 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.844;LDAF=0.0137;AVGPOST=0.9919;RSQ=0.7749;ERATE=0.0005;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 16765851 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.832;LDAF=0.0175;AVGPOST=0.9874;RSQ=0.7239;ERATE=0.0008;THETA=0.0011;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 16766006 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.651;LDAF=0.0074;AVGPOST=0.9925;RSQ=0.5921;ERATE=0.0008;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 16766040 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7573;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16766111 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6098;ERATE=0.0006;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16766111 . GGAGA G 110 PASS INDEL;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.4908;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16766344 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0094;AVGPOST=0.9966;RSQ=0.8561;ERATE=0.0005;THETA=0.0017;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 16766488 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0078;AVGPOST=0.9973;RSQ=0.8619;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16766769 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0183;AVGPOST=0.9998;RSQ=0.9955;ERATE=0.0003;THETA=0.0005;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 16766868 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0467;AVGPOST=0.9987;RSQ=0.9881;ERATE=0.0004;THETA=0.0003;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 16766970 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6046;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16766995 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6031;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16767030 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0207;AVGPOST=0.9996;RSQ=0.9908;ERATE=0.0003;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 16767069 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0276;AVGPOST=0.9985;RSQ=0.9787;ERATE=0.0003;THETA=0.0007;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 16767134 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6288;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16767208 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9181;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16767245 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16767269 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16767276 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16767283 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7811;ERATE=0.0003;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16767286 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0215;AVGPOST=0.9998;RSQ=0.9959;ERATE=0.0003;THETA=0.0005;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 16767301 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16767355 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16767359 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0366;AVGPOST=0.9998;RSQ=0.9978;ERATE=0.0003;THETA=0.0038;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 16767388 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16767506 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.909;LDAF=0.9959;AVGPOST=0.9978;RSQ=0.8103;ERATE=0.0003;THETA=0.0005;AC=2175;AN=2184 GT:DS:GL:BD 0.99587911 1
1 16767632 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8574;ERATE=0.0003;THETA=0.0045;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16767674 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0059;AVGPOST=0.9990;RSQ=0.9262;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 16767730 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7060;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16767735 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0037;AVGPOST=0.9964;RSQ=0.7065;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16767773 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.6368;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16767961 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0213;AVGPOST=0.9987;RSQ=0.9736;ERATE=0.0004;THETA=0.0004;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 16767965 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0013;AVGPOST=0.9994;RSQ=0.8064;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16767969 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8386;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16768000 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0124;AVGPOST=0.9998;RSQ=0.9928;ERATE=0.0003;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 16768001 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7337;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16768138 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16768178 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8067;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16768307 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0031;AVGPOST=0.9998;RSQ=0.9695;ERATE=0.0003;THETA=0.0015;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16768378 . AAAC A 255 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16768581 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0419;AVGPOST=0.9974;RSQ=0.9735;ERATE=0.0004;THETA=0.0005;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 16768583 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.601;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.4023;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16768665 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0110;AVGPOST=0.9995;RSQ=0.9842;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 16768778 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.732;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.5506;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16768781 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0084;AVGPOST=0.9976;RSQ=0.8862;ERATE=0.0004;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 16768880 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.849;LDAF=0.0052;AVGPOST=0.9971;RSQ=0.7796;ERATE=0.0011;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16768913 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9473;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16768923 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5510;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16768952 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.6288;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16768998 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16768999 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0034;AVGPOST=0.9986;RSQ=0.8347;ERATE=0.0006;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16769091 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.835;LDAF=0.0042;AVGPOST=0.9980;RSQ=0.8074;ERATE=0.0004;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16769105 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5277;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16769148 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16769397 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7995;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16769538 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8981;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16769568 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6108;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16769641 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16769690 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9994;RSQ=0.9147;ERATE=0.0004;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16769716 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7819;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16769725 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6913;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16769841 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0217;AVGPOST=0.9996;RSQ=0.9913;ERATE=0.0003;THETA=0.0006;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 16769876 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16769907 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7604;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16769949 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0923;AVGPOST=0.9998;RSQ=0.9987;ERATE=0.0003;THETA=0.0003;AC=202;AN=2184 GT:DS:GL:BD 0.09249084 0
1 16770054 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16770090 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 16770132 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16770154 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16770263 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16770296 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16770319 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16770349 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.8015;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16770380 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16770391 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16770492 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9299;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16770577 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6435;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16770647 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0223;AVGPOST=0.9985;RSQ=0.9756;ERATE=0.0004;THETA=0.0005;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 16770708 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0021;AVGPOST=0.9989;RSQ=0.8286;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16770759 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5918;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16770784 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0187;AVGPOST=0.9991;RSQ=0.9811;ERATE=0.0004;THETA=0.0009;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 16770835 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0360;AVGPOST=0.9995;RSQ=0.9944;ERATE=0.0003;THETA=0.0008;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 16770838 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7604;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16770871 . AT A 2022 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0167;AVGPOST=0.9994;RSQ=0.9876;ERATE=0.0003;THETA=0.0007;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 16771032 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.867;LDAF=0.0026;AVGPOST=0.9985;RSQ=0.7336;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16771103 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7141;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16771122 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0008;AVGPOST=0.9989;RSQ=0.4377;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16771134 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8893;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16771159 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0030;AVGPOST=0.9988;RSQ=0.8268;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16771177 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4232;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16771307 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.6983;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16771441 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.727;LDAF=0.0050;AVGPOST=0.9955;RSQ=0.6708;ERATE=0.0007;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16771474 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.988;LDAF=0.3651;AVGPOST=0.9946;RSQ=0.9897;ERATE=0.0005;THETA=0.0003;AC=800;AN=2184 GT:DS:GL:BD 0.36630037 0
1 16771499 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.453;LDAF=0.0037;AVGPOST=0.9963;RSQ=0.5738;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16771558 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0367;AVGPOST=0.9981;RSQ=0.9781;ERATE=0.0006;THETA=0.0004;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 16771582 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.704;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4138;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16771646 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1495;AVGPOST=0.9965;RSQ=0.9893;ERATE=0.0007;THETA=0.0004;AC=329;AN=2184 GT:DS:GL:BD 0.15064102 0
1 16771667 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16771675 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7398;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16771768 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16771797 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7618;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16771851 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0049;AVGPOST=0.9981;RSQ=0.8613;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16772178 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.777;LDAF=0.0040;AVGPOST=0.9973;RSQ=0.7411;ERATE=0.0005;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16772259 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0225;AVGPOST=0.9979;RSQ=0.9609;ERATE=0.0004;THETA=0.0006;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 16772504 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.961;LDAF=0.0373;AVGPOST=0.9981;RSQ=0.9806;ERATE=0.0006;THETA=0.0004;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 16772641 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.997;LDAF=0.5698;AVGPOST=0.9959;RSQ=0.9928;ERATE=0.0009;THETA=0.0004;AC=1247;AN=2184 GT:DS:GL:BD 0.57097071 1
1 16772799 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0367;AVGPOST=0.9982;RSQ=0.9822;ERATE=0.0003;THETA=0.0004;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 16772812 . AG A 274 PASS INDEL;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7410;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16772986 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5675;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16773004 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8712;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16773052 . GTTTC G 1790 PASS INDEL;BAVGPOST=0.998;BRSQ=0.982;LDAF=0.0104;AVGPOST=0.9991;RSQ=0.9679;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 16773059 . TC T 908 PASS INDEL;BAVGPOST=0.997;BRSQ=0.891;LDAF=0.0179;AVGPOST=0.9899;RSQ=0.7934;ERATE=0.0015;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 16773074 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.910;LDAF=0.0129;AVGPOST=0.9939;RSQ=0.8298;ERATE=0.0004;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 16773176 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.965;LDAF=0.0052;AVGPOST=0.9995;RSQ=0.9504;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16773387 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.982;LDAF=0.4235;AVGPOST=0.9834;RSQ=0.9743;ERATE=0.0022;THETA=0.0004;AC=924;AN=2184 GT:DS:GL:BD 0.42307693 0
1 16773416 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.911;LDAF=0.0082;AVGPOST=0.9965;RSQ=0.8331;ERATE=0.0005;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 16773514 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0064;AVGPOST=0.9963;RSQ=0.7856;ERATE=0.0005;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 16773651 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0104;AVGPOST=0.9990;RSQ=0.9614;ERATE=0.0003;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 16773732 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0027;AVGPOST=0.9980;RSQ=0.7452;ERATE=0.0004;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16773762 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.894;LDAF=0.0035;AVGPOST=0.9989;RSQ=0.8616;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16773771 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0358;AVGPOST=0.9988;RSQ=0.9874;ERATE=0.0003;THETA=0.0003;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 16773880 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.6346;AVGPOST=0.9975;RSQ=0.9956;ERATE=0.0005;THETA=0.0003;AC=1385;AN=2184 GT:DS:GL:BD 0.63415754 1
1 16773905 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0190;AVGPOST=0.9995;RSQ=0.9872;ERATE=0.0003;THETA=0.0005;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 16774124 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16774177 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16774280 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9882;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16774319 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16774320 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16774419 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16774425 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16774505 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16774544 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16774561 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16774586 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16774589 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0007;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 16774660 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9822;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16774684 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0100;AVGPOST=0.9998;RSQ=0.9942;ERATE=0.0003;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 16774772 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0500;ERATE=0.0003;THETA=0.0008;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 16774782 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16775049 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0023;AVGPOST=0.9981;RSQ=0.6690;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16775091 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.701;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6200;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16775120 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=0.9999;RSQ=0.0499;ERATE=0.0003;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 16775153 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16775172 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.764;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6976;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16775192 . T TC 8 PASS INDEL;BAVGPOST=0.999;BRSQ=0.705;LDAF=0.0028;AVGPOST=0.9961;RSQ=0.3974;ERATE=0.0008;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16775315 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0042;AVGPOST=0.9989;RSQ=0.8818;ERATE=0.0006;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16775459 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16775532 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0031;AVGPOST=0.9997;RSQ=0.9556;ERATE=0.0013;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16775582 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0146;AVGPOST=0.9997;RSQ=0.9923;ERATE=0.0003;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 16775632 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9286;ERATE=0.0007;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16775642 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16775788 . AGTT A 309 PASS INDEL;BAVGPOST=1.000;BRSQ=0.762;LDAF=0.0003;AVGPOST=0.9993;RSQ=0.1161;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 16775809 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0382;AVGPOST=0.9995;RSQ=0.9954;ERATE=0.0003;THETA=0.0005;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 16775836 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16776017 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.889;LDAF=0.0031;AVGPOST=0.9985;RSQ=0.8167;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16776121 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16776285 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.7085;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16776366 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0028;AVGPOST=0.9988;RSQ=0.8350;ERATE=0.0005;THETA=0.0013;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16776460 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8540;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16776590 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6589;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16776648 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5892;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16776767 . T TG 840 PASS INDEL;BAVGPOST=0.994;BRSQ=0.842;LDAF=0.0300;AVGPOST=0.9860;RSQ=0.8282;ERATE=0.0009;THETA=0.0002;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 16776804 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4285;AVGPOST=0.9963;RSQ=0.9937;ERATE=0.0007;THETA=0.0002;AC=935;AN=2184 GT:DS:GL:BD 0.42811355 0
1 16776868 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4281;AVGPOST=0.9982;RSQ=0.9968;ERATE=0.0005;THETA=0.0024;AC=935;AN=2184 GT:DS:GL:BD 0.42811355 0
1 16776929 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0268;AVGPOST=0.9981;RSQ=0.9726;ERATE=0.0004;THETA=0.0004;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 16777062 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6611;ERATE=0.0009;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16777108 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16777180 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=0.9984;RSQ=0.8208;ERATE=0.0005;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16777232 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0049;AVGPOST=0.9973;RSQ=0.7773;ERATE=0.0007;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16777298 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.666;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.5978;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16777423 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.6636;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16777485 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0095;AVGPOST=0.9994;RSQ=0.9714;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 16777511 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5320;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16777632 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16777722 . CATT C 1351 PASS INDEL;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0084;AVGPOST=0.9989;RSQ=0.9367;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 16777782 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.774;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7415;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16777805 . TTG T 114 PASS INDEL;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0021;AVGPOST=0.9991;RSQ=0.8096;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16777812 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2471;AVGPOST=0.9981;RSQ=0.9964;ERATE=0.0004;THETA=0.0003;AC=540;AN=2184 GT:DS:GL:BD 0.24725275 0
1 16777817 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0222;AVGPOST=0.9995;RSQ=0.9908;ERATE=0.0003;THETA=0.0003;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 16777874 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6714;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16777904 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16777924 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16777998 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16778055 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0098;AVGPOST=0.9993;RSQ=0.9667;ERATE=0.0004;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 16778078 . CATT C 73 PASS INDEL;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6383;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16778095 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8692;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16778150 . TGA T 205 PASS INDEL;BAVGPOST=0.999;BRSQ=0.761;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.6653;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16778196 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16778265 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4279;AVGPOST=0.9995;RSQ=0.9993;ERATE=0.0003;THETA=0.0003;AC=934;AN=2184 GT:DS:GL:BD 0.42765567 0
1 16778370 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16778375 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16778376 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 16778393 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0013;AVGPOST=0.9999;RSQ=0.9672;ERATE=0.0007;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16778398 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16778405 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16778447 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16778470 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8316;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16778549 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16778624 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8498;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16778629 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9809;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16778731 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7604;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16778893 . AC A 1616 PASS INDEL;BAVGPOST=0.987;BRSQ=0.957;LDAF=0.1398;AVGPOST=0.9891;RSQ=0.9683;ERATE=0.0006;THETA=0.0003;AC=308;AN=2184 GT:DS:GL:BD 0.14102565 0
1 16778896 . CA C 18495 PASS INDEL;BAVGPOST=0.991;BRSQ=0.973;LDAF=0.1419;AVGPOST=0.9915;RSQ=0.9749;ERATE=0.0005;THETA=0.0003;AC=309;AN=2184 GT:DS:GL:BD 0.14148352 0
1 16779000 . GAGA G 156 PASS INDEL;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.4345;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16779079 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8481;ERATE=0.0009;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16779103 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0355;AVGPOST=0.9975;RSQ=0.9735;ERATE=0.0003;THETA=0.0004;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 16779111 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.870;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8275;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16779120 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0235;AVGPOST=0.9986;RSQ=0.9790;ERATE=0.0003;THETA=0.0004;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 16779185 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0260;AVGPOST=0.9978;RSQ=0.9711;ERATE=0.0003;THETA=0.0002;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 16779197 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.6515;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16779199 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0042;AVGPOST=0.9980;RSQ=0.8570;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16779334 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.733;LDAF=0.0031;AVGPOST=0.9959;RSQ=0.4906;ERATE=0.0009;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16779335 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0220;AVGPOST=0.9989;RSQ=0.9764;ERATE=0.0005;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 16779388 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0158;AVGPOST=0.9973;RSQ=0.9294;ERATE=0.0006;THETA=0.0009;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 16779436 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.807;LDAF=0.0031;AVGPOST=0.9976;RSQ=0.6937;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16779638 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0050;AVGPOST=0.9970;RSQ=0.7374;ERATE=0.0007;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16779707 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.648;LDAF=0.0040;AVGPOST=0.9941;RSQ=0.3742;ERATE=0.0008;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16779901 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.709;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6460;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16780047 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0062;AVGPOST=0.9995;RSQ=0.9595;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 16780060 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.976;LDAF=0.2064;AVGPOST=0.9722;RSQ=0.9440;ERATE=0.0028;THETA=0.0003;AC=446;AN=2184 GT:DS:GL:BD 0.20421246 0
1 16780072 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6282;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16780108 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.976;LDAF=0.4381;AVGPOST=0.9854;RSQ=0.9773;ERATE=0.0029;THETA=0.0002;AC=959;AN=2184 GT:DS:GL:BD 0.43910256 0
1 16780431 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0037;AVGPOST=0.9971;RSQ=0.7106;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16780545 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.7272;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16780615 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0102;AVGPOST=0.9996;RSQ=0.9864;ERATE=0.0004;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 16780617 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.546;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4385;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16780623 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0029;AVGPOST=0.9955;RSQ=0.3851;ERATE=0.0008;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16780624 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.986;LDAF=0.1485;AVGPOST=0.9971;RSQ=0.9917;ERATE=0.0005;THETA=0.0003;AC=323;AN=2184 GT:DS:GL:BD 0.14789377 0
1 16780720 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0024;AVGPOST=0.9978;RSQ=0.6182;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16780728 . A AT 70 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0020;AVGPOST=0.9978;RSQ=0.5573;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16780843 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.981;LDAF=0.0387;AVGPOST=0.9985;RSQ=0.9844;ERATE=0.0004;THETA=0.0005;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 16780844 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4967;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16780847 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16780860 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0101;AVGPOST=0.9999;RSQ=0.9949;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 16781026 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.973;LDAF=0.6875;AVGPOST=0.9876;RSQ=0.9804;ERATE=0.0014;THETA=0.0001;AC=1504;AN=2184 GT:DS:GL:BD 0.68864471 1
1 16781351 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.846;LDAF=0.0035;AVGPOST=0.9978;RSQ=0.7456;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16781379 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0382;AVGPOST=0.9993;RSQ=0.9947;ERATE=0.0003;THETA=0.0005;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 16781409 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0102;AVGPOST=0.9998;RSQ=0.9916;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 16781446 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.970;LDAF=0.1274;AVGPOST=0.9921;RSQ=0.9770;ERATE=0.0003;THETA=0.0004;AC=276;AN=2184 GT:DS:GL:BD 0.12637363 0
1 16781447 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.987;LDAF=0.6270;AVGPOST=0.9941;RSQ=0.9911;ERATE=0.0003;THETA=0.0003;AC=1369;AN=2184 GT:DS:GL:BD 0.62683153 1
1 16781448 . GA G 51 PASS INDEL;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16781690 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0041;AVGPOST=0.9948;RSQ=0.5418;ERATE=0.0007;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16781839 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.468;LDAF=0.0019;AVGPOST=0.9970;RSQ=0.4266;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16781879 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0201;AVGPOST=0.9979;RSQ=0.9585;ERATE=0.0003;THETA=0.0008;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 16781997 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0184;AVGPOST=0.9995;RSQ=0.9893;ERATE=0.0003;THETA=0.0002;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 16782053 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7202;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16782064 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9279;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16782090 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9682;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16782236 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0110;AVGPOST=0.9999;RSQ=0.9954;ERATE=0.0003;THETA=0.0010;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 16782322 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8499;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16782448 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16782623 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.746;LDAF=0.0147;AVGPOST=0.9932;RSQ=0.8296;ERATE=0.0004;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 16782692 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.972;LDAF=0.6711;AVGPOST=0.9903;RSQ=0.9831;ERATE=0.0017;THETA=0.0004;AC=1468;AN=2184 GT:DS:GL:BD 0.67216116 1
1 16782720 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.712;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6333;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16782812 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0138;AVGPOST=0.9979;RSQ=0.9345;ERATE=0.0005;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 16782824 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4293;AVGPOST=0.9987;RSQ=0.9979;ERATE=0.0005;THETA=0.0004;AC=938;AN=2184 GT:DS:GL:BD 0.42948717 0
1 16782883 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7604;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16782920 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0268;AVGPOST=0.9990;RSQ=0.9861;ERATE=0.0004;THETA=0.0003;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 16782995 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4291;AVGPOST=0.9971;RSQ=0.9956;ERATE=0.0004;THETA=0.0003;AC=938;AN=2184 GT:DS:GL:BD 0.42948717 0
1 16783192 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16783208 . CAG C 19 PASS INDEL;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6282;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16783225 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16783234 . C CT 18 PASS INDEL;BAVGPOST=1.000;BRSQ=0.741;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5287;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16783297 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0042;AVGPOST=0.9980;RSQ=0.8579;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16783335 . T TACAGGTGCAC 2692 PASS INDEL;BAVGPOST=0.997;BRSQ=0.752;LDAF=0.0064;AVGPOST=0.9950;RSQ=0.6898;ERATE=0.0008;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16783367 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0096;AVGPOST=0.9986;RSQ=0.9414;ERATE=0.0005;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 16783397 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.787;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.6549;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16783404 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.602;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.5914;ERATE=0.0006;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16783428 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9143;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16783659 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0230;AVGPOST=0.9966;RSQ=0.9383;ERATE=0.0007;THETA=0.0003;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 16783698 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0109;AVGPOST=0.9985;RSQ=0.9637;ERATE=0.0004;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 16783722 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0359;AVGPOST=0.9984;RSQ=0.9848;ERATE=0.0004;THETA=0.0003;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 16783857 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0228;AVGPOST=0.9989;RSQ=0.9818;ERATE=0.0003;THETA=0.0002;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 16783933 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5269;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16783953 . CAAAT C 62 PASS INDEL;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7689;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16783965 . C CA 75 PASS INDEL;BAVGPOST=0.994;BRSQ=0.481;LDAF=0.0156;AVGPOST=0.9785;RSQ=0.4648;ERATE=0.0048;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16783980 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16784185 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.684;LDAF=0.0046;AVGPOST=0.9989;RSQ=0.9003;ERATE=0.0004;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16784269 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0021;AVGPOST=0.9989;RSQ=0.7633;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16784321 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.6744;AVGPOST=0.9970;RSQ=0.9943;ERATE=0.0008;THETA=0.0004;AC=1472;AN=2184 GT:DS:GL:BD 0.67399269 1
1 16784393 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.677;LDAF=0.0459;AVGPOST=0.9569;RSQ=0.6148;ERATE=0.0125;THETA=0.0004;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 16784448 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0299;AVGPOST=0.9966;RSQ=0.9587;ERATE=0.0005;THETA=0.0004;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 16784515 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0093;AVGPOST=0.9974;RSQ=0.8874;ERATE=0.0004;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 16784566 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16784582 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16784591 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.8799;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16784802 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6786;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16784861 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.975;LDAF=0.1440;AVGPOST=0.9904;RSQ=0.9715;ERATE=0.0006;THETA=0.0003;AC=315;AN=2184 GT:DS:GL:BD 0.14423077 0
1 16784913 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0354;AVGPOST=0.9995;RSQ=0.9935;ERATE=0.0003;THETA=0.0003;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 16785063 . GCGA G 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4905;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16785327 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0059;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0011;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 16785342 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16785378 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16785394 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 16785455 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16785564 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0315;AVGPOST=0.9998;RSQ=0.9978;ERATE=0.0003;THETA=0.0004;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 16785599 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16785791 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16785978 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16786087 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.754;LDAF=0.9976;AVGPOST=0.9997;RSQ=0.9449;ERATE=0.0003;THETA=0.0004;AC=2179;AN=2184 GT:DS:GL:BD 0.99771065 1
1 16786114 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9260;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16786168 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0424;AVGPOST=0.9993;RSQ=0.9928;ERATE=0.0003;THETA=0.0003;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 16786249 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.754;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.5626;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16786250 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.774;LDAF=0.0030;AVGPOST=0.9985;RSQ=0.8027;ERATE=0.0005;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16786529 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0215;AVGPOST=0.9997;RSQ=0.9932;ERATE=0.0003;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 16786604 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.974;LDAF=0.0329;AVGPOST=0.9978;RSQ=0.9693;ERATE=0.0004;THETA=0.0006;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 16786636 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.988;LDAF=0.2022;AVGPOST=0.9922;RSQ=0.9843;ERATE=0.0006;THETA=0.0004;AC=440;AN=2184 GT:DS:GL:BD 0.20146520 0
1 16786928 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6392;AVGPOST=0.9981;RSQ=0.9965;ERATE=0.0004;THETA=0.0008;AC=1397;AN=2184 GT:DS:GL:BD 0.63965201 1
1 16786935 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0672;AVGPOST=0.9987;RSQ=0.9916;ERATE=0.0003;THETA=0.0004;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 16786995 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0114;AVGPOST=0.9985;RSQ=0.9418;ERATE=0.0004;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 16786998 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16787010 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.753;LDAF=0.0198;AVGPOST=0.9927;RSQ=0.8510;ERATE=0.0006;THETA=0.0005;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 16787029 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.712;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.3761;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16787059 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.3968;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16787220 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8272;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16787272 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8928;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16787459 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.983;LDAF=0.0395;AVGPOST=0.9977;RSQ=0.9789;ERATE=0.0004;THETA=0.0003;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 16787481 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.821;LDAF=0.0181;AVGPOST=0.9919;RSQ=0.8163;ERATE=0.0005;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 16787519 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.779;LDAF=0.0023;AVGPOST=0.9973;RSQ=0.4877;ERATE=0.0007;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16787703 . GAGAA G 42 PASS INDEL;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4675;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16787712 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0037;AVGPOST=0.9995;RSQ=0.9390;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16787799 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0035;AVGPOST=0.9983;RSQ=0.8509;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16787870 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0013;AVGPOST=0.9999;RSQ=0.9689;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16788015 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.989;LDAF=0.4162;AVGPOST=0.9894;RSQ=0.9836;ERATE=0.0023;THETA=0.0004;AC=913;AN=2184 GT:DS:GL:BD 0.41804031 0
1 16788019 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16788052 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4401;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16788119 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0066;AVGPOST=0.9984;RSQ=0.9063;ERATE=0.0003;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 16788184 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.953;LDAF=0.4120;AVGPOST=0.9577;RSQ=0.9325;ERATE=0.0102;THETA=0.0006;AC=907;AN=2184 GT:DS:GL:BD 0.41529304 0
1 16788203 . AC A 156 PASS INDEL;BAVGPOST=0.999;BRSQ=0.702;LDAF=0.0021;AVGPOST=0.9976;RSQ=0.5513;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16788219 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0171;AVGPOST=0.9996;RSQ=0.9895;ERATE=0.0004;THETA=0.0005;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 16788228 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6802;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16788274 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5926;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16788293 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.860;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7590;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16788487 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0180;AVGPOST=0.9995;RSQ=0.9892;ERATE=0.0003;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 16788491 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5667;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16788515 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.6749;AVGPOST=0.9968;RSQ=0.9943;ERATE=0.0008;THETA=0.0002;AC=1472;AN=2184 GT:DS:GL:BD 0.67399269 1
1 16788624 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16788666 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7698;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16788824 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0018;AVGPOST=0.9993;RSQ=0.8638;ERATE=0.0006;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16788944 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16789076 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6347;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16789290 . AAG A 85 PASS INDEL;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7078;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16789486 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0102;AVGPOST=0.9996;RSQ=0.9864;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 16789577 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0354;AVGPOST=0.9995;RSQ=0.9939;ERATE=0.0003;THETA=0.0003;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 16789605 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.623;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5677;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16789620 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4524;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16789673 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6328;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16789682 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.0738;AVGPOST=0.9993;RSQ=0.9961;ERATE=0.0004;THETA=0.0002;AC=159;AN=2184 GT:DS:GL:BD 0.07280220 0
1 16789714 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6202;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16789912 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.769;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5804;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16789923 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.773;LDAF=0.0029;AVGPOST=0.9985;RSQ=0.7929;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16790054 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0039;AVGPOST=0.9991;RSQ=0.8947;ERATE=0.0005;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16790084 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.983;LDAF=0.6673;AVGPOST=0.9723;RSQ=0.9562;ERATE=0.0053;THETA=0.0004;AC=1464;AN=2184 GT:DS:GL:BD 0.67032969 1
1 16790098 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.753;LDAF=0.0070;AVGPOST=0.9968;RSQ=0.7985;ERATE=0.0004;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 16790114 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0023;AVGPOST=0.9983;RSQ=0.7124;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16790255 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0364;AVGPOST=0.9973;RSQ=0.9709;ERATE=0.0007;THETA=0.0006;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 16790272 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0053;AVGPOST=0.9939;RSQ=0.5741;ERATE=0.0006;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16790273 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.8848;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16790312 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0355;AVGPOST=0.9992;RSQ=0.9915;ERATE=0.0003;THETA=0.0002;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 16790336 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.6750;AVGPOST=0.9965;RSQ=0.9935;ERATE=0.0006;THETA=0.0004;AC=1476;AN=2184 GT:DS:GL:BD 0.67582417 1
1 16790427 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4800;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16790564 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9562;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16790581 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0020;AVGPOST=0.9994;RSQ=0.8855;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16790661 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16790666 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0352;AVGPOST=0.9998;RSQ=0.9978;ERATE=0.0003;THETA=0.0006;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 16790741 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.9078;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16790770 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0207;AVGPOST=0.9996;RSQ=0.9919;ERATE=0.0003;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 16790901 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6383;AVGPOST=0.9979;RSQ=0.9966;ERATE=0.0005;THETA=0.0002;AC=1394;AN=2184 GT:DS:GL:BD 0.63827837 1
1 16790903 . AT A 91 PASS INDEL;BAVGPOST=0.999;BRSQ=0.733;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6611;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16791016 . T TG 904 PASS INDEL;BAVGPOST=0.995;BRSQ=0.874;LDAF=0.0227;AVGPOST=0.9975;RSQ=0.9543;ERATE=0.0005;THETA=0.0004;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 16791286 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.979;LDAF=0.4456;AVGPOST=0.9929;RSQ=0.9890;ERATE=0.0005;THETA=0.0004;AC=974;AN=2184 GT:DS:GL:BD 0.44597068 0
1 16791363 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0189;AVGPOST=0.9987;RSQ=0.9709;ERATE=0.0004;THETA=0.0003;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 16791384 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.978;LDAF=0.6622;AVGPOST=0.9790;RSQ=0.9678;ERATE=0.0032;THETA=0.0003;AC=1451;AN=2184 GT:DS:GL:BD 0.66437727 1
1 16791390 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0353;AVGPOST=0.9996;RSQ=0.9956;ERATE=0.0004;THETA=0.0005;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 16791399 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0202;AVGPOST=0.9981;RSQ=0.9634;ERATE=0.0004;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 16791413 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0354;AVGPOST=0.9995;RSQ=0.9942;ERATE=0.0004;THETA=0.0003;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 16791445 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7511;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16791461 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.7252;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16791499 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0024;AVGPOST=0.9980;RSQ=0.7196;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16791502 . AC A 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6404;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16791531 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6380;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16791542 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9829;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16791547 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.769;LDAF=0.0026;AVGPOST=0.9984;RSQ=0.8044;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16791580 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.733;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6504;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16791678 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7872;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16791683 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0087;AVGPOST=0.9979;RSQ=0.9075;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 16791760 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0017;AVGPOST=0.9987;RSQ=0.6822;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16791801 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.762;LDAF=0.0043;AVGPOST=0.9976;RSQ=0.7601;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16791815 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0052;AVGPOST=0.9978;RSQ=0.8767;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16791867 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.755;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7834;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16791967 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6075;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16791978 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0126;AVGPOST=0.9993;RSQ=0.9724;ERATE=0.0004;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 16792059 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16792304 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6639;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16792335 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0206;AVGPOST=0.9995;RSQ=0.9879;ERATE=0.0003;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 16792488 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7102;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16792587 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16792608 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5277;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16792631 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7457;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16792700 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6616;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16792757 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5932;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16792824 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.849;LDAF=0.0121;AVGPOST=0.9968;RSQ=0.8970;ERATE=0.0003;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 16792925 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0035;AVGPOST=0.9974;RSQ=0.6942;ERATE=0.0008;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16792942 . CTGTAA C 381 PASS INDEL;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0051;AVGPOST=0.9982;RSQ=0.8457;ERATE=0.0005;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16792943 . TGTAATCC T 1193 PASS INDEL;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0050;AVGPOST=0.9991;RSQ=0.9160;ERATE=0.0005;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16792944 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5926;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16792967 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.788;LDAF=0.0046;AVGPOST=0.9982;RSQ=0.8355;ERATE=0.0005;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16793018 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.630;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5706;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16793110 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5492;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16793121 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8908;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16793220 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6727;AVGPOST=0.9982;RSQ=0.9966;ERATE=0.0003;THETA=0.0001;AC=1469;AN=2184 GT:DS:GL:BD 0.67261904 1
1 16793251 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0019;AVGPOST=0.9994;RSQ=0.8531;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16793349 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.976;LDAF=0.0355;AVGPOST=0.9985;RSQ=0.9826;ERATE=0.0005;THETA=0.0006;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 16793399 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.6368;AVGPOST=0.9899;RSQ=0.9838;ERATE=0.0028;THETA=0.0003;AC=1391;AN=2184 GT:DS:GL:BD 0.63690478 1
1 16793473 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0352;AVGPOST=0.9999;RSQ=0.9983;ERATE=0.0003;THETA=0.0007;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 16793604 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4856;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16793608 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0068;AVGPOST=0.9950;RSQ=0.7227;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16793645 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0184;AVGPOST=0.9994;RSQ=0.9855;ERATE=0.0003;THETA=0.0004;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 16793865 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7605;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16793932 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5576;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16793949 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4291;AVGPOST=0.9978;RSQ=0.9965;ERATE=0.0005;THETA=0.0003;AC=936;AN=2184 GT:DS:GL:BD 0.42857143 0
1 16794091 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0037;AVGPOST=0.9980;RSQ=0.7772;ERATE=0.0013;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16794115 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1402;AVGPOST=0.9974;RSQ=0.9914;ERATE=0.0004;THETA=0.0003;AC=308;AN=2184 GT:DS:GL:BD 0.14102565 0
1 16794147 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0191;AVGPOST=0.9993;RSQ=0.9861;ERATE=0.0003;THETA=0.0003;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 16794158 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7748;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16794209 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0020;AVGPOST=0.9980;RSQ=0.6246;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16794254 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.921;LDAF=0.0138;AVGPOST=0.9977;RSQ=0.9288;ERATE=0.0006;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 16794270 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0184;AVGPOST=0.9998;RSQ=0.9946;ERATE=0.0003;THETA=0.0004;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 16794377 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0380;AVGPOST=0.9982;RSQ=0.9813;ERATE=0.0004;THETA=0.0003;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 16794385 . TTTC T 352 PASS INDEL;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0037;AVGPOST=0.9974;RSQ=0.7263;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16794419 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0047;AVGPOST=0.9983;RSQ=0.8588;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16794524 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0098;AVGPOST=0.9995;RSQ=0.9799;ERATE=0.0003;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 16794658 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=0.9999;RSQ=0.9894;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16794721 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5935;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16794840 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16794917 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4292;AVGPOST=0.9985;RSQ=0.9977;ERATE=0.0004;THETA=0.0004;AC=938;AN=2184 GT:DS:GL:BD 0.42948717 0
1 16794967 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5354;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16795075 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6995;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16795078 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6707;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16795107 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0183;AVGPOST=0.9999;RSQ=0.9978;ERATE=0.0003;THETA=0.0004;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 16795127 . CTTCA C 670 PASS INDEL;BAVGPOST=0.999;BRSQ=0.890;LDAF=0.0066;AVGPOST=0.9957;RSQ=0.7594;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16795171 rs34445490 G GT 14576 PASS INDEL;BAVGPOST=0.904;BRSQ=0.826;LDAF=0.5443;AVGPOST=0.8554;RSQ=0.7937;ERATE=0.0572;THETA=0.0003;AC=1236;AN=2184 GT:DS:GL:BD 0.56593406 1
1 16795192 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6400;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16795200 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.0377;AVGPOST=0.9971;RSQ=0.9712;ERATE=0.0004;THETA=0.0003;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 16795201 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.985;LDAF=0.1986;AVGPOST=0.9924;RSQ=0.9835;ERATE=0.0005;THETA=0.0011;AC=435;AN=2184 GT:DS:GL:BD 0.19917582 0
1 16795405 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16795528 . AGGGCAGG A 881 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9995;RSQ=0.9375;ERATE=0.0005;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16795596 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5980;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16795606 . T TCA 45 PASS INDEL;BAVGPOST=0.998;BRSQ=0.852;LDAF=0.0047;AVGPOST=0.9959;RSQ=0.6682;ERATE=0.0018;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16795685 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6718;AVGPOST=0.9967;RSQ=0.9948;ERATE=0.0005;THETA=0.0004;AC=1469;AN=2184 GT:DS:GL:BD 0.67261904 1
1 16795692 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7129;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16795832 . T TCAG 10951 PASS INDEL;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0356;AVGPOST=0.9990;RSQ=0.9897;ERATE=0.0004;THETA=0.0005;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 16795950 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.919;LDAF=0.0103;AVGPOST=0.9975;RSQ=0.8935;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 16796032 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7941;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16796064 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0353;AVGPOST=0.9997;RSQ=0.9961;ERATE=0.0003;THETA=0.0002;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 16796082 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.968;LDAF=0.0350;AVGPOST=0.9997;RSQ=0.9963;ERATE=0.0003;THETA=0.0005;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 16796135 . AT A 280 PASS INDEL;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0030;AVGPOST=0.9968;RSQ=0.5273;ERATE=0.0006;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16796154 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6004;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16796302 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5610;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16796308 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0089;AVGPOST=0.9992;RSQ=0.9645;ERATE=0.0003;THETA=0.0009;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 16796451 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0355;AVGPOST=0.9994;RSQ=0.9934;ERATE=0.0003;THETA=0.0003;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 16796579 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.968;LDAF=0.0165;AVGPOST=0.9980;RSQ=0.9648;ERATE=0.0003;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 16796633 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0184;AVGPOST=0.9997;RSQ=0.9935;ERATE=0.0003;THETA=0.0004;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 16796708 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0049;AVGPOST=0.9990;RSQ=0.9130;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16796721 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3996;AVGPOST=0.9989;RSQ=0.9980;ERATE=0.0005;THETA=0.0002;AC=872;AN=2184 GT:DS:GL:BD 0.39926741 0
1 16796813 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7237;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16796860 . CTGCG C 1543 PASS INDEL;BAVGPOST=0.997;BRSQ=0.958;LDAF=0.0261;AVGPOST=0.9968;RSQ=0.9525;ERATE=0.0004;THETA=0.0003;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 16796944 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6736;AVGPOST=0.9987;RSQ=0.9974;ERATE=0.0006;THETA=0.0004;AC=1470;AN=2184 GT:DS:GL:BD 0.67307693 1
1 16796976 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0100;AVGPOST=0.9988;RSQ=0.9427;ERATE=0.0005;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 16797022 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9137;ERATE=0.0005;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16797122 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4562;AVGPOST=0.9992;RSQ=0.9985;ERATE=0.0004;THETA=0.0027;AC=994;AN=2184 GT:DS:GL:BD 0.45512819 0
1 16797226 . CACAT C 140 PASS INDEL;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5442;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16797266 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0022;AVGPOST=0.9991;RSQ=0.8166;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16797452 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.734;LDAF=0.0030;AVGPOST=0.9964;RSQ=0.5366;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16797485 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.960;LDAF=0.4616;AVGPOST=0.9846;RSQ=0.9766;ERATE=0.0013;THETA=0.0003;AC=1009;AN=2184 GT:DS:GL:BD 0.46199635 0
1 16797520 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.666;LDAF=0.0018;AVGPOST=0.9981;RSQ=0.5157;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16797523 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.750;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.6007;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16797572 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.681;LDAF=0.0023;AVGPOST=0.9962;RSQ=0.2903;ERATE=0.0009;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16797588 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.975;LDAF=0.3757;AVGPOST=0.9862;RSQ=0.9782;ERATE=0.0019;THETA=0.0004;AC=824;AN=2184 GT:DS:GL:BD 0.37728938 0
1 16797695 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8313;ERATE=0.0006;THETA=0.0057;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16797719 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.747;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0003;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16797724 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.6037;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16797745 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8194;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16797756 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.958;LDAF=0.7122;AVGPOST=0.9688;RSQ=0.9467;ERATE=0.0092;THETA=0.0004;AC=1560;AN=2184 GT:DS:GL:BD 0.71428573 1
1 16797928 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0018;AVGPOST=0.9981;RSQ=0.5252;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16797968 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0118;AVGPOST=0.9982;RSQ=0.9375;ERATE=0.0004;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 16798056 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16798111 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5939;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16798241 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0269;AVGPOST=0.9993;RSQ=0.9902;ERATE=0.0003;THETA=0.0005;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 16798412 . T TG 101 PASS INDEL;BAVGPOST=0.998;BRSQ=0.497;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6932;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16798504 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16798528 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0348;AVGPOST=0.9998;RSQ=0.9981;ERATE=0.0003;THETA=0.0003;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 16798560 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6434;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16798593 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.734;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16798620 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.8946;ERATE=0.0005;THETA=0.0027;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16798669 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16798670 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.974;LDAF=0.0266;AVGPOST=0.9989;RSQ=0.9842;ERATE=0.0004;THETA=0.0005;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 16798671 . A AG 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6580;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16798893 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0029;AVGPOST=0.9990;RSQ=0.8813;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16798902 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.6706;AVGPOST=0.9968;RSQ=0.9940;ERATE=0.0005;THETA=0.0004;AC=1463;AN=2184 GT:DS:GL:BD 0.66987181 1
1 16798915 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0047;AVGPOST=0.9995;RSQ=0.9549;ERATE=0.0003;THETA=0.0013;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16799028 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.872;LDAF=0.0112;AVGPOST=0.9972;RSQ=0.8953;ERATE=0.0004;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 16799071 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16799230 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.865;LDAF=0.0065;AVGPOST=0.9963;RSQ=0.7630;ERATE=0.0019;THETA=0.0017;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16799262 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0046;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16799301 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16799310 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6208;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16799351 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16799358 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7539;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16799432 . TCTTTA T 183 PASS INDEL;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7196;ERATE=0.0003;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16799452 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6817;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16799578 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8269;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16799587 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7519;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16799596 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0108;AVGPOST=0.9979;RSQ=0.9201;ERATE=0.0003;THETA=0.0006;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 16799643 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0022;AVGPOST=0.9982;RSQ=0.6836;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16799670 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7199;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16799673 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0351;AVGPOST=0.9989;RSQ=0.9897;ERATE=0.0003;THETA=0.0004;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 16799878 . CTTCT C 502 PASS INDEL;BAVGPOST=0.999;BRSQ=0.894;LDAF=0.0060;AVGPOST=0.9978;RSQ=0.8455;ERATE=0.0006;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 16799883 . TTA T 24 PASS INDEL;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16800122 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16800158 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6881;ERATE=0.0003;THETA=0.0024;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16800161 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16800229 . CT C 72 PASS INDEL;BAVGPOST=0.991;BRSQ=0.499;LDAF=0.0519;AVGPOST=0.9276;RSQ=0.4352;ERATE=0.0072;THETA=0.0005;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 16800231 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7129;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16800232 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0068;AVGPOST=0.9961;RSQ=0.7794;ERATE=0.0007;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 16800249 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0043;AVGPOST=0.9994;RSQ=0.9315;ERATE=0.0004;THETA=0.0022;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16800288 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0100;AVGPOST=0.9994;RSQ=0.9757;ERATE=0.0003;THETA=0.0012;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 16800308 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0024;AVGPOST=0.9993;RSQ=0.8718;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16800556 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0029;AVGPOST=0.9977;RSQ=0.7147;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16800793 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.721;LDAF=0.0007;AVGPOST=0.9989;RSQ=0.3215;ERATE=0.0005;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 16800794 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0036;AVGPOST=0.9990;RSQ=0.8689;ERATE=0.0004;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16800801 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.683;LDAF=0.0063;AVGPOST=0.9944;RSQ=0.6236;ERATE=0.0006;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16800844 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.748;LDAF=0.0045;AVGPOST=0.9968;RSQ=0.7212;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16800860 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.709;LDAF=0.0031;AVGPOST=0.9980;RSQ=0.7432;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16800989 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.832;LDAF=0.0093;AVGPOST=0.9929;RSQ=0.6818;ERATE=0.0007;THETA=0.0020;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 16801007 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.913;LDAF=0.0135;AVGPOST=0.9954;RSQ=0.8462;ERATE=0.0009;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 16801091 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.828;LDAF=0.0226;AVGPOST=0.9909;RSQ=0.8427;ERATE=0.0008;THETA=0.0006;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 16801097 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.821;LDAF=0.0037;AVGPOST=0.9986;RSQ=0.8477;ERATE=0.0005;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16801118 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8175;ERATE=0.0004;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16801153 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5844;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16801160 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4257;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16801190 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.697;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4605;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16801200 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.742;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5896;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16801207 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.731;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6709;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16801293 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.697;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.3939;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16801453 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.711;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.5917;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16801457 . C CAAACA 262 PASS INDEL;BAVGPOST=0.996;BRSQ=0.499;LDAF=0.0146;AVGPOST=0.9842;RSQ=0.5454;ERATE=0.0014;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 16801477 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0343;AVGPOST=0.9971;RSQ=0.9666;ERATE=0.0004;THETA=0.0006;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 16801489 . C CA 84 PASS INDEL;BAVGPOST=0.999;BRSQ=0.715;LDAF=0.0260;AVGPOST=0.9715;RSQ=0.6054;ERATE=0.0017;THETA=0.0005;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 16801543 . TAAG T 27 PASS INDEL;BAVGPOST=0.998;BRSQ=0.328;LDAF=0.0423;AVGPOST=0.9435;RSQ=0.4813;ERATE=0.0040;THETA=0.0004;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 16801673 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.801;LDAF=0.0584;AVGPOST=0.9606;RSQ=0.7493;ERATE=0.0086;THETA=0.0005;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 16801785 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.922;BRSQ=0.622;LDAF=0.1498;AVGPOST=0.8645;RSQ=0.5577;ERATE=0.0528;THETA=0.0009;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 16801858 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.758;LDAF=0.0066;AVGPOST=0.9936;RSQ=0.5999;ERATE=0.0008;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16801893 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.417;LDAF=0.0397;AVGPOST=0.9483;RSQ=0.4381;ERATE=0.0075;THETA=0.0005;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 16801969 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0103;AVGPOST=0.9942;RSQ=0.7929;ERATE=0.0009;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 16801972 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0277;AVGPOST=0.9968;RSQ=0.9542;ERATE=0.0007;THETA=0.0003;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 16802016 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.513;LDAF=0.0054;AVGPOST=0.9968;RSQ=0.7533;ERATE=0.0007;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16802159 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5249;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16802270 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.845;LDAF=0.0060;AVGPOST=0.9975;RSQ=0.8419;ERATE=0.0004;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 16802271 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.740;LDAF=0.0092;AVGPOST=0.9956;RSQ=0.8138;ERATE=0.0007;THETA=0.0008;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 16802342 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.496;LDAF=0.0102;AVGPOST=0.9899;RSQ=0.6093;ERATE=0.0019;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 16802391 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.965;LDAF=0.0264;AVGPOST=0.9992;RSQ=0.9884;ERATE=0.0004;THETA=0.0005;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 16802392 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0359;AVGPOST=0.9995;RSQ=0.9942;ERATE=0.0003;THETA=0.0004;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 16802464 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4177;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16802533 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.980;LDAF=0.0349;AVGPOST=0.9981;RSQ=0.9799;ERATE=0.0005;THETA=0.0006;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 16802575 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0031;AVGPOST=0.9951;RSQ=0.4601;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16802622 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0339;AVGPOST=0.9957;RSQ=0.9457;ERATE=0.0014;THETA=0.0004;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 16802828 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0046;AVGPOST=0.9984;RSQ=0.8700;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16802837 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.759;LDAF=0.0052;AVGPOST=0.9979;RSQ=0.8405;ERATE=0.0006;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16802890 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.3982;AVGPOST=0.9953;RSQ=0.9925;ERATE=0.0005;THETA=0.0006;AC=871;AN=2184 GT:DS:GL:BD 0.39880952 0
1 16802899 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.617;LDAF=0.0213;AVGPOST=0.9820;RSQ=0.6705;ERATE=0.0090;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 16802956 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6248;ERATE=0.0006;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16803003 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0125;AVGPOST=0.9995;RSQ=0.9824;ERATE=0.0003;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 16803159 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.6992;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16803263 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.691;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5979;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16803267 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.911;BRSQ=0.856;LDAF=0.6010;AVGPOST=0.8856;RSQ=0.8344;ERATE=0.0194;THETA=0.0005;AC=1369;AN=2184 GT:DS:GL:BD 0.62683153 1
1 16803449 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9343;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16803458 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0101;AVGPOST=0.9982;RSQ=0.9279;ERATE=0.0006;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 16803482 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.963;LDAF=0.0360;AVGPOST=0.9928;RSQ=0.9206;ERATE=0.0006;THETA=0.0004;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 16803536 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.747;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7529;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16803943 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.662;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4099;ERATE=0.0007;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16803948 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.655;LDAF=0.0024;AVGPOST=0.9984;RSQ=0.7109;ERATE=0.0006;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16804028 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0358;AVGPOST=0.9975;RSQ=0.9742;ERATE=0.0005;THETA=0.0004;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 16804175 . CCA C 141 PASS INDEL;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0044;AVGPOST=0.9939;RSQ=0.4266;ERATE=0.0010;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16804198 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.567;LDAF=0.0040;AVGPOST=0.9950;RSQ=0.4963;ERATE=0.0009;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16804226 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.961;LDAF=0.0372;AVGPOST=0.9966;RSQ=0.9668;ERATE=0.0004;THETA=0.0005;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 16804263 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0266;AVGPOST=0.9990;RSQ=0.9853;ERATE=0.0003;THETA=0.0005;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 16804274 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0096;AVGPOST=0.9990;RSQ=0.9648;ERATE=0.0003;THETA=0.0007;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 16804298 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0093;AVGPOST=0.9986;RSQ=0.9421;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 16804341 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.987;LDAF=0.6595;AVGPOST=0.9876;RSQ=0.9813;ERATE=0.0007;THETA=0.0004;AC=1441;AN=2184 GT:DS:GL:BD 0.65979856 1
1 16804383 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7024;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16804438 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.986;LDAF=0.2097;AVGPOST=0.9912;RSQ=0.9820;ERATE=0.0007;THETA=0.0064;AC=458;AN=2184 GT:DS:GL:BD 0.20970696 0
1 16804551 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.679;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0084;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16804601 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.690;LDAF=0.0019;AVGPOST=0.9974;RSQ=0.5293;ERATE=0.0004;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16804623 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0198;AVGPOST=0.9985;RSQ=0.9667;ERATE=0.0004;THETA=0.0016;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 16804624 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4877;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16804676 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.6475;ERATE=0.0005;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16804683 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0213;AVGPOST=0.9985;RSQ=0.9714;ERATE=0.0004;THETA=0.0034;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 16804713 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.635;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5467;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16804745 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.953;LDAF=0.4121;AVGPOST=0.9798;RSQ=0.9699;ERATE=0.0004;THETA=0.0006;AC=906;AN=2184 GT:DS:GL:BD 0.41483516 0
1 16804753 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.952;LDAF=0.4118;AVGPOST=0.9788;RSQ=0.9682;ERATE=0.0004;THETA=0.0009;AC=905;AN=2184 GT:DS:GL:BD 0.41437730 0
1 16804875 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0357;AVGPOST=0.9978;RSQ=0.9744;ERATE=0.0005;THETA=0.0010;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 16804965 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9361;ERATE=0.0004;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16805055 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7706;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16805065 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0348;AVGPOST=0.9994;RSQ=0.9931;ERATE=0.0003;THETA=0.0004;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 16805181 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.952;LDAF=0.0403;AVGPOST=0.9952;RSQ=0.9522;ERATE=0.0005;THETA=0.0021;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 16805184 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.836;LDAF=0.0119;AVGPOST=0.9978;RSQ=0.9233;ERATE=0.0004;THETA=0.0052;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 16805453 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0342;AVGPOST=0.9982;RSQ=0.9803;ERATE=0.0004;THETA=0.0064;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 16805494 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.521;LDAF=0.0015;AVGPOST=0.9982;RSQ=0.5163;ERATE=0.0006;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16805668 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.4127;ERATE=0.0005;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16805690 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.649;LDAF=0.0020;AVGPOST=0.9970;RSQ=0.3786;ERATE=0.0006;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16805911 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0197;AVGPOST=0.9961;RSQ=0.9347;ERATE=0.0005;THETA=0.0029;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 16805983 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0033;AVGPOST=0.9984;RSQ=0.7899;ERATE=0.0004;THETA=0.0024;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16806035 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6188;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16806091 . CTTTTA C 201 PASS INDEL;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0050;AVGPOST=0.9976;RSQ=0.7819;ERATE=0.0005;THETA=0.0032;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16806161 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8299;ERATE=0.0003;THETA=0.0063;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16806187 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4074;ERATE=0.0004;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16806227 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.714;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.5124;ERATE=0.0007;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16806379 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0037;AVGPOST=0.9986;RSQ=0.8275;ERATE=0.0005;THETA=0.0025;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16806419 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7102;ERATE=0.0005;THETA=0.0085;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16806421 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.919;LDAF=0.1080;AVGPOST=0.9759;RSQ=0.9207;ERATE=0.0041;THETA=0.0067;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 16806442 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0400;AVGPOST=0.9969;RSQ=0.9694;ERATE=0.0004;THETA=0.0010;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 16806451 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.704;LDAF=0.0043;AVGPOST=0.9979;RSQ=0.8122;ERATE=0.0003;THETA=0.0088;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16806518 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.553;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5620;ERATE=0.0004;THETA=0.0056;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16806573 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.961;LDAF=0.1419;AVGPOST=0.9807;RSQ=0.9429;ERATE=0.0006;THETA=0.0073;AC=305;AN=2184 GT:DS:GL:BD 0.13965201 0
1 16806673 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0024;AVGPOST=0.9974;RSQ=0.5836;ERATE=0.0004;THETA=0.0022;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16806683 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.841;LDAF=0.0816;AVGPOST=0.9676;RSQ=0.8431;ERATE=0.0132;THETA=0.0090;AC=161;AN=2184 GT:DS:GL:BD 0.07371795 0
1 16806722 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0080;AVGPOST=0.9996;RSQ=0.9804;ERATE=0.0003;THETA=0.0104;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 16806728 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.879;LDAF=0.0376;AVGPOST=0.9889;RSQ=0.8744;ERATE=0.0041;THETA=0.0053;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 16806794 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.739;LDAF=0.0092;AVGPOST=0.9915;RSQ=0.6277;ERATE=0.0032;THETA=0.0056;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 16806808 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.775;LDAF=0.0054;AVGPOST=0.9964;RSQ=0.7537;ERATE=0.0007;THETA=0.0053;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16806835 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0075;AVGPOST=0.9973;RSQ=0.8532;ERATE=0.0004;THETA=0.0060;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16806868 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8715;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16806872 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.968;LDAF=0.0361;AVGPOST=0.9962;RSQ=0.9620;ERATE=0.0004;THETA=0.0012;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 16806875 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.969;LDAF=0.0361;AVGPOST=0.9971;RSQ=0.9709;ERATE=0.0003;THETA=0.0101;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 16806910 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8402;ERATE=0.0003;THETA=0.0030;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16806912 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7577;ERATE=0.0004;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16806925 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.985;LDAF=0.1708;AVGPOST=0.9904;RSQ=0.9762;ERATE=0.0005;THETA=0.0019;AC=369;AN=2184 GT:DS:GL:BD 0.16895604 0
1 16806947 . TA T 429 PASS INDEL;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0202;AVGPOST=0.9878;RSQ=0.7660;ERATE=0.0007;THETA=0.0066;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 16806957 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.982;LDAF=0.0437;AVGPOST=0.9981;RSQ=0.9850;ERATE=0.0003;THETA=0.0012;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 16806980 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0133;AVGPOST=0.9984;RSQ=0.9443;ERATE=0.0004;THETA=0.0038;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 16806994 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6343;ERATE=0.0003;THETA=0.0044;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16807018 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16807025 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.903;LDAF=0.0065;AVGPOST=0.9985;RSQ=0.9047;ERATE=0.0004;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 16807026 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7785;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16807082 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.619;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6684;ERATE=0.0003;THETA=0.0028;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16807112 . AC A 70 PASS INDEL;BAVGPOST=0.997;BRSQ=0.360;LDAF=0.0181;AVGPOST=0.9730;RSQ=0.3757;ERATE=0.0023;THETA=0.0060;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16807123 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0117;AVGPOST=0.9970;RSQ=0.8951;ERATE=0.0004;THETA=0.0050;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 16807217 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6020;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16807276 . A AC 14 PASS INDEL;BAVGPOST=0.999;BRSQ=0.591;LDAF=0.0099;AVGPOST=0.9888;RSQ=0.5839;ERATE=0.0009;THETA=0.0014;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 16807418 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.737;LDAF=0.0030;AVGPOST=0.9979;RSQ=0.7377;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16807426 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.973;LDAF=0.0236;AVGPOST=0.9981;RSQ=0.9699;ERATE=0.0004;THETA=0.0017;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 16807523 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4114;ERATE=0.0006;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16807544 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.791;LDAF=0.0031;AVGPOST=0.9975;RSQ=0.7066;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16807545 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0020;AVGPOST=0.9991;RSQ=0.8109;ERATE=0.0003;THETA=0.0017;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16807556 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0048;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16807661 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.767;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.5295;ERATE=0.0005;THETA=0.0051;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16807711 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.3943;ERATE=0.0005;THETA=0.0083;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16807728 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.843;LDAF=0.0043;AVGPOST=0.9988;RSQ=0.8715;ERATE=0.0004;THETA=0.0020;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16807776 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0057;AVGPOST=0.9995;RSQ=0.9637;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 16807784 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.913;LDAF=0.0077;AVGPOST=0.9992;RSQ=0.9516;ERATE=0.0003;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 16807838 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0014;AVGPOST=0.9979;RSQ=0.4797;ERATE=0.0004;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16807946 . AAAAC A 229 PASS INDEL;BAVGPOST=0.997;BRSQ=0.814;LDAF=0.0232;AVGPOST=0.9697;RSQ=0.5242;ERATE=0.0020;THETA=0.0056;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 16807968 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0292;AVGPOST=0.9989;RSQ=0.9826;ERATE=0.0004;THETA=0.0011;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 16808033 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6347;ERATE=0.0003;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16808077 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0005;AVGPOST=0.9993;RSQ=0.4221;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16808100 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.957;LDAF=0.0460;AVGPOST=0.9921;RSQ=0.9362;ERATE=0.0004;THETA=0.0010;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 16808114 rs71003287 C CT 2499 PASS INDEL;BAVGPOST=0.829;BRSQ=0.546;LDAF=0.2620;AVGPOST=0.7613;RSQ=0.4808;ERATE=0.0444;THETA=0.0041;AC=392;AN=2184 GT:DS:GL:BD 0.17948718 0
1 16808145 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.953;LDAF=0.0069;AVGPOST=0.9980;RSQ=0.8913;ERATE=0.0003;THETA=0.0068;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 16808225 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.963;LDAF=0.5404;AVGPOST=0.9685;RSQ=0.9624;ERATE=0.0009;THETA=0.0035;AC=1192;AN=2184 GT:DS:GL:BD 0.54578757 1
1 16808350 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.962;BRSQ=0.942;LDAF=0.5825;AVGPOST=0.9503;RSQ=0.9375;ERATE=0.0026;THETA=0.0004;AC=1282;AN=2184 GT:DS:GL:BD 0.58699632 1
1 16808411 . TTTTG T 79 PASS INDEL;BAVGPOST=0.983;BRSQ=0.260;LDAF=0.0369;AVGPOST=0.9833;RSQ=0.8397;ERATE=0.0004;THETA=0.0027;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 16808445 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.909;LDAF=0.0109;AVGPOST=0.9930;RSQ=0.7667;ERATE=0.0006;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 16808446 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.918;LDAF=0.0070;AVGPOST=0.9979;RSQ=0.8765;ERATE=0.0004;THETA=0.0016;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 16808485 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0046;AVGPOST=0.9973;RSQ=0.8200;ERATE=0.0005;THETA=0.0014;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16808510 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.793;LDAF=0.0035;AVGPOST=0.9987;RSQ=0.8437;ERATE=0.0003;THETA=0.0015;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16808527 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9403;ERATE=0.0004;THETA=0.0057;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16808544 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.675;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5172;ERATE=0.0007;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16808618 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.8887;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16808626 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.720;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6200;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16808692 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.910;LDAF=0.0117;AVGPOST=0.9979;RSQ=0.9213;ERATE=0.0003;THETA=0.0007;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 16808694 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.955;LDAF=0.9496;AVGPOST=0.9949;RSQ=0.9570;ERATE=0.0005;THETA=0.0009;AC=2077;AN=2184 GT:DS:GL:BD 0.95100731 1
1 16808703 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.711;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5118;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16808708 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.684;LDAF=0.0040;AVGPOST=0.9963;RSQ=0.5933;ERATE=0.0006;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16808855 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.760;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4724;ERATE=0.0004;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16808908 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.725;LDAF=0.0029;AVGPOST=0.9968;RSQ=0.6323;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16808971 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.987;LDAF=0.1963;AVGPOST=0.9848;RSQ=0.9648;ERATE=0.0007;THETA=0.0006;AC=422;AN=2184 GT:DS:GL:BD 0.19322345 0
1 16808997 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0465;AVGPOST=0.9968;RSQ=0.9732;ERATE=0.0005;THETA=0.0018;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 16809006 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.717;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5729;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16809085 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.729;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5677;ERATE=0.0004;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16809099 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4632;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16809124 rs113099533 GCAAAA G 38918 PASS INDEL;BAVGPOST=0.974;BRSQ=0.959;LDAF=0.5908;AVGPOST=0.9513;RSQ=0.9368;ERATE=0.0065;THETA=0.0006;AC=1311;AN=2184 GT:DS:GL:BD 0.60027474 1
1 16809129 rs113099533 AC A 17587 PASS INDEL;BAVGPOST=0.999;BRSQ=0.493;LDAF=0.9983;AVGPOST=0.9972;RSQ=0.3015;ERATE=0.0007;THETA=0.0005;AC=2183;AN=2184 GT:DS:GL:BD 0.99954212 1
1 16809158 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7089;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16809176 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.705;LDAF=0.0027;AVGPOST=0.9970;RSQ=0.6109;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16809181 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5778;ERATE=0.0003;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16809263 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.679;LDAF=0.0035;AVGPOST=0.9962;RSQ=0.5866;ERATE=0.0004;THETA=0.0020;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16809529 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.951;BRSQ=0.539;LDAF=0.0647;AVGPOST=0.9365;RSQ=0.5758;ERATE=0.0151;THETA=0.0006;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 16809610 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.786;LDAF=0.0146;AVGPOST=0.9945;RSQ=0.8529;ERATE=0.0004;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 16809704 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.552;LDAF=0.0085;AVGPOST=0.9894;RSQ=0.5425;ERATE=0.0020;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16809723 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.747;LDAF=0.0055;AVGPOST=0.9966;RSQ=0.7575;ERATE=0.0011;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16809756 . A AC 86 PASS INDEL;BAVGPOST=0.990;BRSQ=0.078;LDAF=0.0414;AVGPOST=0.9374;RSQ=0.3986;ERATE=0.0031;THETA=0.0019;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 16809796 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.772;LDAF=0.0324;AVGPOST=0.9756;RSQ=0.6969;ERATE=0.0080;THETA=0.0029;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 16809834 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0239;AVGPOST=0.9969;RSQ=0.9530;ERATE=0.0004;THETA=0.0040;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 16809863 MERGED_DEL_2_1933 TTGTCCCGCAGGCGCTGCAGCTGTTCCTCTAGGGCCCGCCGCTCACTCTCGCTGTCGCTAAGCTGCTTCCGCAGGGTGCCCAGCAGGTCCTGGCTTGCCTCATAGCGCCCACGCATGTCCTGGGGCGCGGGGATCACAGAGTCTAGCGGGGGTCCTTTGAGGCCTCCAGAGCCCACCTACTCTCTTCTGG T . . SV;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0461;AVGPOST=0.9972;RSQ=0.9766;ERATE=0.0004;THETA=0.0056;CIEND=-45,108;CIPOS=-74,83;END=16811594;HOMLEN=2;HOMSEQ=TG;SOURCE=AssembledBreakpoints_16809863_1 GT:DS:GL:BD 0.04532967 0
1 16809946 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.595;LDAF=0.0266;AVGPOST=0.9755;RSQ=0.6364;ERATE=0.0046;THETA=0.0033;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 16809984 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.744;LDAF=0.0021;AVGPOST=0.9983;RSQ=0.6895;ERATE=0.0004;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16810033 . GC G 905 PASS INDEL;BAVGPOST=0.986;BRSQ=0.679;LDAF=0.0290;AVGPOST=0.9739;RSQ=0.6244;ERATE=0.0044;THETA=0.0005;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 16810076 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0312;AVGPOST=0.9943;RSQ=0.9225;ERATE=0.0006;THETA=0.0015;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 16810105 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.478;LDAF=0.0138;AVGPOST=0.9835;RSQ=0.5319;ERATE=0.0010;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 16810148 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.573;LDAF=0.0027;AVGPOST=0.9956;RSQ=0.3422;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16810203 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0094;AVGPOST=0.9970;RSQ=0.8570;ERATE=0.0004;THETA=0.0008;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 16810255 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.878;BRSQ=0.510;LDAF=0.8626;AVGPOST=0.8751;RSQ=0.5853;ERATE=0.0072;THETA=0.0032;AC=1986;AN=2184 GT:DS:GL:BD 0.90934068 1
1 16810272 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.757;BRSQ=0.621;LDAF=0.3980;AVGPOST=0.8180;RSQ=0.7766;ERATE=0.0076;THETA=0.0005;AC=920;AN=2184 GT:DS:GL:BD 0.42124543 0
1 16810276 . A AC 430 PASS INDEL;BAVGPOST=0.988;BRSQ=0.558;LDAF=0.0392;AVGPOST=0.9571;RSQ=0.5247;ERATE=0.0016;THETA=0.0022;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 16810290 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.679;BRSQ=0.469;LDAF=0.3471;AVGPOST=0.7755;RSQ=0.6872;ERATE=0.0062;THETA=0.0014;AC=792;AN=2184 GT:DS:GL:BD 0.36263737 0
1 16810301 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.756;BRSQ=0.617;LDAF=0.4116;AVGPOST=0.7946;RSQ=0.7348;ERATE=0.0117;THETA=0.0006;AC=952;AN=2184 GT:DS:GL:BD 0.43589744 0
1 16810323 . TCA T 198 PASS INDEL;BAVGPOST=0.996;BRSQ=0.301;LDAF=0.0112;AVGPOST=0.9803;RSQ=0.2984;ERATE=0.0017;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16810326 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.473;LDAF=0.0452;AVGPOST=0.9590;RSQ=0.6330;ERATE=0.0035;THETA=0.0004;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 16810482 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.635;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4206;ERATE=0.0004;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16810710 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.619;LDAF=0.0030;AVGPOST=0.9968;RSQ=0.5854;ERATE=0.0005;THETA=0.0019;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16810804 rs35392788 GGGCCTCGGCGGGGTGAAC G 16068 PASS INDEL;BAVGPOST=0.828;BRSQ=0.726;LDAF=0.5758;AVGPOST=0.8929;RSQ=0.8557;ERATE=0.0076;THETA=0.0044;AC=1267;AN=2184 GT:DS:GL:BD 0.58012819 1
1 16810820 . A AGG 228 PASS INDEL;BAVGPOST=0.789;BRSQ=0.075;LDAF=0.1997;AVGPOST=0.7098;RSQ=0.2605;ERATE=0.0191;THETA=0.0004;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 16810892 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.676;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5922;ERATE=0.0006;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16810916 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.899;LDAF=0.0085;AVGPOST=0.9959;RSQ=0.8066;ERATE=0.0004;THETA=0.0008;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 16810926 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4759;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16810980 . CAGA C 57 PASS INDEL;BAVGPOST=0.990;BRSQ=0.272;LDAF=0.0365;AVGPOST=0.9371;RSQ=0.2785;ERATE=0.0052;THETA=0.0012;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 16811030 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0068;AVGPOST=0.9962;RSQ=0.8034;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16811041 . TG T 545 PASS INDEL;BAVGPOST=0.994;BRSQ=0.766;LDAF=0.0151;AVGPOST=0.9948;RSQ=0.8643;ERATE=0.0008;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 16811071 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1903;AVGPOST=0.9975;RSQ=0.9935;ERATE=0.0005;THETA=0.0004;AC=416;AN=2184 GT:DS:GL:BD 0.19047619 0
1 16811080 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5441;ERATE=0.0009;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16811221 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.711;LDAF=0.0037;AVGPOST=0.9966;RSQ=0.6338;ERATE=0.0004;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16811392 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7607;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16811414 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.636;LDAF=0.0028;AVGPOST=0.9973;RSQ=0.6752;ERATE=0.0003;THETA=0.0018;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16811479 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0028;AVGPOST=0.9981;RSQ=0.7066;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16811483 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6141;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16811524 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0065;AVGPOST=0.9970;RSQ=0.8309;ERATE=0.0004;THETA=0.0020;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 16811527 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0058;AVGPOST=0.9982;RSQ=0.8781;ERATE=0.0004;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 16811613 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.848;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8877;ERATE=0.0003;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16811628 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0125;AVGPOST=0.9977;RSQ=0.9244;ERATE=0.0004;THETA=0.0012;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 16811782 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4802;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16811876 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.629;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5301;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16811958 . TG T 69 PASS INDEL;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0120;AVGPOST=0.9817;RSQ=0.3731;ERATE=0.0012;THETA=0.0014;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 16812001 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0127;AVGPOST=0.9968;RSQ=0.9065;ERATE=0.0005;THETA=0.0045;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 16812082 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.978;LDAF=0.1923;AVGPOST=0.9880;RSQ=0.9731;ERATE=0.0029;THETA=0.0008;AC=416;AN=2184 GT:DS:GL:BD 0.19047619 0
1 16812402 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.9727;AVGPOST=0.9988;RSQ=0.9819;ERATE=0.0003;THETA=0.0006;AC=2125;AN=2184 GT:DS:GL:BD 0.97298533 1
1 16812458 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0096;AVGPOST=0.9990;RSQ=0.9593;ERATE=0.0003;THETA=0.0026;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 16812629 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.816;LDAF=0.0029;AVGPOST=0.9988;RSQ=0.8413;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16812657 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0046;AVGPOST=0.9986;RSQ=0.8906;ERATE=0.0004;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16812784 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7121;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16812796 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0200;AVGPOST=0.9993;RSQ=0.9870;ERATE=0.0003;THETA=0.0012;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 16812846 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5027;ERATE=0.0005;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16812964 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.661;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7417;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16813013 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16813066 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.963;LDAF=0.1973;AVGPOST=0.9866;RSQ=0.9696;ERATE=0.0016;THETA=0.0005;AC=433;AN=2184 GT:DS:GL:BD 0.19826007 0
1 16813220 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0275;AVGPOST=0.9987;RSQ=0.9806;ERATE=0.0003;THETA=0.0024;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 16813279 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.612;LDAF=0.0023;AVGPOST=0.9973;RSQ=0.5725;ERATE=0.0004;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16813310 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.773;LDAF=0.0019;AVGPOST=0.9970;RSQ=0.3829;ERATE=0.0007;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16813372 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0458;AVGPOST=0.9980;RSQ=0.9815;ERATE=0.0004;THETA=0.0004;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 16813505 . C CA 207 PASS INDEL;BAVGPOST=0.952;BRSQ=0.192;LDAF=0.0711;AVGPOST=0.8939;RSQ=0.3727;ERATE=0.0089;THETA=0.0006;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 16813533 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.711;LDAF=0.0084;AVGPOST=0.9954;RSQ=0.7836;ERATE=0.0008;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 16813559 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8216;ERATE=0.0004;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16813601 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0021;AVGPOST=0.9989;RSQ=0.7832;ERATE=0.0003;THETA=0.0015;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16813628 . CTAAT C 31 PASS INDEL;BAVGPOST=1.000;BRSQ=0.696;LDAF=0.0091;AVGPOST=0.9938;RSQ=0.7260;ERATE=0.0005;THETA=0.0015;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 16813667 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7416;ERATE=0.0005;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16813683 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5735;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16813730 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.595;LDAF=0.0035;AVGPOST=0.9972;RSQ=0.6686;ERATE=0.0007;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16813790 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.973;LDAF=0.0338;AVGPOST=0.9975;RSQ=0.9740;ERATE=0.0004;THETA=0.0040;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 16813978 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.710;LDAF=0.0019;AVGPOST=0.9977;RSQ=0.5364;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16814119 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0029;AVGPOST=0.9986;RSQ=0.8008;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16814120 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0180;AVGPOST=0.9947;RSQ=0.8840;ERATE=0.0007;THETA=0.0010;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 16814451 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.983;LDAF=0.5777;AVGPOST=0.9864;RSQ=0.9831;ERATE=0.0005;THETA=0.0007;AC=1270;AN=2184 GT:DS:GL:BD 0.58150184 1
1 16814629 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.625;LDAF=0.0043;AVGPOST=0.9971;RSQ=0.7229;ERATE=0.0004;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16814702 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.812;LDAF=0.0034;AVGPOST=0.9989;RSQ=0.8584;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16814813 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.970;LDAF=0.0271;AVGPOST=0.9959;RSQ=0.9445;ERATE=0.0005;THETA=0.0008;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 16814945 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8072;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16814994 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.9495;AVGPOST=0.9973;RSQ=0.9792;ERATE=0.0003;THETA=0.0006;AC=2075;AN=2184 GT:DS:GL:BD 0.95009160 1
1 16815053 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5771;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16815123 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0058;AVGPOST=0.9976;RSQ=0.8517;ERATE=0.0004;THETA=0.0010;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 16815212 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.952;LDAF=0.5471;AVGPOST=0.9752;RSQ=0.9695;ERATE=0.0012;THETA=0.0013;AC=1198;AN=2184 GT:DS:GL:BD 0.54853481 1
1 16815328 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16815395 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0272;AVGPOST=0.9993;RSQ=0.9876;ERATE=0.0004;THETA=0.0005;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 16815528 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6913;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16815625 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0058;AVGPOST=0.9994;RSQ=0.9686;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 16815647 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0464;AVGPOST=0.9977;RSQ=0.9815;ERATE=0.0003;THETA=0.0006;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 16815814 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9239;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16815861 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16815862 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16815868 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16815958 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16816048 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0065;AVGPOST=0.9999;RSQ=0.9898;ERATE=0.0003;THETA=0.0008;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 16816075 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0028;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16816089 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9408;ERATE=0.0005;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16816096 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0088;AVGPOST=0.9992;RSQ=0.9618;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 16816190 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0164;AVGPOST=0.9991;RSQ=0.9805;ERATE=0.0003;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 16816278 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16816303 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0249;AVGPOST=0.9996;RSQ=0.9937;ERATE=0.0003;THETA=0.0023;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 16816309 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16816380 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0101;AVGPOST=0.9975;RSQ=0.8994;ERATE=0.0003;THETA=0.0042;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 16816508 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.791;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7640;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16816710 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.834;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.7804;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16816834 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.983;LDAF=0.5760;AVGPOST=0.9787;RSQ=0.9730;ERATE=0.0027;THETA=0.0009;AC=1262;AN=2184 GT:DS:GL:BD 0.57783884 1
1 16816925 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6151;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16816938 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0041;AVGPOST=0.9987;RSQ=0.8666;ERATE=0.0020;THETA=0.0026;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16816982 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.923;LDAF=0.0348;AVGPOST=0.9922;RSQ=0.9143;ERATE=0.0024;THETA=0.0019;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 16816988 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5857;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16817050 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.864;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9103;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16817070 . C CT 82 PASS INDEL;BAVGPOST=0.992;BRSQ=0.174;LDAF=0.0164;AVGPOST=0.9741;RSQ=0.3977;ERATE=0.0012;THETA=0.0059;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 16817131 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.913;BRSQ=0.803;LDAF=0.2109;AVGPOST=0.9324;RSQ=0.8557;ERATE=0.0113;THETA=0.0035;AC=430;AN=2184 GT:DS:GL:BD 0.19688645 0
1 16817143 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.921;LDAF=0.0846;AVGPOST=0.9836;RSQ=0.9303;ERATE=0.0041;THETA=0.0006;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 16817177 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0019;AVGPOST=0.9996;RSQ=0.8978;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16817307 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6151;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16817310 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.970;LDAF=0.6515;AVGPOST=0.9912;RSQ=0.9875;ERATE=0.0009;THETA=0.0020;AC=1423;AN=2184 GT:DS:GL:BD 0.65155679 1
1 16817350 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.789;LDAF=0.0042;AVGPOST=0.9984;RSQ=0.8443;ERATE=0.0004;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16817376 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0268;AVGPOST=0.9995;RSQ=0.9930;ERATE=0.0003;THETA=0.0006;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 16817418 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.975;LDAF=0.0118;AVGPOST=0.9983;RSQ=0.9498;ERATE=0.0003;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 16817454 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0003;THETA=0.0150;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16817503 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0093;AVGPOST=0.9986;RSQ=0.9386;ERATE=0.0004;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 16817532 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.553;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.4070;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16817622 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6639;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16817677 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.977;LDAF=0.5356;AVGPOST=0.9839;RSQ=0.9807;ERATE=0.0007;THETA=0.0006;AC=1173;AN=2184 GT:DS:GL:BD 0.53708792 1
1 16818030 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9980;RSQ=0.8860;ERATE=0.0004;THETA=0.0026;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 16818163 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0020;AVGPOST=0.9985;RSQ=0.7058;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16818188 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5951;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16818195 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.862;LDAF=0.0462;AVGPOST=0.9867;RSQ=0.8882;ERATE=0.0009;THETA=0.0009;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 16818225 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.879;LDAF=0.9211;AVGPOST=0.9787;RSQ=0.8938;ERATE=0.0015;THETA=0.0009;AC=2017;AN=2184 GT:DS:GL:BD 0.92353481 1
1 16818324 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.722;LDAF=0.0130;AVGPOST=0.9941;RSQ=0.8227;ERATE=0.0005;THETA=0.0078;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 16818447 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.688;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4100;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16818611 . TG T 68 PASS INDEL;BAVGPOST=0.999;BRSQ=0.719;LDAF=0.0040;AVGPOST=0.9963;RSQ=0.6358;ERATE=0.0005;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16818763 . CA C 1020 PASS INDEL;BAVGPOST=0.997;BRSQ=0.943;LDAF=0.0229;AVGPOST=0.9814;RSQ=0.6996;ERATE=0.0008;THETA=0.0006;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 16819090 rs36084231 TC T 32287 PASS INDEL;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.1785;AVGPOST=0.9932;RSQ=0.9840;ERATE=0.0004;THETA=0.0019;AC=389;AN=2184 GT:DS:GL:BD 0.17811355 0
1 16819122 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0064;AVGPOST=0.9996;RSQ=0.9703;ERATE=0.0003;THETA=0.0023;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 16819299 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.689;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16819356 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.4834;ERATE=0.0007;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16819380 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.870;LDAF=0.0109;AVGPOST=0.9933;RSQ=0.7413;ERATE=0.0013;THETA=0.0013;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 16819550 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0272;AVGPOST=0.9993;RSQ=0.9883;ERATE=0.0004;THETA=0.0006;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 16819551 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.773;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5808;ERATE=0.0004;THETA=0.0048;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16819659 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5545;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16819829 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.622;LDAF=0.0374;AVGPOST=0.9774;RSQ=0.7793;ERATE=0.0008;THETA=0.0007;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 16819988 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.724;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5351;ERATE=0.0004;THETA=0.0077;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16820268 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.985;LDAF=0.5685;AVGPOST=0.9859;RSQ=0.9816;ERATE=0.0021;THETA=0.0004;AC=1239;AN=2184 GT:DS:GL:BD 0.56730771 1
1 16820299 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.539;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6428;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16820469 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.942;LDAF=0.0539;AVGPOST=0.9917;RSQ=0.9395;ERATE=0.0007;THETA=0.0004;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 16820526 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0269;AVGPOST=0.9980;RSQ=0.9718;ERATE=0.0005;THETA=0.0064;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 16820635 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6752;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16820646 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0263;AVGPOST=0.9996;RSQ=0.9933;ERATE=0.0003;THETA=0.0006;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 16820666 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0104;AVGPOST=0.9988;RSQ=0.9431;ERATE=0.0005;THETA=0.0007;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 16820701 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.677;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5045;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16820707 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.964;LDAF=0.2173;AVGPOST=0.9832;RSQ=0.9673;ERATE=0.0006;THETA=0.0007;AC=472;AN=2184 GT:DS:GL:BD 0.21611722 0
1 16820798 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.810;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8508;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16820846 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.668;LDAF=0.0066;AVGPOST=0.9946;RSQ=0.6453;ERATE=0.0008;THETA=0.0010;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16820998 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.946;LDAF=0.0344;AVGPOST=0.9951;RSQ=0.9422;ERATE=0.0005;THETA=0.0006;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 16821143 . GC G 346 PASS INDEL;BAVGPOST=0.975;BRSQ=0.566;LDAF=0.0395;AVGPOST=0.9726;RSQ=0.7346;ERATE=0.0030;THETA=0.0005;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 16821164 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.754;LDAF=0.0247;AVGPOST=0.9922;RSQ=0.8746;ERATE=0.0004;THETA=0.0010;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 16821174 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.6917;ERATE=0.0005;THETA=0.0017;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16821365 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.969;LDAF=0.7892;AVGPOST=0.9912;RSQ=0.9832;ERATE=0.0004;THETA=0.0016;AC=1719;AN=2184 GT:DS:GL:BD 0.78708792 1
1 16821395 . A AT 173 PASS INDEL;BAVGPOST=0.995;BRSQ=0.341;LDAF=0.0077;AVGPOST=0.9897;RSQ=0.4244;ERATE=0.0010;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16821554 . AT A 188 PASS INDEL;BAVGPOST=0.955;BRSQ=0.472;LDAF=0.0497;AVGPOST=0.9619;RSQ=0.6960;ERATE=0.0048;THETA=0.0006;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 16822220 . TA T 338 PASS INDEL;BAVGPOST=0.910;BRSQ=0.094;LDAF=0.0478;AVGPOST=0.9319;RSQ=0.3998;ERATE=0.0026;THETA=0.0027;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 16822459 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0274;AVGPOST=0.9981;RSQ=0.9708;ERATE=0.0005;THETA=0.0009;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 16822466 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5214;ERATE=0.0003;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16822719 . TTTTG T 214 PASS INDEL;BAVGPOST=0.998;BRSQ=0.428;LDAF=0.0053;AVGPOST=0.9935;RSQ=0.5248;ERATE=0.0008;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16822727 . G GT 13 PASS INDEL;BAVGPOST=0.998;BRSQ=0.456;LDAF=0.0062;AVGPOST=0.9910;RSQ=0.4192;ERATE=0.0010;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16822899 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.962;BRSQ=0.556;LDAF=0.0492;AVGPOST=0.9745;RSQ=0.8076;ERATE=0.0007;THETA=0.0010;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 16823026 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.425;LDAF=0.0211;AVGPOST=0.9754;RSQ=0.5629;ERATE=0.0016;THETA=0.0006;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 16823068 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.761;LDAF=0.0623;AVGPOST=0.9790;RSQ=0.8671;ERATE=0.0010;THETA=0.0002;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 16823156 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.592;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.7908;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16823164 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.925;LDAF=0.0142;AVGPOST=0.9958;RSQ=0.8915;ERATE=0.0008;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 16823334 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5817;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16823370 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16823535 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.909;LDAF=0.0585;AVGPOST=0.9925;RSQ=0.9463;ERATE=0.0009;THETA=0.0007;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 16823571 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5291;ERATE=0.0004;THETA=0.0072;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16823572 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.936;LDAF=0.0596;AVGPOST=0.9911;RSQ=0.9355;ERATE=0.0013;THETA=0.0066;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 16823633 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5703;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16823639 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.659;LDAF=0.0021;AVGPOST=0.9981;RSQ=0.6474;ERATE=0.0005;THETA=0.0065;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16823699 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.980;LDAF=0.2057;AVGPOST=0.9890;RSQ=0.9780;ERATE=0.0006;THETA=0.0016;AC=450;AN=2184 GT:DS:GL:BD 0.20604396 0
1 16823704 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.702;LDAF=0.0055;AVGPOST=0.9967;RSQ=0.7590;ERATE=0.0004;THETA=0.0032;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16823755 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.630;LDAF=0.0029;AVGPOST=0.9979;RSQ=0.6735;ERATE=0.0008;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16823994 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.812;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8257;ERATE=0.0003;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16824010 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.758;LDAF=0.0224;AVGPOST=0.9828;RSQ=0.7039;ERATE=0.0046;THETA=0.0018;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 16824114 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16824216 rs58072307 CT C 1907 PASS INDEL;BAVGPOST=0.934;BRSQ=0.509;LDAF=0.1203;AVGPOST=0.8604;RSQ=0.4620;ERATE=0.0179;THETA=0.0005;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 16824290 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.506;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4530;ERATE=0.0006;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16824337 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.979;LDAF=0.3094;AVGPOST=0.9876;RSQ=0.9816;ERATE=0.0008;THETA=0.0004;AC=671;AN=2184 GT:DS:GL:BD 0.30723444 0
1 16824381 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.947;LDAF=0.5975;AVGPOST=0.9862;RSQ=0.9820;ERATE=0.0007;THETA=0.0027;AC=1304;AN=2184 GT:DS:GL:BD 0.59706962 1
1 16824412 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16824436 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.983;LDAF=0.0974;AVGPOST=0.9968;RSQ=0.9879;ERATE=0.0004;THETA=0.0006;AC=212;AN=2184 GT:DS:GL:BD 0.09706960 0
1 16824467 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.902;LDAF=0.9218;AVGPOST=0.9903;RSQ=0.9515;ERATE=0.0008;THETA=0.0006;AC=2020;AN=2184 GT:DS:GL:BD 0.92490840 1
1 16824531 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.785;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6589;ERATE=0.0004;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16824713 . C CT 48 PASS INDEL;BAVGPOST=0.988;BRSQ=0.184;LDAF=0.0041;AVGPOST=0.9947;RSQ=0.4610;ERATE=0.0010;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16824861 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.583;LDAF=0.0053;AVGPOST=0.9964;RSQ=0.7724;ERATE=0.0006;THETA=0.0024;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16824875 rs34781046 ATC A 21201 PASS INDEL;BAVGPOST=0.986;BRSQ=0.981;LDAF=0.3064;AVGPOST=0.9839;RSQ=0.9781;ERATE=0.0007;THETA=0.0015;AC=667;AN=2184 GT:DS:GL:BD 0.30540293 0
1 16824960 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.964;BRSQ=0.713;LDAF=0.0781;AVGPOST=0.9459;RSQ=0.7014;ERATE=0.0087;THETA=0.0011;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 16824990 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0122;AVGPOST=0.9975;RSQ=0.9113;ERATE=0.0004;THETA=0.0026;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 16825008 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.574;LDAF=0.0317;AVGPOST=0.9596;RSQ=0.4975;ERATE=0.0067;THETA=0.0010;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 16825045 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.635;LDAF=0.0081;AVGPOST=0.9942;RSQ=0.6950;ERATE=0.0008;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 16825199 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.651;LDAF=0.0098;AVGPOST=0.9955;RSQ=0.8249;ERATE=0.0004;THETA=0.0054;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 16825315 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.622;LDAF=0.0088;AVGPOST=0.9969;RSQ=0.8528;ERATE=0.0006;THETA=0.0008;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 16825488 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.938;BRSQ=0.683;LDAF=0.8687;AVGPOST=0.9031;RSQ=0.6698;ERATE=0.0040;THETA=0.0005;AC=1960;AN=2184 GT:DS:GL:BD 0.89743590 1
1 16825607 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.949;BRSQ=0.913;LDAF=0.3228;AVGPOST=0.9579;RSQ=0.9373;ERATE=0.0025;THETA=0.0004;AC=689;AN=2184 GT:DS:GL:BD 0.31547618 0
1 16825632 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.950;BRSQ=0.911;LDAF=0.3314;AVGPOST=0.9196;RSQ=0.8840;ERATE=0.0051;THETA=0.0005;AC=698;AN=2184 GT:DS:GL:BD 0.31959707 0
1 16825635 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.117;LDAF=0.0377;AVGPOST=0.9453;RSQ=0.3864;ERATE=0.0033;THETA=0.0007;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 16825956 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.953;LDAF=0.0293;AVGPOST=0.9965;RSQ=0.9523;ERATE=0.0006;THETA=0.0005;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 16826019 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.921;LDAF=0.0145;AVGPOST=0.9963;RSQ=0.8965;ERATE=0.0004;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 16826135 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.976;LDAF=0.0341;AVGPOST=0.9964;RSQ=0.9609;ERATE=0.0003;THETA=0.0006;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 16826185 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.708;LDAF=0.0104;AVGPOST=0.9953;RSQ=0.8104;ERATE=0.0006;THETA=0.0007;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 16826249 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0097;AVGPOST=0.9997;RSQ=0.9840;ERATE=0.0003;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 16826296 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.974;LDAF=0.1935;AVGPOST=0.9795;RSQ=0.9555;ERATE=0.0027;THETA=0.0004;AC=414;AN=2184 GT:DS:GL:BD 0.18956044 0
1 16826325 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.798;LDAF=0.0023;AVGPOST=0.9984;RSQ=0.7448;ERATE=0.0005;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16826353 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6409;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16826421 . T TC 217 PASS INDEL;BAVGPOST=0.996;BRSQ=0.738;LDAF=0.0187;AVGPOST=0.9870;RSQ=0.7201;ERATE=0.0010;THETA=0.0008;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 16826831 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.658;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.3496;ERATE=0.0006;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16826919 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0197;AVGPOST=0.9990;RSQ=0.9795;ERATE=0.0003;THETA=0.0008;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 16826933 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.658;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0005;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16826991 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.701;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.3832;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16826994 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.753;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7061;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16827104 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0270;AVGPOST=0.9989;RSQ=0.9827;ERATE=0.0005;THETA=0.0004;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 16827116 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0195;AVGPOST=0.9993;RSQ=0.9847;ERATE=0.0003;THETA=0.0003;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 16827202 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.729;LDAF=0.0437;AVGPOST=0.9733;RSQ=0.7609;ERATE=0.0032;THETA=0.0008;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 16827277 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5876;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16827280 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.667;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6814;ERATE=0.0003;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16827342 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0169;AVGPOST=0.9986;RSQ=0.9612;ERATE=0.0004;THETA=0.0023;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 16827705 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4626;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16827791 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0451;AVGPOST=0.9970;RSQ=0.9762;ERATE=0.0003;THETA=0.0005;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 16827804 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0032;AVGPOST=0.9984;RSQ=0.7918;ERATE=0.0003;THETA=0.0020;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16827882 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.842;LDAF=0.0406;AVGPOST=0.9876;RSQ=0.8824;ERATE=0.0006;THETA=0.0008;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 16827929 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0105;AVGPOST=0.9991;RSQ=0.9649;ERATE=0.0003;THETA=0.0007;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 16828019 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.849;LDAF=0.9495;AVGPOST=0.9933;RSQ=0.9456;ERATE=0.0009;THETA=0.0006;AC=2079;AN=2184 GT:DS:GL:BD 0.95192307 1
1 16828085 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0103;AVGPOST=0.9979;RSQ=0.9174;ERATE=0.0003;THETA=0.0010;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 16828126 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.561;LDAF=0.0032;AVGPOST=0.9955;RSQ=0.4294;ERATE=0.0007;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16828139 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.777;LDAF=0.0024;AVGPOST=0.9978;RSQ=0.5762;ERATE=0.0006;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16828164 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.527;LDAF=0.0332;AVGPOST=0.9666;RSQ=0.6102;ERATE=0.0046;THETA=0.0026;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 16828171 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0175;AVGPOST=0.9973;RSQ=0.9304;ERATE=0.0005;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 16828222 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.902;LDAF=0.9480;AVGPOST=0.9957;RSQ=0.9660;ERATE=0.0006;THETA=0.0007;AC=2073;AN=2184 GT:DS:GL:BD 0.94917583 1
1 16828268 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16828307 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.7176;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16828338 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.910;LDAF=0.0141;AVGPOST=0.9979;RSQ=0.9401;ERATE=0.0005;THETA=0.0014;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 16828349 . T TG 251 PASS INDEL;BAVGPOST=0.998;BRSQ=0.804;LDAF=0.0068;AVGPOST=0.9942;RSQ=0.6354;ERATE=0.0007;THETA=0.0021;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16828389 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0056;AVGPOST=0.9964;RSQ=0.7653;ERATE=0.0005;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16828400 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5270;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16828431 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5972;ERATE=0.0003;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16828502 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.990;LDAF=0.5303;AVGPOST=0.9892;RSQ=0.9877;ERATE=0.0006;THETA=0.0036;AC=1155;AN=2184 GT:DS:GL:BD 0.52884614 1
1 16828614 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9528;AVGPOST=0.9996;RSQ=0.9964;ERATE=0.0003;THETA=0.0039;AC=2081;AN=2184 GT:DS:GL:BD 0.95283884 1
1 16828640 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5921;AVGPOST=0.9964;RSQ=0.9950;ERATE=0.0005;THETA=0.0114;AC=1293;AN=2184 GT:DS:GL:BD 0.59203297 1
1 16828657 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9523;AVGPOST=0.9985;RSQ=0.9861;ERATE=0.0005;THETA=0.0004;AC=2081;AN=2184 GT:DS:GL:BD 0.95283884 1
1 16828707 . A AT 270 PASS INDEL;BAVGPOST=0.996;BRSQ=0.826;LDAF=0.0125;AVGPOST=0.9875;RSQ=0.5869;ERATE=0.0006;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16828730 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.364;LDAF=0.0173;AVGPOST=0.9770;RSQ=0.4632;ERATE=0.0031;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 16828770 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.486;LDAF=0.0079;AVGPOST=0.9920;RSQ=0.6132;ERATE=0.0012;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16828961 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0285;AVGPOST=0.9977;RSQ=0.9668;ERATE=0.0006;THETA=0.0010;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 16828968 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0277;AVGPOST=0.9984;RSQ=0.9763;ERATE=0.0004;THETA=0.0017;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 16829000 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7778;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16829030 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.478;LDAF=0.0131;AVGPOST=0.9832;RSQ=0.4806;ERATE=0.0031;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 16829117 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16829165 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.762;LDAF=0.0142;AVGPOST=0.9930;RSQ=0.7964;ERATE=0.0023;THETA=0.0017;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 16829294 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.644;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.3407;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16829305 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.9412;AVGPOST=0.9794;RSQ=0.8583;ERATE=0.0022;THETA=0.0008;AC=2072;AN=2184 GT:DS:GL:BD 0.94871795 1
1 16829444 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.959;BRSQ=0.924;LDAF=0.3051;AVGPOST=0.9512;RSQ=0.9292;ERATE=0.0032;THETA=0.0008;AC=681;AN=2184 GT:DS:GL:BD 0.31181318 0
1 16829505 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6180;ERATE=0.0004;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16829571 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6343;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16829621 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.748;LDAF=0.0048;AVGPOST=0.9976;RSQ=0.7917;ERATE=0.0004;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16829639 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0098;AVGPOST=0.9984;RSQ=0.9316;ERATE=0.0005;THETA=0.0008;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 16829640 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0073;AVGPOST=0.9981;RSQ=0.8874;ERATE=0.0004;THETA=0.0015;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 16829713 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.739;LDAF=0.0026;AVGPOST=0.9975;RSQ=0.5728;ERATE=0.0006;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16829793 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.876;LDAF=0.0714;AVGPOST=0.9718;RSQ=0.8506;ERATE=0.0040;THETA=0.0016;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 16829870 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.834;LDAF=0.9218;AVGPOST=0.9733;RSQ=0.8662;ERATE=0.0010;THETA=0.0003;AC=2022;AN=2184 GT:DS:GL:BD 0.92582417 1
1 16829924 . GC G 13 PASS INDEL;BAVGPOST=0.998;BRSQ=0.354;LDAF=0.0020;AVGPOST=0.9973;RSQ=0.3843;ERATE=0.0009;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16829957 . C CT 840 PASS INDEL;BAVGPOST=0.932;BRSQ=0.512;LDAF=0.1152;AVGPOST=0.8700;RSQ=0.4509;ERATE=0.0330;THETA=0.0017;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 16830026 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.953;BRSQ=0.914;LDAF=0.4089;AVGPOST=0.9319;RSQ=0.8980;ERATE=0.0370;THETA=0.0006;AC=865;AN=2184 GT:DS:GL:BD 0.39606228 0
1 16830083 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.834;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0003;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16830374 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7270;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16830449 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8606;ERATE=0.0005;THETA=0.0016;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16830508 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.9539;AVGPOST=0.9961;RSQ=0.9645;ERATE=0.0006;THETA=0.0045;AC=2085;AN=2184 GT:DS:GL:BD 0.95467031 1
1 16830751 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.892;LDAF=0.0142;AVGPOST=0.9984;RSQ=0.9566;ERATE=0.0003;THETA=0.0022;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 16830792 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.952;BRSQ=0.666;LDAF=0.0941;AVGPOST=0.9265;RSQ=0.6534;ERATE=0.0194;THETA=0.0003;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 16830833 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5383;AVGPOST=0.9971;RSQ=0.9962;ERATE=0.0004;THETA=0.0017;AC=1176;AN=2184 GT:DS:GL:BD 0.53846157 1
1 16830857 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0034;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16831094 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0182;AVGPOST=0.9958;RSQ=0.9063;ERATE=0.0005;THETA=0.0011;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 16831095 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0008;AVGPOST=0.9985;RSQ=0.0637;ERATE=0.0006;THETA=0.0007;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 16831223 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.514;LDAF=0.0083;AVGPOST=0.9881;RSQ=0.3805;ERATE=0.0015;THETA=0.0012;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16831281 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.557;LDAF=0.0046;AVGPOST=0.9952;RSQ=0.5563;ERATE=0.0007;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16831349 . T TA 1143 PASS INDEL;BAVGPOST=0.953;BRSQ=0.484;LDAF=0.0874;AVGPOST=0.8924;RSQ=0.4620;ERATE=0.0146;THETA=0.0007;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 16831357 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.180;LDAF=0.0109;AVGPOST=0.9841;RSQ=0.3884;ERATE=0.0040;THETA=0.0022;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16831368 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.972;LDAF=0.6153;AVGPOST=0.9867;RSQ=0.9818;ERATE=0.0007;THETA=0.0030;AC=1352;AN=2184 GT:DS:GL:BD 0.61904764 1
1 16831394 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0109;AVGPOST=0.9992;RSQ=0.9712;ERATE=0.0003;THETA=0.0016;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 16831541 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.885;BRSQ=0.706;LDAF=0.7308;AVGPOST=0.8267;RSQ=0.6636;ERATE=0.0280;THETA=0.0011;AC=1699;AN=2184 GT:DS:GL:BD 0.77793038 1
1 16831600 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.747;LDAF=0.0006;AVGPOST=0.9989;RSQ=0.2936;ERATE=0.0005;THETA=0.0018;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 16831817 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0360;AVGPOST=0.9984;RSQ=0.9839;ERATE=0.0003;THETA=0.0007;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 16831863 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.976;LDAF=0.1923;AVGPOST=0.9923;RSQ=0.9835;ERATE=0.0015;THETA=0.0008;AC=422;AN=2184 GT:DS:GL:BD 0.19322345 0
1 16831988 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8063;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16832032 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16832133 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0096;AVGPOST=0.9999;RSQ=0.9954;ERATE=0.0003;THETA=0.0007;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 16832224 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.909;LDAF=0.0151;AVGPOST=0.9973;RSQ=0.9272;ERATE=0.0008;THETA=0.0034;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 16832231 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7529;ERATE=0.0003;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16832237 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0093;AVGPOST=0.9996;RSQ=0.9827;ERATE=0.0003;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 16832268 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0169;AVGPOST=0.9986;RSQ=0.9697;ERATE=0.0003;THETA=0.0012;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 16832342 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.866;LDAF=0.0253;AVGPOST=0.9946;RSQ=0.9126;ERATE=0.0011;THETA=0.0002;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 16832351 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0026;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16832446 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.946;LDAF=0.4944;AVGPOST=0.9643;RSQ=0.9551;ERATE=0.0094;THETA=0.0042;AC=1097;AN=2184 GT:DS:GL:BD 0.50228935 1
1 16832521 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0042;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16832869 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0098;AVGPOST=0.9997;RSQ=0.9844;ERATE=0.0003;THETA=0.0042;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 16832973 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0041;AVGPOST=0.9994;RSQ=0.9389;ERATE=0.0003;THETA=0.0049;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16833518 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.913;LDAF=0.8551;AVGPOST=0.9711;RSQ=0.9090;ERATE=0.0065;THETA=0.0042;AC=1865;AN=2184 GT:DS:GL:BD 0.85393775 1
1 16833904 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.929;BRSQ=0.707;LDAF=0.1844;AVGPOST=0.9022;RSQ=0.7020;ERATE=0.0551;THETA=0.0006;AC=341;AN=2184 GT:DS:GL:BD 0.15613553 0
1 16835137 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.920;LDAF=0.0263;AVGPOST=0.9962;RSQ=0.9369;ERATE=0.0006;THETA=0.0004;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 16837245 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.925;LDAF=0.8165;AVGPOST=0.9674;RSQ=0.9137;ERATE=0.0013;THETA=0.0020;AC=1789;AN=2184 GT:DS:GL:BD 0.81913918 1
1 16837770 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.967;LDAF=0.8008;AVGPOST=0.9834;RSQ=0.9650;ERATE=0.0008;THETA=0.0014;AC=1753;AN=2184 GT:DS:GL:BD 0.80265570 1
1 16837774 rs33975988 TA T 4893 PASS INDEL;BAVGPOST=0.879;BRSQ=0.510;LDAF=0.2022;AVGPOST=0.8338;RSQ=0.5191;ERATE=0.0570;THETA=0.0078;AC=281;AN=2184 GT:DS:GL:BD 0.12866300 0
1 16837781 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0261;AVGPOST=0.9981;RSQ=0.9675;ERATE=0.0004;THETA=0.0005;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 16838787 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.665;LDAF=0.0018;AVGPOST=0.9986;RSQ=0.6713;ERATE=0.0006;THETA=0.0020;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16839007 rs57938173 AGT A 11243 PASS INDEL;BAVGPOST=0.709;BRSQ=0.464;LDAF=0.5685;AVGPOST=0.7062;RSQ=0.5071;ERATE=0.0608;THETA=0.0015;AC=1358;AN=2184 GT:DS:GL:BD 0.62179488 1
1 16840173 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0059;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16840490 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0192;AVGPOST=0.9984;RSQ=0.9716;ERATE=0.0003;THETA=0.0026;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 16840730 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.846;BRSQ=0.700;LDAF=0.3516;AVGPOST=0.8562;RSQ=0.7463;ERATE=0.0198;THETA=0.0008;AC=754;AN=2184 GT:DS:GL:BD 0.34523809 0
1 16840757 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0030;AVGPOST=0.9979;RSQ=0.6845;ERATE=0.0008;THETA=0.0031;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16840772 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4881;ERATE=0.0004;THETA=0.0048;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16840786 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.9518;AVGPOST=0.9963;RSQ=0.9706;ERATE=0.0003;THETA=0.0007;AC=2081;AN=2184 GT:DS:GL:BD 0.95283884 1
1 16840941 rs60037931 TC T 2322 PASS INDEL;BAVGPOST=0.912;BRSQ=0.587;LDAF=0.1572;AVGPOST=0.8732;RSQ=0.5830;ERATE=0.0559;THETA=0.0012;AC=231;AN=2184 GT:DS:GL:BD 0.10576923 0
1 16840947 . CGTGGCGAAGCAGCAA C 1378 PASS INDEL;BAVGPOST=0.988;BRSQ=0.614;LDAF=0.0243;AVGPOST=0.9732;RSQ=0.5266;ERATE=0.0039;THETA=0.0023;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 16840955 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.935;BRSQ=0.745;LDAF=0.1556;AVGPOST=0.9409;RSQ=0.8312;ERATE=0.0009;THETA=0.0011;AC=311;AN=2184 GT:DS:GL:BD 0.14239927 0
1 16841100 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.922;BRSQ=0.887;LDAF=0.5250;AVGPOST=0.8913;RSQ=0.8685;ERATE=0.0161;THETA=0.0027;AC=1175;AN=2184 GT:DS:GL:BD 0.53800368 1
1 16841328 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0298;AVGPOST=0.9985;RSQ=0.9773;ERATE=0.0005;THETA=0.0005;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 16841332 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.745;LDAF=0.0033;AVGPOST=0.9972;RSQ=0.6683;ERATE=0.0007;THETA=0.0036;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16841709 . CA C 273 PASS INDEL;BAVGPOST=0.969;BRSQ=0.439;LDAF=0.0444;AVGPOST=0.9539;RSQ=0.5948;ERATE=0.0030;THETA=0.0011;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 16843409 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.708;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7319;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16843412 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.880;LDAF=0.0036;AVGPOST=0.9988;RSQ=0.8584;ERATE=0.0003;THETA=0.0027;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16843464 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.946;LDAF=0.0153;AVGPOST=0.9983;RSQ=0.9515;ERATE=0.0004;THETA=0.0005;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 16843637 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4893;ERATE=0.0005;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16843801 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6612;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16843822 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.816;LDAF=0.0210;AVGPOST=0.9911;RSQ=0.8438;ERATE=0.0009;THETA=0.0006;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 16843895 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0247;AVGPOST=0.9990;RSQ=0.9827;ERATE=0.0004;THETA=0.0014;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 16843936 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0061;AVGPOST=0.9997;RSQ=0.9783;ERATE=0.0003;THETA=0.0031;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 16843984 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0022;AVGPOST=0.9981;RSQ=0.6423;ERATE=0.0007;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16843996 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.750;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6077;ERATE=0.0003;THETA=0.0068;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16844202 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.976;LDAF=0.0245;AVGPOST=0.9988;RSQ=0.9798;ERATE=0.0005;THETA=0.0019;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 16844232 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.755;LDAF=0.0029;AVGPOST=0.9968;RSQ=0.5321;ERATE=0.0007;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16844238 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.754;LDAF=0.0023;AVGPOST=0.9982;RSQ=0.6494;ERATE=0.0005;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16844267 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.802;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6473;ERATE=0.0007;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16844268 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.791;LDAF=0.0208;AVGPOST=0.9898;RSQ=0.8007;ERATE=0.0003;THETA=0.0014;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 16844291 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0244;AVGPOST=0.9992;RSQ=0.9868;ERATE=0.0003;THETA=0.0007;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 16844312 . CCTGA C 1213 PASS INDEL;BAVGPOST=0.998;BRSQ=0.907;LDAF=0.0109;AVGPOST=0.9954;RSQ=0.8264;ERATE=0.0006;THETA=0.0012;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 16844427 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.960;BRSQ=0.734;LDAF=0.9280;AVGPOST=0.9710;RSQ=0.8485;ERATE=0.0010;THETA=0.0008;AC=2037;AN=2184 GT:DS:GL:BD 0.93269229 1
1 16844441 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0283;AVGPOST=0.9968;RSQ=0.9589;ERATE=0.0005;THETA=0.0005;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 16844519 . CACAA C 43 PASS INDEL;BAVGPOST=0.996;BRSQ=0.500;LDAF=0.0132;AVGPOST=0.9791;RSQ=0.3549;ERATE=0.0038;THETA=0.0016;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16844541 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16844545 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0267;AVGPOST=0.9997;RSQ=0.9944;ERATE=0.0003;THETA=0.0020;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 16844817 . T TC 446 PASS INDEL;BAVGPOST=0.988;BRSQ=0.774;LDAF=0.0382;AVGPOST=0.9708;RSQ=0.6648;ERATE=0.0180;THETA=0.0060;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 16844848 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.947;LDAF=0.7874;AVGPOST=0.9883;RSQ=0.9762;ERATE=0.0010;THETA=0.0010;AC=1718;AN=2184 GT:DS:GL:BD 0.78663003 1
1 16844851 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0028;AVGPOST=0.9969;RSQ=0.5827;ERATE=0.0005;THETA=0.0032;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16844968 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16845003 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.878;LDAF=0.0195;AVGPOST=0.9965;RSQ=0.9312;ERATE=0.0009;THETA=0.0007;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 16845226 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.978;LDAF=0.0328;AVGPOST=0.9971;RSQ=0.9612;ERATE=0.0007;THETA=0.0076;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 16845238 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.965;LDAF=0.0292;AVGPOST=0.9923;RSQ=0.9008;ERATE=0.0006;THETA=0.0013;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 16845273 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0100;AVGPOST=0.9982;RSQ=0.9179;ERATE=0.0005;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 16845295 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.463;LDAF=0.0078;AVGPOST=0.9941;RSQ=0.6766;ERATE=0.0007;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 16845303 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.956;BRSQ=0.729;LDAF=0.9204;AVGPOST=0.9415;RSQ=0.6973;ERATE=0.0064;THETA=0.0030;AC=2035;AN=2184 GT:DS:GL:BD 0.93177658 1
1 16845319 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.680;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4199;ERATE=0.0006;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16845368 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.560;LDAF=0.0175;AVGPOST=0.9835;RSQ=0.6262;ERATE=0.0015;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 16845400 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.607;LDAF=0.0286;AVGPOST=0.9667;RSQ=0.5246;ERATE=0.0088;THETA=0.0007;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 16845415 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.854;LDAF=0.0204;AVGPOST=0.9913;RSQ=0.8353;ERATE=0.0007;THETA=0.0010;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 16845417 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.776;LDAF=0.9965;AVGPOST=0.9984;RSQ=0.7794;ERATE=0.0006;THETA=0.0007;AC=2178;AN=2184 GT:DS:GL:BD 0.99725276 1
1 16845540 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.949;BRSQ=0.909;LDAF=0.5470;AVGPOST=0.9319;RSQ=0.8964;ERATE=0.0407;THETA=0.0006;AC=1210;AN=2184 GT:DS:GL:BD 0.55402929 1
1 16845587 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0260;AVGPOST=0.9995;RSQ=0.9911;ERATE=0.0003;THETA=0.0004;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 16845673 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.670;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16845692 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7775;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16845701 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.915;LDAF=0.0101;AVGPOST=0.9985;RSQ=0.9351;ERATE=0.0004;THETA=0.0009;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 16845719 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.1097;AVGPOST=0.9982;RSQ=0.9944;ERATE=0.0005;THETA=0.0004;AC=239;AN=2184 GT:DS:GL:BD 0.10943224 0
1 16845773 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.895;LDAF=0.0295;AVGPOST=0.9926;RSQ=0.9035;ERATE=0.0008;THETA=0.0058;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 16845781 . A AC 1253 PASS INDEL;BAVGPOST=0.984;BRSQ=0.832;LDAF=0.0602;AVGPOST=0.9675;RSQ=0.7485;ERATE=0.0354;THETA=0.0011;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 16845933 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.860;LDAF=0.0629;AVGPOST=0.9783;RSQ=0.8708;ERATE=0.0055;THETA=0.0011;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 16846003 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4450;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16846028 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.864;LDAF=0.0241;AVGPOST=0.9901;RSQ=0.8396;ERATE=0.0011;THETA=0.0021;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 16846035 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.948;LDAF=0.7674;AVGPOST=0.9782;RSQ=0.9622;ERATE=0.0009;THETA=0.0027;AC=1684;AN=2184 GT:DS:GL:BD 0.77106225 1
1 16846052 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.734;LDAF=0.0159;AVGPOST=0.9875;RSQ=0.7018;ERATE=0.0018;THETA=0.0027;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 16846099 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.552;LDAF=0.0019;AVGPOST=0.9973;RSQ=0.3886;ERATE=0.0010;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16846123 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0266;AVGPOST=0.9997;RSQ=0.9944;ERATE=0.0004;THETA=0.0035;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 16846177 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0044;AVGPOST=0.9979;RSQ=0.8114;ERATE=0.0007;THETA=0.0028;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16846246 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16846252 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6241;ERATE=0.0004;THETA=0.0057;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16846281 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0292;AVGPOST=0.9990;RSQ=0.9875;ERATE=0.0004;THETA=0.0016;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 16846492 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0313;AVGPOST=0.9973;RSQ=0.9649;ERATE=0.0005;THETA=0.0004;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 16846497 rs3067674 C CTGG 65648 PASS INDEL;BAVGPOST=0.946;BRSQ=0.924;LDAF=0.5394;AVGPOST=0.9475;RSQ=0.9389;ERATE=0.0047;THETA=0.0009;AC=1191;AN=2184 GT:DS:GL:BD 0.54532969 1
1 16846550 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.944;LDAF=0.0313;AVGPOST=0.9938;RSQ=0.9208;ERATE=0.0015;THETA=0.0011;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 16846611 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6526;ERATE=0.0004;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16846632 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0093;AVGPOST=0.9998;RSQ=0.9881;ERATE=0.0003;THETA=0.0039;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 16846817 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0265;AVGPOST=0.9990;RSQ=0.9845;ERATE=0.0004;THETA=0.0008;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 16846910 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6474;ERATE=0.0005;THETA=0.0047;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16847009 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.697;LDAF=0.0029;AVGPOST=0.9971;RSQ=0.5809;ERATE=0.0007;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16847043 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.4694;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16847085 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0268;AVGPOST=0.9994;RSQ=0.9892;ERATE=0.0003;THETA=0.0009;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 16847190 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.975;LDAF=0.5291;AVGPOST=0.9793;RSQ=0.9743;ERATE=0.0038;THETA=0.0018;AC=1164;AN=2184 GT:DS:GL:BD 0.53296703 1
1 16847315 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.919;BRSQ=0.781;LDAF=0.2357;AVGPOST=0.9087;RSQ=0.8094;ERATE=0.0207;THETA=0.0008;AC=468;AN=2184 GT:DS:GL:BD 0.21428572 0
1 16847328 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0036;AVGPOST=0.9994;RSQ=0.9337;ERATE=0.0003;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16847334 . CAGA C 194 PASS INDEL;BAVGPOST=0.983;BRSQ=0.367;LDAF=0.0221;AVGPOST=0.9742;RSQ=0.5465;ERATE=0.0033;THETA=0.0019;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 16847395 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.758;LDAF=0.0047;AVGPOST=0.9961;RSQ=0.6423;ERATE=0.0010;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16847415 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0132;AVGPOST=0.9983;RSQ=0.9537;ERATE=0.0004;THETA=0.0053;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 16847470 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.974;LDAF=0.5468;AVGPOST=0.9789;RSQ=0.9734;ERATE=0.0016;THETA=0.0029;AC=1194;AN=2184 GT:DS:GL:BD 0.54670328 1
1 16847492 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.718;LDAF=0.0025;AVGPOST=0.9977;RSQ=0.6089;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16847509 rs5772676 AG A 145 PASS INDEL;BAVGPOST=0.983;BRSQ=0.559;LDAF=0.0232;AVGPOST=0.9768;RSQ=0.5935;ERATE=0.0059;THETA=0.0013;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 16847514 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0267;AVGPOST=0.9995;RSQ=0.9912;ERATE=0.0003;THETA=0.0010;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 16847550 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.737;LDAF=0.0408;AVGPOST=0.9800;RSQ=0.8177;ERATE=0.0006;THETA=0.0004;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 16847578 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0436;AVGPOST=0.9975;RSQ=0.9798;ERATE=0.0003;THETA=0.0008;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 16847605 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.945;LDAF=0.2187;AVGPOST=0.9809;RSQ=0.9653;ERATE=0.0021;THETA=0.0007;AC=478;AN=2184 GT:DS:GL:BD 0.21886447 0
1 16847675 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.622;LDAF=0.0040;AVGPOST=0.9973;RSQ=0.7115;ERATE=0.0007;THETA=0.0015;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16847775 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0265;AVGPOST=0.9995;RSQ=0.9911;ERATE=0.0003;THETA=0.0023;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 16847832 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.977;LDAF=0.5881;AVGPOST=0.9862;RSQ=0.9818;ERATE=0.0010;THETA=0.0006;AC=1285;AN=2184 GT:DS:GL:BD 0.58836997 1
1 16847850 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0271;AVGPOST=0.9981;RSQ=0.9729;ERATE=0.0004;THETA=0.0012;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 16847985 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6368;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16848016 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.867;LDAF=0.0157;AVGPOST=0.9972;RSQ=0.9276;ERATE=0.0004;THETA=0.0037;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 16848029 rs71574190 T TTTTG 58003 PASS INDEL;BAVGPOST=0.977;BRSQ=0.951;LDAF=0.7538;AVGPOST=0.9608;RSQ=0.9320;ERATE=0.0052;THETA=0.0043;AC=1668;AN=2184 GT:DS:GL:BD 0.76373625 1
1 16848102 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.619;LDAF=0.0047;AVGPOST=0.9981;RSQ=0.8491;ERATE=0.0003;THETA=0.0014;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16848305 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.8124;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16848338 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.703;LDAF=0.0031;AVGPOST=0.9972;RSQ=0.6841;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16848518 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.693;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0066;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16848519 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6171;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16848652 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.5641;AVGPOST=0.9914;RSQ=0.9882;ERATE=0.0006;THETA=0.0023;AC=1234;AN=2184 GT:DS:GL:BD 0.56501830 1
1 16848704 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8333;ERATE=0.0004;THETA=0.0018;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16848705 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.814;LDAF=0.0044;AVGPOST=0.9985;RSQ=0.8533;ERATE=0.0003;THETA=0.0027;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16848711 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6872;ERATE=0.0004;THETA=0.0045;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16848733 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8519;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16848736 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6947;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16848948 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0022;AVGPOST=0.9965;RSQ=0.3641;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16848954 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.802;LDAF=0.0082;AVGPOST=0.9919;RSQ=0.6360;ERATE=0.0013;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16848978 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.885;LDAF=0.0061;AVGPOST=0.9973;RSQ=0.8310;ERATE=0.0004;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 16848997 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.890;LDAF=0.0220;AVGPOST=0.9933;RSQ=0.8922;ERATE=0.0005;THETA=0.0034;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 16849125 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.670;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.6942;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16849162 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0056;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16849217 . C CT 1338 PASS INDEL;BAVGPOST=0.992;BRSQ=0.904;LDAF=0.0427;AVGPOST=0.9830;RSQ=0.8277;ERATE=0.0106;THETA=0.0027;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 16849266 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16849363 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0271;AVGPOST=0.9988;RSQ=0.9797;ERATE=0.0003;THETA=0.0044;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 16849392 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6195;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16849396 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7212;ERATE=0.0007;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16849474 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16849515 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0162;AVGPOST=0.9997;RSQ=0.9904;ERATE=0.0003;THETA=0.0006;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 16849546 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5775;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16849639 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16849660 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.980;LDAF=0.7764;AVGPOST=0.9933;RSQ=0.9874;ERATE=0.0004;THETA=0.0008;AC=1697;AN=2184 GT:DS:GL:BD 0.77701467 1
1 16849729 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.857;LDAF=0.0078;AVGPOST=0.9973;RSQ=0.8790;ERATE=0.0005;THETA=0.0009;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 16849754 . AG A 246 PASS INDEL;BAVGPOST=0.999;BRSQ=0.698;LDAF=0.0049;AVGPOST=0.9937;RSQ=0.4253;ERATE=0.0008;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16849773 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0163;AVGPOST=0.9994;RSQ=0.9853;ERATE=0.0003;THETA=0.0006;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 16849776 . CCA C 3045 PASS INDEL;BAVGPOST=0.955;BRSQ=0.749;LDAF=0.1340;AVGPOST=0.9174;RSQ=0.6721;ERATE=0.0540;THETA=0.0007;AC=212;AN=2184 GT:DS:GL:BD 0.09706960 0
1 16849802 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.885;LDAF=0.0113;AVGPOST=0.9990;RSQ=0.9598;ERATE=0.0004;THETA=0.0007;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 16849862 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0162;AVGPOST=0.9996;RSQ=0.9875;ERATE=0.0003;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 16849955 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.964;BRSQ=0.550;LDAF=0.0315;AVGPOST=0.9797;RSQ=0.7541;ERATE=0.0004;THETA=0.0007;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 16850013 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.990;LDAF=0.6064;AVGPOST=0.9903;RSQ=0.9869;ERATE=0.0004;THETA=0.0010;AC=1325;AN=2184 GT:DS:GL:BD 0.60668498 1
1 16850053 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.848;LDAF=0.0053;AVGPOST=0.9971;RSQ=0.7840;ERATE=0.0005;THETA=0.0049;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16850086 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0228;AVGPOST=0.9992;RSQ=0.9865;ERATE=0.0003;THETA=0.0030;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 16850260 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.0036;AVGPOST=0.9993;RSQ=0.9206;ERATE=0.0003;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16850283 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0116;AVGPOST=0.9985;RSQ=0.9437;ERATE=0.0004;THETA=0.0006;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 16850320 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5464;ERATE=0.0004;THETA=0.0053;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16850328 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.851;LDAF=0.0443;AVGPOST=0.9816;RSQ=0.8388;ERATE=0.0033;THETA=0.0032;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 16850454 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.779;LDAF=0.0103;AVGPOST=0.9939;RSQ=0.7875;ERATE=0.0004;THETA=0.0011;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 16850567 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.868;LDAF=0.0186;AVGPOST=0.9927;RSQ=0.8361;ERATE=0.0018;THETA=0.0007;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 16850647 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.914;LDAF=0.0618;AVGPOST=0.9834;RSQ=0.9021;ERATE=0.0037;THETA=0.0023;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 16850718 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.643;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16850743 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6885;ERATE=0.0004;THETA=0.0025;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16850775 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0051;AVGPOST=0.9971;RSQ=0.7812;ERATE=0.0003;THETA=0.0031;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16850855 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6495;ERATE=0.0003;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16850887 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.825;LDAF=0.0147;AVGPOST=0.9966;RSQ=0.8997;ERATE=0.0007;THETA=0.0009;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 16850966 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.777;LDAF=0.0070;AVGPOST=0.9954;RSQ=0.7652;ERATE=0.0006;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 16850976 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.774;LDAF=0.0071;AVGPOST=0.9955;RSQ=0.7574;ERATE=0.0004;THETA=0.0046;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 16850984 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.717;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7042;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16851004 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.871;LDAF=0.0024;AVGPOST=0.9986;RSQ=0.7722;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16851129 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0021;AVGPOST=0.9968;RSQ=0.3903;ERATE=0.0007;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16851219 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.711;LDAF=0.0131;AVGPOST=0.9922;RSQ=0.7520;ERATE=0.0016;THETA=0.0021;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 16851223 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.856;LDAF=0.0062;AVGPOST=0.9981;RSQ=0.8781;ERATE=0.0004;THETA=0.0026;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 16851250 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16851330 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.717;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6259;ERATE=0.0004;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16851440 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.983;LDAF=0.1752;AVGPOST=0.9885;RSQ=0.9741;ERATE=0.0003;THETA=0.0014;AC=383;AN=2184 GT:DS:GL:BD 0.17536630 0
1 16851489 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0265;AVGPOST=0.9993;RSQ=0.9879;ERATE=0.0003;THETA=0.0023;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 16851674 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5857;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16851699 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.923;LDAF=0.0290;AVGPOST=0.9956;RSQ=0.9450;ERATE=0.0003;THETA=0.0011;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 16851839 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.767;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6378;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16851881 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16851932 . TC T 82 PASS INDEL;BAVGPOST=1.000;BRSQ=0.755;LDAF=0.0021;AVGPOST=0.9965;RSQ=0.2532;ERATE=0.0008;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16851990 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16852039 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.802;LDAF=0.0217;AVGPOST=0.9879;RSQ=0.7774;ERATE=0.0038;THETA=0.0050;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 16852046 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.796;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.8148;ERATE=0.0004;THETA=0.0022;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16852079 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.927;LDAF=0.0082;AVGPOST=0.9987;RSQ=0.9398;ERATE=0.0004;THETA=0.0011;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 16852166 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0161;AVGPOST=0.9997;RSQ=0.9904;ERATE=0.0003;THETA=0.0012;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 16852241 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9148;ERATE=0.0003;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16852282 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0141;AVGPOST=0.9985;RSQ=0.9568;ERATE=0.0003;THETA=0.0009;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 16852398 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0095;AVGPOST=0.9989;RSQ=0.9512;ERATE=0.0003;THETA=0.0016;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 16852407 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0004;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16852494 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0162;AVGPOST=0.9996;RSQ=0.9889;ERATE=0.0004;THETA=0.0022;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 16852522 rs5772677 AC A 145 PASS INDEL;BAVGPOST=0.988;BRSQ=0.574;LDAF=0.0153;AVGPOST=0.9866;RSQ=0.6554;ERATE=0.0012;THETA=0.0058;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 16852664 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0267;AVGPOST=0.9981;RSQ=0.9700;ERATE=0.0004;THETA=0.0015;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 16852674 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.761;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4843;ERATE=0.0005;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16852804 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.931;LDAF=0.0254;AVGPOST=0.9959;RSQ=0.9343;ERATE=0.0004;THETA=0.0008;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 16852840 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0436;AVGPOST=0.9952;RSQ=0.9610;ERATE=0.0005;THETA=0.0024;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 16852865 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.978;LDAF=0.7724;AVGPOST=0.9736;RSQ=0.9509;ERATE=0.0005;THETA=0.0175;AC=1700;AN=2184 GT:DS:GL:BD 0.77838826 1
1 16853105 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.7972;ERATE=0.0004;THETA=0.0080;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16853163 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0051;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16853235 . AGT A 731 PASS INDEL;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0304;AVGPOST=0.9915;RSQ=0.8774;ERATE=0.0007;THETA=0.0013;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 16853314 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.470;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.3513;ERATE=0.0005;THETA=0.0092;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16853365 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.683;LDAF=0.0160;AVGPOST=0.9876;RSQ=0.6587;ERATE=0.0014;THETA=0.0028;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 16853366 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.662;LDAF=0.0078;AVGPOST=0.9920;RSQ=0.6311;ERATE=0.0005;THETA=0.0169;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 16853412 rs57404988 AT A 2335 PASS INDEL;BAVGPOST=0.689;BRSQ=0.458;LDAF=0.3810;AVGPOST=0.7258;RSQ=0.5774;ERATE=0.0038;THETA=0.0034;AC=854;AN=2184 GT:DS:GL:BD 0.39102563 0
1 16853592 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0267;AVGPOST=0.9964;RSQ=0.9487;ERATE=0.0003;THETA=0.0031;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 16853601 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.673;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5595;ERATE=0.0003;THETA=0.0045;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16853616 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.700;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5565;ERATE=0.0004;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16853724 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.542;LDAF=0.0033;AVGPOST=0.9962;RSQ=0.5013;ERATE=0.0006;THETA=0.0034;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16853758 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.811;LDAF=0.0158;AVGPOST=0.9900;RSQ=0.7392;ERATE=0.0007;THETA=0.0017;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 16853770 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0107;AVGPOST=0.9952;RSQ=0.8170;ERATE=0.0005;THETA=0.0116;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 16853785 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.825;LDAF=0.0148;AVGPOST=0.9915;RSQ=0.7550;ERATE=0.0004;THETA=0.0035;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 16853907 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.768;LDAF=0.0776;AVGPOST=0.9526;RSQ=0.7392;ERATE=0.0096;THETA=0.0088;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 16853971 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0068;AVGPOST=0.9974;RSQ=0.8486;ERATE=0.0004;THETA=0.0027;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 16854019 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7094;ERATE=0.0003;THETA=0.0112;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16854025 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.697;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0005;THETA=0.0083;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16854233 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.915;LDAF=0.0202;AVGPOST=0.9945;RSQ=0.9073;ERATE=0.0005;THETA=0.0085;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 16854344 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.722;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8951;ERATE=0.0003;THETA=0.0106;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16854366 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.862;LDAF=0.0574;AVGPOST=0.9835;RSQ=0.8921;ERATE=0.0013;THETA=0.0117;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 16854462 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.920;LDAF=0.0787;AVGPOST=0.9812;RSQ=0.9107;ERATE=0.0017;THETA=0.0055;AC=165;AN=2184 GT:DS:GL:BD 0.07554945 0
1 16854508 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6553;ERATE=0.0003;THETA=0.0082;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16854523 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7123;ERATE=0.0003;THETA=0.0079;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16854627 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.795;LDAF=0.0019;AVGPOST=0.9986;RSQ=0.6560;ERATE=0.0005;THETA=0.0088;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16854645 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6942;ERATE=0.0003;THETA=0.0027;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16854792 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0108;AVGPOST=0.9987;RSQ=0.9532;ERATE=0.0004;THETA=0.0080;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 16854798 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5256;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16854804 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0108;AVGPOST=0.9991;RSQ=0.9711;ERATE=0.0003;THETA=0.0054;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 16854816 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.689;LDAF=0.0028;AVGPOST=0.9979;RSQ=0.7137;ERATE=0.0006;THETA=0.0019;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16854892 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0139;AVGPOST=0.9986;RSQ=0.9576;ERATE=0.0003;THETA=0.0076;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 16854916 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6922;ERATE=0.0004;THETA=0.0057;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16854945 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7701;ERATE=0.0003;THETA=0.0121;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16855130 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.852;LDAF=0.0511;AVGPOST=0.9803;RSQ=0.8422;ERATE=0.0036;THETA=0.0135;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 16855306 . A AT 88 PASS INDEL;BAVGPOST=0.989;BRSQ=0.642;LDAF=0.0147;AVGPOST=0.9890;RSQ=0.7053;ERATE=0.0006;THETA=0.0185;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 16855403 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0163;AVGPOST=0.9953;RSQ=0.8830;ERATE=0.0005;THETA=0.0108;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 16855747 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.962;BRSQ=0.785;LDAF=0.1058;AVGPOST=0.9498;RSQ=0.7768;ERATE=0.0187;THETA=0.0083;AC=206;AN=2184 GT:DS:GL:BD 0.09432235 0
1 16855813 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0040;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16855821 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.803;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.8720;ERATE=0.0005;THETA=0.0022;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16855908 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.888;LDAF=0.0083;AVGPOST=0.9957;RSQ=0.8180;ERATE=0.0003;THETA=0.0034;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 16855919 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0117;AVGPOST=0.9995;RSQ=0.9799;ERATE=0.0003;THETA=0.0029;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 16856232 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0258;AVGPOST=0.9981;RSQ=0.9702;ERATE=0.0003;THETA=0.0042;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 16856277 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0003;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16856366 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7300;ERATE=0.0003;THETA=0.0112;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16856557 . A AG 920 PASS INDEL;BAVGPOST=0.976;BRSQ=0.731;LDAF=0.0551;AVGPOST=0.9636;RSQ=0.7050;ERATE=0.0176;THETA=0.0062;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 16857318 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.877;LDAF=0.0252;AVGPOST=0.9941;RSQ=0.9083;ERATE=0.0007;THETA=0.0059;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 16857323 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.571;LDAF=0.0170;AVGPOST=0.9872;RSQ=0.6798;ERATE=0.0006;THETA=0.0068;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 16857378 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4889;ERATE=0.0006;THETA=0.0200;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16857628 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.703;LDAF=0.0142;AVGPOST=0.9848;RSQ=0.5934;ERATE=0.0005;THETA=0.0075;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 16857646 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0243;AVGPOST=0.9948;RSQ=0.9252;ERATE=0.0005;THETA=0.0087;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 16857681 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.937;BRSQ=0.724;LDAF=0.1379;AVGPOST=0.9363;RSQ=0.7783;ERATE=0.0009;THETA=0.0007;AC=257;AN=2184 GT:DS:GL:BD 0.11767399 0
1 16857682 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.935;BRSQ=0.729;LDAF=0.1556;AVGPOST=0.9211;RSQ=0.7449;ERATE=0.0011;THETA=0.0049;AC=278;AN=2184 GT:DS:GL:BD 0.12728938 0
1 16857687 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.935;BRSQ=0.728;LDAF=0.1466;AVGPOST=0.9303;RSQ=0.7680;ERATE=0.0009;THETA=0.0017;AC=266;AN=2184 GT:DS:GL:BD 0.12179487 0
1 16857691 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.879;BRSQ=0.624;LDAF=0.2392;AVGPOST=0.8557;RSQ=0.6411;ERATE=0.0103;THETA=0.0044;AC=408;AN=2184 GT:DS:GL:BD 0.18681319 0
1 16857769 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.874;LDAF=0.0233;AVGPOST=0.9931;RSQ=0.8963;ERATE=0.0004;THETA=0.0035;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 16857807 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.325;LDAF=0.0023;AVGPOST=0.9970;RSQ=0.4039;ERATE=0.0007;THETA=0.0166;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16857812 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.950;BRSQ=0.612;LDAF=0.0595;AVGPOST=0.9671;RSQ=0.7908;ERATE=0.0005;THETA=0.0081;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 16858197 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.713;LDAF=0.0237;AVGPOST=0.9826;RSQ=0.7218;ERATE=0.0005;THETA=0.0143;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 16858800 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0015;AVGPOST=0.9993;RSQ=0.7878;ERATE=0.0003;THETA=0.0070;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16858816 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.950;LDAF=0.0243;AVGPOST=0.9966;RSQ=0.9475;ERATE=0.0004;THETA=0.0062;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 16858864 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9181;ERATE=0.0003;THETA=0.0046;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16859310 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.913;LDAF=0.0114;AVGPOST=0.9952;RSQ=0.8406;ERATE=0.0009;THETA=0.0063;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 16859536 . G GA 45 PASS INDEL;BAVGPOST=0.987;BRSQ=0.563;LDAF=0.0133;AVGPOST=0.9837;RSQ=0.5121;ERATE=0.0012;THETA=0.0020;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 16859538 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.862;LDAF=0.0238;AVGPOST=0.9849;RSQ=0.7628;ERATE=0.0012;THETA=0.0140;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 16859553 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.691;LDAF=0.0111;AVGPOST=0.9917;RSQ=0.7233;ERATE=0.0005;THETA=0.0061;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 16860548 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6617;ERATE=0.0006;THETA=0.0159;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16860563 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6337;ERATE=0.0003;THETA=0.0163;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16860587 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0283;AVGPOST=0.9969;RSQ=0.9553;ERATE=0.0003;THETA=0.0199;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 16860945 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.931;BRSQ=0.576;LDAF=0.1131;AVGPOST=0.9035;RSQ=0.5941;ERATE=0.0279;THETA=0.0080;AC=172;AN=2184 GT:DS:GL:BD 0.07875458 0
1 16860988 rs3981615 CCT C 31861 PASS INDEL;BAVGPOST=0.913;BRSQ=0.654;LDAF=0.3541;AVGPOST=0.9083;RSQ=0.7082;ERATE=0.0600;THETA=0.0113;AC=702;AN=2184 GT:DS:GL:BD 0.32142857 0
1 16861648 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.794;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7732;ERATE=0.0010;THETA=0.0082;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16861718 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.896;BRSQ=0.638;LDAF=0.2025;AVGPOST=0.8936;RSQ=0.7109;ERATE=0.0072;THETA=0.0117;AC=369;AN=2184 GT:DS:GL:BD 0.16895604 0
1 16861766 . T TA 902 PASS INDEL;BAVGPOST=0.989;BRSQ=0.583;LDAF=0.0124;AVGPOST=0.9883;RSQ=0.6015;ERATE=0.0020;THETA=0.0025;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 16862133 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.556;LDAF=0.0035;AVGPOST=0.9958;RSQ=0.5043;ERATE=0.0011;THETA=0.0044;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16863054 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.656;LDAF=0.9447;AVGPOST=0.9319;RSQ=0.4720;ERATE=0.0034;THETA=0.0092;AC=2131;AN=2184 GT:DS:GL:BD 0.97573262 1
1 16863064 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.665;BRSQ=0.336;LDAF=0.4287;AVGPOST=0.7298;RSQ=0.4441;ERATE=0.0396;THETA=0.0019;AC=821;AN=2184 GT:DS:GL:BD 0.37591577 0
1 16863278 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.787;LDAF=0.0059;AVGPOST=0.9973;RSQ=0.8245;ERATE=0.0004;THETA=0.0094;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 16863640 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.931;LDAF=0.0138;AVGPOST=0.9973;RSQ=0.9268;ERATE=0.0004;THETA=0.0079;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 16864048 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.964;LDAF=0.0709;AVGPOST=0.9931;RSQ=0.9556;ERATE=0.0014;THETA=0.0105;AC=151;AN=2184 GT:DS:GL:BD 0.06913920 0
1 16864255 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0108;AVGPOST=0.9994;RSQ=0.9770;ERATE=0.0003;THETA=0.0045;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 16864695 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16864791 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.0029;AVGPOST=0.9982;RSQ=0.7477;ERATE=0.0006;THETA=0.0034;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16865032 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.870;LDAF=0.0032;AVGPOST=0.9992;RSQ=0.8775;ERATE=0.0008;THETA=0.0127;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16865066 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.836;LDAF=0.0572;AVGPOST=0.9752;RSQ=0.8292;ERATE=0.0017;THETA=0.0127;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 16865177 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.792;LDAF=0.0049;AVGPOST=0.9980;RSQ=0.8381;ERATE=0.0003;THETA=0.0122;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16865185 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.715;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4941;ERATE=0.0004;THETA=0.0043;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16865251 . GAGA G 117 PASS INDEL;BAVGPOST=0.999;BRSQ=0.723;LDAF=0.0025;AVGPOST=0.9968;RSQ=0.3933;ERATE=0.0011;THETA=0.0027;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16865257 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.741;LDAF=0.0046;AVGPOST=0.9971;RSQ=0.7387;ERATE=0.0007;THETA=0.0047;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16865287 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.921;LDAF=0.0508;AVGPOST=0.9885;RSQ=0.9074;ERATE=0.0005;THETA=0.0042;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 16865406 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.962;LDAF=0.0277;AVGPOST=0.9968;RSQ=0.9520;ERATE=0.0004;THETA=0.0038;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 16865407 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.771;LDAF=0.0503;AVGPOST=0.9722;RSQ=0.7854;ERATE=0.0018;THETA=0.0097;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 16865750 . GC G 65 PASS INDEL;BAVGPOST=0.996;BRSQ=0.324;LDAF=0.0094;AVGPOST=0.9831;RSQ=0.2081;ERATE=0.0015;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16865770 . CT C 7669 PASS INDEL;BAVGPOST=0.814;BRSQ=0.471;LDAF=0.2406;AVGPOST=0.7909;RSQ=0.5804;ERATE=0.0064;THETA=0.0066;AC=335;AN=2184 GT:DS:GL:BD 0.15338828 0
1 16865892 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.716;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5571;ERATE=0.0004;THETA=0.0110;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16865902 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0226;AVGPOST=0.9962;RSQ=0.9287;ERATE=0.0005;THETA=0.0235;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 16865918 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5839;ERATE=0.0003;THETA=0.0046;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16865993 . CT C 86 PASS INDEL;BAVGPOST=0.998;BRSQ=0.268;LDAF=0.0086;AVGPOST=0.9849;RSQ=0.2046;ERATE=0.0014;THETA=0.0104;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16866676 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.687;LDAF=0.0191;AVGPOST=0.9861;RSQ=0.6960;ERATE=0.0011;THETA=0.0012;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 16866904 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.759;LDAF=0.0046;AVGPOST=0.9973;RSQ=0.7467;ERATE=0.0026;THETA=0.0059;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16867032 rs71577276 TC T 8341 PASS INDEL;BAVGPOST=0.860;BRSQ=0.575;LDAF=0.2542;AVGPOST=0.8654;RSQ=0.7104;ERATE=0.0419;THETA=0.0065;AC=495;AN=2184 GT:DS:GL:BD 0.22664835 0
1 16867256 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.933;BRSQ=0.841;LDAF=0.7366;AVGPOST=0.8857;RSQ=0.7753;ERATE=0.0033;THETA=0.0139;AC=1660;AN=2184 GT:DS:GL:BD 0.76007324 1
1 16867434 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.785;LDAF=0.0610;AVGPOST=0.9785;RSQ=0.8558;ERATE=0.0024;THETA=0.0087;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 16867678 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.969;LDAF=0.0694;AVGPOST=0.9882;RSQ=0.9251;ERATE=0.0028;THETA=0.0146;AC=144;AN=2184 GT:DS:GL:BD 0.06593407 0
1 16868130 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.887;BRSQ=0.791;LDAF=0.6264;AVGPOST=0.8633;RSQ=0.7767;ERATE=0.0128;THETA=0.0227;AC=1393;AN=2184 GT:DS:GL:BD 0.63782054 1
1 16868995 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0112;AVGPOST=0.9976;RSQ=0.9129;ERATE=0.0004;THETA=0.0126;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 16869298 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.619;LDAF=0.0024;AVGPOST=0.9981;RSQ=0.6633;ERATE=0.0007;THETA=0.0072;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16869331 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0229;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16869376 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.828;LDAF=0.0062;AVGPOST=0.9982;RSQ=0.8713;ERATE=0.0003;THETA=0.0059;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 16869483 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.530;LDAF=0.0042;AVGPOST=0.9954;RSQ=0.5692;ERATE=0.0006;THETA=0.0028;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16871298 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.922;BRSQ=0.796;LDAF=0.2772;AVGPOST=0.9320;RSQ=0.8566;ERATE=0.0140;THETA=0.0135;AC=576;AN=2184 GT:DS:GL:BD 0.26373628 0
1 16871455 rs59030778 C CT 25674 PASS INDEL;BAVGPOST=0.865;BRSQ=0.521;LDAF=0.4103;AVGPOST=0.8712;RSQ=0.5879;ERATE=0.0454;THETA=0.0024;AC=845;AN=2184 GT:DS:GL:BD 0.38690478 0
1 16871486 . CT C 801 PASS INDEL;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0107;AVGPOST=0.9973;RSQ=0.8879;ERATE=0.0004;THETA=0.0079;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 16871719 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.937;BRSQ=0.751;LDAF=0.1746;AVGPOST=0.9237;RSQ=0.7645;ERATE=0.0075;THETA=0.0050;AC=339;AN=2184 GT:DS:GL:BD 0.15521978 0
1 16871746 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.928;BRSQ=0.704;LDAF=0.1519;AVGPOST=0.9341;RSQ=0.7800;ERATE=0.0012;THETA=0.0163;AC=308;AN=2184 GT:DS:GL:BD 0.14102565 0
1 16871747 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.798;LDAF=0.0229;AVGPOST=0.9868;RSQ=0.7603;ERATE=0.0011;THETA=0.0169;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 16871800 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.824;LDAF=0.0793;AVGPOST=0.9760;RSQ=0.8568;ERATE=0.0013;THETA=0.0111;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 16871915 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.714;LDAF=0.0028;AVGPOST=0.9979;RSQ=0.6688;ERATE=0.0005;THETA=0.0128;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16871925 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.773;LDAF=0.0027;AVGPOST=0.9984;RSQ=0.7014;ERATE=0.0003;THETA=0.0058;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16871932 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.692;LDAF=0.0034;AVGPOST=0.9973;RSQ=0.6899;ERATE=0.0009;THETA=0.0014;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16871940 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.768;LDAF=0.0032;AVGPOST=0.9966;RSQ=0.6243;ERATE=0.0006;THETA=0.0039;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16872022 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0674;AVGPOST=0.9899;RSQ=0.9282;ERATE=0.0005;THETA=0.0082;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 16872340 . TG T 154 PASS INDEL;BAVGPOST=0.992;BRSQ=0.178;LDAF=0.0115;AVGPOST=0.9794;RSQ=0.2293;ERATE=0.0018;THETA=0.0105;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16872388 . CG C 1547 PASS INDEL;BAVGPOST=0.954;BRSQ=0.374;LDAF=0.0548;AVGPOST=0.9207;RSQ=0.3513;ERATE=0.0050;THETA=0.0053;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 16872391 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.690;LDAF=0.0084;AVGPOST=0.9938;RSQ=0.6992;ERATE=0.0006;THETA=0.0067;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16872420 . G GA 1558 PASS INDEL;BAVGPOST=0.995;BRSQ=0.926;LDAF=0.0286;AVGPOST=0.9954;RSQ=0.9345;ERATE=0.0015;THETA=0.0190;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 16872437 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.708;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4482;ERATE=0.0005;THETA=0.0047;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16872438 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.849;LDAF=0.0130;AVGPOST=0.9976;RSQ=0.9210;ERATE=0.0004;THETA=0.0093;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 16872439 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.943;LDAF=0.0202;AVGPOST=0.9966;RSQ=0.9359;ERATE=0.0003;THETA=0.0127;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 16872482 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.657;LDAF=0.0276;AVGPOST=0.9791;RSQ=0.6765;ERATE=0.0048;THETA=0.0173;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 16872502 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.782;LDAF=0.0332;AVGPOST=0.9856;RSQ=0.8180;ERATE=0.0010;THETA=0.0122;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 16872520 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.946;BRSQ=0.892;LDAF=0.5753;AVGPOST=0.9457;RSQ=0.9094;ERATE=0.0134;THETA=0.0047;AC=1250;AN=2184 GT:DS:GL:BD 0.57234430 1
1 16872548 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0045;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16873018 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.790;LDAF=0.0277;AVGPOST=0.9853;RSQ=0.7958;ERATE=0.0030;THETA=0.0162;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 16873089 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.693;LDAF=0.0059;AVGPOST=0.9946;RSQ=0.6764;ERATE=0.0005;THETA=0.0108;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16873124 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.541;LDAF=0.0024;AVGPOST=0.9969;RSQ=0.5168;ERATE=0.0006;THETA=0.0063;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16873133 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8016;ERATE=0.0003;THETA=0.0150;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16873174 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.727;LDAF=0.0059;AVGPOST=0.9964;RSQ=0.7498;ERATE=0.0014;THETA=0.0131;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16873179 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.682;LDAF=0.0179;AVGPOST=0.9853;RSQ=0.6862;ERATE=0.0006;THETA=0.0071;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 16873183 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.871;BRSQ=0.794;LDAF=0.4749;AVGPOST=0.8781;RSQ=0.8360;ERATE=0.0116;THETA=0.0098;AC=1071;AN=2184 GT:DS:GL:BD 0.49038461 0
1 16873210 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.631;LDAF=0.0031;AVGPOST=0.9982;RSQ=0.7336;ERATE=0.0006;THETA=0.0131;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16873479 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.795;LDAF=0.0306;AVGPOST=0.9830;RSQ=0.7968;ERATE=0.0005;THETA=0.0256;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 16874041 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.955;BRSQ=0.796;LDAF=0.1352;AVGPOST=0.9507;RSQ=0.8188;ERATE=0.0096;THETA=0.0093;AC=268;AN=2184 GT:DS:GL:BD 0.12271062 0
1 16874152 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.472;LDAF=0.0051;AVGPOST=0.9928;RSQ=0.3735;ERATE=0.0007;THETA=0.0045;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16874158 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.488;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.3356;ERATE=0.0006;THETA=0.0112;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16875577 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.965;BRSQ=0.645;LDAF=0.0548;AVGPOST=0.9538;RSQ=0.6451;ERATE=0.0107;THETA=0.0065;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 16875629 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.905;BRSQ=0.693;LDAF=0.2137;AVGPOST=0.9074;RSQ=0.7647;ERATE=0.0009;THETA=0.0021;AC=400;AN=2184 GT:DS:GL:BD 0.18315019 0
1 16875635 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.912;BRSQ=0.719;LDAF=0.1988;AVGPOST=0.9177;RSQ=0.7788;ERATE=0.0009;THETA=0.0018;AC=379;AN=2184 GT:DS:GL:BD 0.17353480 0
1 16875641 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.913;BRSQ=0.720;LDAF=0.1980;AVGPOST=0.9185;RSQ=0.7827;ERATE=0.0006;THETA=0.0160;AC=379;AN=2184 GT:DS:GL:BD 0.17353480 0
1 16875648 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.501;LDAF=0.0064;AVGPOST=0.9924;RSQ=0.5524;ERATE=0.0006;THETA=0.0182;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16875655 rs112391347 TG T 845 PASS INDEL;BAVGPOST=0.985;BRSQ=0.386;LDAF=0.0372;AVGPOST=0.9379;RSQ=0.2583;ERATE=0.0055;THETA=0.0128;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 16875662 . A AC 1721 PASS INDEL;BAVGPOST=0.871;BRSQ=0.441;LDAF=0.1530;AVGPOST=0.8611;RSQ=0.5697;ERATE=0.0154;THETA=0.0067;AC=211;AN=2184 GT:DS:GL:BD 0.09661172 0
1 16876690 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.522;LDAF=0.0156;AVGPOST=0.9822;RSQ=0.5583;ERATE=0.0013;THETA=0.0172;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 16876698 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0140;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16876711 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.779;LDAF=0.0070;AVGPOST=0.9981;RSQ=0.8921;ERATE=0.0003;THETA=0.0255;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 16876746 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.827;LDAF=0.0395;AVGPOST=0.9835;RSQ=0.8399;ERATE=0.0009;THETA=0.0102;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 16878119 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.830;BRSQ=0.712;LDAF=0.4349;AVGPOST=0.8561;RSQ=0.8044;ERATE=0.0015;THETA=0.0062;AC=965;AN=2184 GT:DS:GL:BD 0.44184983 0
1 16878121 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.824;BRSQ=0.701;LDAF=0.4284;AVGPOST=0.8482;RSQ=0.7943;ERATE=0.0021;THETA=0.0126;AC=957;AN=2184 GT:DS:GL:BD 0.43818682 0
1 16878231 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.874;BRSQ=0.802;LDAF=0.4930;AVGPOST=0.8713;RSQ=0.8252;ERATE=0.0178;THETA=0.0182;AC=1124;AN=2184 GT:DS:GL:BD 0.51465201 1
1 16878473 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.855;LDAF=0.0689;AVGPOST=0.9780;RSQ=0.8597;ERATE=0.0022;THETA=0.0146;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 16881334 . GAGA G 259 PASS INDEL;BAVGPOST=0.954;BRSQ=0.115;LDAF=0.0875;AVGPOST=0.8439;RSQ=0.1567;ERATE=0.0065;THETA=0.0288;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 16881486 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.511;LDAF=0.0203;AVGPOST=0.9803;RSQ=0.6117;ERATE=0.0028;THETA=0.0156;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 16881495 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.631;LDAF=0.0335;AVGPOST=0.9725;RSQ=0.6772;ERATE=0.0061;THETA=0.0273;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 16883904 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.928;BRSQ=0.714;LDAF=0.1318;AVGPOST=0.9186;RSQ=0.7409;ERATE=0.0093;THETA=0.0394;AC=231;AN=2184 GT:DS:GL:BD 0.10576923 0
1 16884061 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.851;BRSQ=0.474;LDAF=0.1543;AVGPOST=0.8642;RSQ=0.5724;ERATE=0.0023;THETA=0.0072;AC=211;AN=2184 GT:DS:GL:BD 0.09661172 0
1 16884064 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.848;BRSQ=0.470;LDAF=0.1415;AVGPOST=0.8798;RSQ=0.5954;ERATE=0.0018;THETA=0.0247;AC=198;AN=2184 GT:DS:GL:BD 0.09065934 0
1 16884230 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.961;BRSQ=0.726;LDAF=0.0644;AVGPOST=0.9679;RSQ=0.7949;ERATE=0.0024;THETA=0.0294;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 16884287 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.836;BRSQ=0.522;LDAF=0.2188;AVGPOST=0.8395;RSQ=0.5770;ERATE=0.0069;THETA=0.0399;AC=339;AN=2184 GT:DS:GL:BD 0.15521978 0
1 16884293 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.793;BRSQ=0.558;LDAF=0.3364;AVGPOST=0.8069;RSQ=0.6090;ERATE=0.0158;THETA=0.0150;AC=625;AN=2184 GT:DS:GL:BD 0.28617215 0
1 16884299 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.807;BRSQ=0.520;LDAF=0.2539;AVGPOST=0.8327;RSQ=0.6206;ERATE=0.0058;THETA=0.0242;AC=449;AN=2184 GT:DS:GL:BD 0.20558608 0
1 16884556 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.743;BRSQ=0.579;LDAF=0.5366;AVGPOST=0.7606;RSQ=0.6526;ERATE=0.0035;THETA=0.0502;AC=1190;AN=2184 GT:DS:GL:BD 0.54487181 1
1 16884814 . A AG 829 PASS INDEL;BAVGPOST=0.974;BRSQ=0.482;LDAF=0.0329;AVGPOST=0.9624;RSQ=0.4948;ERATE=0.0032;THETA=0.0287;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 16884848 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.352;LDAF=0.9930;AVGPOST=0.9900;RSQ=0.3985;ERATE=0.0009;THETA=0.0353;AC=2179;AN=2184 GT:DS:GL:BD 0.99771065 1
1 16886532 . AC A 221 PASS INDEL;BAVGPOST=0.999;BRSQ=0.681;LDAF=0.0048;AVGPOST=0.9935;RSQ=0.3876;ERATE=0.0010;THETA=0.0184;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16888048 . CAAAG C 254 PASS INDEL;BAVGPOST=1.000;BRSQ=0.767;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.3819;ERATE=0.0005;THETA=0.0303;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16888736 . GA G 1950 PASS INDEL;BAVGPOST=0.986;BRSQ=0.705;LDAF=0.0219;AVGPOST=0.9914;RSQ=0.8105;ERATE=0.0015;THETA=0.0352;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 16889889 rs71254015 CTG C 20085 PASS INDEL;BAVGPOST=0.796;BRSQ=0.490;LDAF=0.3177;AVGPOST=0.8227;RSQ=0.5968;ERATE=0.0152;THETA=0.0320;AC=539;AN=2184 GT:DS:GL:BD 0.24679486 0
1 16892050 . TG T 5 PASS INDEL;BAVGPOST=0.998;BRSQ=0.547;LDAF=0.0036;AVGPOST=0.9956;RSQ=0.4901;ERATE=0.0007;THETA=0.0158;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16897642 . T TG 51 PASS INDEL;BAVGPOST=0.995;BRSQ=0.151;LDAF=0.0230;AVGPOST=0.9566;RSQ=0.1840;ERATE=0.0030;THETA=0.0336;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16897730 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.838;BRSQ=0.363;LDAF=0.1473;AVGPOST=0.8462;RSQ=0.4609;ERATE=0.0111;THETA=0.0282;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 16897894 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.731;BRSQ=0.385;LDAF=0.4140;AVGPOST=0.7498;RSQ=0.4611;ERATE=0.0275;THETA=0.0153;AC=771;AN=2184 GT:DS:GL:BD 0.35302198 0
1 16899626 . CACA C 420 PASS INDEL;BAVGPOST=0.980;BRSQ=0.358;LDAF=0.0172;AVGPOST=0.9780;RSQ=0.4646;ERATE=0.0016;THETA=0.0363;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 16900360 rs71254020 C CA 430 PASS INDEL;BAVGPOST=0.399;BRSQ=0.041;LDAF=0.3493;AVGPOST=0.5664;RSQ=0.1607;ERATE=0.0119;THETA=0.0300;AC=345;AN=2184 GT:DS:GL:BD 0.15796703 0
1 16900524 . CTG C 1975 PASS INDEL;BAVGPOST=0.991;BRSQ=0.826;LDAF=0.0189;AVGPOST=0.9925;RSQ=0.8268;ERATE=0.0005;THETA=0.0311;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 16903150 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.967;BRSQ=0.721;LDAF=0.9388;AVGPOST=0.9676;RSQ=0.7819;ERATE=0.0012;THETA=0.0216;AC=2075;AN=2184 GT:DS:GL:BD 0.95009160 1
1 16903779 . GC G 44 PASS INDEL;BAVGPOST=0.999;BRSQ=0.593;LDAF=0.0031;AVGPOST=0.9947;RSQ=0.2712;ERATE=0.0009;THETA=0.0194;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16903912 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.874;BRSQ=0.739;LDAF=0.6279;AVGPOST=0.8644;RSQ=0.7700;ERATE=0.0149;THETA=0.0212;AC=1423;AN=2184 GT:DS:GL:BD 0.65155679 1
1 16905960 . C CAGG 472 PASS INDEL;BAVGPOST=0.985;BRSQ=0.761;LDAF=0.0318;AVGPOST=0.9794;RSQ=0.7112;ERATE=0.0006;THETA=0.0156;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 16905961 rs56033858 A AG 1023 PASS INDEL;BAVGPOST=0.985;BRSQ=0.763;LDAF=0.0345;AVGPOST=0.9798;RSQ=0.7394;ERATE=0.0026;THETA=0.0355;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 16905978 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.939;BRSQ=0.866;LDAF=0.6583;AVGPOST=0.9455;RSQ=0.8834;ERATE=0.0040;THETA=0.0048;AC=1450;AN=2184 GT:DS:GL:BD 0.66391939 1
1 16906779 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.469;LDAF=0.0033;AVGPOST=0.9952;RSQ=0.3698;ERATE=0.0010;THETA=0.0069;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16906802 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.940;BRSQ=0.521;LDAF=0.0836;AVGPOST=0.9144;RSQ=0.5295;ERATE=0.0108;THETA=0.0099;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 16906808 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.873;BRSQ=0.753;LDAF=0.6693;AVGPOST=0.8858;RSQ=0.8056;ERATE=0.0053;THETA=0.0043;AC=1507;AN=2184 GT:DS:GL:BD 0.69001830 1
1 16908401 . A AGACT 1301 PASS INDEL;BAVGPOST=0.998;BRSQ=0.893;LDAF=0.0069;AVGPOST=0.9988;RSQ=0.9193;ERATE=0.0006;THETA=0.0075;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 16909002 . TG T 5046 PASS INDEL;BAVGPOST=0.882;BRSQ=0.451;LDAF=0.1528;AVGPOST=0.8729;RSQ=0.5560;ERATE=0.0088;THETA=0.0085;AC=214;AN=2184 GT:DS:GL:BD 0.09798535 0
1 16909376 . GT G 13798 PASS INDEL;BAVGPOST=0.910;BRSQ=0.693;LDAF=0.2229;AVGPOST=0.9011;RSQ=0.7342;ERATE=0.0141;THETA=0.0044;AC=402;AN=2184 GT:DS:GL:BD 0.18406594 0
1 16909406 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.932;BRSQ=0.750;LDAF=0.1811;AVGPOST=0.9284;RSQ=0.7968;ERATE=0.0266;THETA=0.0127;AC=352;AN=2184 GT:DS:GL:BD 0.16117217 0
1 16909617 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.867;LDAF=0.0295;AVGPOST=0.9897;RSQ=0.8527;ERATE=0.0007;THETA=0.0006;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 16909651 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.859;BRSQ=0.676;LDAF=0.2779;AVGPOST=0.8581;RSQ=0.7290;ERATE=0.0060;THETA=0.0085;AC=549;AN=2184 GT:DS:GL:BD 0.25137362 0
1 16909800 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.956;BRSQ=0.744;LDAF=0.0897;AVGPOST=0.9573;RSQ=0.7899;ERATE=0.0033;THETA=0.0068;AC=176;AN=2184 GT:DS:GL:BD 0.08058608 0
1 16909820 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.875;BRSQ=0.787;LDAF=0.5680;AVGPOST=0.8920;RSQ=0.8419;ERATE=0.0032;THETA=0.0119;AC=1242;AN=2184 GT:DS:GL:BD 0.56868130 1
1 16911776 . AC A 187 PASS INDEL;BAVGPOST=0.988;BRSQ=0.195;LDAF=0.0064;AVGPOST=0.9899;RSQ=0.2853;ERATE=0.0007;THETA=0.0104;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 16912459 . AC A 98 PASS INDEL;BAVGPOST=0.998;BRSQ=0.297;LDAF=0.0108;AVGPOST=0.9829;RSQ=0.3202;ERATE=0.0013;THETA=0.0107;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16912693 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.860;LDAF=0.0046;AVGPOST=0.9972;RSQ=0.7621;ERATE=0.0021;THETA=0.0088;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16912698 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.738;LDAF=0.0046;AVGPOST=0.9971;RSQ=0.7642;ERATE=0.0005;THETA=0.0056;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16914922 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.913;BRSQ=0.767;LDAF=0.6669;AVGPOST=0.9243;RSQ=0.8196;ERATE=0.0015;THETA=0.0094;AC=1454;AN=2184 GT:DS:GL:BD 0.66575092 1
1 16914974 . AC A 8375 PASS INDEL;BAVGPOST=0.944;BRSQ=0.739;LDAF=0.1185;AVGPOST=0.9433;RSQ=0.7775;ERATE=0.0048;THETA=0.0090;AC=209;AN=2184 GT:DS:GL:BD 0.09569597 0
1 16916335 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.483;LDAF=0.0092;AVGPOST=0.9862;RSQ=0.4138;ERATE=0.0023;THETA=0.0132;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16916501 . G GA 273 PASS INDEL;BAVGPOST=0.967;BRSQ=0.443;LDAF=0.0219;AVGPOST=0.9766;RSQ=0.5691;ERATE=0.0015;THETA=0.0149;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 16916870 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.940;BRSQ=0.849;LDAF=0.7231;AVGPOST=0.9396;RSQ=0.8677;ERATE=0.0017;THETA=0.0221;AC=1590;AN=2184 GT:DS:GL:BD 0.72802198 1
1 16917902 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.830;BRSQ=0.528;LDAF=0.3079;AVGPOST=0.8420;RSQ=0.5982;ERATE=0.0383;THETA=0.0192;AC=562;AN=2184 GT:DS:GL:BD 0.25732601 0
1 16917927 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.911;BRSQ=0.783;LDAF=0.6189;AVGPOST=0.9181;RSQ=0.8201;ERATE=0.0043;THETA=0.0105;AC=1378;AN=2184 GT:DS:GL:BD 0.63095236 1
1 16921340 . CA C 998 PASS INDEL;BAVGPOST=0.993;BRSQ=0.833;LDAF=0.0178;AVGPOST=0.9923;RSQ=0.8242;ERATE=0.0007;THETA=0.0141;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 16926227 . A AT 1239 PASS INDEL;BAVGPOST=0.991;BRSQ=0.836;LDAF=0.0210;AVGPOST=0.9919;RSQ=0.8330;ERATE=0.0009;THETA=0.0044;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 16926318 rs3981779 T TTTTA 144677 PASS INDEL;BAVGPOST=0.937;BRSQ=0.823;LDAF=0.7461;AVGPOST=0.9344;RSQ=0.8320;ERATE=0.0064;THETA=0.0314;AC=1642;AN=2184 GT:DS:GL:BD 0.75183153 1
1 16928054 . AG A 90 PASS INDEL;BAVGPOST=0.988;BRSQ=0.254;LDAF=0.0207;AVGPOST=0.9636;RSQ=0.2250;ERATE=0.0022;THETA=0.0133;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16928449 . CAAG C 307 PASS INDEL;BAVGPOST=0.999;BRSQ=0.851;LDAF=0.0050;AVGPOST=0.9984;RSQ=0.8684;ERATE=0.0012;THETA=0.0151;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 16928662 . T TA 1772 PASS INDEL;BAVGPOST=0.989;BRSQ=0.697;LDAF=0.0209;AVGPOST=0.9855;RSQ=0.6827;ERATE=0.0027;THETA=0.0215;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 16933456 . AG A 345 PASS INDEL;BAVGPOST=0.998;BRSQ=0.901;LDAF=0.0085;AVGPOST=0.9984;RSQ=0.9186;ERATE=0.0031;THETA=0.0124;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 16936272 . AT A 220 PASS INDEL;BAVGPOST=0.998;BRSQ=0.739;LDAF=0.0044;AVGPOST=0.9967;RSQ=0.6474;ERATE=0.0022;THETA=0.0341;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16937146 . GA G 482 PASS INDEL;BAVGPOST=0.972;BRSQ=0.389;LDAF=0.0250;AVGPOST=0.9676;RSQ=0.4103;ERATE=0.0039;THETA=0.0176;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 16937362 rs63189863 CA C 10332 PASS INDEL;BAVGPOST=0.934;BRSQ=0.802;LDAF=0.1797;AVGPOST=0.9476;RSQ=0.8337;ERATE=0.0027;THETA=0.0306;AC=369;AN=2184 GT:DS:GL:BD 0.16895604 0
1 16938435 . TA T 5249 PASS INDEL;BAVGPOST=0.969;BRSQ=0.669;LDAF=0.0535;AVGPOST=0.9670;RSQ=0.7151;ERATE=0.0058;THETA=0.0195;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 16939192 . A AG 1499 PASS INDEL;BAVGPOST=0.993;BRSQ=0.659;LDAF=0.0122;AVGPOST=0.9912;RSQ=0.6795;ERATE=0.0015;THETA=0.0352;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 16939687 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.904;BRSQ=0.678;LDAF=0.2300;AVGPOST=0.8946;RSQ=0.7099;ERATE=0.0026;THETA=0.0039;AC=429;AN=2184 GT:DS:GL:BD 0.19642857 0
1 16939705 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.896;BRSQ=0.646;LDAF=0.2123;AVGPOST=0.8912;RSQ=0.6860;ERATE=0.0028;THETA=0.0179;AC=400;AN=2184 GT:DS:GL:BD 0.18315019 0
1 16939717 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.772;BRSQ=0.397;LDAF=0.5769;AVGPOST=0.7528;RSQ=0.4464;ERATE=0.0299;THETA=0.0198;AC=1294;AN=2184 GT:DS:GL:BD 0.59249085 1
1 16939721 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.557;LDAF=0.0054;AVGPOST=0.9942;RSQ=0.5760;ERATE=0.0005;THETA=0.0255;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16939758 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.425;LDAF=0.0081;AVGPOST=0.9888;RSQ=0.4216;ERATE=0.0014;THETA=0.0243;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16939840 . A AC 1447 PASS INDEL;BAVGPOST=0.961;BRSQ=0.642;LDAF=0.0499;AVGPOST=0.9628;RSQ=0.6942;ERATE=0.0043;THETA=0.0153;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 16939909 . CA C 883 PASS INDEL;BAVGPOST=0.957;BRSQ=0.547;LDAF=0.0607;AVGPOST=0.9407;RSQ=0.5321;ERATE=0.0163;THETA=0.0155;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 16939997 rs79338600 AC A 7245 PASS INDEL;BAVGPOST=0.919;BRSQ=0.660;LDAF=0.1724;AVGPOST=0.9118;RSQ=0.7089;ERATE=0.0154;THETA=0.0132;AC=297;AN=2184 GT:DS:GL:BD 0.13598901 0
1 16940140 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.934;BRSQ=0.727;LDAF=0.1121;AVGPOST=0.9429;RSQ=0.7574;ERATE=0.0030;THETA=0.0202;AC=204;AN=2184 GT:DS:GL:BD 0.09340660 0
1 16941590 . AAG A 185 PASS INDEL;BAVGPOST=0.998;BRSQ=0.663;LDAF=0.0046;AVGPOST=0.9955;RSQ=0.6071;ERATE=0.0005;THETA=0.0076;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16942846 . CAT C 785 PASS INDEL;BAVGPOST=0.987;BRSQ=0.480;LDAF=0.0251;AVGPOST=0.9642;RSQ=0.3568;ERATE=0.0044;THETA=0.0149;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 16944341 rs56281593 CTG C 154 PASS INDEL;BAVGPOST=0.998;BRSQ=0.693;LDAF=0.0043;AVGPOST=0.9967;RSQ=0.6040;ERATE=0.0012;THETA=0.0200;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16945144 rs71270820 C CA 1356 PASS INDEL;BAVGPOST=0.991;BRSQ=0.714;LDAF=0.0187;AVGPOST=0.9866;RSQ=0.6788;ERATE=0.0007;THETA=0.0191;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 16947281 rs5772695 TC T 15749 PASS INDEL;BAVGPOST=0.943;BRSQ=0.789;LDAF=0.2646;AVGPOST=0.9417;RSQ=0.8268;ERATE=0.0294;THETA=0.0039;AC=532;AN=2184 GT:DS:GL:BD 0.24358974 0
1 16948307 . TC T 470 PASS INDEL;BAVGPOST=0.983;BRSQ=0.340;LDAF=0.0217;AVGPOST=0.9702;RSQ=0.3952;ERATE=0.0023;THETA=0.0255;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 16948523 . TGCA T 1574 PASS INDEL;BAVGPOST=0.992;BRSQ=0.728;LDAF=0.0167;AVGPOST=0.9891;RSQ=0.7048;ERATE=0.0016;THETA=0.0152;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 16953246 . CCT C 1780 PASS INDEL;BAVGPOST=0.991;BRSQ=0.849;LDAF=0.0192;AVGPOST=0.9952;RSQ=0.9000;ERATE=0.0006;THETA=0.0245;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 16954346 . TC T 82 PASS INDEL;BAVGPOST=0.993;BRSQ=0.348;LDAF=0.0082;AVGPOST=0.9884;RSQ=0.3596;ERATE=0.0007;THETA=0.0132;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 16954709 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.665;LDAF=0.9613;AVGPOST=0.9761;RSQ=0.7487;ERATE=0.0010;THETA=0.0243;AC=2115;AN=2184 GT:DS:GL:BD 0.96840662 1
1 16955716 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.667;LDAF=0.0310;AVGPOST=0.9796;RSQ=0.7418;ERATE=0.0008;THETA=0.0234;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 16955839 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16956689 rs113340289 GC G 101 PASS INDEL;BAVGPOST=0.999;BRSQ=0.792;LDAF=0.0023;AVGPOST=0.9982;RSQ=0.6650;ERATE=0.0005;THETA=0.0139;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 16956888 . CCAGA C 1073 PASS INDEL;BAVGPOST=0.997;BRSQ=0.864;LDAF=0.0120;AVGPOST=0.9961;RSQ=0.8710;ERATE=0.0026;THETA=0.0124;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 16957179 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.941;BRSQ=0.824;LDAF=0.1848;AVGPOST=0.9511;RSQ=0.8457;ERATE=0.0063;THETA=0.0157;AC=372;AN=2184 GT:DS:GL:BD 0.17032968 0
1 16957287 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.942;BRSQ=0.727;LDAF=0.1383;AVGPOST=0.9359;RSQ=0.7600;ERATE=0.0147;THETA=0.0089;AC=253;AN=2184 GT:DS:GL:BD 0.11584249 0
1 16957305 rs33996121 G GC 2694 PASS INDEL;BAVGPOST=0.893;BRSQ=0.513;LDAF=0.1427;AVGPOST=0.8832;RSQ=0.5717;ERATE=0.0220;THETA=0.0080;AC=192;AN=2184 GT:DS:GL:BD 0.08791209 0
1 16957337 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.959;BRSQ=0.745;LDAF=0.0909;AVGPOST=0.9558;RSQ=0.7778;ERATE=0.0028;THETA=0.0257;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 16957414 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.954;BRSQ=0.852;LDAF=0.1845;AVGPOST=0.9594;RSQ=0.8734;ERATE=0.0039;THETA=0.0293;AC=385;AN=2184 GT:DS:GL:BD 0.17628205 0
1 16957446 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.952;BRSQ=0.789;LDAF=0.8687;AVGPOST=0.9530;RSQ=0.8244;ERATE=0.0046;THETA=0.0115;AC=1913;AN=2184 GT:DS:GL:BD 0.87591577 1
1 16957539 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.659;LDAF=0.0005;AVGPOST=0.9994;RSQ=0.4767;ERATE=0.0004;THETA=0.0233;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16957610 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.957;BRSQ=0.758;LDAF=0.1048;AVGPOST=0.9557;RSQ=0.7980;ERATE=0.0059;THETA=0.0241;AC=205;AN=2184 GT:DS:GL:BD 0.09386447 0
1 16959823 . T TC 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5429;ERATE=0.0004;THETA=0.0266;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16961337 . A AG 1066 PASS INDEL;BAVGPOST=0.988;BRSQ=0.784;LDAF=0.0200;AVGPOST=0.9883;RSQ=0.7614;ERATE=0.0009;THETA=0.0156;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 16961870 . TA T 157 PASS INDEL;BAVGPOST=0.998;BRSQ=0.804;LDAF=0.0042;AVGPOST=0.9980;RSQ=0.8253;ERATE=0.0006;THETA=0.0141;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 16966946 . AAGAC A 290 PASS INDEL;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0022;AVGPOST=0.9996;RSQ=0.9318;ERATE=0.0004;THETA=0.0023;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 16967325 . C CT 694 PASS INDEL;BAVGPOST=0.995;BRSQ=0.846;LDAF=0.0137;AVGPOST=0.9926;RSQ=0.7718;ERATE=0.0014;THETA=0.0361;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 16968880 . GA G 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7127;ERATE=0.0003;THETA=0.0134;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16970870 rs56378906 G GC 10471 PASS INDEL;BAVGPOST=0.952;BRSQ=0.798;LDAF=0.1277;AVGPOST=0.9521;RSQ=0.8098;ERATE=0.0028;THETA=0.0237;AC=240;AN=2184 GT:DS:GL:BD 0.10989011 0
1 16971139 . AC A 618 PASS INDEL;BAVGPOST=0.989;BRSQ=0.668;LDAF=0.0173;AVGPOST=0.9903;RSQ=0.7669;ERATE=0.0016;THETA=0.0221;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 16972591 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0004;THETA=0.0264;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16972677 . TGG T 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0003;THETA=0.0293;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16972831 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0270;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16972995 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.754;LDAF=0.0248;AVGPOST=0.9856;RSQ=0.7761;ERATE=0.0061;THETA=0.0078;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 16973009 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.856;LDAF=0.0848;AVGPOST=0.9796;RSQ=0.8958;ERATE=0.0159;THETA=0.0164;AC=172;AN=2184 GT:DS:GL:BD 0.07875458 0
1 16974627 . CG C 211 PASS INDEL;BAVGPOST=0.996;BRSQ=0.654;LDAF=0.0082;AVGPOST=0.9928;RSQ=0.6019;ERATE=0.0013;THETA=0.0325;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 16974745 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.832;BRSQ=0.496;LDAF=0.2289;AVGPOST=0.8537;RSQ=0.5930;ERATE=0.0100;THETA=0.0305;AC=379;AN=2184 GT:DS:GL:BD 0.17353480 0
1 16974757 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.565;LDAF=0.0028;AVGPOST=0.9962;RSQ=0.4445;ERATE=0.0010;THETA=0.0322;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16974758 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.837;BRSQ=0.587;LDAF=0.4153;AVGPOST=0.8259;RSQ=0.6482;ERATE=0.0194;THETA=0.0170;AC=877;AN=2184 GT:DS:GL:BD 0.40155679 0
1 16974786 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.816;BRSQ=0.465;LDAF=0.3956;AVGPOST=0.8130;RSQ=0.5420;ERATE=0.0119;THETA=0.0146;AC=777;AN=2184 GT:DS:GL:BD 0.35576922 0
1 16974972 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.891;BRSQ=0.679;LDAF=0.3327;AVGPOST=0.8952;RSQ=0.7490;ERATE=0.0199;THETA=0.0429;AC=694;AN=2184 GT:DS:GL:BD 0.31776556 0
1 16975994 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.863;BRSQ=0.646;LDAF=0.2624;AVGPOST=0.8776;RSQ=0.7247;ERATE=0.0144;THETA=0.0281;AC=518;AN=2184 GT:DS:GL:BD 0.23717949 0
1 16976096 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.807;LDAF=0.0927;AVGPOST=0.9621;RSQ=0.8154;ERATE=0.0080;THETA=0.0252;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 16976193 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.893;BRSQ=0.751;LDAF=0.3856;AVGPOST=0.9015;RSQ=0.8062;ERATE=0.0269;THETA=0.0195;AC=835;AN=2184 GT:DS:GL:BD 0.38232601 0
1 16976961 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.817;LDAF=0.0935;AVGPOST=0.9678;RSQ=0.8487;ERATE=0.0088;THETA=0.0168;AC=186;AN=2184 GT:DS:GL:BD 0.08516484 0
1 16977974 . CT C 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0233;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16978368 . GC G 164 PASS INDEL;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8207;ERATE=0.0005;THETA=0.0116;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 16979010 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.666;LDAF=0.0290;AVGPOST=0.9829;RSQ=0.7394;ERATE=0.0014;THETA=0.0114;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 16979035 . T TA 540 PASS INDEL;BAVGPOST=0.995;BRSQ=0.601;LDAF=0.0061;AVGPOST=0.9953;RSQ=0.6602;ERATE=0.0014;THETA=0.0097;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 16979038 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.515;LDAF=0.0018;AVGPOST=0.9971;RSQ=0.2578;ERATE=0.0006;THETA=0.0184;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 16979063 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.904;BRSQ=0.700;LDAF=0.1869;AVGPOST=0.8962;RSQ=0.7477;ERATE=0.0032;THETA=0.0067;AC=333;AN=2184 GT:DS:GL:BD 0.15247253 0
1 16979397 . CAT C 4260 PASS INDEL;BAVGPOST=0.993;BRSQ=0.877;LDAF=0.0242;AVGPOST=0.9947;RSQ=0.9033;ERATE=0.0006;THETA=0.0212;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 16982681 . ACT A 4853 PASS INDEL;BAVGPOST=0.921;BRSQ=0.565;LDAF=0.1213;AVGPOST=0.9127;RSQ=0.6173;ERATE=0.0123;THETA=0.0069;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 16983301 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.925;BRSQ=0.644;LDAF=0.1559;AVGPOST=0.8609;RSQ=0.5539;ERATE=0.0095;THETA=0.0173;AC=201;AN=2184 GT:DS:GL:BD 0.09203297 0
1 16983979 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.943;LDAF=0.0641;AVGPOST=0.9936;RSQ=0.9589;ERATE=0.0005;THETA=0.0089;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 16984726 . CT C 16 PASS INDEL;BAVGPOST=0.980;BRSQ=0.088;LDAF=0.0182;AVGPOST=0.9665;RSQ=0.1539;ERATE=0.0037;THETA=0.0063;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16984837 . GA G 2101 PASS INDEL;BAVGPOST=0.695;BRSQ=0.155;LDAF=0.2619;AVGPOST=0.6528;RSQ=0.2309;ERATE=0.0199;THETA=0.0267;AC=195;AN=2184 GT:DS:GL:BD 0.08928572 0
1 16985416 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.934;BRSQ=0.750;LDAF=0.1497;AVGPOST=0.9213;RSQ=0.7610;ERATE=0.0065;THETA=0.0224;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 16986105 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.745;BRSQ=0.018;LDAF=0.8534;AVGPOST=0.7453;RSQ=0.1328;ERATE=0.0037;THETA=0.0086;AC=2150;AN=2184 GT:DS:GL:BD 0.98443222 1
1 16988166 . GT G 289 PASS INDEL;BAVGPOST=0.703;BRSQ=0.121;LDAF=0.2296;AVGPOST=0.6757;RSQ=0.2189;ERATE=0.0171;THETA=0.0231;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 16989475 . T TGCAC 116 PASS INDEL;BAVGPOST=0.786;BRSQ=0.005;LDAF=0.0650;AVGPOST=0.8769;RSQ=0.1039;ERATE=0.0042;THETA=0.0128;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 16991639 . AG A 112 PASS INDEL;BAVGPOST=0.764;BRSQ=0.024;LDAF=0.1755;AVGPOST=0.7023;RSQ=0.1177;ERATE=0.0152;THETA=0.0209;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 16992629 . C CT 238 PASS INDEL;BAVGPOST=0.794;BRSQ=0.035;LDAF=0.1564;AVGPOST=0.7356;RSQ=0.1332;ERATE=0.0121;THETA=0.0216;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 16994954 . A AAC 164 PASS INDEL;BAVGPOST=0.817;BRSQ=0.027;LDAF=0.1140;AVGPOST=0.7986;RSQ=0.1268;ERATE=0.0075;THETA=0.0181;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 16998705 . TACACACCAAA T 1501 PASS INDEL;BAVGPOST=0.618;BRSQ=0.020;LDAF=0.1963;AVGPOST=0.6819;RSQ=0.1227;ERATE=0.0187;THETA=0.0101;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 16999045 . CCCCATG C 273 PASS INDEL;BAVGPOST=0.864;BRSQ=0.043;LDAF=0.1547;AVGPOST=0.7404;RSQ=0.1462;ERATE=0.0130;THETA=0.0057;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 17000931 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.947;LDAF=0.0302;AVGPOST=0.9927;RSQ=0.9141;ERATE=0.0009;THETA=0.0082;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 17000935 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4899;ERATE=0.0005;THETA=0.0093;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17000989 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.924;LDAF=0.0258;AVGPOST=0.9900;RSQ=0.8614;ERATE=0.0007;THETA=0.0123;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 17001214 . C CA 1164 PASS INDEL;BAVGPOST=0.786;BRSQ=0.285;LDAF=0.2204;AVGPOST=0.7351;RSQ=0.3277;ERATE=0.0241;THETA=0.0068;AC=217;AN=2184 GT:DS:GL:BD 0.09935898 0
1 17001226 . A AG 339 PASS INDEL;BAVGPOST=0.997;BRSQ=0.670;LDAF=0.0068;AVGPOST=0.9923;RSQ=0.5952;ERATE=0.0006;THETA=0.0122;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 17001255 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.898;LDAF=0.1073;AVGPOST=0.9755;RSQ=0.9044;ERATE=0.0050;THETA=0.0097;AC=221;AN=2184 GT:DS:GL:BD 0.10119048 0
1 17002058 rs3982021 TCAG T 1126 PASS INDEL;BAVGPOST=0.883;BRSQ=0.378;LDAF=0.1237;AVGPOST=0.8555;RSQ=0.4262;ERATE=0.0141;THETA=0.0135;AC=136;AN=2184 GT:DS:GL:BD 0.06227106 0
1 17002091 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.899;BRSQ=0.632;LDAF=0.1585;AVGPOST=0.8988;RSQ=0.6750;ERATE=0.0196;THETA=0.0029;AC=276;AN=2184 GT:DS:GL:BD 0.12637363 0
1 17002110 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.936;LDAF=0.0264;AVGPOST=0.9958;RSQ=0.9445;ERATE=0.0004;THETA=0.0075;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 17002211 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.850;BRSQ=0.532;LDAF=0.2315;AVGPOST=0.8334;RSQ=0.5835;ERATE=0.0223;THETA=0.0035;AC=362;AN=2184 GT:DS:GL:BD 0.16575092 0
1 17002241 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.643;LDAF=0.0077;AVGPOST=0.9926;RSQ=0.6037;ERATE=0.0006;THETA=0.0151;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 17002250 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.775;LDAF=0.0559;AVGPOST=0.9769;RSQ=0.8339;ERATE=0.0012;THETA=0.0243;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 17002323 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.832;BRSQ=0.724;LDAF=0.3394;AVGPOST=0.7713;RSQ=0.6468;ERATE=0.0015;THETA=0.0049;AC=690;AN=2184 GT:DS:GL:BD 0.31593406 0
1 17002619 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.734;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6288;ERATE=0.0004;THETA=0.0106;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17002629 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.742;LDAF=0.0455;AVGPOST=0.9710;RSQ=0.7417;ERATE=0.0067;THETA=0.0185;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 17002894 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.789;LDAF=0.0474;AVGPOST=0.9808;RSQ=0.8350;ERATE=0.0010;THETA=0.0330;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 17002971 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0329;AVGPOST=0.9963;RSQ=0.9633;ERATE=0.0004;THETA=0.0118;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 17002996 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.792;LDAF=0.0134;AVGPOST=0.9941;RSQ=0.8250;ERATE=0.0004;THETA=0.0261;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 17002997 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7113;ERATE=0.0003;THETA=0.0111;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17003046 . T TA 122 PASS INDEL;BAVGPOST=0.994;BRSQ=0.645;LDAF=0.0114;AVGPOST=0.9884;RSQ=0.5371;ERATE=0.0037;THETA=0.0208;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 17003056 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.701;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5708;ERATE=0.0004;THETA=0.0339;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17003064 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.646;LDAF=0.0031;AVGPOST=0.9982;RSQ=0.7597;ERATE=0.0003;THETA=0.0286;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17003078 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0057;AVGPOST=0.9988;RSQ=0.9116;ERATE=0.0004;THETA=0.0071;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 17003146 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5655;ERATE=0.0003;THETA=0.0160;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17003178 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.693;LDAF=0.0039;AVGPOST=0.9957;RSQ=0.4934;ERATE=0.0018;THETA=0.0336;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17003200 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0272;AVGPOST=0.9976;RSQ=0.9692;ERATE=0.0003;THETA=0.0137;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 17003215 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.986;LDAF=0.1945;AVGPOST=0.9788;RSQ=0.9548;ERATE=0.0004;THETA=0.0047;AC=426;AN=2184 GT:DS:GL:BD 0.19505495 0
1 17003221 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.921;LDAF=0.0212;AVGPOST=0.9970;RSQ=0.9353;ERATE=0.0004;THETA=0.0008;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 17003262 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5794;ERATE=0.0003;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17003268 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.735;LDAF=0.0034;AVGPOST=0.9979;RSQ=0.7395;ERATE=0.0008;THETA=0.0066;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 17003316 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0339;AVGPOST=0.9976;RSQ=0.9769;ERATE=0.0005;THETA=0.0059;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 17003371 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.798;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7375;ERATE=0.0004;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17003437 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5891;ERATE=0.0004;THETA=0.0024;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17003463 . GA G 280 PASS INDEL;BAVGPOST=0.998;BRSQ=0.797;LDAF=0.0041;AVGPOST=0.9979;RSQ=0.7652;ERATE=0.0003;THETA=0.0012;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 17003468 . CACT C 234 PASS INDEL;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6798;ERATE=0.0003;THETA=0.0063;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17003509 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0038;AVGPOST=0.9980;RSQ=0.8110;ERATE=0.0004;THETA=0.0020;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 17003534 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.948;LDAF=0.3100;AVGPOST=0.9698;RSQ=0.9502;ERATE=0.0007;THETA=0.0013;AC=679;AN=2184 GT:DS:GL:BD 0.31089744 0
1 17003554 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0339;AVGPOST=0.9989;RSQ=0.9902;ERATE=0.0003;THETA=0.0036;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 17003562 . ACTT A 71 PASS INDEL;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0018;AVGPOST=0.9995;RSQ=0.8863;ERATE=0.0003;THETA=0.0022;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17003613 . A AT 51 PASS INDEL;BAVGPOST=0.997;BRSQ=0.731;LDAF=0.0048;AVGPOST=0.9955;RSQ=0.5974;ERATE=0.0029;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 17003619 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9207;ERATE=0.0004;THETA=0.0027;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 17003792 rs67071162 C CTTT 2340 PASS INDEL;BAVGPOST=0.652;BRSQ=0.333;LDAF=0.3808;AVGPOST=0.6932;RSQ=0.4745;ERATE=0.0230;THETA=0.0031;AC=723;AN=2184 GT:DS:GL:BD 0.33104396 0
1 17003851 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.959;LDAF=0.0272;AVGPOST=0.9975;RSQ=0.9671;ERATE=0.0005;THETA=0.0008;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 17003950 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.623;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8558;ERATE=0.0004;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17003989 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.778;LDAF=0.9356;AVGPOST=0.9714;RSQ=0.8207;ERATE=0.0058;THETA=0.0003;AC=2062;AN=2184 GT:DS:GL:BD 0.94413918 1
1 17004150 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7538;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17004151 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6720;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17004186 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.955;LDAF=0.9490;AVGPOST=0.9940;RSQ=0.9518;ERATE=0.0005;THETA=0.0013;AC=2077;AN=2184 GT:DS:GL:BD 0.95100731 1
1 17004288 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.749;LDAF=0.0034;AVGPOST=0.9977;RSQ=0.6791;ERATE=0.0007;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17004403 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.941;LDAF=0.1801;AVGPOST=0.9830;RSQ=0.9594;ERATE=0.0014;THETA=0.0017;AC=393;AN=2184 GT:DS:GL:BD 0.17994505 0
1 17004436 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.880;LDAF=0.0037;AVGPOST=0.9973;RSQ=0.7475;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17004462 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0281;AVGPOST=0.9995;RSQ=0.9922;ERATE=0.0003;THETA=0.0004;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 17004532 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.802;LDAF=0.0051;AVGPOST=0.9962;RSQ=0.7156;ERATE=0.0014;THETA=0.0014;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 17004561 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0035;AVGPOST=0.9992;RSQ=0.9176;ERATE=0.0005;THETA=0.0025;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 17004642 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7792;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17004645 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.845;LDAF=0.0065;AVGPOST=0.9981;RSQ=0.8788;ERATE=0.0003;THETA=0.0017;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 17004654 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6504;ERATE=0.0004;THETA=0.0023;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17004731 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0001;AVGPOST=0.9997;RSQ=0.0664;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 17004741 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.692;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9228;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17004747 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.0059;AVGPOST=0.9992;RSQ=0.9376;ERATE=0.0004;THETA=0.0012;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 17004752 . G GA 8 PASS INDEL;BAVGPOST=0.999;BRSQ=0.555;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5062;ERATE=0.0006;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17004754 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0004;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17004757 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6112;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17004759 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5588;ERATE=0.0004;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17004761 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5289;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17004764 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.709;LDAF=0.0037;AVGPOST=0.9966;RSQ=0.6141;ERATE=0.0009;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 17004768 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.918;LDAF=0.0244;AVGPOST=0.9967;RSQ=0.9465;ERATE=0.0004;THETA=0.0009;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 17004769 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.959;LDAF=0.0320;AVGPOST=0.9978;RSQ=0.9787;ERATE=0.0003;THETA=0.0006;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 17004770 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.981;LDAF=0.5249;AVGPOST=0.9809;RSQ=0.9736;ERATE=0.0007;THETA=0.0003;AC=1151;AN=2184 GT:DS:GL:BD 0.52701467 1
1 17004785 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.967;LDAF=0.3256;AVGPOST=0.9734;RSQ=0.9584;ERATE=0.0021;THETA=0.0011;AC=706;AN=2184 GT:DS:GL:BD 0.32326007 0
1 17004786 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.845;LDAF=0.0060;AVGPOST=0.9971;RSQ=0.8016;ERATE=0.0003;THETA=0.0011;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 17004789 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.749;LDAF=0.0025;AVGPOST=0.9979;RSQ=0.6592;ERATE=0.0009;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17004797 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.927;LDAF=0.0445;AVGPOST=0.9930;RSQ=0.9469;ERATE=0.0008;THETA=0.0011;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 17004798 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5201;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17004802 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0065;AVGPOST=0.9972;RSQ=0.8239;ERATE=0.0010;THETA=0.0012;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 17004807 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.867;LDAF=0.0269;AVGPOST=0.9942;RSQ=0.9147;ERATE=0.0003;THETA=0.0006;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 17004817 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7403;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17004827 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0040;AVGPOST=0.9984;RSQ=0.8263;ERATE=0.0006;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 17004834 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.968;LDAF=0.0352;AVGPOST=0.9979;RSQ=0.9767;ERATE=0.0007;THETA=0.0008;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 17004839 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9997;RSQ=0.9781;ERATE=0.0003;THETA=0.0014;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 17004841 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.623;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5979;ERATE=0.0004;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17004842 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.739;LDAF=0.0090;AVGPOST=0.9941;RSQ=0.7322;ERATE=0.0005;THETA=0.0014;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 17004850 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1764;AVGPOST=0.9963;RSQ=0.9908;ERATE=0.0003;THETA=0.0008;AC=385;AN=2184 GT:DS:GL:BD 0.17628205 0
1 17004854 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5464;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17004866 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0313;AVGPOST=0.9977;RSQ=0.9761;ERATE=0.0004;THETA=0.0007;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 17004867 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0317;AVGPOST=0.9978;RSQ=0.9790;ERATE=0.0004;THETA=0.0007;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 17004895 . CTG C 520 PASS INDEL;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0063;AVGPOST=0.9956;RSQ=0.7409;ERATE=0.0016;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 17004905 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.790;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7075;ERATE=0.0008;THETA=0.0029;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17004921 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0033;AVGPOST=0.9974;RSQ=0.6883;ERATE=0.0005;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 17004953 . ATG A 396 PASS INDEL;BAVGPOST=0.986;BRSQ=0.719;LDAF=0.0250;AVGPOST=0.9821;RSQ=0.6877;ERATE=0.0076;THETA=0.0009;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 17004968 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.749;LDAF=0.0064;AVGPOST=0.9973;RSQ=0.8462;ERATE=0.0004;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 17005012 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0009;AVGPOST=0.9985;RSQ=0.2671;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17005014 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0073;AVGPOST=0.9979;RSQ=0.8879;ERATE=0.0006;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 17005114 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6968;ERATE=0.0003;THETA=0.0024;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17005126 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.951;LDAF=0.2053;AVGPOST=0.9774;RSQ=0.9507;ERATE=0.0036;THETA=0.0007;AC=450;AN=2184 GT:DS:GL:BD 0.20604396 0
1 17005244 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0040;AVGPOST=0.9984;RSQ=0.8575;ERATE=0.0004;THETA=0.0011;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 17005264 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.605;LDAF=0.0018;AVGPOST=0.9977;RSQ=0.5149;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17005276 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0023;AVGPOST=0.9972;RSQ=0.4624;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17005299 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.1755;AVGPOST=0.9955;RSQ=0.9887;ERATE=0.0006;THETA=0.0006;AC=384;AN=2184 GT:DS:GL:BD 0.17582418 0
1 17005315 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0009;AVGPOST=0.9988;RSQ=0.4332;ERATE=0.0005;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17005320 rs72136845 G GT 571 PASS INDEL;BAVGPOST=0.996;BRSQ=0.823;LDAF=0.0089;AVGPOST=0.9959;RSQ=0.8071;ERATE=0.0011;THETA=0.0008;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 17005428 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.964;BRSQ=0.913;LDAF=0.2486;AVGPOST=0.9432;RSQ=0.8846;ERATE=0.0282;THETA=0.0008;AC=517;AN=2184 GT:DS:GL:BD 0.23672161 0
1 17005453 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.951;LDAF=0.2287;AVGPOST=0.9815;RSQ=0.9609;ERATE=0.0034;THETA=0.0009;AC=506;AN=2184 GT:DS:GL:BD 0.23168498 0
1 17005539 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.795;LDAF=0.0107;AVGPOST=0.9938;RSQ=0.7497;ERATE=0.0009;THETA=0.0009;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 17005543 . C CA 127 PASS INDEL;BAVGPOST=0.994;BRSQ=0.735;LDAF=0.0138;AVGPOST=0.9850;RSQ=0.5447;ERATE=0.0061;THETA=0.0011;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 17005549 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0061;AVGPOST=0.9997;RSQ=0.9757;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 17005621 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.775;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7391;ERATE=0.0003;THETA=0.0018;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17005706 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.973;LDAF=0.2336;AVGPOST=0.9932;RSQ=0.9849;ERATE=0.0006;THETA=0.0005;AC=511;AN=2184 GT:DS:GL:BD 0.23397435 0
1 17005727 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0340;AVGPOST=0.9995;RSQ=0.9936;ERATE=0.0003;THETA=0.0019;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 17005747 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17005799 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6112;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17005805 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0222;AVGPOST=0.9992;RSQ=0.9866;ERATE=0.0003;THETA=0.0009;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 17005875 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.830;LDAF=0.0229;AVGPOST=0.9937;RSQ=0.8913;ERATE=0.0003;THETA=0.0008;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 17005876 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.928;LDAF=0.0459;AVGPOST=0.9937;RSQ=0.9533;ERATE=0.0003;THETA=0.0015;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 17005918 . CCTT C 248 PASS INDEL;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6392;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17005955 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5188;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17005985 . T TCA 106 PASS INDEL;BAVGPOST=0.999;BRSQ=0.832;LDAF=0.0034;AVGPOST=0.9968;RSQ=0.6281;ERATE=0.0014;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17006010 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0023;AVGPOST=0.9988;RSQ=0.7757;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17006085 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.946;LDAF=0.0313;AVGPOST=0.9969;RSQ=0.9677;ERATE=0.0005;THETA=0.0011;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 17006167 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.783;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.5152;ERATE=0.0007;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17006177 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17006197 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8799;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17006307 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0035;AVGPOST=0.9986;RSQ=0.8542;ERATE=0.0003;THETA=0.0017;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 17006351 . A AG 34 PASS INDEL;BAVGPOST=0.996;BRSQ=0.736;LDAF=0.0090;AVGPOST=0.9912;RSQ=0.5937;ERATE=0.0045;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 17006360 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1766;AVGPOST=0.9932;RSQ=0.9840;ERATE=0.0005;THETA=0.0008;AC=388;AN=2184 GT:DS:GL:BD 0.17765568 0
1 17006404 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0007;AVGPOST=0.9989;RSQ=0.3492;ERATE=0.0003;THETA=0.0010;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 17006433 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.764;LDAF=0.0305;AVGPOST=0.9847;RSQ=0.7918;ERATE=0.0006;THETA=0.0037;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 17006446 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.951;LDAF=0.4048;AVGPOST=0.9680;RSQ=0.9568;ERATE=0.0014;THETA=0.0030;AC=891;AN=2184 GT:DS:GL:BD 0.40796703 0
1 17006482 . A AC 88 PASS INDEL;BAVGPOST=0.993;BRSQ=0.644;LDAF=0.0115;AVGPOST=0.9885;RSQ=0.6265;ERATE=0.0011;THETA=0.0010;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 17006483 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.821;LDAF=0.0310;AVGPOST=0.9833;RSQ=0.7804;ERATE=0.0064;THETA=0.0022;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 17006517 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0223;AVGPOST=0.9990;RSQ=0.9832;ERATE=0.0003;THETA=0.0007;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 17006932 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.943;BRSQ=0.605;LDAF=0.8978;AVGPOST=0.8992;RSQ=0.5605;ERATE=0.0069;THETA=0.0007;AC=2039;AN=2184 GT:DS:GL:BD 0.93360806 1
1 17007049 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.921;BRSQ=0.740;LDAF=0.1785;AVGPOST=0.9237;RSQ=0.8032;ERATE=0.0009;THETA=0.0037;AC=357;AN=2184 GT:DS:GL:BD 0.16346154 0
1 17007097 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.737;LDAF=0.0046;AVGPOST=0.9964;RSQ=0.6493;ERATE=0.0007;THETA=0.0050;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 17007099 . AG A 2390 PASS INDEL;BAVGPOST=0.993;BRSQ=0.902;LDAF=0.0262;AVGPOST=0.9932;RSQ=0.9119;ERATE=0.0009;THETA=0.0008;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 17007111 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.700;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6624;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17007127 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17007760 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.659;LDAF=0.0061;AVGPOST=0.9934;RSQ=0.5681;ERATE=0.0006;THETA=0.0036;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 17007855 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.958;LDAF=0.9768;AVGPOST=0.9963;RSQ=0.9403;ERATE=0.0003;THETA=0.0053;AC=2133;AN=2184 GT:DS:GL:BD 0.97664833 1
1 17007976 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.943;BRSQ=0.744;LDAF=0.1391;AVGPOST=0.9386;RSQ=0.7775;ERATE=0.0165;THETA=0.0063;AC=269;AN=2184 GT:DS:GL:BD 0.12316850 0
1 17008248 . T TGTC 329 PASS INDEL;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0018;AVGPOST=0.9997;RSQ=0.9231;ERATE=0.0005;THETA=0.0053;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17008424 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.905;LDAF=0.0374;AVGPOST=0.9914;RSQ=0.9135;ERATE=0.0009;THETA=0.0068;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 17008451 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.979;LDAF=0.2108;AVGPOST=0.9929;RSQ=0.9822;ERATE=0.0008;THETA=0.0026;AC=461;AN=2184 GT:DS:GL:BD 0.21108058 0
1 17009604 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.934;BRSQ=0.813;LDAF=0.6043;AVGPOST=0.9216;RSQ=0.8155;ERATE=0.0195;THETA=0.0040;AC=1319;AN=2184 GT:DS:GL:BD 0.60393775 1
1 17009737 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9354;ERATE=0.0004;THETA=0.0115;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 17009812 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.946;BRSQ=0.857;LDAF=0.4292;AVGPOST=0.9322;RSQ=0.8565;ERATE=0.0131;THETA=0.0012;AC=921;AN=2184 GT:DS:GL:BD 0.42170331 0
1 17010053 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.965;BRSQ=0.910;LDAF=0.1823;AVGPOST=0.9718;RSQ=0.9320;ERATE=0.0013;THETA=0.0072;AC=401;AN=2184 GT:DS:GL:BD 0.18360806 0
1 17010369 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.786;LDAF=0.0651;AVGPOST=0.9716;RSQ=0.7970;ERATE=0.0093;THETA=0.0052;AC=123;AN=2184 GT:DS:GL:BD 0.05631868 0
1 17010784 . TAATAA T 368 PASS INDEL;BAVGPOST=0.993;BRSQ=0.595;LDAF=0.0137;AVGPOST=0.9857;RSQ=0.5633;ERATE=0.0015;THETA=0.0132;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 17010993 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.930;BRSQ=0.116;LDAF=0.9296;AVGPOST=0.8890;RSQ=0.3198;ERATE=0.0045;THETA=0.0109;AC=2108;AN=2184 GT:DS:GL:BD 0.96520144 1
1 17011218 . ATATCT A 1073 PASS INDEL;BAVGPOST=0.986;BRSQ=0.600;LDAF=0.0137;AVGPOST=0.9885;RSQ=0.6659;ERATE=0.0012;THETA=0.0049;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 17011834 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.686;LDAF=0.0139;AVGPOST=0.9887;RSQ=0.6526;ERATE=0.0038;THETA=0.0091;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 17012054 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.904;LDAF=0.0069;AVGPOST=0.9981;RSQ=0.8910;ERATE=0.0004;THETA=0.0076;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 17012110 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0110;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 17012142 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0055;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17012218 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0043;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17012241 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.8822;AVGPOST=0.9984;RSQ=0.9939;ERATE=0.0076;THETA=0.0084;AC=1926;AN=2184 GT:DS:GL:BD 0.88186812 1
1 17012702 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.947;BRSQ=0.849;LDAF=0.4895;AVGPOST=0.9436;RSQ=0.8609;ERATE=0.0215;THETA=0.0048;AC=1065;AN=2184 GT:DS:GL:BD 0.48763737 0
1 17012709 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.954;BRSQ=0.872;LDAF=0.4912;AVGPOST=0.9532;RSQ=0.8928;ERATE=0.0083;THETA=0.0061;AC=1077;AN=2184 GT:DS:GL:BD 0.49313188 0
1 17012733 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9858;ERATE=0.0003;THETA=0.0041;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 17012735 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0134;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17012757 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0056;AVGPOST=0.9994;RSQ=0.9528;ERATE=0.0008;THETA=0.0129;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 17012761 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.971;LDAF=0.1724;AVGPOST=0.9892;RSQ=0.9737;ERATE=0.0009;THETA=0.0037;AC=377;AN=2184 GT:DS:GL:BD 0.17261904 0
1 17012827 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.841;LDAF=0.0105;AVGPOST=0.9946;RSQ=0.7851;ERATE=0.0005;THETA=0.0098;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 17012886 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9267;ERATE=0.0003;THETA=0.0250;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17013135 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.972;LDAF=0.0552;AVGPOST=0.9958;RSQ=0.9709;ERATE=0.0019;THETA=0.0057;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 17013189 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.930;LDAF=0.9436;AVGPOST=0.9921;RSQ=0.9412;ERATE=0.0032;THETA=0.0055;AC=2063;AN=2184 GT:DS:GL:BD 0.94459707 1
1 17013810 rs58938355 AG A 948 PASS INDEL;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0080;AVGPOST=0.9995;RSQ=0.9734;ERATE=0.0003;THETA=0.0050;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 17013811 rs58938355 GT G 949 PASS INDEL;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0081;AVGPOST=0.9995;RSQ=0.9745;ERATE=0.0003;THETA=0.0142;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 17013916 rs67138410 GT G 2811 PASS INDEL;BAVGPOST=0.892;BRSQ=0.642;LDAF=0.1774;AVGPOST=0.8902;RSQ=0.6942;ERATE=0.0150;THETA=0.0064;AC=349;AN=2184 GT:DS:GL:BD 0.15979853 0
1 17014015 . C CA 18 PASS INDEL;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6872;ERATE=0.0003;THETA=0.0076;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17014106 . T TGA 7424 PASS INDEL;BAVGPOST=0.994;BRSQ=0.945;LDAF=0.0557;AVGPOST=0.9940;RSQ=0.9526;ERATE=0.0014;THETA=0.0099;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 17015389 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0430;AVGPOST=0.9996;RSQ=0.9956;ERATE=0.0003;THETA=0.0257;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 17015574 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.875;LDAF=0.0504;AVGPOST=0.9848;RSQ=0.8781;ERATE=0.0011;THETA=0.0143;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 17015575 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0231;AVGPOST=0.9976;RSQ=0.9600;ERATE=0.0003;THETA=0.0259;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 17015596 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.986;LDAF=0.0439;AVGPOST=0.9981;RSQ=0.9834;ERATE=0.0005;THETA=0.0099;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 17015928 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.936;BRSQ=0.783;LDAF=0.1787;AVGPOST=0.9360;RSQ=0.8108;ERATE=0.0103;THETA=0.0069;AC=358;AN=2184 GT:DS:GL:BD 0.16391942 0
1 17015929 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.916;LDAF=0.0327;AVGPOST=0.9930;RSQ=0.9224;ERATE=0.0004;THETA=0.0146;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 17015989 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.933;BRSQ=0.771;LDAF=0.1925;AVGPOST=0.9336;RSQ=0.8121;ERATE=0.0064;THETA=0.0187;AC=394;AN=2184 GT:DS:GL:BD 0.18040293 0
1 17016047 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0004;THETA=0.0252;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17016105 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.941;BRSQ=0.814;LDAF=0.1927;AVGPOST=0.9483;RSQ=0.8484;ERATE=0.0086;THETA=0.0207;AC=399;AN=2184 GT:DS:GL:BD 0.18269230 0
1 17016205 rs111252218 CG C 2530 PASS INDEL;BAVGPOST=0.989;BRSQ=0.877;LDAF=0.0344;AVGPOST=0.9886;RSQ=0.8749;ERATE=0.0008;THETA=0.0025;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 17016259 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.940;BRSQ=0.691;LDAF=0.1097;AVGPOST=0.9339;RSQ=0.7274;ERATE=0.0082;THETA=0.0070;AC=208;AN=2184 GT:DS:GL:BD 0.09523810 0
1 17016262 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.882;LDAF=0.9449;AVGPOST=0.9806;RSQ=0.8501;ERATE=0.0016;THETA=0.0189;AC=2077;AN=2184 GT:DS:GL:BD 0.95100731 1
1 17016310 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.919;LDAF=0.9568;AVGPOST=0.9902;RSQ=0.9122;ERATE=0.0004;THETA=0.0078;AC=2089;AN=2184 GT:DS:GL:BD 0.95650184 1
1 17016337 . A AC 1741 PASS INDEL;BAVGPOST=0.993;BRSQ=0.850;LDAF=0.0189;AVGPOST=0.9948;RSQ=0.8916;ERATE=0.0005;THETA=0.0060;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 17016357 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.8973;ERATE=0.0004;THETA=0.0098;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17016416 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.911;BRSQ=0.639;LDAF=0.1335;AVGPOST=0.9207;RSQ=0.7156;ERATE=0.0062;THETA=0.0127;AC=257;AN=2184 GT:DS:GL:BD 0.11767399 0
1 17016420 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.746;LDAF=0.0028;AVGPOST=0.9962;RSQ=0.4511;ERATE=0.0007;THETA=0.0168;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17016424 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.0053;AVGPOST=0.9982;RSQ=0.8458;ERATE=0.0004;THETA=0.0052;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 17016570 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.918;BRSQ=0.720;LDAF=0.1792;AVGPOST=0.9276;RSQ=0.7707;ERATE=0.0101;THETA=0.0290;AC=360;AN=2184 GT:DS:GL:BD 0.16483517 0
1 17016720 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.949;LDAF=0.0420;AVGPOST=0.9932;RSQ=0.9363;ERATE=0.0007;THETA=0.0154;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 17016909 . CAA C 162 PASS INDEL;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6936;ERATE=0.0003;THETA=0.0117;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17017621 . TAGA T 2393 PASS INDEL;BAVGPOST=0.995;BRSQ=0.882;LDAF=0.0203;AVGPOST=0.9953;RSQ=0.9141;ERATE=0.0008;THETA=0.0177;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 17018435 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.847;LDAF=0.0213;AVGPOST=0.9931;RSQ=0.8862;ERATE=0.0005;THETA=0.0130;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 17018684 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.957;BRSQ=0.811;LDAF=0.1127;AVGPOST=0.9639;RSQ=0.8477;ERATE=0.0008;THETA=0.0112;AC=232;AN=2184 GT:DS:GL:BD 0.10622711 0
1 17018917 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.894;BRSQ=0.658;LDAF=0.1997;AVGPOST=0.8876;RSQ=0.6914;ERATE=0.0050;THETA=0.0104;AC=362;AN=2184 GT:DS:GL:BD 0.16575092 0
1 17018929 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.769;BRSQ=0.443;LDAF=0.3437;AVGPOST=0.7789;RSQ=0.5277;ERATE=0.0314;THETA=0.0046;AC=647;AN=2184 GT:DS:GL:BD 0.29624543 0
1 17018935 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.816;BRSQ=0.392;LDAF=0.2273;AVGPOST=0.7946;RSQ=0.4709;ERATE=0.0178;THETA=0.0113;AC=303;AN=2184 GT:DS:GL:BD 0.13873626 0
1 17018952 rs59953955 CGGCGGGCCGGCGGGCG C 6613 PASS INDEL;BAVGPOST=0.568;BRSQ=0.173;LDAF=0.4367;AVGPOST=0.6688;RSQ=0.4475;ERATE=0.0015;THETA=0.0069;AC=941;AN=2184 GT:DS:GL:BD 0.43086082 0
1 17018956 . GGGCC G 3083 PASS INDEL;BAVGPOST=0.604;BRSQ=0.242;LDAF=0.5242;AVGPOST=0.7085;RSQ=0.5326;ERATE=0.0024;THETA=0.0073;AC=1143;AN=2184 GT:DS:GL:BD 0.52335167 1
1 17018959 rs56992409 C CG 611 PASS INDEL;BAVGPOST=0.524;BRSQ=0.115;LDAF=0.3897;AVGPOST=0.6405;RSQ=0.3504;ERATE=0.0053;THETA=0.0172;AC=769;AN=2184 GT:DS:GL:BD 0.35210621 0
1 17018968 . G GC 1743 PASS INDEL;BAVGPOST=0.685;BRSQ=0.135;LDAF=0.2468;AVGPOST=0.6955;RSQ=0.2922;ERATE=0.0223;THETA=0.0115;AC=258;AN=2184 GT:DS:GL:BD 0.11813187 0
1 17018975 rs72126374 CGGTG C 6793 PASS INDEL;BAVGPOST=0.569;BRSQ=0.173;LDAF=0.4186;AVGPOST=0.6533;RSQ=0.3634;ERATE=0.0228;THETA=0.0053;AC=783;AN=2184 GT:DS:GL:BD 0.35851648 0
1 17019182 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.958;BRSQ=0.513;LDAF=0.0400;AVGPOST=0.9756;RSQ=0.7501;ERATE=0.0015;THETA=0.0216;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 17019371 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.935;BRSQ=0.770;LDAF=0.1787;AVGPOST=0.9457;RSQ=0.8306;ERATE=0.0020;THETA=0.0159;AC=372;AN=2184 GT:DS:GL:BD 0.17032968 0
1 17019432 rs60613316 T TGC 15410 PASS INDEL;BAVGPOST=0.807;BRSQ=0.449;LDAF=0.2529;AVGPOST=0.8139;RSQ=0.5431;ERATE=0.0103;THETA=0.0114;AC=407;AN=2184 GT:DS:GL:BD 0.18635531 0
1 17019434 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.930;BRSQ=0.748;LDAF=0.1787;AVGPOST=0.9401;RSQ=0.8184;ERATE=0.0016;THETA=0.0033;AC=372;AN=2184 GT:DS:GL:BD 0.17032968 0
1 17019444 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.926;BRSQ=0.732;LDAF=0.1780;AVGPOST=0.9407;RSQ=0.8209;ERATE=0.0016;THETA=0.0035;AC=372;AN=2184 GT:DS:GL:BD 0.17032968 0
1 17019525 rs67654214 CG C 21798 PASS INDEL;BAVGPOST=0.766;BRSQ=0.406;LDAF=0.3816;AVGPOST=0.7840;RSQ=0.5211;ERATE=0.0230;THETA=0.0065;AC=754;AN=2184 GT:DS:GL:BD 0.34523809 0
1 17019569 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.917;BRSQ=0.707;LDAF=0.1785;AVGPOST=0.9331;RSQ=0.7963;ERATE=0.0019;THETA=0.0017;AC=382;AN=2184 GT:DS:GL:BD 0.17490843 0
1 17019670 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.840;LDAF=0.0210;AVGPOST=0.9947;RSQ=0.8907;ERATE=0.0006;THETA=0.0151;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 17019673 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.743;BRSQ=0.352;LDAF=0.4165;AVGPOST=0.7672;RSQ=0.4500;ERATE=0.0411;THETA=0.0117;AC=817;AN=2184 GT:DS:GL:BD 0.37408423 0
1 17019726 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.637;LDAF=0.0196;AVGPOST=0.9902;RSQ=0.7891;ERATE=0.0012;THETA=0.0016;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 17019737 rs113445120 G GGTA 66 PASS INDEL;BAVGPOST=0.998;BRSQ=0.528;LDAF=0.0052;AVGPOST=0.9924;RSQ=0.3710;ERATE=0.0015;THETA=0.0029;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17019788 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.891;BRSQ=0.600;LDAF=0.1638;AVGPOST=0.9108;RSQ=0.7174;ERATE=0.0044;THETA=0.0090;AC=337;AN=2184 GT:DS:GL:BD 0.15430403 0
1 17019802 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.753;BRSQ=0.433;LDAF=0.5662;AVGPOST=0.7872;RSQ=0.5353;ERATE=0.0126;THETA=0.0017;AC=1241;AN=2184 GT:DS:GL:BD 0.56822342 1
1 17019948 . CG C 73 PASS INDEL;BAVGPOST=0.998;BRSQ=0.374;LDAF=0.0060;AVGPOST=0.9907;RSQ=0.2853;ERATE=0.0015;THETA=0.0033;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17019967 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.892;BRSQ=0.622;LDAF=0.1829;AVGPOST=0.9254;RSQ=0.7676;ERATE=0.0015;THETA=0.0045;AC=403;AN=2184 GT:DS:GL:BD 0.18452381 0
1 17020054 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.836;BRSQ=0.384;LDAF=0.1780;AVGPOST=0.8537;RSQ=0.5628;ERATE=0.0043;THETA=0.0155;AC=290;AN=2184 GT:DS:GL:BD 0.13278389 0
1 17020163 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.901;BRSQ=0.650;LDAF=0.1823;AVGPOST=0.9348;RSQ=0.8006;ERATE=0.0011;THETA=0.0083;AC=401;AN=2184 GT:DS:GL:BD 0.18360806 0
1 17020427 rs67396868 A AT 58 PASS INDEL;BAVGPOST=0.996;BRSQ=0.655;LDAF=0.0059;AVGPOST=0.9946;RSQ=0.6232;ERATE=0.0027;THETA=0.0037;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 17020441 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.777;LDAF=0.0225;AVGPOST=0.9936;RSQ=0.8880;ERATE=0.0005;THETA=0.0036;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 17020532 . TC T 146 PASS INDEL;BAVGPOST=0.998;BRSQ=0.545;LDAF=0.0043;AVGPOST=0.9976;RSQ=0.7720;ERATE=0.0005;THETA=0.0011;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 17020658 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.889;LDAF=0.0213;AVGPOST=0.9968;RSQ=0.9401;ERATE=0.0005;THETA=0.0060;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 17020760 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.561;LDAF=0.0026;AVGPOST=0.9972;RSQ=0.4907;ERATE=0.0008;THETA=0.0101;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17020906 . CA C 123 PASS INDEL;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4758;ERATE=0.0004;THETA=0.0055;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17020916 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7038;ERATE=0.0003;THETA=0.0027;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17021486 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.891;LDAF=0.1968;AVGPOST=0.9717;RSQ=0.9149;ERATE=0.0031;THETA=0.0214;AC=422;AN=2184 GT:DS:GL:BD 0.19322345 0
1 17021502 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.836;LDAF=0.9224;AVGPOST=0.9760;RSQ=0.8716;ERATE=0.0010;THETA=0.0190;AC=2019;AN=2184 GT:DS:GL:BD 0.92445058 1
1 17021582 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.947;BRSQ=0.838;LDAF=0.2386;AVGPOST=0.9582;RSQ=0.8857;ERATE=0.0020;THETA=0.0052;AC=516;AN=2184 GT:DS:GL:BD 0.23626374 0
1 17021595 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.897;LDAF=0.2028;AVGPOST=0.9726;RSQ=0.9187;ERATE=0.0007;THETA=0.0197;AC=438;AN=2184 GT:DS:GL:BD 0.20054945 0
1 17021707 . CT C 937 PASS INDEL;BAVGPOST=0.990;BRSQ=0.707;LDAF=0.0180;AVGPOST=0.9917;RSQ=0.8221;ERATE=0.0008;THETA=0.0105;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 17021955 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.809;LDAF=0.0042;AVGPOST=0.9987;RSQ=0.8831;ERATE=0.0003;THETA=0.0101;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 17022269 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.876;LDAF=0.9582;AVGPOST=0.9905;RSQ=0.9110;ERATE=0.0006;THETA=0.0079;AC=2094;AN=2184 GT:DS:GL:BD 0.95879120 1
1 17022569 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.875;LDAF=0.9226;AVGPOST=0.9816;RSQ=0.8949;ERATE=0.0038;THETA=0.0142;AC=2021;AN=2184 GT:DS:GL:BD 0.92536628 1
1 17022746 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.890;BRSQ=0.679;LDAF=0.2354;AVGPOST=0.9104;RSQ=0.7500;ERATE=0.0103;THETA=0.0037;AC=459;AN=2184 GT:DS:GL:BD 0.21016483 0
1 17022909 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.950;BRSQ=0.833;LDAF=0.1795;AVGPOST=0.9608;RSQ=0.8784;ERATE=0.0028;THETA=0.0150;AC=387;AN=2184 GT:DS:GL:BD 0.17719780 0
1 17022952 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.899;LDAF=0.9600;AVGPOST=0.9922;RSQ=0.9263;ERATE=0.0006;THETA=0.0130;AC=2093;AN=2184 GT:DS:GL:BD 0.95833331 1
1 17023026 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0049;AVGPOST=0.9992;RSQ=0.9257;ERATE=0.0005;THETA=0.0121;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 17023126 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.924;LDAF=0.1422;AVGPOST=0.9795;RSQ=0.9316;ERATE=0.0006;THETA=0.0073;AC=303;AN=2184 GT:DS:GL:BD 0.13873626 0
1 17023173 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7345;ERATE=0.0004;THETA=0.0022;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17023184 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0034;AVGPOST=0.9979;RSQ=0.7590;ERATE=0.0016;THETA=0.0018;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 17023569 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.810;LDAF=0.9037;AVGPOST=0.9698;RSQ=0.8633;ERATE=0.0003;THETA=0.0045;AC=1970;AN=2184 GT:DS:GL:BD 0.90201467 1
1 17024167 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9998;AVGPOST=0.9997;RSQ=0.0926;ERATE=0.0003;THETA=0.0070;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 17024399 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.758;LDAF=0.0030;AVGPOST=0.9990;RSQ=0.8787;ERATE=0.0003;THETA=0.0054;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 17024409 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.808;LDAF=0.0355;AVGPOST=0.9863;RSQ=0.8476;ERATE=0.0006;THETA=0.0130;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 17024605 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0003;THETA=0.0102;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17025261 rs111978498 T TA 68492 PASS INDEL;BAVGPOST=0.875;BRSQ=0.732;LDAF=0.6186;AVGPOST=0.8984;RSQ=0.7872;ERATE=0.0258;THETA=0.0085;AC=1367;AN=2184 GT:DS:GL:BD 0.62591577 1
1 17025500 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.955;BRSQ=0.847;LDAF=0.1687;AVGPOST=0.9610;RSQ=0.8733;ERATE=0.0056;THETA=0.0110;AC=352;AN=2184 GT:DS:GL:BD 0.16117217 0
1 17025552 rs66996520 T TC 15775 PASS INDEL;BAVGPOST=0.973;BRSQ=0.900;LDAF=0.1386;AVGPOST=0.9744;RSQ=0.9114;ERATE=0.0009;THETA=0.0048;AC=303;AN=2184 GT:DS:GL:BD 0.13873626 0
1 17025690 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.738;LDAF=0.9473;AVGPOST=0.9727;RSQ=0.7796;ERATE=0.0026;THETA=0.0048;AC=2085;AN=2184 GT:DS:GL:BD 0.95467031 1
1 17025706 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.700;LDAF=0.0173;AVGPOST=0.9885;RSQ=0.7194;ERATE=0.0008;THETA=0.0017;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 17025786 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.886;LDAF=0.8863;AVGPOST=0.9708;RSQ=0.8785;ERATE=0.0022;THETA=0.0170;AC=1944;AN=2184 GT:DS:GL:BD 0.89010990 1
1 17025828 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.812;BRSQ=0.527;LDAF=0.3811;AVGPOST=0.8239;RSQ=0.5866;ERATE=0.0375;THETA=0.0138;AC=760;AN=2184 GT:DS:GL:BD 0.34798536 0
1 17025852 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.842;BRSQ=0.661;LDAF=0.6094;AVGPOST=0.8427;RSQ=0.7012;ERATE=0.0133;THETA=0.0135;AC=1349;AN=2184 GT:DS:GL:BD 0.61767399 1
1 17025992 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.766;BRSQ=0.380;LDAF=0.2686;AVGPOST=0.8159;RSQ=0.5545;ERATE=0.0013;THETA=0.0085;AC=493;AN=2184 GT:DS:GL:BD 0.22573259 0
1 17026004 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.660;BRSQ=0.279;LDAF=0.4864;AVGPOST=0.7315;RSQ=0.4605;ERATE=0.0180;THETA=0.0156;AC=1049;AN=2184 GT:DS:GL:BD 0.48031136 0
1 17026043 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.740;BRSQ=0.326;LDAF=0.3100;AVGPOST=0.7589;RSQ=0.4360;ERATE=0.0079;THETA=0.0104;AC=579;AN=2184 GT:DS:GL:BD 0.26510990 0
1 17026043 rs60794777 G GGCA 3985 PASS INDEL;BAVGPOST=0.729;BRSQ=0.311;LDAF=0.3385;AVGPOST=0.7265;RSQ=0.4045;ERATE=0.0114;THETA=0.0071;AC=621;AN=2184 GT:DS:GL:BD 0.28434065 0
1 17026087 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.796;BRSQ=0.433;LDAF=0.3971;AVGPOST=0.7947;RSQ=0.5233;ERATE=0.0143;THETA=0.0098;AC=797;AN=2184 GT:DS:GL:BD 0.36492673 0
1 17026137 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.694;LDAF=0.0347;AVGPOST=0.9819;RSQ=0.7903;ERATE=0.0009;THETA=0.0020;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 17026177 . C CA 297 PASS INDEL;BAVGPOST=0.983;BRSQ=0.390;LDAF=0.0230;AVGPOST=0.9760;RSQ=0.5585;ERATE=0.0017;THETA=0.0074;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 17026232 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.816;BRSQ=0.499;LDAF=0.3517;AVGPOST=0.8058;RSQ=0.5628;ERATE=0.0147;THETA=0.0018;AC=693;AN=2184 GT:DS:GL:BD 0.31730768 0
1 17026243 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.843;BRSQ=0.375;LDAF=0.1445;AVGPOST=0.8556;RSQ=0.5001;ERATE=0.0112;THETA=0.0083;AC=198;AN=2184 GT:DS:GL:BD 0.09065934 0
1 17026254 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.777;BRSQ=0.383;LDAF=0.2535;AVGPOST=0.7939;RSQ=0.5016;ERATE=0.0109;THETA=0.0223;AC=458;AN=2184 GT:DS:GL:BD 0.20970696 0
1 17026304 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.946;BRSQ=0.538;LDAF=0.0641;AVGPOST=0.9454;RSQ=0.6354;ERATE=0.0022;THETA=0.0179;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 17026466 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.857;LDAF=0.0268;AVGPOST=0.9912;RSQ=0.8685;ERATE=0.0008;THETA=0.0108;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 17026551 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.825;BRSQ=0.505;LDAF=0.3269;AVGPOST=0.8302;RSQ=0.5761;ERATE=0.0266;THETA=0.0077;AC=628;AN=2184 GT:DS:GL:BD 0.28754580 0
1 17026617 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.869;LDAF=0.0270;AVGPOST=0.9910;RSQ=0.8620;ERATE=0.0005;THETA=0.0188;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 17026629 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.619;LDAF=0.0149;AVGPOST=0.9872;RSQ=0.6416;ERATE=0.0031;THETA=0.0200;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 17026652 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.785;LDAF=0.0198;AVGPOST=0.9906;RSQ=0.8282;ERATE=0.0009;THETA=0.0066;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 17026755 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.911;BRSQ=0.733;LDAF=0.2153;AVGPOST=0.9182;RSQ=0.7783;ERATE=0.0054;THETA=0.0097;AC=431;AN=2184 GT:DS:GL:BD 0.19734432 0
1 17026802 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.843;BRSQ=0.629;LDAF=0.7084;AVGPOST=0.8637;RSQ=0.7083;ERATE=0.0035;THETA=0.0070;AC=1589;AN=2184 GT:DS:GL:BD 0.72756410 1
1 17026803 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.841;BRSQ=0.624;LDAF=0.7022;AVGPOST=0.8745;RSQ=0.7425;ERATE=0.0014;THETA=0.0118;AC=1563;AN=2184 GT:DS:GL:BD 0.71565932 1
1 17027062 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.911;BRSQ=0.727;LDAF=0.1790;AVGPOST=0.9294;RSQ=0.7925;ERATE=0.0020;THETA=0.0085;AC=369;AN=2184 GT:DS:GL:BD 0.16895604 0
1 17027147 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.828;LDAF=0.0047;AVGPOST=0.9979;RSQ=0.7981;ERATE=0.0005;THETA=0.0055;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 17027165 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.717;LDAF=0.0264;AVGPOST=0.9869;RSQ=0.8061;ERATE=0.0006;THETA=0.0130;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 17027257 . GC G 35 PASS INDEL;BAVGPOST=0.997;BRSQ=0.661;LDAF=0.0027;AVGPOST=0.9989;RSQ=0.8106;ERATE=0.0005;THETA=0.0114;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17027305 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.576;LDAF=0.0053;AVGPOST=0.9938;RSQ=0.4910;ERATE=0.0014;THETA=0.0024;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17027317 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.609;LDAF=0.0177;AVGPOST=0.9899;RSQ=0.7766;ERATE=0.0007;THETA=0.0084;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 17027434 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.801;LDAF=0.0079;AVGPOST=0.9971;RSQ=0.8497;ERATE=0.0003;THETA=0.0123;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 17027667 . TG T 35 PASS INDEL;BAVGPOST=1.000;BRSQ=0.695;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4489;ERATE=0.0005;THETA=0.0071;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17027959 . C CG 2181 PASS INDEL;BAVGPOST=0.957;BRSQ=0.646;LDAF=0.0835;AVGPOST=0.9336;RSQ=0.6134;ERATE=0.0245;THETA=0.0249;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 17028035 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.860;LDAF=0.1256;AVGPOST=0.9651;RSQ=0.8735;ERATE=0.0009;THETA=0.0057;AC=254;AN=2184 GT:DS:GL:BD 0.11630037 0
1 17028076 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.772;LDAF=0.0759;AVGPOST=0.9686;RSQ=0.8134;ERATE=0.0049;THETA=0.0050;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 17028090 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.950;LDAF=0.0282;AVGPOST=0.9958;RSQ=0.9397;ERATE=0.0004;THETA=0.0052;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 17028094 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.934;BRSQ=0.800;LDAF=0.1914;AVGPOST=0.9501;RSQ=0.8450;ERATE=0.0093;THETA=0.0208;AC=395;AN=2184 GT:DS:GL:BD 0.18086080 0
1 17028148 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0024;AVGPOST=0.9990;RSQ=0.8322;ERATE=0.0004;THETA=0.0116;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17028168 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.875;LDAF=0.0981;AVGPOST=0.9807;RSQ=0.9140;ERATE=0.0043;THETA=0.0104;AC=202;AN=2184 GT:DS:GL:BD 0.09249084 0
1 17028284 rs67707973 TAAGA T 75 PASS INDEL;BAVGPOST=0.999;BRSQ=0.848;LDAF=0.0037;AVGPOST=0.9982;RSQ=0.7979;ERATE=0.0023;THETA=0.0076;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 17028497 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.938;BRSQ=0.801;LDAF=0.2021;AVGPOST=0.9444;RSQ=0.8344;ERATE=0.0109;THETA=0.0126;AC=412;AN=2184 GT:DS:GL:BD 0.18864469 0
1 17028688 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.705;LDAF=0.0297;AVGPOST=0.9787;RSQ=0.7148;ERATE=0.0033;THETA=0.0157;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 17028811 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.931;BRSQ=0.707;LDAF=0.1447;AVGPOST=0.9410;RSQ=0.7895;ERATE=0.0051;THETA=0.0120;AC=291;AN=2184 GT:DS:GL:BD 0.13324176 0
1 17028875 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.926;BRSQ=0.637;LDAF=0.1249;AVGPOST=0.9267;RSQ=0.7128;ERATE=0.0059;THETA=0.0102;AC=242;AN=2184 GT:DS:GL:BD 0.11080586 0
1 17028902 . CT C 588 PASS INDEL;BAVGPOST=0.889;BRSQ=0.573;LDAF=0.1251;AVGPOST=0.8963;RSQ=0.6324;ERATE=0.0009;THETA=0.0093;AC=186;AN=2184 GT:DS:GL:BD 0.08516484 0
1 17028903 rs56359110 TC T 7374 PASS INDEL;BAVGPOST=0.856;BRSQ=0.547;LDAF=0.2245;AVGPOST=0.8255;RSQ=0.6080;ERATE=0.0139;THETA=0.0070;AC=346;AN=2184 GT:DS:GL:BD 0.15842491 0
1 17028905 . CT C 515 PASS INDEL;BAVGPOST=0.890;BRSQ=0.573;LDAF=0.1257;AVGPOST=0.8955;RSQ=0.6316;ERATE=0.0008;THETA=0.0221;AC=201;AN=2184 GT:DS:GL:BD 0.09203297 0
1 17028969 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.770;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6567;ERATE=0.0005;THETA=0.0044;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17029226 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.769;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7853;ERATE=0.0004;THETA=0.0201;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17029257 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.963;BRSQ=0.849;LDAF=0.1581;AVGPOST=0.9609;RSQ=0.8794;ERATE=0.0152;THETA=0.0092;AC=323;AN=2184 GT:DS:GL:BD 0.14789377 0
1 17029281 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.937;LDAF=0.0264;AVGPOST=0.9961;RSQ=0.9407;ERATE=0.0004;THETA=0.0093;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 17029536 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9298;ERATE=0.0004;THETA=0.0185;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 17029578 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.872;LDAF=0.0072;AVGPOST=0.9979;RSQ=0.8827;ERATE=0.0008;THETA=0.0030;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 17030803 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.886;LDAF=0.0238;AVGPOST=0.9959;RSQ=0.9330;ERATE=0.0007;THETA=0.0088;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 17030835 . G GC 15 PASS INDEL;BAVGPOST=0.999;BRSQ=0.750;LDAF=0.0019;AVGPOST=0.9982;RSQ=0.6242;ERATE=0.0005;THETA=0.0096;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17030967 . AG A 128 PASS INDEL;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6418;ERATE=0.0003;THETA=0.0067;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17031067 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.899;LDAF=0.1653;AVGPOST=0.9763;RSQ=0.9263;ERATE=0.0046;THETA=0.0044;AC=353;AN=2184 GT:DS:GL:BD 0.16163003 0
1 17031161 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.957;BRSQ=0.814;LDAF=0.1408;AVGPOST=0.9560;RSQ=0.8548;ERATE=0.0018;THETA=0.0222;AC=295;AN=2184 GT:DS:GL:BD 0.13507326 0
1 17031220 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.741;LDAF=0.0309;AVGPOST=0.9858;RSQ=0.8257;ERATE=0.0007;THETA=0.0220;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 17032436 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.821;LDAF=0.0314;AVGPOST=0.9882;RSQ=0.8501;ERATE=0.0027;THETA=0.0052;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 17033724 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.867;LDAF=0.0178;AVGPOST=0.9970;RSQ=0.9367;ERATE=0.0004;THETA=0.0205;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 17034041 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.765;BRSQ=0.412;LDAF=0.7070;AVGPOST=0.7683;RSQ=0.5032;ERATE=0.0115;THETA=0.0069;AC=1652;AN=2184 GT:DS:GL:BD 0.75641024 1
1 17034110 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.478;LDAF=0.0134;AVGPOST=0.9833;RSQ=0.4536;ERATE=0.0012;THETA=0.0079;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 17034125 rs79472512 C CAGCT 16379 PASS INDEL;BAVGPOST=0.778;BRSQ=0.368;LDAF=0.2585;AVGPOST=0.7762;RSQ=0.4670;ERATE=0.0130;THETA=0.0258;AC=396;AN=2184 GT:DS:GL:BD 0.18131869 0
1 17034129 . TG T 52 PASS INDEL;BAVGPOST=0.989;BRSQ=0.382;LDAF=0.0201;AVGPOST=0.9670;RSQ=0.2600;ERATE=0.0048;THETA=0.0171;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 17034140 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.918;BRSQ=0.507;LDAF=0.0997;AVGPOST=0.9016;RSQ=0.5459;ERATE=0.0106;THETA=0.0092;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 17034159 . CGAA C 29 PASS INDEL;BAVGPOST=0.998;BRSQ=0.361;LDAF=0.0059;AVGPOST=0.9911;RSQ=0.3238;ERATE=0.0011;THETA=0.0170;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17034167 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.897;BRSQ=0.434;LDAF=0.1172;AVGPOST=0.8764;RSQ=0.5021;ERATE=0.0139;THETA=0.0124;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 17034246 . A AG 113 PASS INDEL;BAVGPOST=0.912;BRSQ=0.195;LDAF=0.0962;AVGPOST=0.8497;RSQ=0.2728;ERATE=0.0118;THETA=0.0064;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 17034250 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.752;BRSQ=0.437;LDAF=0.5121;AVGPOST=0.7834;RSQ=0.5550;ERATE=0.0195;THETA=0.0130;AC=1121;AN=2184 GT:DS:GL:BD 0.51327837 1
1 17034268 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.820;BRSQ=0.494;LDAF=0.2196;AVGPOST=0.8513;RSQ=0.6097;ERATE=0.0048;THETA=0.0156;AC=395;AN=2184 GT:DS:GL:BD 0.18086080 0
1 17034285 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.938;BRSQ=0.729;LDAF=0.1322;AVGPOST=0.9356;RSQ=0.7608;ERATE=0.0009;THETA=0.0017;AC=244;AN=2184 GT:DS:GL:BD 0.11172161 0
1 17034297 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.938;BRSQ=0.731;LDAF=0.1331;AVGPOST=0.9359;RSQ=0.7641;ERATE=0.0015;THETA=0.0092;AC=247;AN=2184 GT:DS:GL:BD 0.11309524 0
1 17034371 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.771;LDAF=0.0208;AVGPOST=0.9881;RSQ=0.7818;ERATE=0.0008;THETA=0.0192;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 17034373 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.632;LDAF=0.0159;AVGPOST=0.9839;RSQ=0.5741;ERATE=0.0014;THETA=0.0123;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 17034434 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.739;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.5672;ERATE=0.0005;THETA=0.0112;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17034614 . A ACC 630 PASS INDEL;BAVGPOST=0.990;BRSQ=0.587;LDAF=0.0148;AVGPOST=0.9862;RSQ=0.6231;ERATE=0.0014;THETA=0.0014;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 17034618 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.678;LDAF=0.0116;AVGPOST=0.9911;RSQ=0.6866;ERATE=0.0022;THETA=0.0054;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 17034642 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.800;LDAF=0.0174;AVGPOST=0.9950;RSQ=0.8896;ERATE=0.0004;THETA=0.0048;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 17034645 . T TCC 10 PASS INDEL;BAVGPOST=0.980;BRSQ=0.186;LDAF=0.0080;AVGPOST=0.9853;RSQ=0.2270;ERATE=0.0017;THETA=0.0100;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17034728 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.837;BRSQ=0.518;LDAF=0.3292;AVGPOST=0.8354;RSQ=0.5566;ERATE=0.0243;THETA=0.0170;AC=624;AN=2184 GT:DS:GL:BD 0.28571430 0
1 17034782 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.664;LDAF=0.0177;AVGPOST=0.9867;RSQ=0.7414;ERATE=0.0006;THETA=0.0163;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 17034835 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.862;BRSQ=0.613;LDAF=0.3335;AVGPOST=0.8477;RSQ=0.6398;ERATE=0.0427;THETA=0.0261;AC=657;AN=2184 GT:DS:GL:BD 0.30082417 0
1 17034918 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.641;LDAF=0.0053;AVGPOST=0.9951;RSQ=0.6380;ERATE=0.0011;THETA=0.0141;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 17035061 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.949;BRSQ=0.757;LDAF=0.1205;AVGPOST=0.9490;RSQ=0.7978;ERATE=0.0049;THETA=0.0122;AC=232;AN=2184 GT:DS:GL:BD 0.10622711 0
1 17035236 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.956;LDAF=0.0293;AVGPOST=0.9972;RSQ=0.9642;ERATE=0.0003;THETA=0.0157;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 17035321 rs59956038 TC T 170 PASS INDEL;BAVGPOST=0.999;BRSQ=0.832;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9212;ERATE=0.0003;THETA=0.0060;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17035376 . T TCA 6160 PASS INDEL;BAVGPOST=0.996;BRSQ=0.948;LDAF=0.0316;AVGPOST=0.9947;RSQ=0.9300;ERATE=0.0009;THETA=0.0167;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 17035878 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5709;ERATE=0.0004;THETA=0.0043;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17036312 rs59197752 TC T 11228 PASS INDEL;BAVGPOST=0.937;BRSQ=0.776;LDAF=0.2077;AVGPOST=0.9394;RSQ=0.8240;ERATE=0.0127;THETA=0.0076;AC=423;AN=2184 GT:DS:GL:BD 0.19368131 0
1 17036944 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.868;LDAF=0.0069;AVGPOST=0.9977;RSQ=0.8713;ERATE=0.0007;THETA=0.0028;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 17036997 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0021;AVGPOST=0.9987;RSQ=0.7489;ERATE=0.0004;THETA=0.0043;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17037019 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.904;LDAF=0.0559;AVGPOST=0.9899;RSQ=0.9255;ERATE=0.0043;THETA=0.0036;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 17037268 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.824;LDAF=0.0156;AVGPOST=0.9935;RSQ=0.8390;ERATE=0.0007;THETA=0.0022;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 17037277 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.892;BRSQ=0.745;LDAF=0.6765;AVGPOST=0.9119;RSQ=0.7931;ERATE=0.0322;THETA=0.0084;AC=1505;AN=2184 GT:DS:GL:BD 0.68910259 1
1 17037302 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.960;BRSQ=0.810;LDAF=0.1281;AVGPOST=0.9580;RSQ=0.8385;ERATE=0.0042;THETA=0.0102;AC=261;AN=2184 GT:DS:GL:BD 0.11950549 0
1 17037346 rs68043803 T TG 10 PASS INDEL;BAVGPOST=0.999;BRSQ=0.566;LDAF=0.0020;AVGPOST=0.9968;RSQ=0.3722;ERATE=0.0006;THETA=0.0075;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17037479 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.865;LDAF=0.0070;AVGPOST=0.9977;RSQ=0.8690;ERATE=0.0004;THETA=0.0066;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 17037952 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.878;LDAF=0.1370;AVGPOST=0.9705;RSQ=0.8991;ERATE=0.0009;THETA=0.0096;AC=290;AN=2184 GT:DS:GL:BD 0.13278389 0
1 17038161 rs71812807 AAAT A 53 PASS INDEL;BAVGPOST=0.997;BRSQ=0.627;LDAF=0.0018;AVGPOST=0.9980;RSQ=0.5734;ERATE=0.0008;THETA=0.0046;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17038231 . A AC 120 PASS INDEL;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0025;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17038326 rs59855586 GA G 32704 PASS INDEL;BAVGPOST=0.967;BRSQ=0.895;LDAF=0.2907;AVGPOST=0.9694;RSQ=0.9089;ERATE=0.0125;THETA=0.0061;AC=619;AN=2184 GT:DS:GL:BD 0.28342491 0
1 17038455 rs71841759 GCCTC G 26666 PASS INDEL;BAVGPOST=0.887;BRSQ=0.657;LDAF=0.3383;AVGPOST=0.8878;RSQ=0.6981;ERATE=0.0570;THETA=0.0096;AC=667;AN=2184 GT:DS:GL:BD 0.30540293 0
1 17038581 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8602;ERATE=0.0011;THETA=0.0111;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17038731 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.830;LDAF=0.0882;AVGPOST=0.9711;RSQ=0.8481;ERATE=0.0121;THETA=0.0051;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 17038940 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6428;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17039146 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.718;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8586;ERATE=0.0003;THETA=0.0028;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17039147 . GT G 999 PASS INDEL;BAVGPOST=0.992;BRSQ=0.803;LDAF=0.0139;AVGPOST=0.9943;RSQ=0.8609;ERATE=0.0004;THETA=0.0068;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 17039177 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.886;LDAF=0.0233;AVGPOST=0.9930;RSQ=0.8866;ERATE=0.0008;THETA=0.0053;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 17039262 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.902;BRSQ=0.643;LDAF=0.1887;AVGPOST=0.8988;RSQ=0.6974;ERATE=0.0105;THETA=0.0059;AC=360;AN=2184 GT:DS:GL:BD 0.16483517 0
1 17039285 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.961;BRSQ=0.840;LDAF=0.1492;AVGPOST=0.9586;RSQ=0.8575;ERATE=0.0055;THETA=0.0044;AC=307;AN=2184 GT:DS:GL:BD 0.14056776 0
1 17039286 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.783;LDAF=0.0130;AVGPOST=0.9931;RSQ=0.7841;ERATE=0.0020;THETA=0.0068;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 17039584 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.854;LDAF=0.0051;AVGPOST=0.9975;RSQ=0.7979;ERATE=0.0004;THETA=0.0134;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 17039961 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.953;LDAF=0.0325;AVGPOST=0.9955;RSQ=0.9454;ERATE=0.0011;THETA=0.0067;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 17040421 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.857;LDAF=0.0198;AVGPOST=0.9941;RSQ=0.8896;ERATE=0.0007;THETA=0.0047;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 17040737 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.929;LDAF=0.0185;AVGPOST=0.9966;RSQ=0.9312;ERATE=0.0003;THETA=0.0067;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 17041264 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.791;LDAF=0.0509;AVGPOST=0.9843;RSQ=0.8758;ERATE=0.0005;THETA=0.0059;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 17041487 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.865;LDAF=0.0628;AVGPOST=0.9801;RSQ=0.8650;ERATE=0.0060;THETA=0.0040;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 17041516 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.960;BRSQ=0.759;LDAF=0.0890;AVGPOST=0.9593;RSQ=0.7930;ERATE=0.0057;THETA=0.0030;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 17041613 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.815;LDAF=0.0510;AVGPOST=0.9844;RSQ=0.8746;ERATE=0.0013;THETA=0.0112;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 17041658 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.678;LDAF=0.0051;AVGPOST=0.9971;RSQ=0.7717;ERATE=0.0005;THETA=0.0136;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 17041838 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.893;LDAF=0.0569;AVGPOST=0.9862;RSQ=0.9013;ERATE=0.0029;THETA=0.0038;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 17042293 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.855;LDAF=0.0070;AVGPOST=0.9978;RSQ=0.8578;ERATE=0.0006;THETA=0.0047;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 17042308 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.900;LDAF=0.0221;AVGPOST=0.9965;RSQ=0.9433;ERATE=0.0004;THETA=0.0048;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 17042532 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.863;LDAF=0.1570;AVGPOST=0.9659;RSQ=0.8909;ERATE=0.0068;THETA=0.0158;AC=332;AN=2184 GT:DS:GL:BD 0.15201466 0
1 17043181 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5611;ERATE=0.0004;THETA=0.0077;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17043412 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.821;LDAF=0.0681;AVGPOST=0.9768;RSQ=0.8487;ERATE=0.0007;THETA=0.0082;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 17043446 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.685;LDAF=0.0026;AVGPOST=0.9985;RSQ=0.7434;ERATE=0.0006;THETA=0.0195;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17043467 rs55689027 GA G 12080 PASS INDEL;BAVGPOST=0.963;BRSQ=0.860;LDAF=0.1419;AVGPOST=0.9643;RSQ=0.8780;ERATE=0.0006;THETA=0.0054;AC=298;AN=2184 GT:DS:GL:BD 0.13644689 0
1 17043599 . TC T 848 PASS INDEL;BAVGPOST=0.994;BRSQ=0.845;LDAF=0.0213;AVGPOST=0.9957;RSQ=0.9206;ERATE=0.0003;THETA=0.0182;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 17044032 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.927;LDAF=0.8999;AVGPOST=0.9866;RSQ=0.9443;ERATE=0.0004;THETA=0.0049;AC=1967;AN=2184 GT:DS:GL:BD 0.90064102 1
1 17044335 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.879;LDAF=0.9180;AVGPOST=0.9892;RSQ=0.9429;ERATE=0.0009;THETA=0.0088;AC=2005;AN=2184 GT:DS:GL:BD 0.91804028 1
1 17044457 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.955;LDAF=0.9160;AVGPOST=0.9917;RSQ=0.9581;ERATE=0.0004;THETA=0.0051;AC=1996;AN=2184 GT:DS:GL:BD 0.91391939 1
1 17044696 . TCA T 182 PASS INDEL;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0026;AVGPOST=0.9992;RSQ=0.8717;ERATE=0.0003;THETA=0.0053;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17045200 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.929;LDAF=0.9335;AVGPOST=0.9922;RSQ=0.9501;ERATE=0.0006;THETA=0.0062;AC=2036;AN=2184 GT:DS:GL:BD 0.93223441 1
1 17045271 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.960;LDAF=0.0263;AVGPOST=0.9973;RSQ=0.9623;ERATE=0.0007;THETA=0.0009;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 17045378 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.811;LDAF=0.0137;AVGPOST=0.9963;RSQ=0.8791;ERATE=0.0004;THETA=0.0038;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 17045669 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.782;LDAF=0.0059;AVGPOST=0.9974;RSQ=0.8311;ERATE=0.0009;THETA=0.0054;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 17045784 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.861;LDAF=0.0182;AVGPOST=0.9937;RSQ=0.8753;ERATE=0.0004;THETA=0.0040;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 17045813 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.874;LDAF=0.0133;AVGPOST=0.9963;RSQ=0.8884;ERATE=0.0004;THETA=0.0071;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 17045979 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.816;LDAF=0.0142;AVGPOST=0.9933;RSQ=0.8044;ERATE=0.0005;THETA=0.0014;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 17046084 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.550;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8455;ERATE=0.0003;THETA=0.0039;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17046139 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.618;LDAF=0.0211;AVGPOST=0.9835;RSQ=0.6610;ERATE=0.0016;THETA=0.0070;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 17046194 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.681;LDAF=0.0343;AVGPOST=0.9763;RSQ=0.7127;ERATE=0.0033;THETA=0.0120;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 17046549 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.957;BRSQ=0.755;LDAF=0.4594;AVGPOST=0.9577;RSQ=0.7942;ERATE=0.0274;THETA=0.0111;AC=994;AN=2184 GT:DS:GL:BD 0.45512819 0
1 17046715 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.735;LDAF=0.0080;AVGPOST=0.9958;RSQ=0.7924;ERATE=0.0023;THETA=0.0027;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 17046796 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.949;LDAF=0.9212;AVGPOST=0.9919;RSQ=0.9552;ERATE=0.0009;THETA=0.0009;AC=2010;AN=2184 GT:DS:GL:BD 0.92032969 1
1 17047084 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.784;LDAF=0.0056;AVGPOST=0.9972;RSQ=0.8126;ERATE=0.0003;THETA=0.0095;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 17047094 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0098;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17047762 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.780;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4848;ERATE=0.0004;THETA=0.0128;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17048363 rs5772713 GT G 184250 PASS INDEL;BAVGPOST=0.978;BRSQ=0.926;LDAF=0.8008;AVGPOST=0.9775;RSQ=0.9390;ERATE=0.0056;THETA=0.0091;AC=1759;AN=2184 GT:DS:GL:BD 0.80540293 1
1 17048584 rs3982087 CTA C 15730 PASS INDEL;BAVGPOST=0.987;BRSQ=0.948;LDAF=0.1428;AVGPOST=0.9850;RSQ=0.9414;ERATE=0.0014;THETA=0.0066;AC=303;AN=2184 GT:DS:GL:BD 0.13873626 0
1 17048783 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.910;LDAF=0.0237;AVGPOST=0.9943;RSQ=0.9127;ERATE=0.0008;THETA=0.0154;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 17049005 . T TC 192 PASS INDEL;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9236;ERATE=0.0003;THETA=0.0115;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17049808 rs57178125 A AT 332 PASS INDEL;BAVGPOST=0.999;BRSQ=0.819;LDAF=0.0039;AVGPOST=0.9989;RSQ=0.8857;ERATE=0.0013;THETA=0.0055;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 17050411 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.878;LDAF=0.9561;AVGPOST=0.9910;RSQ=0.9169;ERATE=0.0004;THETA=0.0209;AC=2092;AN=2184 GT:DS:GL:BD 0.95787543 1
1 17050493 rs63228660 AGAT A 162536 PASS INDEL;BAVGPOST=0.978;BRSQ=0.913;LDAF=0.8565;AVGPOST=0.9766;RSQ=0.9263;ERATE=0.0076;THETA=0.0317;AC=1876;AN=2184 GT:DS:GL:BD 0.85897434 1
1 17050869 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7737;ERATE=0.0003;THETA=0.0135;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17050974 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.558;LDAF=0.0066;AVGPOST=0.9943;RSQ=0.6710;ERATE=0.0025;THETA=0.0178;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 17051294 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.927;LDAF=0.0184;AVGPOST=0.9967;RSQ=0.9306;ERATE=0.0004;THETA=0.0125;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 17051297 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8348;ERATE=0.0009;THETA=0.0166;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17051534 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6180;ERATE=0.0003;THETA=0.0340;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17051624 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.796;LDAF=0.0093;AVGPOST=0.9952;RSQ=0.7870;ERATE=0.0007;THETA=0.0152;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 17051694 . AC A 77 PASS INDEL;BAVGPOST=0.999;BRSQ=0.768;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6652;ERATE=0.0005;THETA=0.0206;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17053722 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.876;LDAF=0.9484;AVGPOST=0.9879;RSQ=0.9012;ERATE=0.0017;THETA=0.0184;AC=2072;AN=2184 GT:DS:GL:BD 0.94871795 1
1 17054245 rs68142617 GC G 6729 PASS INDEL;BAVGPOST=0.980;BRSQ=0.889;LDAF=0.0955;AVGPOST=0.9809;RSQ=0.9062;ERATE=0.0018;THETA=0.0312;AC=202;AN=2184 GT:DS:GL:BD 0.09249084 0
1 17055562 . A AT 465 PASS INDEL;BAVGPOST=0.974;BRSQ=0.577;LDAF=0.0395;AVGPOST=0.9608;RSQ=0.5550;ERATE=0.0129;THETA=0.0273;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 17055595 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.949;BRSQ=0.659;LDAF=0.0657;AVGPOST=0.9615;RSQ=0.7434;ERATE=0.0045;THETA=0.0115;AC=114;AN=2184 GT:DS:GL:BD 0.05219780 0
1 17055655 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.945;BRSQ=0.787;LDAF=0.1549;AVGPOST=0.9403;RSQ=0.8031;ERATE=0.0098;THETA=0.0195;AC=310;AN=2184 GT:DS:GL:BD 0.14194140 0
1 17057002 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.847;LDAF=0.9178;AVGPOST=0.9571;RSQ=0.7716;ERATE=0.0011;THETA=0.0246;AC=2025;AN=2184 GT:DS:GL:BD 0.92719781 1
1 17057329 . AC A 155 PASS INDEL;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0109;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17058688 rs57374857 CTTG C 12979 PASS INDEL;BAVGPOST=0.735;BRSQ=0.342;LDAF=0.3471;AVGPOST=0.7452;RSQ=0.4650;ERATE=0.0599;THETA=0.0157;AC=562;AN=2184 GT:DS:GL:BD 0.25732601 0
1 17058925 . GGGGAA G 203 PASS INDEL;BAVGPOST=0.997;BRSQ=0.696;LDAF=0.0051;AVGPOST=0.9954;RSQ=0.5829;ERATE=0.0012;THETA=0.0069;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 17060199 . CT C 4807 PASS INDEL;BAVGPOST=0.681;BRSQ=0.252;LDAF=0.2873;AVGPOST=0.7150;RSQ=0.4028;ERATE=0.0150;THETA=0.0138;AC=387;AN=2184 GT:DS:GL:BD 0.17719780 0
1 17061164 . G GC 42 PASS INDEL;BAVGPOST=0.864;BRSQ=0.050;LDAF=0.1631;AVGPOST=0.7230;RSQ=0.1262;ERATE=0.0109;THETA=0.0176;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 17066847 . A AG 171 PASS INDEL;BAVGPOST=0.808;BRSQ=0.052;LDAF=0.1743;AVGPOST=0.7117;RSQ=0.1368;ERATE=0.0135;THETA=0.0133;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 17067190 . A AT 61 PASS INDEL;BAVGPOST=0.954;BRSQ=0.077;LDAF=0.0749;AVGPOST=0.8678;RSQ=0.1610;ERATE=0.0045;THETA=0.0039;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 17070002 . A AT 115 PASS INDEL;BAVGPOST=0.946;BRSQ=0.214;LDAF=0.1023;AVGPOST=0.8226;RSQ=0.1782;ERATE=0.0140;THETA=0.0286;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 17070128 . G GAAAAA 9786 PASS INDEL;BAVGPOST=0.658;BRSQ=0.237;LDAF=0.3345;AVGPOST=0.7138;RSQ=0.3941;ERATE=0.0045;THETA=0.0177;AC=512;AN=2184 GT:DS:GL:BD 0.23443224 0
1 17071197 . T TG 18 PASS INDEL;BAVGPOST=0.948;BRSQ=0.046;LDAF=0.0880;AVGPOST=0.8446;RSQ=0.1805;ERATE=0.0081;THETA=0.0138;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 17072266 . CAAA C 45 PASS INDEL;BAVGPOST=0.694;BRSQ=0.037;LDAF=0.1665;AVGPOST=0.7197;RSQ=0.1224;ERATE=0.0074;THETA=0.0068;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 17072835 . AC A 164 PASS INDEL;BAVGPOST=0.931;BRSQ=0.102;LDAF=0.1149;AVGPOST=0.8007;RSQ=0.1599;ERATE=0.0064;THETA=0.0235;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 17073292 . TG T 23 PASS INDEL;BAVGPOST=0.900;BRSQ=0.028;LDAF=0.0496;AVGPOST=0.9138;RSQ=0.2104;ERATE=0.0030;THETA=0.0187;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 17077117 . GC G 321 PASS INDEL;BAVGPOST=0.995;BRSQ=0.583;LDAF=0.0084;AVGPOST=0.9933;RSQ=0.6976;ERATE=0.0005;THETA=0.0069;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 17077769 . GGA G 594 PASS INDEL;BAVGPOST=0.978;BRSQ=0.516;LDAF=0.0283;AVGPOST=0.9706;RSQ=0.5202;ERATE=0.0027;THETA=0.0332;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 17077779 . CAA C 6 PASS INDEL;BAVGPOST=0.998;BRSQ=0.416;LDAF=0.0035;AVGPOST=0.9939;RSQ=0.2388;ERATE=0.0009;THETA=0.0080;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17079913 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.957;BRSQ=0.737;LDAF=0.9230;AVGPOST=0.9619;RSQ=0.7879;ERATE=0.0011;THETA=0.0155;AC=2038;AN=2184 GT:DS:GL:BD 0.93315017 1
1 17080144 . CAT C 151 PASS INDEL;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.4994;ERATE=0.0003;THETA=0.0182;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17080327 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.795;BRSQ=0.663;LDAF=0.4973;AVGPOST=0.8286;RSQ=0.7442;ERATE=0.0081;THETA=0.0071;AC=1088;AN=2184 GT:DS:GL:BD 0.49816850 0
1 17082176 . TA T 4046 PASS INDEL;BAVGPOST=0.991;BRSQ=0.888;LDAF=0.0444;AVGPOST=0.9908;RSQ=0.9166;ERATE=0.0015;THETA=0.0302;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 17082480 . TA T 418 PASS INDEL;BAVGPOST=0.997;BRSQ=0.837;LDAF=0.0091;AVGPOST=0.9969;RSQ=0.8628;ERATE=0.0006;THETA=0.0184;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 17082935 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.802;LDAF=0.0602;AVGPOST=0.9815;RSQ=0.8719;ERATE=0.0029;THETA=0.0183;AC=124;AN=2184 GT:DS:GL:BD 0.05677656 0
1 17082951 . CCT C 73 PASS INDEL;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6292;ERATE=0.0003;THETA=0.0125;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17085050 . C CCT 108 PASS INDEL;BAVGPOST=0.996;BRSQ=0.426;LDAF=0.0030;AVGPOST=0.9966;RSQ=0.5099;ERATE=0.0006;THETA=0.0290;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17085165 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.919;BRSQ=0.503;LDAF=0.9119;AVGPOST=0.9043;RSQ=0.5552;ERATE=0.0063;THETA=0.0122;AC=2059;AN=2184 GT:DS:GL:BD 0.94276559 1
1 17085677 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.852;BRSQ=0.532;LDAF=0.2911;AVGPOST=0.8409;RSQ=0.5849;ERATE=0.0144;THETA=0.0169;AC=515;AN=2184 GT:DS:GL:BD 0.23580585 0
1 17085712 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.865;BRSQ=0.578;LDAF=0.3429;AVGPOST=0.8572;RSQ=0.6166;ERATE=0.0023;THETA=0.0314;AC=676;AN=2184 GT:DS:GL:BD 0.30952382 0
1 17085791 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.945;BRSQ=0.582;LDAF=0.0823;AVGPOST=0.9320;RSQ=0.6255;ERATE=0.0183;THETA=0.0245;AC=126;AN=2184 GT:DS:GL:BD 0.05769231 0
1 17085820 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.959;BRSQ=0.600;LDAF=0.0549;AVGPOST=0.9483;RSQ=0.6133;ERATE=0.0115;THETA=0.0212;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 17085834 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.869;BRSQ=0.661;LDAF=0.7348;AVGPOST=0.8749;RSQ=0.7102;ERATE=0.0031;THETA=0.0162;AC=1678;AN=2184 GT:DS:GL:BD 0.76831502 1
1 17085908 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.852;BRSQ=0.560;LDAF=0.3103;AVGPOST=0.8517;RSQ=0.6423;ERATE=0.0278;THETA=0.0100;AC=583;AN=2184 GT:DS:GL:BD 0.26694140 0
1 17085995 . G GC 331 PASS INDEL;BAVGPOST=0.965;BRSQ=0.387;LDAF=0.0378;AVGPOST=0.9486;RSQ=0.3885;ERATE=0.0053;THETA=0.0207;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 17085999 . CCCCG C 642 PASS INDEL;BAVGPOST=0.941;BRSQ=0.533;LDAF=0.0679;AVGPOST=0.9225;RSQ=0.5032;ERATE=0.0105;THETA=0.0130;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 17086002 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0048;AVGPOST=0.9969;RSQ=0.7746;ERATE=0.0004;THETA=0.0080;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 17086002 rs3982176 CG C 7903 PASS INDEL;BAVGPOST=0.891;BRSQ=0.215;LDAF=0.9060;AVGPOST=0.8517;RSQ=0.2721;ERATE=0.0095;THETA=0.0273;AC=2118;AN=2184 GT:DS:GL:BD 0.96978021 1
1 17086052 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.782;BRSQ=0.411;LDAF=0.7595;AVGPOST=0.7688;RSQ=0.4755;ERATE=0.0259;THETA=0.0133;AC=1830;AN=2184 GT:DS:GL:BD 0.83791208 1
1 17086084 . C CG 310 PASS INDEL;BAVGPOST=0.757;BRSQ=0.235;LDAF=0.2250;AVGPOST=0.7229;RSQ=0.3406;ERATE=0.0133;THETA=0.0179;AC=244;AN=2184 GT:DS:GL:BD 0.11172161 0
1 17087244 rs58502471 AC A 12698 PASS INDEL;BAVGPOST=0.874;BRSQ=0.625;LDAF=0.2694;AVGPOST=0.8558;RSQ=0.6485;ERATE=0.0211;THETA=0.0182;AC=471;AN=2184 GT:DS:GL:BD 0.21565934 0
1 17087841 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.936;BRSQ=0.626;LDAF=0.9340;AVGPOST=0.9537;RSQ=0.6954;ERATE=0.0006;THETA=0.0147;AC=2072;AN=2184 GT:DS:GL:BD 0.94871795 1
1 17088194 . GC G 919 PASS INDEL;BAVGPOST=0.989;BRSQ=0.722;LDAF=0.0181;AVGPOST=0.9885;RSQ=0.7468;ERATE=0.0007;THETA=0.0192;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 17089744 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.947;BRSQ=0.773;LDAF=0.1381;AVGPOST=0.9394;RSQ=0.7985;ERATE=0.0112;THETA=0.0023;AC=264;AN=2184 GT:DS:GL:BD 0.12087912 0
1 17090775 . CG C 2118 PASS INDEL;BAVGPOST=0.990;BRSQ=0.871;LDAF=0.0336;AVGPOST=0.9905;RSQ=0.8840;ERATE=0.0019;THETA=0.0128;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 17091039 . GC G 186 PASS INDEL;BAVGPOST=0.956;BRSQ=0.343;LDAF=0.0455;AVGPOST=0.9696;RSQ=0.7574;ERATE=0.0004;THETA=0.0197;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 17091129 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.920;LDAF=0.1297;AVGPOST=0.9786;RSQ=0.9221;ERATE=0.0013;THETA=0.0082;AC=279;AN=2184 GT:DS:GL:BD 0.12774725 0
1 17091144 . CAG C 322 PASS INDEL;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0023;AVGPOST=0.9995;RSQ=0.9060;ERATE=0.0005;THETA=0.0059;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17091214 . GT G 518 PASS INDEL;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0048;AVGPOST=0.9986;RSQ=0.8808;ERATE=0.0007;THETA=0.0124;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 17091234 . A AT 96 PASS INDEL;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0170;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17091322 . AC A 11746 PASS INDEL;BAVGPOST=0.977;BRSQ=0.879;LDAF=0.1182;AVGPOST=0.9760;RSQ=0.9037;ERATE=0.0029;THETA=0.0062;AC=253;AN=2184 GT:DS:GL:BD 0.11584249 0
1 17091817 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.910;BRSQ=0.773;LDAF=0.6801;AVGPOST=0.9092;RSQ=0.8004;ERATE=0.0130;THETA=0.0140;AC=1511;AN=2184 GT:DS:GL:BD 0.69184983 1
1 17091930 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.802;LDAF=0.0484;AVGPOST=0.9760;RSQ=0.7956;ERATE=0.0068;THETA=0.0030;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 17091962 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4837;ERATE=0.0004;THETA=0.0122;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17091969 rs59201459 TG T 6541 PASS INDEL;BAVGPOST=0.966;BRSQ=0.799;LDAF=0.0987;AVGPOST=0.9648;RSQ=0.8461;ERATE=0.0007;THETA=0.0031;AC=208;AN=2184 GT:DS:GL:BD 0.09523810 0
1 17092009 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0054;AVGPOST=0.9977;RSQ=0.8605;ERATE=0.0003;THETA=0.0104;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 17092278 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.895;LDAF=0.0090;AVGPOST=0.9970;RSQ=0.8918;ERATE=0.0007;THETA=0.0096;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 17093319 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.949;LDAF=0.0284;AVGPOST=0.9960;RSQ=0.9442;ERATE=0.0005;THETA=0.0222;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 17093455 . GA G 316 PASS INDEL;BAVGPOST=0.984;BRSQ=0.688;LDAF=0.0294;AVGPOST=0.9819;RSQ=0.7710;ERATE=0.0005;THETA=0.0176;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 17094212 . AT A 210 PASS INDEL;BAVGPOST=0.993;BRSQ=0.585;LDAF=0.0078;AVGPOST=0.9936;RSQ=0.6442;ERATE=0.0005;THETA=0.0152;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 17099295 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.802;LDAF=0.0355;AVGPOST=0.9815;RSQ=0.8046;ERATE=0.0006;THETA=0.0154;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 17099895 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.719;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6061;ERATE=0.0003;THETA=0.0061;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17100771 . AT A 1922 PASS INDEL;BAVGPOST=0.985;BRSQ=0.845;LDAF=0.0538;AVGPOST=0.9824;RSQ=0.8696;ERATE=0.0036;THETA=0.0212;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 17101163 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.912;BRSQ=0.653;LDAF=0.1770;AVGPOST=0.8824;RSQ=0.6422;ERATE=0.0262;THETA=0.0108;AC=286;AN=2184 GT:DS:GL:BD 0.13095239 0
1 17105120 . T TCCAATCATG 1178 PASS INDEL;BAVGPOST=0.973;BRSQ=0.366;LDAF=0.0303;AVGPOST=0.9567;RSQ=0.3766;ERATE=0.0011;THETA=0.0182;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 17105232 . ACTCT A 1615 PASS INDEL;BAVGPOST=0.753;BRSQ=0.112;LDAF=0.2170;AVGPOST=0.6791;RSQ=0.2062;ERATE=0.0171;THETA=0.0084;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 17106129 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.929;LDAF=0.0186;AVGPOST=0.9977;RSQ=0.9575;ERATE=0.0004;THETA=0.0144;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 17106260 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0281;AVGPOST=0.9977;RSQ=0.9697;ERATE=0.0004;THETA=0.0153;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 17106514 . TAC T 5152 PASS INDEL;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0283;AVGPOST=0.9973;RSQ=0.9618;ERATE=0.0007;THETA=0.0108;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 17108709 . TCTTG T 6571 PASS INDEL;BAVGPOST=0.980;BRSQ=0.853;LDAF=0.0776;AVGPOST=0.9764;RSQ=0.8619;ERATE=0.0048;THETA=0.0051;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 17108833 rs113772896 GGCC G 1599 PASS INDEL;BAVGPOST=0.992;BRSQ=0.835;LDAF=0.0259;AVGPOST=0.9915;RSQ=0.8422;ERATE=0.0014;THETA=0.0271;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 17108931 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.453;LDAF=0.9668;AVGPOST=0.9643;RSQ=0.5561;ERATE=0.0020;THETA=0.0140;AC=2137;AN=2184 GT:DS:GL:BD 0.97847986 1
1 17109032 . G GT 1018 PASS INDEL;BAVGPOST=0.995;BRSQ=0.791;LDAF=0.0141;AVGPOST=0.9927;RSQ=0.7755;ERATE=0.0010;THETA=0.0240;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 17109095 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0009;THETA=0.0162;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17109295 . GC G 1306 PASS INDEL;BAVGPOST=0.997;BRSQ=0.909;LDAF=0.0179;AVGPOST=0.9965;RSQ=0.9242;ERATE=0.0003;THETA=0.0167;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 17109568 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.721;LDAF=0.9725;AVGPOST=0.9840;RSQ=0.7577;ERATE=0.0007;THETA=0.0090;AC=2137;AN=2184 GT:DS:GL:BD 0.97847986 1
1 17109689 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.935;BRSQ=0.745;LDAF=0.8531;AVGPOST=0.9298;RSQ=0.7677;ERATE=0.0120;THETA=0.0276;AC=1913;AN=2184 GT:DS:GL:BD 0.87591577 1
1 17110071 . CTTAT C 30 PASS INDEL;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.5893;ERATE=0.0007;THETA=0.0183;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17110529 . TA T 199 PASS INDEL;BAVGPOST=0.986;BRSQ=0.306;LDAF=0.0129;AVGPOST=0.9819;RSQ=0.3956;ERATE=0.0014;THETA=0.0123;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 17112454 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.964;BRSQ=0.792;LDAF=0.1030;AVGPOST=0.9577;RSQ=0.8060;ERATE=0.0064;THETA=0.0227;AC=200;AN=2184 GT:DS:GL:BD 0.09157509 0
1 17113298 . ACT A 1461 PASS INDEL;BAVGPOST=0.995;BRSQ=0.885;LDAF=0.0179;AVGPOST=0.9957;RSQ=0.9039;ERATE=0.0004;THETA=0.0203;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 17113378 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.415;LDAF=0.0038;AVGPOST=0.9936;RSQ=0.2645;ERATE=0.0005;THETA=0.0064;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17116094 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.648;LDAF=0.0024;AVGPOST=0.9971;RSQ=0.4194;ERATE=0.0011;THETA=0.0219;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17116355 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.832;BRSQ=0.620;LDAF=0.3066;AVGPOST=0.8346;RSQ=0.7079;ERATE=0.0022;THETA=0.0021;AC=578;AN=2184 GT:DS:GL:BD 0.26465201 0
1 17116830 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.960;BRSQ=0.837;LDAF=0.1370;AVGPOST=0.9660;RSQ=0.8746;ERATE=0.0009;THETA=0.0146;AC=280;AN=2184 GT:DS:GL:BD 0.12820514 0
1 17117535 . G GT 605 PASS INDEL;BAVGPOST=0.984;BRSQ=0.558;LDAF=0.0190;AVGPOST=0.9832;RSQ=0.6399;ERATE=0.0012;THETA=0.0063;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 17118217 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.839;LDAF=0.0950;AVGPOST=0.9727;RSQ=0.8748;ERATE=0.0044;THETA=0.0142;AC=196;AN=2184 GT:DS:GL:BD 0.08974359 0
1 17118734 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.814;LDAF=0.0402;AVGPOST=0.9862;RSQ=0.8662;ERATE=0.0013;THETA=0.0071;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 17119689 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.720;LDAF=0.0088;AVGPOST=0.9912;RSQ=0.5699;ERATE=0.0016;THETA=0.0151;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 17119948 . CTCT C 230 PASS INDEL;BAVGPOST=0.994;BRSQ=0.498;LDAF=0.0103;AVGPOST=0.9861;RSQ=0.3928;ERATE=0.0031;THETA=0.0101;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 17119973 . TG T 959 PASS INDEL;BAVGPOST=0.994;BRSQ=0.873;LDAF=0.0189;AVGPOST=0.9872;RSQ=0.7493;ERATE=0.0006;THETA=0.0182;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 17120995 rs72506945 T TTG 105040 PASS INDEL;BAVGPOST=0.942;BRSQ=0.844;LDAF=0.6042;AVGPOST=0.9445;RSQ=0.8748;ERATE=0.0007;THETA=0.0014;AC=1320;AN=2184 GT:DS:GL:BD 0.60439563 1
1 17120996 rs72506945 T TG 69344 PASS INDEL;BAVGPOST=0.942;BRSQ=0.844;LDAF=0.6034;AVGPOST=0.9438;RSQ=0.8744;ERATE=0.0007;THETA=0.0111;AC=1319;AN=2184 GT:DS:GL:BD 0.60393775 1
1 17121025 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.715;LDAF=0.0044;AVGPOST=0.9957;RSQ=0.6160;ERATE=0.0017;THETA=0.0100;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 17121214 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9107;ERATE=0.0008;THETA=0.0068;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17121498 . TA T 19 PASS INDEL;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6334;ERATE=0.0004;THETA=0.0120;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17122306 . AG A 106 PASS INDEL;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7750;ERATE=0.0007;THETA=0.0045;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17122436 . AAAAG A 17 PASS INDEL;BAVGPOST=0.950;BRSQ=0.224;LDAF=0.0220;AVGPOST=0.9649;RSQ=0.3555;ERATE=0.0019;THETA=0.0117;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 17122492 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0169;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17122495 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8072;ERATE=0.0003;THETA=0.0080;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17123502 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.888;BRSQ=0.703;LDAF=0.4281;AVGPOST=0.8739;RSQ=0.7382;ERATE=0.0161;THETA=0.0054;AC=918;AN=2184 GT:DS:GL:BD 0.42032966 0
1 17123612 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0030;AVGPOST=0.9985;RSQ=0.7655;ERATE=0.0005;THETA=0.0126;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17123687 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7212;ERATE=0.0004;THETA=0.0068;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17124519 . A ATG 12271 PASS INDEL;BAVGPOST=0.954;BRSQ=0.786;LDAF=0.1097;AVGPOST=0.9524;RSQ=0.8030;ERATE=0.0070;THETA=0.0141;AC=201;AN=2184 GT:DS:GL:BD 0.09203297 0
1 17125231 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.542;LDAF=0.0074;AVGPOST=0.9935;RSQ=0.6106;ERATE=0.0007;THETA=0.0091;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 17125552 . GA G 86 PASS INDEL;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6060;ERATE=0.0004;THETA=0.0122;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17125601 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.949;BRSQ=0.826;LDAF=0.1662;AVGPOST=0.9541;RSQ=0.8540;ERATE=0.0021;THETA=0.0102;AC=342;AN=2184 GT:DS:GL:BD 0.15659341 0
1 17175686 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.825;LDAF=0.0994;AVGPOST=0.9396;RSQ=0.7233;ERATE=0.0066;THETA=0.0217;AC=160;AN=2184 GT:DS:GL:BD 0.07326008 0
1 17175828 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.952;LDAF=0.0705;AVGPOST=0.9838;RSQ=0.8925;ERATE=0.0013;THETA=0.0098;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 17175830 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.541;LDAF=0.0114;AVGPOST=0.9897;RSQ=0.6087;ERATE=0.0011;THETA=0.0210;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 17175867 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.582;LDAF=0.0025;AVGPOST=0.9968;RSQ=0.4141;ERATE=0.0008;THETA=0.0165;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17175879 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.907;BRSQ=0.632;LDAF=0.1602;AVGPOST=0.8671;RSQ=0.6224;ERATE=0.0096;THETA=0.0177;AC=228;AN=2184 GT:DS:GL:BD 0.10439561 0
1 17176129 . C CT 21002 PASS INDEL;BAVGPOST=0.722;BRSQ=0.454;LDAF=0.5885;AVGPOST=0.7324;RSQ=0.5457;ERATE=0.0134;THETA=0.0091;AC=1358;AN=2184 GT:DS:GL:BD 0.62179488 1
1 17176131 . T TC 539 PASS INDEL;BAVGPOST=0.968;BRSQ=0.352;LDAF=0.0335;AVGPOST=0.9525;RSQ=0.3601;ERATE=0.0061;THETA=0.0161;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 17176138 . T TTC 175 PASS INDEL;BAVGPOST=0.988;BRSQ=0.291;LDAF=0.0085;AVGPOST=0.9857;RSQ=0.2850;ERATE=0.0023;THETA=0.0073;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17176349 . GC G 175 PASS INDEL;BAVGPOST=0.994;BRSQ=0.431;LDAF=0.0074;AVGPOST=0.9897;RSQ=0.3607;ERATE=0.0010;THETA=0.0183;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17176390 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.873;BRSQ=0.659;LDAF=0.3483;AVGPOST=0.8738;RSQ=0.7216;ERATE=0.0236;THETA=0.0194;AC=712;AN=2184 GT:DS:GL:BD 0.32600734 0
1 17179213 . T TA 65 PASS INDEL;BAVGPOST=0.949;BRSQ=0.084;LDAF=0.0569;AVGPOST=0.8961;RSQ=0.1361;ERATE=0.0087;THETA=0.0165;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 17180304 . G GA 247 PASS INDEL;BAVGPOST=0.959;BRSQ=0.208;LDAF=0.0910;AVGPOST=0.8413;RSQ=0.1767;ERATE=0.0088;THETA=0.0076;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 17181170 . C CAG 5 PASS INDEL;BAVGPOST=0.990;BRSQ=0.131;LDAF=0.0180;AVGPOST=0.9664;RSQ=0.1497;ERATE=0.0012;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17181362 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.939;BRSQ=0.748;LDAF=0.1468;AVGPOST=0.9333;RSQ=0.7869;ERATE=0.0109;THETA=0.0154;AC=277;AN=2184 GT:DS:GL:BD 0.12683150 0
1 17181613 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.861;LDAF=0.0932;AVGPOST=0.9728;RSQ=0.8755;ERATE=0.0053;THETA=0.0051;AC=187;AN=2184 GT:DS:GL:BD 0.08562271 0
1 17181839 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.965;BRSQ=0.782;LDAF=0.0968;AVGPOST=0.9619;RSQ=0.8255;ERATE=0.0095;THETA=0.0298;AC=189;AN=2184 GT:DS:GL:BD 0.08653846 0
1 17182481 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.643;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4377;ERATE=0.0005;THETA=0.0106;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17182499 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.921;BRSQ=0.794;LDAF=0.7971;AVGPOST=0.8734;RSQ=0.7270;ERATE=0.0035;THETA=0.0038;AC=1816;AN=2184 GT:DS:GL:BD 0.83150184 1
1 17182706 . TC T 164 PASS INDEL;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0038;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17182728 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.758;LDAF=0.0061;AVGPOST=0.9963;RSQ=0.7675;ERATE=0.0009;THETA=0.0108;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 17182821 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6373;ERATE=0.0003;THETA=0.0098;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17182843 rs35013786 TTAA T 13168 PASS INDEL;BAVGPOST=0.711;BRSQ=0.505;LDAF=0.6953;AVGPOST=0.7479;RSQ=0.6157;ERATE=0.0026;THETA=0.0221;AC=1705;AN=2184 GT:DS:GL:BD 0.78067768 1
1 17182849 . ATGT A 301 PASS INDEL;BAVGPOST=0.955;BRSQ=0.379;LDAF=0.0503;AVGPOST=0.9335;RSQ=0.4065;ERATE=0.0018;THETA=0.0076;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 17182850 . TGTC T 243 PASS INDEL;BAVGPOST=0.990;BRSQ=0.683;LDAF=0.0273;AVGPOST=0.9683;RSQ=0.5024;ERATE=0.0028;THETA=0.0106;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 17182921 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6474;ERATE=0.0008;THETA=0.0134;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17183180 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.927;BRSQ=0.711;LDAF=0.1675;AVGPOST=0.9202;RSQ=0.7389;ERATE=0.0149;THETA=0.0218;AC=316;AN=2184 GT:DS:GL:BD 0.14468865 0
1 17183222 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.842;BRSQ=0.443;LDAF=0.2043;AVGPOST=0.8316;RSQ=0.5142;ERATE=0.0313;THETA=0.0080;AC=295;AN=2184 GT:DS:GL:BD 0.13507326 0
1 17183453 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.790;BRSQ=0.466;LDAF=0.7429;AVGPOST=0.7447;RSQ=0.4955;ERATE=0.0073;THETA=0.0059;AC=1800;AN=2184 GT:DS:GL:BD 0.82417583 1
1 17183700 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.730;LDAF=0.0381;AVGPOST=0.9776;RSQ=0.7543;ERATE=0.0015;THETA=0.0097;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 17183991 rs72195497 GGTATA G 4035 PASS INDEL;BAVGPOST=0.812;BRSQ=0.265;LDAF=0.1832;AVGPOST=0.7659;RSQ=0.3594;ERATE=0.0069;THETA=0.0127;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 17183995 rs72195497 TA T 71 PASS INDEL;BAVGPOST=0.986;BRSQ=0.479;LDAF=0.0150;AVGPOST=0.9799;RSQ=0.4391;ERATE=0.0028;THETA=0.0115;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 17184185 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.943;LDAF=0.0610;AVGPOST=0.9932;RSQ=0.9513;ERATE=0.0004;THETA=0.0096;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 17184199 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.786;LDAF=0.0025;AVGPOST=0.9991;RSQ=0.8346;ERATE=0.0004;THETA=0.0116;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17184200 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.628;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7797;ERATE=0.0005;THETA=0.0147;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17185063 . AT A 752 PASS INDEL;BAVGPOST=0.981;BRSQ=0.746;LDAF=0.0484;AVGPOST=0.9686;RSQ=0.7173;ERATE=0.0050;THETA=0.0136;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 17185181 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.565;LDAF=0.0093;AVGPOST=0.9881;RSQ=0.4790;ERATE=0.0014;THETA=0.0056;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 17185259 rs67462538 AG A 243 PASS INDEL;BAVGPOST=0.983;BRSQ=0.589;LDAF=0.0251;AVGPOST=0.9774;RSQ=0.6570;ERATE=0.0016;THETA=0.0176;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 17185279 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.752;LDAF=0.0059;AVGPOST=0.9973;RSQ=0.8092;ERATE=0.0008;THETA=0.0130;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 17185364 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0074;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17185386 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0004;THETA=0.0084;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17185735 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.872;BRSQ=0.568;LDAF=0.2608;AVGPOST=0.8446;RSQ=0.5872;ERATE=0.0525;THETA=0.0098;AC=441;AN=2184 GT:DS:GL:BD 0.20192307 0
1 17186092 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.692;LDAF=0.0144;AVGPOST=0.9896;RSQ=0.6945;ERATE=0.0005;THETA=0.0018;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 17186101 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.935;LDAF=0.0628;AVGPOST=0.9919;RSQ=0.9437;ERATE=0.0009;THETA=0.0161;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 17186194 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.747;BRSQ=0.276;LDAF=0.2542;AVGPOST=0.7295;RSQ=0.3584;ERATE=0.0238;THETA=0.0143;AC=319;AN=2184 GT:DS:GL:BD 0.14606227 0
1 17186455 . CCG C 59 PASS INDEL;BAVGPOST=0.998;BRSQ=0.331;LDAF=0.0045;AVGPOST=0.9926;RSQ=0.2468;ERATE=0.0009;THETA=0.0030;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17186487 . TC T 257 PASS INDEL;BAVGPOST=0.973;BRSQ=0.312;LDAF=0.0284;AVGPOST=0.9648;RSQ=0.4737;ERATE=0.0023;THETA=0.0096;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 17186683 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.852;LDAF=0.0102;AVGPOST=0.9976;RSQ=0.9162;ERATE=0.0004;THETA=0.0202;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 17186742 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.745;LDAF=0.0415;AVGPOST=0.9812;RSQ=0.8014;ERATE=0.0009;THETA=0.0068;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 17187289 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.827;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8492;ERATE=0.0003;THETA=0.0082;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 17187392 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.893;LDAF=0.0179;AVGPOST=0.9949;RSQ=0.8794;ERATE=0.0005;THETA=0.0060;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 17187400 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.964;LDAF=0.0616;AVGPOST=0.9945;RSQ=0.9623;ERATE=0.0005;THETA=0.0083;AC=136;AN=2184 GT:DS:GL:BD 0.06227106 0
1 17187907 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.824;LDAF=0.0754;AVGPOST=0.9759;RSQ=0.8699;ERATE=0.0016;THETA=0.0208;AC=159;AN=2184 GT:DS:GL:BD 0.07280220 0
1 17187950 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.870;LDAF=0.0025;AVGPOST=0.9992;RSQ=0.8474;ERATE=0.0004;THETA=0.0048;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17188371 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0055;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17188379 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.753;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0089;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17188391 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.938;BRSQ=0.826;LDAF=0.2372;AVGPOST=0.9286;RSQ=0.8462;ERATE=0.0036;THETA=0.0068;AC=483;AN=2184 GT:DS:GL:BD 0.22115384 0
1 17188401 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.751;LDAF=0.0369;AVGPOST=0.9848;RSQ=0.8272;ERATE=0.0011;THETA=0.0081;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 17188410 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.407;LDAF=0.0050;AVGPOST=0.9941;RSQ=0.4764;ERATE=0.0014;THETA=0.0093;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17188485 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6252;ERATE=0.0004;THETA=0.0063;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17188488 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.931;LDAF=0.0583;AVGPOST=0.9922;RSQ=0.9463;ERATE=0.0004;THETA=0.0090;AC=126;AN=2184 GT:DS:GL:BD 0.05769231 0
1 17188489 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9125;ERATE=0.0003;THETA=0.0017;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17188494 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.5503;ERATE=0.0004;THETA=0.0064;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17188498 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0054;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17188968 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.661;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6432;ERATE=0.0004;THETA=0.0075;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17188976 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.958;LDAF=0.0346;AVGPOST=0.9932;RSQ=0.9216;ERATE=0.0003;THETA=0.0026;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 17189114 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.781;LDAF=0.0641;AVGPOST=0.9698;RSQ=0.8069;ERATE=0.0038;THETA=0.0015;AC=126;AN=2184 GT:DS:GL:BD 0.05769231 0
1 17189189 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.774;LDAF=0.0040;AVGPOST=0.9979;RSQ=0.7912;ERATE=0.0005;THETA=0.0035;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 17189264 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6171;ERATE=0.0003;THETA=0.0148;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17189440 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.663;LDAF=0.0063;AVGPOST=0.9926;RSQ=0.4913;ERATE=0.0012;THETA=0.0064;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 17189442 rs66670935 C CA 12084 PASS INDEL;BAVGPOST=0.736;BRSQ=0.529;LDAF=0.5591;AVGPOST=0.7411;RSQ=0.6169;ERATE=0.0111;THETA=0.0009;AC=1257;AN=2184 GT:DS:GL:BD 0.57554942 1
1 17189467 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.950;BRSQ=0.440;LDAF=0.0629;AVGPOST=0.9319;RSQ=0.5479;ERATE=0.0115;THETA=0.0037;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 17189537 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.960;LDAF=0.0357;AVGPOST=0.9936;RSQ=0.9295;ERATE=0.0004;THETA=0.0036;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 17189688 . TAGA T 85 PASS INDEL;BAVGPOST=0.991;BRSQ=0.538;LDAF=0.0134;AVGPOST=0.9838;RSQ=0.5050;ERATE=0.0024;THETA=0.0032;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 17190011 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.925;BRSQ=0.716;LDAF=0.1716;AVGPOST=0.9159;RSQ=0.7382;ERATE=0.0327;THETA=0.0104;AC=325;AN=2184 GT:DS:GL:BD 0.14880952 0
1 17190863 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.828;LDAF=0.0033;AVGPOST=0.9983;RSQ=0.7966;ERATE=0.0006;THETA=0.0057;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 17191103 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.869;BRSQ=0.551;LDAF=0.2918;AVGPOST=0.8634;RSQ=0.6172;ERATE=0.0487;THETA=0.0028;AC=540;AN=2184 GT:DS:GL:BD 0.24725275 0
1 17191311 . C CT 3078 PASS INDEL;BAVGPOST=0.944;BRSQ=0.688;LDAF=0.1211;AVGPOST=0.9243;RSQ=0.6675;ERATE=0.0160;THETA=0.0058;AC=194;AN=2184 GT:DS:GL:BD 0.08882784 0
1 17191353 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.750;LDAF=0.0361;AVGPOST=0.9945;RSQ=0.9381;ERATE=0.0005;THETA=0.0118;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 17191359 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5522;ERATE=0.0004;THETA=0.0058;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17191921 . AT A 1764 PASS INDEL;BAVGPOST=0.994;BRSQ=0.800;LDAF=0.0160;AVGPOST=0.9934;RSQ=0.8194;ERATE=0.0022;THETA=0.0109;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 17193557 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.948;BRSQ=0.742;LDAF=0.1272;AVGPOST=0.9410;RSQ=0.7779;ERATE=0.0220;THETA=0.0064;AC=249;AN=2184 GT:DS:GL:BD 0.11401099 0
1 17193954 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.745;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0003;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17193979 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6769;ERATE=0.0003;THETA=0.0051;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17194014 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.604;LDAF=0.0457;AVGPOST=0.9702;RSQ=0.7601;ERATE=0.0009;THETA=0.0142;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 17194930 . CA C 218 PASS INDEL;BAVGPOST=0.995;BRSQ=0.589;LDAF=0.0070;AVGPOST=0.9920;RSQ=0.4846;ERATE=0.0022;THETA=0.0123;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 17195188 . CT C 80 PASS INDEL;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4751;ERATE=0.0004;THETA=0.0158;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17195571 rs67159032 G GC 767 PASS INDEL;BAVGPOST=0.969;BRSQ=0.597;LDAF=0.0487;AVGPOST=0.9764;RSQ=0.8125;ERATE=0.0011;THETA=0.0114;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 17195681 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.811;LDAF=0.0490;AVGPOST=0.9817;RSQ=0.8573;ERATE=0.0005;THETA=0.0139;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 17195867 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8721;ERATE=0.0004;THETA=0.0084;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17196048 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.617;LDAF=0.0081;AVGPOST=0.9910;RSQ=0.5429;ERATE=0.0020;THETA=0.0071;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 17196056 . T TTC 1643 PASS INDEL;BAVGPOST=0.970;BRSQ=0.728;LDAF=0.0689;AVGPOST=0.9522;RSQ=0.6884;ERATE=0.0170;THETA=0.0019;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 17196096 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.721;LDAF=0.0023;AVGPOST=0.9972;RSQ=0.4760;ERATE=0.0005;THETA=0.0029;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17196215 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.865;LDAF=0.0150;AVGPOST=0.9959;RSQ=0.8900;ERATE=0.0005;THETA=0.0089;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 17196353 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.819;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.8135;ERATE=0.0004;THETA=0.0138;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17196361 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.836;LDAF=0.0021;AVGPOST=0.9990;RSQ=0.7921;ERATE=0.0005;THETA=0.0143;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17196387 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.963;LDAF=0.0383;AVGPOST=0.9960;RSQ=0.9558;ERATE=0.0003;THETA=0.0077;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 17196806 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.694;LDAF=0.0097;AVGPOST=0.9932;RSQ=0.7249;ERATE=0.0046;THETA=0.0100;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 17197597 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.662;LDAF=0.0120;AVGPOST=0.9922;RSQ=0.7660;ERATE=0.0007;THETA=0.0255;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 17198518 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.880;BRSQ=0.655;LDAF=0.7925;AVGPOST=0.8669;RSQ=0.6992;ERATE=0.0042;THETA=0.0112;AC=1817;AN=2184 GT:DS:GL:BD 0.83195972 1
1 17198709 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.645;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5417;ERATE=0.0004;THETA=0.0133;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17199059 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.927;BRSQ=0.738;LDAF=0.1972;AVGPOST=0.9074;RSQ=0.7403;ERATE=0.0324;THETA=0.0043;AC=367;AN=2184 GT:DS:GL:BD 0.16804029 0
1 17199123 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.818;BRSQ=0.491;LDAF=0.4399;AVGPOST=0.8249;RSQ=0.5513;ERATE=0.0558;THETA=0.0057;AC=899;AN=2184 GT:DS:GL:BD 0.41163003 0
1 17199370 rs57255004 CG C 18931 PASS INDEL;BAVGPOST=0.955;BRSQ=0.856;LDAF=0.1696;AVGPOST=0.9602;RSQ=0.8685;ERATE=0.0045;THETA=0.0070;AC=342;AN=2184 GT:DS:GL:BD 0.15659341 0
1 17199727 . C CA 462 PASS INDEL;BAVGPOST=0.998;BRSQ=0.842;LDAF=0.0053;AVGPOST=0.9976;RSQ=0.8002;ERATE=0.0007;THETA=0.0092;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 17199923 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.965;BRSQ=0.862;LDAF=0.8707;AVGPOST=0.9525;RSQ=0.8363;ERATE=0.0012;THETA=0.0067;AC=1908;AN=2184 GT:DS:GL:BD 0.87362635 1
1 17199932 rs60944649 CAG C 14699 PASS INDEL;BAVGPOST=0.757;BRSQ=0.430;LDAF=0.3481;AVGPOST=0.7756;RSQ=0.5071;ERATE=0.0488;THETA=0.0195;AC=583;AN=2184 GT:DS:GL:BD 0.26694140 0
1 17200206 rs57069045 C CT 8006 PASS INDEL;BAVGPOST=0.955;BRSQ=0.817;LDAF=0.1696;AVGPOST=0.9346;RSQ=0.7943;ERATE=0.0423;THETA=0.0226;AC=328;AN=2184 GT:DS:GL:BD 0.15018316 0
1 17201230 . CA C 486 PASS INDEL;BAVGPOST=0.966;BRSQ=0.489;LDAF=0.0588;AVGPOST=0.9252;RSQ=0.4152;ERATE=0.0123;THETA=0.0200;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 17202071 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.756;LDAF=0.0053;AVGPOST=0.9963;RSQ=0.7099;ERATE=0.0007;THETA=0.0076;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 17202150 . TC T 4364 PASS INDEL;BAVGPOST=0.987;BRSQ=0.905;LDAF=0.0570;AVGPOST=0.9871;RSQ=0.9046;ERATE=0.0006;THETA=0.0053;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 17202355 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.956;LDAF=0.8636;AVGPOST=0.9865;RSQ=0.9536;ERATE=0.0008;THETA=0.0079;AC=1894;AN=2184 GT:DS:GL:BD 0.86721611 1
1 17203854 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.937;LDAF=0.8751;AVGPOST=0.9848;RSQ=0.9410;ERATE=0.0005;THETA=0.0125;AC=1911;AN=2184 GT:DS:GL:BD 0.87500000 1
1 17204972 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.951;BRSQ=0.856;LDAF=0.7676;AVGPOST=0.9510;RSQ=0.8817;ERATE=0.0105;THETA=0.0187;AC=1686;AN=2184 GT:DS:GL:BD 0.77197802 1
1 17205179 . TGC T 21 PASS INDEL;BAVGPOST=0.999;BRSQ=0.683;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6273;ERATE=0.0005;THETA=0.0137;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17205526 . T TC 46 PASS INDEL;BAVGPOST=0.982;BRSQ=0.733;LDAF=0.0272;AVGPOST=0.9819;RSQ=0.7622;ERATE=0.0003;THETA=0.0045;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 17205527 . C CA 2633 PASS INDEL;BAVGPOST=0.993;BRSQ=0.912;LDAF=0.0464;AVGPOST=0.9893;RSQ=0.9039;ERATE=0.0049;THETA=0.0184;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 17205585 rs67126650 GA G 9243 PASS INDEL;BAVGPOST=0.914;BRSQ=0.729;LDAF=0.2341;AVGPOST=0.9150;RSQ=0.7723;ERATE=0.0392;THETA=0.0064;AC=465;AN=2184 GT:DS:GL:BD 0.21291208 0
1 17205666 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.821;LDAF=0.0533;AVGPOST=0.9782;RSQ=0.8337;ERATE=0.0101;THETA=0.0066;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 17205953 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.741;LDAF=0.0041;AVGPOST=0.9969;RSQ=0.6998;ERATE=0.0011;THETA=0.0125;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 17206036 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0027;AVGPOST=0.9993;RSQ=0.8882;ERATE=0.0004;THETA=0.0098;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17206240 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.792;LDAF=0.0077;AVGPOST=0.9981;RSQ=0.8882;ERATE=0.0007;THETA=0.0071;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 17206257 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.910;LDAF=0.1051;AVGPOST=0.9877;RSQ=0.9479;ERATE=0.0016;THETA=0.0048;AC=227;AN=2184 GT:DS:GL:BD 0.10393773 0
1 17206328 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0376;AVGPOST=0.9975;RSQ=0.9770;ERATE=0.0003;THETA=0.0164;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 17206532 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.844;LDAF=0.0284;AVGPOST=0.9863;RSQ=0.8156;ERATE=0.0014;THETA=0.0081;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 17207014 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0015;AVGPOST=0.9993;RSQ=0.7728;ERATE=0.0010;THETA=0.0109;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17207086 rs56160173 A AT 469 PASS INDEL;BAVGPOST=0.377;BRSQ=0.034;LDAF=0.3660;AVGPOST=0.5884;RSQ=0.2241;ERATE=0.0092;THETA=0.0025;AC=507;AN=2184 GT:DS:GL:BD 0.23214285 0
1 17207120 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.797;LDAF=0.0358;AVGPOST=0.9935;RSQ=0.9212;ERATE=0.0007;THETA=0.0051;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 17207202 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.905;BRSQ=0.693;LDAF=0.3595;AVGPOST=0.8977;RSQ=0.7254;ERATE=0.0382;THETA=0.0058;AC=731;AN=2184 GT:DS:GL:BD 0.33470696 0
1 17207216 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.893;LDAF=0.0054;AVGPOST=0.9966;RSQ=0.7719;ERATE=0.0005;THETA=0.0024;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 17207372 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0021;AVGPOST=0.9991;RSQ=0.8119;ERATE=0.0004;THETA=0.0035;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17207473 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.931;BRSQ=0.344;LDAF=0.0552;AVGPOST=0.9378;RSQ=0.5478;ERATE=0.0089;THETA=0.0034;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 17207502 . AT A 9842 PASS INDEL;BAVGPOST=0.773;BRSQ=0.558;LDAF=0.4686;AVGPOST=0.7691;RSQ=0.6069;ERATE=0.0198;THETA=0.0115;AC=1029;AN=2184 GT:DS:GL:BD 0.47115386 0
1 17207576 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.925;LDAF=0.0776;AVGPOST=0.9888;RSQ=0.9386;ERATE=0.0003;THETA=0.0009;AC=165;AN=2184 GT:DS:GL:BD 0.07554945 0
1 17207600 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0004;THETA=0.0076;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17207650 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.939;LDAF=0.0200;AVGPOST=0.9972;RSQ=0.9476;ERATE=0.0004;THETA=0.0043;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 17207652 . CA C 336 PASS INDEL;BAVGPOST=0.958;BRSQ=0.501;LDAF=0.0362;AVGPOST=0.9683;RSQ=0.6741;ERATE=0.0009;THETA=0.0009;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 17207704 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.8668;AVGPOST=0.9926;RSQ=0.9732;ERATE=0.0004;THETA=0.0038;AC=1895;AN=2184 GT:DS:GL:BD 0.86767399 1
1 17207711 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.927;LDAF=0.0279;AVGPOST=0.9954;RSQ=0.9343;ERATE=0.0041;THETA=0.0044;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 17207987 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.927;LDAF=0.0206;AVGPOST=0.9967;RSQ=0.9366;ERATE=0.0004;THETA=0.0017;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 17208049 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.967;LDAF=0.0388;AVGPOST=0.9971;RSQ=0.9718;ERATE=0.0005;THETA=0.0028;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 17208102 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.849;LDAF=0.0229;AVGPOST=0.9924;RSQ=0.8699;ERATE=0.0017;THETA=0.0070;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 17208328 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.652;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6555;ERATE=0.0004;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17208381 rs67937751 T TG 1523 PASS INDEL;BAVGPOST=0.962;BRSQ=0.778;LDAF=0.0781;AVGPOST=0.9510;RSQ=0.7229;ERATE=0.0183;THETA=0.0123;AC=131;AN=2184 GT:DS:GL:BD 0.05998169 0
1 17208383 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.959;LDAF=0.0178;AVGPOST=0.9981;RSQ=0.9539;ERATE=0.0005;THETA=0.0043;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 17208605 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0004;THETA=0.0053;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17208690 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.896;LDAF=0.0217;AVGPOST=0.9979;RSQ=0.9634;ERATE=0.0003;THETA=0.0023;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 17208715 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.977;LDAF=0.8650;AVGPOST=0.9848;RSQ=0.9497;ERATE=0.0006;THETA=0.0048;AC=1894;AN=2184 GT:DS:GL:BD 0.86721611 1
1 17208797 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.923;LDAF=0.0196;AVGPOST=0.9951;RSQ=0.9032;ERATE=0.0004;THETA=0.0038;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 17208878 . T TA 93 PASS INDEL;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17209053 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.858;LDAF=0.0073;AVGPOST=0.9975;RSQ=0.8564;ERATE=0.0018;THETA=0.0015;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 17209100 rs60999158 T TC 7206 PASS INDEL;BAVGPOST=0.930;BRSQ=0.688;LDAF=0.1484;AVGPOST=0.9105;RSQ=0.6831;ERATE=0.0230;THETA=0.0017;AC=260;AN=2184 GT:DS:GL:BD 0.11904762 0
1 17209111 rs67708968 TG T 167 PASS INDEL;BAVGPOST=0.997;BRSQ=0.697;LDAF=0.0060;AVGPOST=0.9962;RSQ=0.7508;ERATE=0.0005;THETA=0.0027;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 17209121 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.880;LDAF=0.0065;AVGPOST=0.9980;RSQ=0.8836;ERATE=0.0005;THETA=0.0031;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 17209136 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.644;LDAF=0.0063;AVGPOST=0.9953;RSQ=0.7106;ERATE=0.0005;THETA=0.0065;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 17209173 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.916;LDAF=0.0346;AVGPOST=0.9915;RSQ=0.9017;ERATE=0.0005;THETA=0.0173;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 17209319 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0129;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17209327 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.959;LDAF=0.0312;AVGPOST=0.9965;RSQ=0.9597;ERATE=0.0003;THETA=0.0063;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 17209671 rs113639584 AT A 3025 PASS INDEL;BAVGPOST=0.996;BRSQ=0.935;LDAF=0.0338;AVGPOST=0.9941;RSQ=0.9344;ERATE=0.0013;THETA=0.0075;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 17209715 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.972;LDAF=0.0315;AVGPOST=0.9973;RSQ=0.9676;ERATE=0.0003;THETA=0.0093;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 17209962 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.956;LDAF=0.0758;AVGPOST=0.9895;RSQ=0.9404;ERATE=0.0009;THETA=0.0061;AC=163;AN=2184 GT:DS:GL:BD 0.07463370 0
1 17210257 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17210273 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.963;LDAF=0.0377;AVGPOST=0.9966;RSQ=0.9644;ERATE=0.0004;THETA=0.0028;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 17210324 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.947;BRSQ=0.856;LDAF=0.8164;AVGPOST=0.9517;RSQ=0.8872;ERATE=0.0010;THETA=0.0018;AC=1795;AN=2184 GT:DS:GL:BD 0.82188642 1
1 17210325 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.947;BRSQ=0.857;LDAF=0.8147;AVGPOST=0.9534;RSQ=0.8926;ERATE=0.0006;THETA=0.0027;AC=1790;AN=2184 GT:DS:GL:BD 0.81959707 1
1 17210330 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.941;BRSQ=0.835;LDAF=0.8146;AVGPOST=0.9522;RSQ=0.8894;ERATE=0.0006;THETA=0.0027;AC=1789;AN=2184 GT:DS:GL:BD 0.81913918 1
1 17210441 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.861;LDAF=0.0453;AVGPOST=0.9761;RSQ=0.7930;ERATE=0.0029;THETA=0.0053;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 17210442 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.923;LDAF=0.0215;AVGPOST=0.9973;RSQ=0.9484;ERATE=0.0004;THETA=0.0013;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 17210447 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.720;LDAF=0.0249;AVGPOST=0.9861;RSQ=0.7681;ERATE=0.0061;THETA=0.0037;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 17210640 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.931;LDAF=0.0107;AVGPOST=0.9978;RSQ=0.9258;ERATE=0.0019;THETA=0.0017;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 17210650 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0385;AVGPOST=0.9982;RSQ=0.9810;ERATE=0.0004;THETA=0.0070;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 17210657 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.869;LDAF=0.0195;AVGPOST=0.9962;RSQ=0.9185;ERATE=0.0003;THETA=0.0081;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 17210661 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0215;AVGPOST=0.9986;RSQ=0.9732;ERATE=0.0003;THETA=0.0020;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 17210830 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.929;LDAF=0.0207;AVGPOST=0.9980;RSQ=0.9619;ERATE=0.0003;THETA=0.0039;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 17210935 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7740;ERATE=0.0005;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17211001 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0020;AVGPOST=0.9993;RSQ=0.8598;ERATE=0.0004;THETA=0.0119;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17211025 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0004;AVGPOST=0.9995;RSQ=0.4829;ERATE=0.0004;THETA=0.0091;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17211027 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5558;ERATE=0.0004;THETA=0.0064;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17211051 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.870;LDAF=0.0194;AVGPOST=0.9959;RSQ=0.9171;ERATE=0.0003;THETA=0.0054;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 17211058 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8120;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17211349 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.933;LDAF=0.0253;AVGPOST=0.9973;RSQ=0.9574;ERATE=0.0003;THETA=0.0040;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 17211422 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.863;LDAF=0.0032;AVGPOST=0.9986;RSQ=0.8208;ERATE=0.0003;THETA=0.0018;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17211452 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0020;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17211581 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0032;AVGPOST=0.9992;RSQ=0.8789;ERATE=0.0015;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 17211602 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.952;LDAF=0.0229;AVGPOST=0.9979;RSQ=0.9627;ERATE=0.0003;THETA=0.0017;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 17211616 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.963;LDAF=0.0371;AVGPOST=0.9957;RSQ=0.9548;ERATE=0.0004;THETA=0.0016;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 17211699 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9527;ERATE=0.0003;THETA=0.0071;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 17211757 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.982;LDAF=0.0353;AVGPOST=0.9982;RSQ=0.9791;ERATE=0.0003;THETA=0.0010;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 17211854 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.964;LDAF=0.0233;AVGPOST=0.9974;RSQ=0.9585;ERATE=0.0022;THETA=0.0018;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 17211930 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.853;LDAF=0.0704;AVGPOST=0.9813;RSQ=0.8882;ERATE=0.0038;THETA=0.0041;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 17212165 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.964;LDAF=0.0791;AVGPOST=0.9937;RSQ=0.9638;ERATE=0.0004;THETA=0.0028;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 17212316 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0066;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17212807 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.862;LDAF=0.0272;AVGPOST=0.9898;RSQ=0.8511;ERATE=0.0077;THETA=0.0008;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 17212860 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0097;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17212864 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17213093 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.955;LDAF=0.8696;AVGPOST=0.9913;RSQ=0.9701;ERATE=0.0005;THETA=0.0018;AC=1899;AN=2184 GT:DS:GL:BD 0.86950547 1
1 17213179 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0102;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17213289 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7131;ERATE=0.0004;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17213369 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.952;BRSQ=0.873;LDAF=0.2939;AVGPOST=0.9479;RSQ=0.8797;ERATE=0.0133;THETA=0.0043;AC=632;AN=2184 GT:DS:GL:BD 0.28937730 0
1 17213370 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6548;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17213387 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.824;LDAF=0.0089;AVGPOST=0.9961;RSQ=0.8221;ERATE=0.0008;THETA=0.0090;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 17213434 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4659;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17213436 . AG A 56 PASS INDEL;BAVGPOST=0.996;BRSQ=0.705;LDAF=0.0041;AVGPOST=0.9984;RSQ=0.8409;ERATE=0.0004;THETA=0.0014;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 17213562 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0030;AVGPOST=0.9990;RSQ=0.8544;ERATE=0.0004;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 17213576 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.868;LDAF=0.0043;AVGPOST=0.9989;RSQ=0.9029;ERATE=0.0003;THETA=0.0013;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 17213606 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.643;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6524;ERATE=0.0004;THETA=0.0045;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17213637 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.853;LDAF=0.0071;AVGPOST=0.9986;RSQ=0.9237;ERATE=0.0003;THETA=0.0054;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 17213748 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.635;LDAF=0.0043;AVGPOST=0.9977;RSQ=0.7705;ERATE=0.0005;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 17213859 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8191;ERATE=0.0005;THETA=0.0059;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17213883 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.955;LDAF=0.8766;AVGPOST=0.9874;RSQ=0.9543;ERATE=0.0017;THETA=0.0118;AC=1920;AN=2184 GT:DS:GL:BD 0.87912089 1
1 17214180 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.930;LDAF=0.8757;AVGPOST=0.9888;RSQ=0.9594;ERATE=0.0004;THETA=0.0078;AC=1910;AN=2184 GT:DS:GL:BD 0.87454212 1
1 17214384 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.817;LDAF=0.0554;AVGPOST=0.9823;RSQ=0.8672;ERATE=0.0005;THETA=0.0045;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 17214588 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.951;LDAF=0.8707;AVGPOST=0.9885;RSQ=0.9598;ERATE=0.0016;THETA=0.0026;AC=1906;AN=2184 GT:DS:GL:BD 0.87271065 1
1 17214683 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.856;LDAF=0.0040;AVGPOST=0.9984;RSQ=0.8539;ERATE=0.0004;THETA=0.0029;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 17215004 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.847;LDAF=0.9635;AVGPOST=0.9867;RSQ=0.8621;ERATE=0.0004;THETA=0.0039;AC=2112;AN=2184 GT:DS:GL:BD 0.96703297 1
1 17215015 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.836;LDAF=0.9638;AVGPOST=0.9866;RSQ=0.8562;ERATE=0.0004;THETA=0.0090;AC=2111;AN=2184 GT:DS:GL:BD 0.96657509 1
1 17215020 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.780;LDAF=0.9714;AVGPOST=0.9836;RSQ=0.7819;ERATE=0.0004;THETA=0.0028;AC=2124;AN=2184 GT:DS:GL:BD 0.97252744 1
1 17215027 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.794;LDAF=0.0033;AVGPOST=0.9985;RSQ=0.8370;ERATE=0.0004;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 17215084 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.503;LDAF=0.0034;AVGPOST=0.9970;RSQ=0.6456;ERATE=0.0003;THETA=0.0082;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17215102 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0055;AVGPOST=0.9988;RSQ=0.9185;ERATE=0.0003;THETA=0.0058;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 17215336 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0079;AVGPOST=0.9985;RSQ=0.9248;ERATE=0.0020;THETA=0.0013;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 17215380 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6362;ERATE=0.0003;THETA=0.0056;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17215441 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.829;LDAF=0.0315;AVGPOST=0.9926;RSQ=0.9064;ERATE=0.0005;THETA=0.0089;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 17215442 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.602;LDAF=0.0034;AVGPOST=0.9962;RSQ=0.5306;ERATE=0.0016;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17215464 . C CG 6170 PASS INDEL;BAVGPOST=0.774;BRSQ=0.541;LDAF=0.4931;AVGPOST=0.7764;RSQ=0.5804;ERATE=0.0404;THETA=0.0013;AC=1091;AN=2184 GT:DS:GL:BD 0.49954212 0
1 17215495 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.907;BRSQ=0.727;LDAF=0.2617;AVGPOST=0.9099;RSQ=0.7803;ERATE=0.0249;THETA=0.0011;AC=517;AN=2184 GT:DS:GL:BD 0.23672161 0
1 17215521 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.915;LDAF=0.0242;AVGPOST=0.9955;RSQ=0.9244;ERATE=0.0005;THETA=0.0051;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 17215526 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.916;LDAF=0.0205;AVGPOST=0.9957;RSQ=0.9218;ERATE=0.0004;THETA=0.0035;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 17215654 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.886;LDAF=0.1606;AVGPOST=0.9619;RSQ=0.8787;ERATE=0.0108;THETA=0.0039;AC=338;AN=2184 GT:DS:GL:BD 0.15476191 0
1 17215667 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.885;LDAF=0.0326;AVGPOST=0.9917;RSQ=0.8983;ERATE=0.0013;THETA=0.0082;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 17215908 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4360;ERATE=0.0004;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17215933 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.926;LDAF=0.0408;AVGPOST=0.9891;RSQ=0.8883;ERATE=0.0021;THETA=0.0011;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 17215982 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.960;BRSQ=0.847;LDAF=0.8492;AVGPOST=0.9324;RSQ=0.7939;ERATE=0.0079;THETA=0.0085;AC=1899;AN=2184 GT:DS:GL:BD 0.86950547 1
1 17216004 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.762;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.8543;ERATE=0.0003;THETA=0.0037;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17216010 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.613;LDAF=0.0241;AVGPOST=0.9781;RSQ=0.6448;ERATE=0.0067;THETA=0.0040;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 17216078 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.756;LDAF=0.0029;AVGPOST=0.9966;RSQ=0.5225;ERATE=0.0011;THETA=0.0051;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17216080 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.934;BRSQ=0.836;LDAF=0.2769;AVGPOST=0.9349;RSQ=0.8556;ERATE=0.0168;THETA=0.0075;AC=586;AN=2184 GT:DS:GL:BD 0.26831502 0
1 17216099 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.737;LDAF=0.0084;AVGPOST=0.9954;RSQ=0.7815;ERATE=0.0010;THETA=0.0051;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 17216132 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.930;LDAF=0.0268;AVGPOST=0.9966;RSQ=0.9544;ERATE=0.0003;THETA=0.0056;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 17216135 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.967;BRSQ=0.907;LDAF=0.7448;AVGPOST=0.9637;RSQ=0.9110;ERATE=0.0127;THETA=0.0043;AC=1627;AN=2184 GT:DS:GL:BD 0.74496335 1
1 17216145 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.937;LDAF=0.0206;AVGPOST=0.9972;RSQ=0.9511;ERATE=0.0003;THETA=0.0026;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 17216161 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5788;ERATE=0.0005;THETA=0.0057;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17216233 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.952;BRSQ=0.850;LDAF=0.1967;AVGPOST=0.9557;RSQ=0.8837;ERATE=0.0049;THETA=0.0048;AC=415;AN=2184 GT:DS:GL:BD 0.19001831 0
1 17216240 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0038;AVGPOST=0.9992;RSQ=0.9016;ERATE=0.0004;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 17216244 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.771;LDAF=0.0152;AVGPOST=0.9911;RSQ=0.7671;ERATE=0.0031;THETA=0.0017;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 17216250 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5598;ERATE=0.0003;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17216289 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.552;LDAF=0.0036;AVGPOST=0.9951;RSQ=0.4713;ERATE=0.0016;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17216292 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.673;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8333;ERATE=0.0004;THETA=0.0173;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17216306 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.822;LDAF=0.0047;AVGPOST=0.9967;RSQ=0.7588;ERATE=0.0003;THETA=0.0079;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 17216315 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.635;LDAF=0.0074;AVGPOST=0.9927;RSQ=0.5973;ERATE=0.0020;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 17216331 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.945;LDAF=0.7448;AVGPOST=0.9688;RSQ=0.9283;ERATE=0.0068;THETA=0.0092;AC=1631;AN=2184 GT:DS:GL:BD 0.74679488 1
1 17216406 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.7923;ERATE=0.0003;THETA=0.0021;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17216523 . A AT 1806 PASS INDEL;BAVGPOST=0.997;BRSQ=0.897;LDAF=0.0168;AVGPOST=0.9959;RSQ=0.9050;ERATE=0.0012;THETA=0.0011;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 17216577 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.907;LDAF=0.0397;AVGPOST=0.9929;RSQ=0.9264;ERATE=0.0016;THETA=0.0023;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 17216829 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.918;LDAF=0.1589;AVGPOST=0.9718;RSQ=0.9073;ERATE=0.0076;THETA=0.0017;AC=335;AN=2184 GT:DS:GL:BD 0.15338828 0
1 17216853 rs67524855 TC T 2242 PASS INDEL;BAVGPOST=0.963;BRSQ=0.695;LDAF=0.0778;AVGPOST=0.9460;RSQ=0.6782;ERATE=0.0335;THETA=0.0014;AC=123;AN=2184 GT:DS:GL:BD 0.05631868 0
1 17217306 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.0033;AVGPOST=0.9995;RSQ=0.9448;ERATE=0.0005;THETA=0.0060;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 17217426 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.772;LDAF=0.0037;AVGPOST=0.9968;RSQ=0.6543;ERATE=0.0024;THETA=0.0104;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17217601 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0039;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17217941 rs35100189 C CT 1972 PASS INDEL;BAVGPOST=0.489;BRSQ=0.121;LDAF=0.5036;AVGPOST=0.6030;RSQ=0.2584;ERATE=0.0433;THETA=0.0063;AC=995;AN=2184 GT:DS:GL:BD 0.45558608 0
1 17217992 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6652;ERATE=0.0005;THETA=0.0035;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17218002 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.439;LDAF=0.0076;AVGPOST=0.9891;RSQ=0.4354;ERATE=0.0030;THETA=0.0135;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 17218050 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.964;LDAF=0.0330;AVGPOST=0.9915;RSQ=0.9017;ERATE=0.0005;THETA=0.0051;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 17218085 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0210;AVGPOST=0.9989;RSQ=0.9779;ERATE=0.0003;THETA=0.0079;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 17218102 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.816;LDAF=0.0516;AVGPOST=0.9745;RSQ=0.7898;ERATE=0.0053;THETA=0.0018;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 17218154 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.757;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4286;ERATE=0.0004;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17218478 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.911;LDAF=0.7805;AVGPOST=0.9668;RSQ=0.9091;ERATE=0.0073;THETA=0.0010;AC=1714;AN=2184 GT:DS:GL:BD 0.78479856 1
1 17218895 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5205;ERATE=0.0004;THETA=0.0044;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17218905 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0248;AVGPOST=0.9980;RSQ=0.9674;ERATE=0.0004;THETA=0.0027;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 17218919 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.761;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6171;ERATE=0.0004;THETA=0.0040;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17219030 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.766;LDAF=0.0182;AVGPOST=0.9882;RSQ=0.7412;ERATE=0.0024;THETA=0.0101;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 17219068 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7835;ERATE=0.0019;THETA=0.0082;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17219190 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8216;ERATE=0.0003;THETA=0.0046;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17219305 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6088;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17219408 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.799;LDAF=0.0224;AVGPOST=0.9875;RSQ=0.7686;ERATE=0.0043;THETA=0.0059;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 17219461 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.635;LDAF=0.0205;AVGPOST=0.9833;RSQ=0.6903;ERATE=0.0040;THETA=0.0016;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 17219469 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7536;ERATE=0.0010;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17219483 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7131;ERATE=0.0004;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17219485 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.739;LDAF=0.0102;AVGPOST=0.9963;RSQ=0.8628;ERATE=0.0009;THETA=0.0045;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 17219522 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.922;LDAF=0.0239;AVGPOST=0.9959;RSQ=0.9389;ERATE=0.0004;THETA=0.0080;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 17219854 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0209;AVGPOST=0.9994;RSQ=0.9874;ERATE=0.0003;THETA=0.0026;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 17219859 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0105;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17219872 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.855;LDAF=0.0047;AVGPOST=0.9974;RSQ=0.7720;ERATE=0.0004;THETA=0.0022;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 17219893 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.873;LDAF=0.0079;AVGPOST=0.9949;RSQ=0.7235;ERATE=0.0019;THETA=0.0056;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 17219930 rs60340721 CCTGA C 90 PASS INDEL;BAVGPOST=0.994;BRSQ=0.750;LDAF=0.0163;AVGPOST=0.9867;RSQ=0.6587;ERATE=0.0075;THETA=0.0018;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 17220144 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.8711;AVGPOST=0.9870;RSQ=0.9559;ERATE=0.0004;THETA=0.0079;AC=1905;AN=2184 GT:DS:GL:BD 0.87225276 1
1 17220234 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5372;ERATE=0.0005;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17220319 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.782;LDAF=0.0473;AVGPOST=0.9776;RSQ=0.8061;ERATE=0.0067;THETA=0.0010;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 17220383 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.681;LDAF=0.0197;AVGPOST=0.9857;RSQ=0.7143;ERATE=0.0065;THETA=0.0020;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 17220522 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0218;AVGPOST=0.9989;RSQ=0.9825;ERATE=0.0004;THETA=0.0018;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 17220665 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.832;LDAF=0.0082;AVGPOST=0.9963;RSQ=0.8358;ERATE=0.0006;THETA=0.0029;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 17220704 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.937;LDAF=0.0293;AVGPOST=0.9941;RSQ=0.9192;ERATE=0.0008;THETA=0.0044;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 17220850 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0063;AVGPOST=0.9993;RSQ=0.9579;ERATE=0.0003;THETA=0.0037;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 17220930 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.917;LDAF=0.0228;AVGPOST=0.9982;RSQ=0.9644;ERATE=0.0005;THETA=0.0018;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 17221305 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0035;AVGPOST=0.9980;RSQ=0.7615;ERATE=0.0004;THETA=0.0027;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 17221306 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.833;LDAF=0.0106;AVGPOST=0.9959;RSQ=0.8453;ERATE=0.0025;THETA=0.0045;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 17221323 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.547;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4995;ERATE=0.0005;THETA=0.0105;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17221561 . A AT 352 PASS INDEL;BAVGPOST=0.981;BRSQ=0.667;LDAF=0.0271;AVGPOST=0.9811;RSQ=0.7304;ERATE=0.0045;THETA=0.0011;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 17221653 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.481;LDAF=0.0049;AVGPOST=0.9923;RSQ=0.4073;ERATE=0.0012;THETA=0.0042;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17221740 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17221765 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.790;LDAF=0.0028;AVGPOST=0.9980;RSQ=0.7032;ERATE=0.0005;THETA=0.0082;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17222007 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.703;LDAF=0.0042;AVGPOST=0.9975;RSQ=0.7397;ERATE=0.0012;THETA=0.0027;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 17222108 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0251;AVGPOST=0.9928;RSQ=0.8777;ERATE=0.0009;THETA=0.0070;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 17222175 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.650;LDAF=0.0090;AVGPOST=0.9932;RSQ=0.6867;ERATE=0.0007;THETA=0.0015;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 17222184 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.961;BRSQ=0.640;LDAF=0.0475;AVGPOST=0.9538;RSQ=0.6019;ERATE=0.0088;THETA=0.0066;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 17222193 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.655;LDAF=0.0063;AVGPOST=0.9935;RSQ=0.5420;ERATE=0.0006;THETA=0.0035;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 17222200 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.948;BRSQ=0.575;LDAF=0.0610;AVGPOST=0.9384;RSQ=0.5580;ERATE=0.0113;THETA=0.0083;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 17222208 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.628;LDAF=0.0025;AVGPOST=0.9972;RSQ=0.5342;ERATE=0.0006;THETA=0.0062;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17222243 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.774;BRSQ=0.588;LDAF=0.5975;AVGPOST=0.7725;RSQ=0.6216;ERATE=0.0238;THETA=0.0030;AC=1351;AN=2184 GT:DS:GL:BD 0.61858976 1
1 17222321 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.959;BRSQ=0.564;LDAF=0.0568;AVGPOST=0.9428;RSQ=0.5781;ERATE=0.0178;THETA=0.0012;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 17222652 . TC T 19782 PASS INDEL;BAVGPOST=0.963;BRSQ=0.899;LDAF=0.8018;AVGPOST=0.9460;RSQ=0.8773;ERATE=0.0076;THETA=0.0053;AC=1772;AN=2184 GT:DS:GL:BD 0.81135529 1
1 17222653 rs67606166 CT C 74971 PASS INDEL;BAVGPOST=0.975;BRSQ=0.919;LDAF=0.8350;AVGPOST=0.9778;RSQ=0.9410;ERATE=0.0008;THETA=0.0046;AC=1824;AN=2184 GT:DS:GL:BD 0.83516484 1
1 17222885 . AT A 696 PASS INDEL;BAVGPOST=0.993;BRSQ=0.719;LDAF=0.0206;AVGPOST=0.9894;RSQ=0.8069;ERATE=0.0008;THETA=0.0029;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 17223213 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8034;ERATE=0.0004;THETA=0.0025;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17223268 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.689;LDAF=0.0098;AVGPOST=0.9918;RSQ=0.6542;ERATE=0.0012;THETA=0.0047;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 17223301 rs66886282 CA C 2365 PASS INDEL;BAVGPOST=0.973;BRSQ=0.811;LDAF=0.0865;AVGPOST=0.9617;RSQ=0.7914;ERATE=0.0372;THETA=0.0203;AC=161;AN=2184 GT:DS:GL:BD 0.07371795 0
1 17223305 . TAC T 62 PASS INDEL;BAVGPOST=0.996;BRSQ=0.245;LDAF=0.0256;AVGPOST=0.9558;RSQ=0.2497;ERATE=0.0014;THETA=0.0070;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 17223496 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.695;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6186;ERATE=0.0003;THETA=0.0156;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17223569 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.854;LDAF=0.0144;AVGPOST=0.9943;RSQ=0.8462;ERATE=0.0008;THETA=0.0008;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 17223576 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.857;LDAF=0.0137;AVGPOST=0.9958;RSQ=0.8790;ERATE=0.0005;THETA=0.0036;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 17223618 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.967;LDAF=0.8724;AVGPOST=0.9937;RSQ=0.9783;ERATE=0.0008;THETA=0.0008;AC=1904;AN=2184 GT:DS:GL:BD 0.87179488 1
1 17223707 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.807;LDAF=0.0134;AVGPOST=0.9923;RSQ=0.7722;ERATE=0.0007;THETA=0.0014;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 17223791 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0096;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17223821 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.799;LDAF=0.0169;AVGPOST=0.9919;RSQ=0.7984;ERATE=0.0013;THETA=0.0054;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 17223929 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.954;LDAF=0.8739;AVGPOST=0.9863;RSQ=0.9478;ERATE=0.0025;THETA=0.0085;AC=1914;AN=2184 GT:DS:GL:BD 0.87637365 1
1 17223946 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.701;LDAF=0.0283;AVGPOST=0.9767;RSQ=0.6636;ERATE=0.0053;THETA=0.0042;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 17223980 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.678;LDAF=0.0074;AVGPOST=0.9922;RSQ=0.6169;ERATE=0.0004;THETA=0.0030;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 17223985 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7044;ERATE=0.0003;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17224819 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0029;AVGPOST=0.9988;RSQ=0.8108;ERATE=0.0004;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17224860 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.898;LDAF=0.0102;AVGPOST=0.9977;RSQ=0.9190;ERATE=0.0004;THETA=0.0010;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 17224864 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8333;ERATE=0.0003;THETA=0.0042;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17224924 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17225392 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.795;LDAF=0.0035;AVGPOST=0.9984;RSQ=0.7996;ERATE=0.0003;THETA=0.0047;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 17226445 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.801;LDAF=0.0046;AVGPOST=0.9958;RSQ=0.6358;ERATE=0.0013;THETA=0.0063;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 17226455 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.629;LDAF=0.0016;AVGPOST=0.9982;RSQ=0.4802;ERATE=0.0006;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17226505 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4343;ERATE=0.0004;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17226520 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.817;LDAF=0.0427;AVGPOST=0.9781;RSQ=0.7841;ERATE=0.0049;THETA=0.0023;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 17226627 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.733;LDAF=0.0021;AVGPOST=0.9966;RSQ=0.3664;ERATE=0.0004;THETA=0.0036;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17226648 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.901;BRSQ=0.728;LDAF=0.7923;AVGPOST=0.8950;RSQ=0.7283;ERATE=0.0099;THETA=0.0033;AC=1793;AN=2184 GT:DS:GL:BD 0.82097071 1
1 17226657 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.473;LDAF=0.0073;AVGPOST=0.9913;RSQ=0.4772;ERATE=0.0010;THETA=0.0056;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 17226693 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.954;LDAF=0.8498;AVGPOST=0.9859;RSQ=0.9537;ERATE=0.0007;THETA=0.0006;AC=1860;AN=2184 GT:DS:GL:BD 0.85164833 1
1 17226841 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.873;LDAF=0.0237;AVGPOST=0.9952;RSQ=0.9213;ERATE=0.0004;THETA=0.0037;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 17226933 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5979;ERATE=0.0004;THETA=0.0062;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17226956 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.939;LDAF=0.0340;AVGPOST=0.9929;RSQ=0.9175;ERATE=0.0004;THETA=0.0091;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 17227044 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.692;LDAF=0.0157;AVGPOST=0.9905;RSQ=0.7436;ERATE=0.0018;THETA=0.0037;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 17227064 . T TG 91 PASS INDEL;BAVGPOST=0.998;BRSQ=0.590;LDAF=0.0030;AVGPOST=0.9969;RSQ=0.6221;ERATE=0.0006;THETA=0.0033;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17227071 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0004;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17227140 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9403;ERATE=0.0003;THETA=0.0057;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 17227150 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.756;LDAF=0.0039;AVGPOST=0.9946;RSQ=0.4855;ERATE=0.0009;THETA=0.0016;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17227153 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.752;LDAF=0.0015;AVGPOST=0.9982;RSQ=0.5030;ERATE=0.0006;THETA=0.0023;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17227165 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6171;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17227183 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.883;LDAF=0.9418;AVGPOST=0.9838;RSQ=0.8963;ERATE=0.0004;THETA=0.0043;AC=2058;AN=2184 GT:DS:GL:BD 0.94230771 1
1 17227338 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.977;LDAF=0.8782;AVGPOST=0.9935;RSQ=0.9765;ERATE=0.0007;THETA=0.0008;AC=1917;AN=2184 GT:DS:GL:BD 0.87774724 1
1 17227445 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0264;AVGPOST=0.9988;RSQ=0.9797;ERATE=0.0004;THETA=0.0019;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 17227452 rs58601092 CAT C 5331 PASS INDEL;BAVGPOST=0.940;BRSQ=0.753;LDAF=0.1512;AVGPOST=0.9288;RSQ=0.7414;ERATE=0.0422;THETA=0.0041;AC=268;AN=2184 GT:DS:GL:BD 0.12271062 0
1 17227597 . TG T 4562 PASS INDEL;BAVGPOST=0.972;BRSQ=0.823;LDAF=0.0332;AVGPOST=0.9904;RSQ=0.8866;ERATE=0.0006;THETA=0.0037;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 17227616 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9456;ERATE=0.0004;THETA=0.0028;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 17227627 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.851;LDAF=0.0355;AVGPOST=0.9896;RSQ=0.8863;ERATE=0.0008;THETA=0.0067;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 17227664 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.832;LDAF=0.0025;AVGPOST=0.9992;RSQ=0.8882;ERATE=0.0005;THETA=0.0024;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17227686 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0043;AVGPOST=0.9993;RSQ=0.9209;ERATE=0.0010;THETA=0.0039;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 17227773 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.519;LDAF=0.0082;AVGPOST=0.9908;RSQ=0.5603;ERATE=0.0030;THETA=0.0095;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 17227792 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7055;ERATE=0.0008;THETA=0.0071;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17227949 . GC G 237 PASS INDEL;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0028;AVGPOST=0.9988;RSQ=0.8209;ERATE=0.0005;THETA=0.0064;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17227972 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0263;AVGPOST=0.9989;RSQ=0.9827;ERATE=0.0003;THETA=0.0066;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 17228016 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.966;LDAF=0.8502;AVGPOST=0.9897;RSQ=0.9675;ERATE=0.0006;THETA=0.0078;AC=1858;AN=2184 GT:DS:GL:BD 0.85073262 1
1 17228131 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.855;LDAF=0.0566;AVGPOST=0.9861;RSQ=0.8964;ERATE=0.0006;THETA=0.0073;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 17228138 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.925;BRSQ=0.803;LDAF=0.7365;AVGPOST=0.9070;RSQ=0.7927;ERATE=0.0290;THETA=0.0114;AC=1655;AN=2184 GT:DS:GL:BD 0.75778389 1
1 17228257 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.955;LDAF=0.8757;AVGPOST=0.9922;RSQ=0.9704;ERATE=0.0008;THETA=0.0146;AC=1911;AN=2184 GT:DS:GL:BD 0.87500000 1
1 17228662 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.869;LDAF=0.0190;AVGPOST=0.9926;RSQ=0.8607;ERATE=0.0007;THETA=0.0021;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 17228719 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.769;LDAF=0.0018;AVGPOST=0.9987;RSQ=0.7066;ERATE=0.0006;THETA=0.0070;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17228764 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8496;ERATE=0.0003;THETA=0.0032;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17228790 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.948;LDAF=0.8763;AVGPOST=0.9894;RSQ=0.9605;ERATE=0.0009;THETA=0.0049;AC=1914;AN=2184 GT:DS:GL:BD 0.87637365 1
1 17228819 . A AG 541 PASS INDEL;BAVGPOST=0.998;BRSQ=0.743;LDAF=0.0033;AVGPOST=0.9980;RSQ=0.7490;ERATE=0.0017;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17229094 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8366;ERATE=0.0004;THETA=0.0138;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17229095 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.963;LDAF=0.0210;AVGPOST=0.9983;RSQ=0.9674;ERATE=0.0003;THETA=0.0010;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 17229591 rs112049170 C CTT 9273 PASS INDEL;BAVGPOST=0.983;BRSQ=0.898;LDAF=0.1119;AVGPOST=0.9695;RSQ=0.8568;ERATE=0.0580;THETA=0.0073;AC=217;AN=2184 GT:DS:GL:BD 0.09935898 0
1 17229726 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0019;AVGPOST=0.9993;RSQ=0.8409;ERATE=0.0004;THETA=0.0042;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17229765 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.934;LDAF=0.0774;AVGPOST=0.9823;RSQ=0.8969;ERATE=0.0054;THETA=0.0117;AC=159;AN=2184 GT:DS:GL:BD 0.07280220 0
1 17230615 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.556;LDAF=0.0032;AVGPOST=0.9953;RSQ=0.3656;ERATE=0.0013;THETA=0.0047;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17230716 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.683;LDAF=0.0060;AVGPOST=0.9969;RSQ=0.7995;ERATE=0.0003;THETA=0.0028;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 17230748 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.765;LDAF=0.0523;AVGPOST=0.9831;RSQ=0.8649;ERATE=0.0016;THETA=0.0064;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 17230801 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.872;LDAF=0.0095;AVGPOST=0.9977;RSQ=0.9038;ERATE=0.0005;THETA=0.0074;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 17231190 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0049;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17231214 . AG A 6865 PASS INDEL;BAVGPOST=0.947;BRSQ=0.768;LDAF=0.1755;AVGPOST=0.9240;RSQ=0.7497;ERATE=0.0665;THETA=0.0040;AC=325;AN=2184 GT:DS:GL:BD 0.14880952 0
1 17231276 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.890;LDAF=0.0124;AVGPOST=0.9971;RSQ=0.9038;ERATE=0.0009;THETA=0.0091;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 17231539 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6359;ERATE=0.0003;THETA=0.0070;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17231563 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.787;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.8046;ERATE=0.0003;THETA=0.0059;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17231575 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9999;AVGPOST=0.9999;RSQ=0.0499;ERATE=0.0003;THETA=0.0061;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 17231687 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.969;LDAF=0.8542;AVGPOST=0.9914;RSQ=0.9714;ERATE=0.0012;THETA=0.0054;AC=1866;AN=2184 GT:DS:GL:BD 0.85439563 1
1 17231696 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17231724 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.988;LDAF=0.8277;AVGPOST=0.9918;RSQ=0.9775;ERATE=0.0007;THETA=0.0015;AC=1807;AN=2184 GT:DS:GL:BD 0.82738096 1
1 17231727 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0260;AVGPOST=0.9973;RSQ=0.9615;ERATE=0.0004;THETA=0.0090;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 17231813 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6265;ERATE=0.0003;THETA=0.0107;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17231862 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9119;ERATE=0.0003;THETA=0.0116;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 17231895 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.937;BRSQ=0.653;LDAF=0.1294;AVGPOST=0.9059;RSQ=0.6353;ERATE=0.0307;THETA=0.0039;AC=207;AN=2184 GT:DS:GL:BD 0.09478022 0
1 17231898 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.669;LDAF=0.0423;AVGPOST=0.9590;RSQ=0.5985;ERATE=0.0005;THETA=0.0050;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 17231951 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.987;LDAF=0.8568;AVGPOST=0.9968;RSQ=0.9889;ERATE=0.0004;THETA=0.0005;AC=1870;AN=2184 GT:DS:GL:BD 0.85622710 1
1 17231953 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.975;LDAF=0.0465;AVGPOST=0.9957;RSQ=0.9619;ERATE=0.0006;THETA=0.0074;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 17232083 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.374;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6262;ERATE=0.0005;THETA=0.0046;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17232091 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.963;LDAF=0.0080;AVGPOST=0.9981;RSQ=0.9237;ERATE=0.0022;THETA=0.0028;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 17232118 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.900;LDAF=0.0268;AVGPOST=0.9921;RSQ=0.8861;ERATE=0.0033;THETA=0.0036;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 17232228 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0019;AVGPOST=0.9996;RSQ=0.9119;ERATE=0.0003;THETA=0.0041;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17232280 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.987;LDAF=0.8521;AVGPOST=0.9956;RSQ=0.9858;ERATE=0.0007;THETA=0.0056;AC=1859;AN=2184 GT:DS:GL:BD 0.85119045 1
1 17232299 rs77595361 TA T 79382 PASS INDEL;BAVGPOST=0.935;BRSQ=0.824;LDAF=0.7245;AVGPOST=0.9242;RSQ=0.8346;ERATE=0.0282;THETA=0.0050;AC=1620;AN=2184 GT:DS:GL:BD 0.74175823 1
1 17232467 rs33925999 CTGTTTT C 138431 PASS INDEL;BAVGPOST=0.966;BRSQ=0.896;LDAF=0.7676;AVGPOST=0.9494;RSQ=0.8760;ERATE=0.0250;THETA=0.0098;AC=1705;AN=2184 GT:DS:GL:BD 0.78067768 1
1 17232559 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.929;LDAF=0.0321;AVGPOST=0.9937;RSQ=0.9280;ERATE=0.0005;THETA=0.0093;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 17232560 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.8464;AVGPOST=0.9954;RSQ=0.9849;ERATE=0.0004;THETA=0.0049;AC=1849;AN=2184 GT:DS:GL:BD 0.84661174 1
1 17232730 . TTTTG T 508 PASS INDEL;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0128;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17233563 rs112627037 G GC 41924 PASS INDEL;BAVGPOST=0.967;BRSQ=0.861;LDAF=0.3573;AVGPOST=0.9593;RSQ=0.8687;ERATE=0.0069;THETA=0.0020;AC=756;AN=2184 GT:DS:GL:BD 0.34615386 0
1 17235079 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.920;LDAF=0.0482;AVGPOST=0.9917;RSQ=0.9360;ERATE=0.0011;THETA=0.0057;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 17235333 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.692;LDAF=0.0126;AVGPOST=0.9911;RSQ=0.7222;ERATE=0.0037;THETA=0.0033;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 17235690 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.587;LDAF=0.0085;AVGPOST=0.9908;RSQ=0.5943;ERATE=0.0017;THETA=0.0028;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 17235750 rs35805029 GTATACA G 10261 PASS INDEL;BAVGPOST=0.982;BRSQ=0.881;LDAF=0.0612;AVGPOST=0.9792;RSQ=0.8570;ERATE=0.0033;THETA=0.0014;AC=122;AN=2184 GT:DS:GL:BD 0.05586081 0
1 17235768 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.924;BRSQ=0.851;LDAF=0.7853;AVGPOST=0.9493;RSQ=0.8849;ERATE=0.0048;THETA=0.0099;AC=1721;AN=2184 GT:DS:GL:BD 0.78800368 1
1 17235803 rs60749197 TAC T 39006 PASS INDEL;BAVGPOST=0.828;BRSQ=0.595;LDAF=0.5505;AVGPOST=0.8287;RSQ=0.6381;ERATE=0.0205;THETA=0.0085;AC=1209;AN=2184 GT:DS:GL:BD 0.55357140 1
1 17236017 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.923;LDAF=0.0702;AVGPOST=0.9764;RSQ=0.8617;ERATE=0.0092;THETA=0.0010;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 17236113 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.894;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9277;ERATE=0.0006;THETA=0.0014;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 17236231 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0004;THETA=0.0047;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17236310 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.844;LDAF=0.0316;AVGPOST=0.9922;RSQ=0.8905;ERATE=0.0009;THETA=0.0071;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 17236359 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.927;BRSQ=0.816;LDAF=0.8348;AVGPOST=0.9604;RSQ=0.8857;ERATE=0.0009;THETA=0.0023;AC=1832;AN=2184 GT:DS:GL:BD 0.83882785 1
1 17236365 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.649;LDAF=0.0029;AVGPOST=0.9959;RSQ=0.4238;ERATE=0.0011;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17236375 rs57106653 TA T 18867 PASS INDEL;BAVGPOST=0.942;BRSQ=0.784;LDAF=0.3513;AVGPOST=0.9181;RSQ=0.7565;ERATE=0.0084;THETA=0.0036;AC=750;AN=2184 GT:DS:GL:BD 0.34340659 0
1 17236386 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.918;LDAF=0.0546;AVGPOST=0.9923;RSQ=0.9453;ERATE=0.0006;THETA=0.0079;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 17236425 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0037;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17236477 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0240;AVGPOST=0.9968;RSQ=0.9518;ERATE=0.0003;THETA=0.0112;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 17236505 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.802;LDAF=0.0054;AVGPOST=0.9975;RSQ=0.8234;ERATE=0.0013;THETA=0.0063;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 17236560 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17236623 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7444;ERATE=0.0003;THETA=0.0043;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17236700 rs72232622 C CA 128 PASS INDEL;BAVGPOST=0.985;BRSQ=0.596;LDAF=0.0212;AVGPOST=0.9778;RSQ=0.5651;ERATE=0.0071;THETA=0.0105;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 17236703 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.881;LDAF=0.0064;AVGPOST=0.9982;RSQ=0.9037;ERATE=0.0003;THETA=0.0020;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 17237056 . TG T 1006 PASS INDEL;BAVGPOST=0.998;BRSQ=0.909;LDAF=0.0112;AVGPOST=0.9968;RSQ=0.8928;ERATE=0.0003;THETA=0.0010;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 17237058 . GT G 1047 PASS INDEL;BAVGPOST=0.998;BRSQ=0.909;LDAF=0.0111;AVGPOST=0.9972;RSQ=0.9051;ERATE=0.0003;THETA=0.0009;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 17237071 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.906;LDAF=0.0473;AVGPOST=0.9875;RSQ=0.8869;ERATE=0.0103;THETA=0.0063;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 17237090 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.926;LDAF=0.7201;AVGPOST=0.9646;RSQ=0.9268;ERATE=0.0248;THETA=0.0037;AC=1577;AN=2184 GT:DS:GL:BD 0.72206962 1
1 17237148 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0094;AVGPOST=0.9978;RSQ=0.9179;ERATE=0.0014;THETA=0.0089;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 17237204 . T TG 34 PASS INDEL;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6122;ERATE=0.0004;THETA=0.0037;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17237235 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0035;AVGPOST=0.9958;RSQ=0.5017;ERATE=0.0009;THETA=0.0074;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17237403 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.892;LDAF=0.8795;AVGPOST=0.9533;RSQ=0.8149;ERATE=0.0047;THETA=0.0007;AC=1947;AN=2184 GT:DS:GL:BD 0.89148355 1
1 17237488 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.6202;ERATE=0.0004;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17237502 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8326;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17237504 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8350;ERATE=0.0004;THETA=0.0044;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17237505 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.898;LDAF=0.0363;AVGPOST=0.9933;RSQ=0.9275;ERATE=0.0013;THETA=0.0007;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 17237543 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.967;LDAF=0.8688;AVGPOST=0.9919;RSQ=0.9724;ERATE=0.0009;THETA=0.0048;AC=1897;AN=2184 GT:DS:GL:BD 0.86858976 1
1 17237547 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.737;LDAF=0.0185;AVGPOST=0.9880;RSQ=0.7327;ERATE=0.0035;THETA=0.0032;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 17237717 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.676;LDAF=0.0073;AVGPOST=0.9945;RSQ=0.7412;ERATE=0.0005;THETA=0.0009;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 17237728 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5413;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17237828 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.952;LDAF=0.8303;AVGPOST=0.9903;RSQ=0.9705;ERATE=0.0010;THETA=0.0008;AC=1814;AN=2184 GT:DS:GL:BD 0.83058608 1
1 17237859 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.954;LDAF=0.8323;AVGPOST=0.9896;RSQ=0.9695;ERATE=0.0009;THETA=0.0011;AC=1819;AN=2184 GT:DS:GL:BD 0.83287543 1
1 17237909 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.734;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.6969;ERATE=0.0006;THETA=0.0042;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17237941 . GC G 33510 PASS INDEL;BAVGPOST=0.967;BRSQ=0.889;LDAF=0.8217;AVGPOST=0.9547;RSQ=0.8742;ERATE=0.0060;THETA=0.0034;AC=1814;AN=2184 GT:DS:GL:BD 0.83058608 1
1 17237982 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.980;LDAF=0.8331;AVGPOST=0.9920;RSQ=0.9767;ERATE=0.0009;THETA=0.0018;AC=1818;AN=2184 GT:DS:GL:BD 0.83241761 1
1 17238015 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17238065 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0042;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17238192 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.889;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9233;ERATE=0.0006;THETA=0.0111;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17238309 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.3832;ERATE=0.0004;THETA=0.0038;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17238365 rs67713867 GTTAC G 205 PASS INDEL;BAVGPOST=0.998;BRSQ=0.897;LDAF=0.0077;AVGPOST=0.9975;RSQ=0.8621;ERATE=0.0039;THETA=0.0013;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 17238473 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.854;LDAF=0.0095;AVGPOST=0.9965;RSQ=0.8522;ERATE=0.0007;THETA=0.0018;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 17238561 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.925;LDAF=0.0236;AVGPOST=0.9973;RSQ=0.9540;ERATE=0.0006;THETA=0.0024;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 17238574 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.540;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.6039;ERATE=0.0006;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17238656 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.599;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.6933;ERATE=0.0004;THETA=0.0024;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17238715 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.889;LDAF=0.0044;AVGPOST=0.9978;RSQ=0.8079;ERATE=0.0005;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 17238840 . C CCCTT 7246 PASS INDEL;BAVGPOST=0.994;BRSQ=0.895;LDAF=0.0290;AVGPOST=0.9943;RSQ=0.9247;ERATE=0.0016;THETA=0.0007;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 17238902 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.780;LDAF=0.0402;AVGPOST=0.9816;RSQ=0.8303;ERATE=0.0030;THETA=0.0023;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 17238936 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7262;ERATE=0.0005;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17238940 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0224;AVGPOST=0.9973;RSQ=0.9563;ERATE=0.0004;THETA=0.0058;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 17239258 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0231;AVGPOST=0.9982;RSQ=0.9712;ERATE=0.0003;THETA=0.0050;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 17239289 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.920;LDAF=0.0790;AVGPOST=0.9839;RSQ=0.9058;ERATE=0.0029;THETA=0.0043;AC=167;AN=2184 GT:DS:GL:BD 0.07646520 0
1 17239380 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0042;AVGPOST=0.9995;RSQ=0.9381;ERATE=0.0003;THETA=0.0014;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 17239468 . CTT C 432 PASS INDEL;BAVGPOST=0.999;BRSQ=0.837;LDAF=0.0050;AVGPOST=0.9969;RSQ=0.7396;ERATE=0.0013;THETA=0.0014;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 17239508 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.802;LDAF=0.0042;AVGPOST=0.9992;RSQ=0.9256;ERATE=0.0003;THETA=0.0016;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 17239865 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.952;BRSQ=0.867;LDAF=0.6818;AVGPOST=0.9298;RSQ=0.8270;ERATE=0.0173;THETA=0.0179;AC=1492;AN=2184 GT:DS:GL:BD 0.68315017 1
1 17240188 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.867;LDAF=0.0164;AVGPOST=0.9944;RSQ=0.8625;ERATE=0.0010;THETA=0.0029;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 17240192 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.878;LDAF=0.0385;AVGPOST=0.9952;RSQ=0.9474;ERATE=0.0005;THETA=0.0047;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 17240221 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5715;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17240236 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0023;AVGPOST=0.9984;RSQ=0.7398;ERATE=0.0004;THETA=0.0076;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17240280 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.624;LDAF=0.0172;AVGPOST=0.9894;RSQ=0.7617;ERATE=0.0017;THETA=0.0010;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 17240308 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0213;AVGPOST=0.9985;RSQ=0.9717;ERATE=0.0003;THETA=0.0056;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 17240398 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.930;BRSQ=0.745;LDAF=0.3472;AVGPOST=0.9070;RSQ=0.7227;ERATE=0.0077;THETA=0.0016;AC=728;AN=2184 GT:DS:GL:BD 0.33333334 0
1 17240437 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.897;BRSQ=0.696;LDAF=0.5547;AVGPOST=0.8576;RSQ=0.6430;ERATE=0.0247;THETA=0.0035;AC=1196;AN=2184 GT:DS:GL:BD 0.54761904 1
1 17240454 . CG C 28 PASS INDEL;BAVGPOST=0.998;BRSQ=0.695;LDAF=0.0106;AVGPOST=0.9821;RSQ=0.3398;ERATE=0.0006;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 17240481 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.339;LDAF=0.0215;AVGPOST=0.9740;RSQ=0.5130;ERATE=0.0021;THETA=0.0008;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 17240496 . GCCC G 90 PASS INDEL;BAVGPOST=0.994;BRSQ=0.368;LDAF=0.0071;AVGPOST=0.9891;RSQ=0.3116;ERATE=0.0012;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17240551 rs36055848 TCCCCGCCCCGTGGCGGGGACG T 7445 PASS INDEL;BAVGPOST=0.592;BRSQ=0.162;LDAF=0.3315;AVGPOST=0.6383;RSQ=0.2930;ERATE=0.0278;THETA=0.0007;AC=458;AN=2184 GT:DS:GL:BD 0.20970696 0
1 17240562 . T TCC 120 PASS INDEL;BAVGPOST=0.915;BRSQ=0.116;LDAF=0.1031;AVGPOST=0.8336;RSQ=0.2431;ERATE=0.0069;THETA=0.0008;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 17240594 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.953;BRSQ=0.459;LDAF=0.0569;AVGPOST=0.9487;RSQ=0.6015;ERATE=0.0036;THETA=0.0056;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 17240624 . CGCGCGAAGGT C 2049 PASS INDEL;BAVGPOST=0.813;BRSQ=0.164;LDAF=0.1702;AVGPOST=0.7690;RSQ=0.3193;ERATE=0.0155;THETA=0.0068;AC=159;AN=2184 GT:DS:GL:BD 0.07280220 0
1 17240703 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.249;LDAF=0.0089;AVGPOST=0.9875;RSQ=0.3981;ERATE=0.0015;THETA=0.0014;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 17240757 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.498;LDAF=0.0114;AVGPOST=0.9856;RSQ=0.4666;ERATE=0.0017;THETA=0.0016;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 17240764 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.900;BRSQ=0.656;LDAF=0.2058;AVGPOST=0.9245;RSQ=0.7668;ERATE=0.0034;THETA=0.0065;AC=426;AN=2184 GT:DS:GL:BD 0.19505495 0
1 17240806 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.925;BRSQ=0.722;LDAF=0.3388;AVGPOST=0.9150;RSQ=0.7372;ERATE=0.0030;THETA=0.0047;AC=718;AN=2184 GT:DS:GL:BD 0.32875457 0
1 17240858 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.909;BRSQ=0.684;LDAF=0.3317;AVGPOST=0.9325;RSQ=0.7890;ERATE=0.0008;THETA=0.0061;AC=715;AN=2184 GT:DS:GL:BD 0.32738096 0
1 17240868 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.327;LDAF=0.0069;AVGPOST=0.9882;RSQ=0.2449;ERATE=0.0018;THETA=0.0037;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17241234 rs33912654 CA C 65579 PASS INDEL;BAVGPOST=0.935;BRSQ=0.799;LDAF=0.8276;AVGPOST=0.9486;RSQ=0.8693;ERATE=0.0029;THETA=0.0008;AC=1825;AN=2184 GT:DS:GL:BD 0.83562273 1
1 17241239 rs66839753 TG T 62839 PASS INDEL;BAVGPOST=0.934;BRSQ=0.799;LDAF=0.8314;AVGPOST=0.9541;RSQ=0.8847;ERATE=0.0006;THETA=0.0164;AC=1826;AN=2184 GT:DS:GL:BD 0.83608061 1
1 17241262 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.924;LDAF=0.8120;AVGPOST=0.9570;RSQ=0.8979;ERATE=0.0013;THETA=0.0009;AC=1780;AN=2184 GT:DS:GL:BD 0.81501830 1
1 17241263 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.965;BRSQ=0.920;LDAF=0.8115;AVGPOST=0.9558;RSQ=0.8963;ERATE=0.0005;THETA=0.0077;AC=1779;AN=2184 GT:DS:GL:BD 0.81456041 1
1 17241279 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.911;LDAF=0.8595;AVGPOST=0.9802;RSQ=0.9387;ERATE=0.0005;THETA=0.0017;AC=1883;AN=2184 GT:DS:GL:BD 0.86217946 1
1 17241334 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.888;LDAF=0.8541;AVGPOST=0.9719;RSQ=0.9099;ERATE=0.0029;THETA=0.0055;AC=1875;AN=2184 GT:DS:GL:BD 0.85851645 1
1 17241341 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.730;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5441;ERATE=0.0005;THETA=0.0063;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17241579 rs68125552 CA C 22647 PASS INDEL;BAVGPOST=0.928;BRSQ=0.766;LDAF=0.3266;AVGPOST=0.9280;RSQ=0.7915;ERATE=0.0189;THETA=0.0006;AC=699;AN=2184 GT:DS:GL:BD 0.32005495 0
1 17241774 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7917;ERATE=0.0003;THETA=0.0042;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17241843 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7457;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17241951 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.514;LDAF=0.0050;AVGPOST=0.9939;RSQ=0.5289;ERATE=0.0013;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 17242281 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8410;ERATE=0.0004;THETA=0.0040;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17242308 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9133;ERATE=0.0006;THETA=0.0029;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 17242310 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0027;AVGPOST=0.9995;RSQ=0.9179;ERATE=0.0005;THETA=0.0071;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 17242317 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8577;ERATE=0.0003;THETA=0.0087;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17242356 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.777;LDAF=0.0092;AVGPOST=0.9888;RSQ=0.5836;ERATE=0.0007;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 17242456 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.719;LDAF=0.0296;AVGPOST=0.9788;RSQ=0.7289;ERATE=0.0007;THETA=0.0071;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 17242507 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.962;LDAF=0.0362;AVGPOST=0.9972;RSQ=0.9723;ERATE=0.0003;THETA=0.0059;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 17242515 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6960;ERATE=0.0005;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17242700 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.891;LDAF=0.0437;AVGPOST=0.9876;RSQ=0.8940;ERATE=0.0020;THETA=0.0011;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 17242876 rs67154637 AG A 1325 PASS INDEL;BAVGPOST=0.982;BRSQ=0.822;LDAF=0.0472;AVGPOST=0.9869;RSQ=0.8904;ERATE=0.0015;THETA=0.0012;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 17242922 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.723;LDAF=0.0077;AVGPOST=0.9940;RSQ=0.6684;ERATE=0.0007;THETA=0.0019;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 17242943 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5981;ERATE=0.0004;THETA=0.0036;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17242999 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.743;LDAF=0.0222;AVGPOST=0.9844;RSQ=0.7345;ERATE=0.0010;THETA=0.0022;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 17243016 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0024;AVGPOST=0.9986;RSQ=0.7666;ERATE=0.0005;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17243035 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.778;LDAF=0.0095;AVGPOST=0.9955;RSQ=0.8063;ERATE=0.0014;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 17243076 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.866;LDAF=0.0634;AVGPOST=0.9851;RSQ=0.8994;ERATE=0.0011;THETA=0.0013;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 17243134 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.748;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8278;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17243232 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.738;LDAF=0.0123;AVGPOST=0.9908;RSQ=0.7290;ERATE=0.0011;THETA=0.0007;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 17243325 . ACT A 49 PASS INDEL;BAVGPOST=1.000;BRSQ=0.764;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5114;ERATE=0.0004;THETA=0.0063;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17243476 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0211;AVGPOST=0.9968;RSQ=0.9366;ERATE=0.0003;THETA=0.0003;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 17243480 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.712;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.5205;ERATE=0.0005;THETA=0.0039;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17243488 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0030;AVGPOST=0.9967;RSQ=0.5646;ERATE=0.0008;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17243557 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.922;BRSQ=0.771;LDAF=0.8160;AVGPOST=0.9259;RSQ=0.8005;ERATE=0.0165;THETA=0.0082;AC=1818;AN=2184 GT:DS:GL:BD 0.83241761 1
1 17244852 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.822;LDAF=0.0066;AVGPOST=0.9965;RSQ=0.7876;ERATE=0.0006;THETA=0.0020;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 17244933 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.950;LDAF=0.8671;AVGPOST=0.9844;RSQ=0.9448;ERATE=0.0017;THETA=0.0018;AC=1896;AN=2184 GT:DS:GL:BD 0.86813188 1
1 17244962 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9019;ERATE=0.0004;THETA=0.0068;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17245060 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.692;LDAF=0.0266;AVGPOST=0.9849;RSQ=0.7777;ERATE=0.0008;THETA=0.0016;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 17245139 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.762;LDAF=0.0056;AVGPOST=0.9984;RSQ=0.8783;ERATE=0.0005;THETA=0.0010;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 17245146 rs66477461 AT A 116 PASS INDEL;BAVGPOST=0.979;BRSQ=0.501;LDAF=0.0271;AVGPOST=0.9782;RSQ=0.6903;ERATE=0.0019;THETA=0.0010;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 17245210 . T TG 221 PASS INDEL;BAVGPOST=0.992;BRSQ=0.680;LDAF=0.0185;AVGPOST=0.9811;RSQ=0.5728;ERATE=0.0061;THETA=0.0044;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 17245233 rs68022839 G GT 10094 PASS INDEL;BAVGPOST=0.683;BRSQ=0.431;LDAF=0.4949;AVGPOST=0.6897;RSQ=0.4766;ERATE=0.0440;THETA=0.0006;AC=1070;AN=2184 GT:DS:GL:BD 0.48992673 0
1 17245238 rs111427666 TG T 46433 PASS INDEL;BAVGPOST=0.959;BRSQ=0.844;LDAF=0.8524;AVGPOST=0.9577;RSQ=0.8613;ERATE=0.0075;THETA=0.0034;AC=1882;AN=2184 GT:DS:GL:BD 0.86172163 1
1 17245241 . T TTG 738 PASS INDEL;BAVGPOST=0.996;BRSQ=0.769;LDAF=0.0078;AVGPOST=0.9959;RSQ=0.7961;ERATE=0.0006;THETA=0.0024;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 17245260 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.815;LDAF=0.0589;AVGPOST=0.9793;RSQ=0.8481;ERATE=0.0041;THETA=0.0080;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 17245487 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.928;LDAF=0.0399;AVGPOST=0.9976;RSQ=0.9736;ERATE=0.0005;THETA=0.0043;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 17245496 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.894;LDAF=0.0061;AVGPOST=0.9965;RSQ=0.7747;ERATE=0.0007;THETA=0.0009;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 17245541 . TA T 18 PASS INDEL;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6200;ERATE=0.0005;THETA=0.0053;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17245647 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.762;LDAF=0.0173;AVGPOST=0.9876;RSQ=0.7220;ERATE=0.0040;THETA=0.0043;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 17245720 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.858;LDAF=0.0162;AVGPOST=0.9922;RSQ=0.7976;ERATE=0.0045;THETA=0.0012;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 17245735 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.960;LDAF=0.0505;AVGPOST=0.9903;RSQ=0.9248;ERATE=0.0011;THETA=0.0024;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 17245885 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.877;LDAF=0.0374;AVGPOST=0.9869;RSQ=0.8678;ERATE=0.0010;THETA=0.0028;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 17246171 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.956;LDAF=0.0355;AVGPOST=0.9979;RSQ=0.9771;ERATE=0.0004;THETA=0.0040;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 17246184 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.970;LDAF=0.0539;AVGPOST=0.9952;RSQ=0.9619;ERATE=0.0020;THETA=0.0096;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 17246313 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.6119;ERATE=0.0005;THETA=0.0021;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17246587 rs35331284 AT A 39447 PASS INDEL;BAVGPOST=0.916;BRSQ=0.759;LDAF=0.5001;AVGPOST=0.8820;RSQ=0.7237;ERATE=0.0404;THETA=0.0027;AC=1072;AN=2184 GT:DS:GL:BD 0.49084249 0
1 17246614 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17246644 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.914;LDAF=0.8302;AVGPOST=0.9571;RSQ=0.8811;ERATE=0.0011;THETA=0.0007;AC=1815;AN=2184 GT:DS:GL:BD 0.83104396 1
1 17246666 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.676;LDAF=0.0037;AVGPOST=0.9952;RSQ=0.4366;ERATE=0.0011;THETA=0.0022;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17246678 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9215;ERATE=0.0003;THETA=0.0056;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17246715 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5392;ERATE=0.0005;THETA=0.0045;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17246934 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.614;LDAF=0.0121;AVGPOST=0.9915;RSQ=0.7257;ERATE=0.0011;THETA=0.0010;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 17246972 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7061;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17247160 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.844;LDAF=0.0036;AVGPOST=0.9991;RSQ=0.8983;ERATE=0.0003;THETA=0.0015;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 17247181 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.873;LDAF=0.0040;AVGPOST=0.9987;RSQ=0.8650;ERATE=0.0004;THETA=0.0030;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 17247190 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.699;LDAF=0.0176;AVGPOST=0.9809;RSQ=0.6037;ERATE=0.0019;THETA=0.0007;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 17247399 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.652;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4740;ERATE=0.0004;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17247506 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7973;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17247614 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.797;LDAF=0.0024;AVGPOST=0.9981;RSQ=0.6680;ERATE=0.0005;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17247631 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.702;LDAF=0.0403;AVGPOST=0.9699;RSQ=0.7151;ERATE=0.0088;THETA=0.0007;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 17247668 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0030;AVGPOST=0.9974;RSQ=0.6890;ERATE=0.0014;THETA=0.0035;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17247761 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0211;AVGPOST=0.9982;RSQ=0.9590;ERATE=0.0004;THETA=0.0132;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 17247920 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.644;LDAF=0.0127;AVGPOST=0.9846;RSQ=0.5396;ERATE=0.0023;THETA=0.0096;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 17248051 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.953;LDAF=0.0245;AVGPOST=0.9971;RSQ=0.9541;ERATE=0.0009;THETA=0.0003;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 17248099 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17248104 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5994;ERATE=0.0003;THETA=0.0051;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17248189 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0247;AVGPOST=0.9984;RSQ=0.9754;ERATE=0.0004;THETA=0.0009;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 17248200 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8974;ERATE=0.0006;THETA=0.0041;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17248430 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9282;ERATE=0.0006;THETA=0.0020;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17248480 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7591;ERATE=0.0004;THETA=0.0038;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17248500 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.964;BRSQ=0.880;LDAF=0.4844;AVGPOST=0.9518;RSQ=0.8703;ERATE=0.0267;THETA=0.0045;AC=1052;AN=2184 GT:DS:GL:BD 0.48168498 0
1 17248506 . T TC 318 PASS INDEL;BAVGPOST=0.992;BRSQ=0.653;LDAF=0.0137;AVGPOST=0.9920;RSQ=0.7554;ERATE=0.0012;THETA=0.0009;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 17248511 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.911;LDAF=0.0067;AVGPOST=0.9991;RSQ=0.9362;ERATE=0.0007;THETA=0.0008;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 17248532 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9999;AVGPOST=0.9998;RSQ=0.0748;ERATE=0.0003;THETA=0.0015;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 17248618 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0032;AVGPOST=0.9992;RSQ=0.8819;ERATE=0.0016;THETA=0.0027;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 17248790 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0216;AVGPOST=0.9986;RSQ=0.9745;ERATE=0.0003;THETA=0.0031;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 17248797 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.970;LDAF=0.2135;AVGPOST=0.9824;RSQ=0.9475;ERATE=0.0059;THETA=0.0011;AC=459;AN=2184 GT:DS:GL:BD 0.21016483 0
1 17248823 . A AG 19 PASS INDEL;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4059;ERATE=0.0006;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17248878 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6904;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17248881 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17248885 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.965;LDAF=0.8669;AVGPOST=0.9877;RSQ=0.9579;ERATE=0.0025;THETA=0.0042;AC=1892;AN=2184 GT:DS:GL:BD 0.86630034 1
1 17248952 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6464;ERATE=0.0003;THETA=0.0010;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 17249063 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0035;AVGPOST=0.9998;RSQ=0.9756;ERATE=0.0003;THETA=0.0043;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 17249096 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8190;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17249098 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0013;AVGPOST=0.9998;RSQ=0.9427;ERATE=0.0004;THETA=0.0078;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17249099 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.9124;ERATE=0.0006;THETA=0.0076;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 17249128 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0726;AVGPOST=0.9997;RSQ=0.9982;ERATE=0.0003;THETA=0.0031;AC=159;AN=2184 GT:DS:GL:BD 0.07280220 0
1 17249138 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0726;AVGPOST=0.9998;RSQ=0.9985;ERATE=0.0003;THETA=0.0005;AC=159;AN=2184 GT:DS:GL:BD 0.07280220 0
1 17249170 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0018;AVGPOST=0.9999;RSQ=0.9762;ERATE=0.0006;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17249200 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17249203 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17249212 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17249219 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0013;AVGPOST=0.9999;RSQ=0.9551;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17249272 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17249308 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0023;AVGPOST=0.9992;RSQ=0.8925;ERATE=0.0004;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17249486 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0041;AVGPOST=1.0000;RSQ=0.9947;ERATE=0.0003;THETA=0.0030;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 17249487 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.978;LDAF=0.0601;AVGPOST=0.9982;RSQ=0.9869;ERATE=0.0004;THETA=0.0005;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 17249488 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.0539;AVGPOST=0.9988;RSQ=0.9903;ERATE=0.0003;THETA=0.0012;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 17249514 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0041;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0014;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 17249515 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17249535 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9612;ERATE=0.0003;THETA=0.0021;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 17249542 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.965;LDAF=0.0363;AVGPOST=0.9985;RSQ=0.9823;ERATE=0.0003;THETA=0.0006;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 17249546 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.966;LDAF=0.0383;AVGPOST=0.9980;RSQ=0.9784;ERATE=0.0004;THETA=0.0109;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 17249804 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17249858 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0113;AVGPOST=0.9982;RSQ=0.9358;ERATE=0.0006;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 17249892 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.942;LDAF=0.0945;AVGPOST=0.9952;RSQ=0.9748;ERATE=0.0011;THETA=0.0006;AC=207;AN=2184 GT:DS:GL:BD 0.09478022 0
1 17249913 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7049;ERATE=0.0003;THETA=0.0039;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17250004 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0018;AVGPOST=0.9988;RSQ=0.6813;ERATE=0.0008;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17250008 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.8019;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17250141 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.966;LDAF=0.0795;AVGPOST=0.9928;RSQ=0.9632;ERATE=0.0006;THETA=0.0006;AC=172;AN=2184 GT:DS:GL:BD 0.07875458 0
1 17250142 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17250161 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.915;LDAF=0.0897;AVGPOST=0.9933;RSQ=0.9657;ERATE=0.0005;THETA=0.0025;AC=197;AN=2184 GT:DS:GL:BD 0.09020147 0
1 17250311 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.869;LDAF=0.0641;AVGPOST=0.9878;RSQ=0.9189;ERATE=0.0008;THETA=0.0024;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 17250357 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17250373 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.884;LDAF=0.0843;AVGPOST=0.9862;RSQ=0.9310;ERATE=0.0008;THETA=0.0007;AC=185;AN=2184 GT:DS:GL:BD 0.08470696 0
1 17250422 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0058;AVGPOST=0.9982;RSQ=0.8842;ERATE=0.0004;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 17250426 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17250573 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.967;LDAF=0.8770;AVGPOST=0.9926;RSQ=0.9736;ERATE=0.0006;THETA=0.0010;AC=1914;AN=2184 GT:DS:GL:BD 0.87637365 1
1 17250732 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.922;LDAF=0.0088;AVGPOST=0.9987;RSQ=0.9520;ERATE=0.0006;THETA=0.0048;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 17250754 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.981;LDAF=0.0127;AVGPOST=0.9995;RSQ=0.9865;ERATE=0.0005;THETA=0.0021;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 17250783 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0097;AVGPOST=0.9995;RSQ=0.9829;ERATE=0.0003;THETA=0.0025;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 17250812 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17250836 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.982;LDAF=0.3611;AVGPOST=0.9926;RSQ=0.9736;ERATE=0.0091;THETA=0.0011;AC=784;AN=2184 GT:DS:GL:BD 0.35897437 0
1 17250856 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9420;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17250899 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0048;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17250945 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0055;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 17250991 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0975;AVGPOST=0.9979;RSQ=0.9906;ERATE=0.0006;THETA=0.0007;AC=213;AN=2184 GT:DS:GL:BD 0.09752747 0
1 17251017 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0027;AVGPOST=0.9999;RSQ=0.9841;ERATE=0.0004;THETA=0.0019;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 17251056 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0712;AVGPOST=0.9982;RSQ=0.9895;ERATE=0.0004;THETA=0.0058;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 17251092 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17251204 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8590;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17251282 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.915;LDAF=0.0101;AVGPOST=0.9988;RSQ=0.9508;ERATE=0.0011;THETA=0.0044;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 17251314 . T TGA 194 PASS INDEL;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6508;ERATE=0.0006;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17251409 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.964;BRSQ=0.889;LDAF=0.3064;AVGPOST=0.9578;RSQ=0.8726;ERATE=0.0106;THETA=0.0004;AC=665;AN=2184 GT:DS:GL:BD 0.30448717 0
1 17251450 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7491;ERATE=0.0003;THETA=0.0056;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17251593 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0083;AVGPOST=0.9993;RSQ=0.9631;ERATE=0.0006;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 17251791 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0119;AVGPOST=0.9986;RSQ=0.9539;ERATE=0.0005;THETA=0.0027;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 17251886 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0041;AVGPOST=0.9999;RSQ=0.9841;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 17252025 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8405;ERATE=0.0005;THETA=0.0040;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17252040 . AG A 771 PASS INDEL;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0103;AVGPOST=0.9953;RSQ=0.8245;ERATE=0.0005;THETA=0.0008;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 17252286 . A AG 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6942;ERATE=0.0004;THETA=0.0129;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17252290 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0066;AVGPOST=0.9967;RSQ=0.8381;ERATE=0.0004;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 17252295 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7452;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17252298 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.912;LDAF=0.0051;AVGPOST=0.9989;RSQ=0.9143;ERATE=0.0003;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 17252392 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.865;LDAF=0.0347;AVGPOST=0.9888;RSQ=0.8812;ERATE=0.0010;THETA=0.0015;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 17252425 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9501;ERATE=0.0004;THETA=0.0030;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 17252462 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.813;LDAF=0.0261;AVGPOST=0.9877;RSQ=0.7974;ERATE=0.0038;THETA=0.0006;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 17252644 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.628;LDAF=0.0076;AVGPOST=0.9891;RSQ=0.4755;ERATE=0.0013;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 17252665 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7782;ERATE=0.0004;THETA=0.0023;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17252876 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5526;ERATE=0.0004;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17252998 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.926;LDAF=0.0091;AVGPOST=0.9964;RSQ=0.8648;ERATE=0.0004;THETA=0.0019;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 17253129 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.930;LDAF=0.0820;AVGPOST=0.9902;RSQ=0.9527;ERATE=0.0030;THETA=0.0029;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 17253270 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.0020;AVGPOST=0.9985;RSQ=0.7129;ERATE=0.0006;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17253274 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0068;AVGPOST=0.9993;RSQ=0.9606;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 17253407 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0036;AVGPOST=0.9994;RSQ=0.9283;ERATE=0.0003;THETA=0.0037;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 17253421 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17253481 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9526;ERATE=0.0003;THETA=0.0058;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17253603 . C CAG 16413 PASS INDEL;BAVGPOST=0.997;BRSQ=0.983;LDAF=0.0826;AVGPOST=0.9976;RSQ=0.9868;ERATE=0.0004;THETA=0.0015;AC=181;AN=2184 GT:DS:GL:BD 0.08287546 0
1 17253716 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0005;THETA=0.0055;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17253801 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17253889 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.864;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9809;ERATE=0.0003;THETA=0.0015;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17254061 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.903;LDAF=0.0157;AVGPOST=0.9939;RSQ=0.8442;ERATE=0.0075;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 17254096 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6616;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17254513 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.898;LDAF=0.0061;AVGPOST=0.9980;RSQ=0.8791;ERATE=0.0009;THETA=0.0011;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 17254525 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6817;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17254538 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8220;ERATE=0.0003;THETA=0.0027;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17254630 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.810;LDAF=0.0217;AVGPOST=0.9926;RSQ=0.8639;ERATE=0.0037;THETA=0.0028;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 17254865 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.893;LDAF=0.0129;AVGPOST=0.9957;RSQ=0.8633;ERATE=0.0003;THETA=0.0010;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 17254959 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.899;LDAF=0.0320;AVGPOST=0.9939;RSQ=0.9239;ERATE=0.0020;THETA=0.0050;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 17255001 . T TTCCC 373 PASS INDEL;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0035;AVGPOST=0.9983;RSQ=0.7931;ERATE=0.0006;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 17255155 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.770;LDAF=0.0054;AVGPOST=0.9936;RSQ=0.5514;ERATE=0.0006;THETA=0.0015;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 17255181 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.861;LDAF=0.0571;AVGPOST=0.9813;RSQ=0.8599;ERATE=0.0006;THETA=0.0088;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 17255197 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.861;LDAF=0.0555;AVGPOST=0.9836;RSQ=0.8846;ERATE=0.0006;THETA=0.0017;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 17255231 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.900;BRSQ=0.668;LDAF=0.2699;AVGPOST=0.8898;RSQ=0.7073;ERATE=0.0121;THETA=0.0007;AC=562;AN=2184 GT:DS:GL:BD 0.25732601 0
1 17255259 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.955;BRSQ=0.810;LDAF=0.1546;AVGPOST=0.9452;RSQ=0.8231;ERATE=0.0021;THETA=0.0016;AC=321;AN=2184 GT:DS:GL:BD 0.14697802 0
1 17255265 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.946;BRSQ=0.815;LDAF=0.3003;AVGPOST=0.9376;RSQ=0.8264;ERATE=0.0090;THETA=0.0071;AC=647;AN=2184 GT:DS:GL:BD 0.29624543 0
1 17255279 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.702;LDAF=0.0049;AVGPOST=0.9969;RSQ=0.7288;ERATE=0.0016;THETA=0.0011;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 17255304 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0080;AVGPOST=0.9978;RSQ=0.8890;ERATE=0.0005;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 17255360 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5766;ERATE=0.0004;THETA=0.0048;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17255382 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.529;LDAF=0.0221;AVGPOST=0.9761;RSQ=0.5662;ERATE=0.0048;THETA=0.0007;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 17255385 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.826;LDAF=0.0399;AVGPOST=0.9834;RSQ=0.8486;ERATE=0.0004;THETA=0.0050;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 17255408 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.812;LDAF=0.0772;AVGPOST=0.9714;RSQ=0.8495;ERATE=0.0016;THETA=0.0038;AC=161;AN=2184 GT:DS:GL:BD 0.07371795 0
1 17255436 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.907;LDAF=0.8205;AVGPOST=0.9543;RSQ=0.8702;ERATE=0.0036;THETA=0.0064;AC=1800;AN=2184 GT:DS:GL:BD 0.82417583 1
1 17255523 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.906;LDAF=0.0093;AVGPOST=0.9967;RSQ=0.8670;ERATE=0.0006;THETA=0.0084;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 17255537 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5581;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17255539 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.923;LDAF=0.0701;AVGPOST=0.9932;RSQ=0.9575;ERATE=0.0005;THETA=0.0020;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 17255566 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.929;LDAF=0.0862;AVGPOST=0.9837;RSQ=0.9167;ERATE=0.0040;THETA=0.0012;AC=181;AN=2184 GT:DS:GL:BD 0.08287546 0
1 17255626 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.922;LDAF=0.0700;AVGPOST=0.9941;RSQ=0.9629;ERATE=0.0009;THETA=0.0032;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 17255627 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.952;BRSQ=0.660;LDAF=0.0878;AVGPOST=0.9314;RSQ=0.6429;ERATE=0.0301;THETA=0.0022;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 17255662 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.939;LDAF=0.8731;AVGPOST=0.9880;RSQ=0.9534;ERATE=0.0004;THETA=0.0065;AC=1910;AN=2184 GT:DS:GL:BD 0.87454212 1
1 17255724 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.982;LDAF=0.0503;AVGPOST=0.9977;RSQ=0.9818;ERATE=0.0004;THETA=0.0022;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 17255938 rs66852759 TC T 46372 PASS INDEL;BAVGPOST=0.960;BRSQ=0.903;LDAF=0.7571;AVGPOST=0.9368;RSQ=0.8631;ERATE=0.0188;THETA=0.0023;AC=1688;AN=2184 GT:DS:GL:BD 0.77289379 1
1 17255940 . CT C 7680 PASS INDEL;BAVGPOST=0.836;BRSQ=0.702;LDAF=0.6212;AVGPOST=0.8023;RSQ=0.7060;ERATE=0.0335;THETA=0.0029;AC=1461;AN=2184 GT:DS:GL:BD 0.66895604 1
1 17255951 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.788;LDAF=0.0686;AVGPOST=0.9644;RSQ=0.7764;ERATE=0.0113;THETA=0.0015;AC=131;AN=2184 GT:DS:GL:BD 0.05998169 0
1 17255978 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0023;AVGPOST=0.9978;RSQ=0.5751;ERATE=0.0003;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17256063 rs66780576 G GA 590 PASS INDEL;BAVGPOST=0.989;BRSQ=0.787;LDAF=0.0274;AVGPOST=0.9817;RSQ=0.7222;ERATE=0.0114;THETA=0.0061;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 17256313 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.892;LDAF=0.3203;AVGPOST=0.9502;RSQ=0.8516;ERATE=0.0101;THETA=0.0017;AC=689;AN=2184 GT:DS:GL:BD 0.31547618 0
1 17256406 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0001;AVGPOST=0.9998;RSQ=0.0498;ERATE=0.0003;THETA=0.0019;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 17256559 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17256578 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9585;ERATE=0.0004;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 17256592 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.925;LDAF=0.0175;AVGPOST=0.9973;RSQ=0.9449;ERATE=0.0006;THETA=0.0044;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 17256608 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0029;AVGPOST=0.9987;RSQ=0.8340;ERATE=0.0020;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17256626 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.928;LDAF=0.0137;AVGPOST=0.9961;RSQ=0.8918;ERATE=0.0045;THETA=0.0013;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 17256645 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.950;LDAF=0.0067;AVGPOST=0.9989;RSQ=0.9396;ERATE=0.0004;THETA=0.0009;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 17256676 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8061;ERATE=0.0003;THETA=0.0023;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17256783 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8967;ERATE=0.0004;THETA=0.0027;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17256807 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0091;AVGPOST=0.9989;RSQ=0.9529;ERATE=0.0003;THETA=0.0014;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 17256810 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0096;AVGPOST=0.9985;RSQ=0.9442;ERATE=0.0005;THETA=0.0020;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 17256850 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.877;LDAF=0.0168;AVGPOST=0.9940;RSQ=0.8523;ERATE=0.0045;THETA=0.0053;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 17256896 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.669;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8057;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17257059 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6084;ERATE=0.0005;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17257325 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.734;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.7081;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17257370 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.907;LDAF=0.0153;AVGPOST=0.9945;RSQ=0.8549;ERATE=0.0023;THETA=0.0032;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 17257704 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.987;LDAF=0.0715;AVGPOST=0.9952;RSQ=0.9723;ERATE=0.0008;THETA=0.0011;AC=157;AN=2184 GT:DS:GL:BD 0.07188645 0
1 17257744 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0045;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17257753 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=0.9999;RSQ=0.0999;ERATE=0.0003;THETA=0.0029;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 17257768 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0050;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17257819 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0004;THETA=0.0053;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17257820 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17257840 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0220;AVGPOST=0.9999;RSQ=0.9969;ERATE=0.0003;THETA=0.0002;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 17257858 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0004;THETA=0.0043;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17257912 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17258182 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0068;AVGPOST=0.9992;RSQ=0.9584;ERATE=0.0004;THETA=0.0030;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 17258307 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.809;LDAF=0.0026;AVGPOST=0.9991;RSQ=0.8681;ERATE=0.0004;THETA=0.0015;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 17258315 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.967;LDAF=0.1288;AVGPOST=0.9897;RSQ=0.9669;ERATE=0.0004;THETA=0.0007;AC=279;AN=2184 GT:DS:GL:BD 0.12774725 0
1 17258327 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.965;LDAF=0.1239;AVGPOST=0.9899;RSQ=0.9668;ERATE=0.0004;THETA=0.0007;AC=268;AN=2184 GT:DS:GL:BD 0.12271062 0
1 17258453 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.684;LDAF=0.0144;AVGPOST=0.9868;RSQ=0.6481;ERATE=0.0009;THETA=0.0012;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 17258476 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.845;LDAF=0.0340;AVGPOST=0.9927;RSQ=0.9166;ERATE=0.0004;THETA=0.0010;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 17258479 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9531;ERATE=0.0003;THETA=0.0050;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17258557 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7572;ERATE=0.0003;THETA=0.0052;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17258862 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.610;LDAF=0.0060;AVGPOST=0.9936;RSQ=0.5713;ERATE=0.0005;THETA=0.0070;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 17259011 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.801;LDAF=0.0069;AVGPOST=0.9946;RSQ=0.7135;ERATE=0.0019;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 17259049 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.954;LDAF=0.0209;AVGPOST=0.9979;RSQ=0.9611;ERATE=0.0004;THETA=0.0077;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 17259142 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.706;LDAF=0.0225;AVGPOST=0.9856;RSQ=0.7536;ERATE=0.0006;THETA=0.0010;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 17259156 . AGGT A 118 PASS INDEL;BAVGPOST=0.999;BRSQ=0.825;LDAF=0.0036;AVGPOST=0.9958;RSQ=0.5231;ERATE=0.0004;THETA=0.0062;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17259228 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5979;ERATE=0.0003;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17259361 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.911;LDAF=0.0098;AVGPOST=0.9986;RSQ=0.9440;ERATE=0.0011;THETA=0.0012;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 17259446 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17259563 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0068;AVGPOST=0.9962;RSQ=0.7740;ERATE=0.0018;THETA=0.0058;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 17259623 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0024;AVGPOST=0.9992;RSQ=0.8577;ERATE=0.0008;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17259715 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0046;AVGPOST=0.9984;RSQ=0.8585;ERATE=0.0004;THETA=0.0025;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 17259736 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.953;LDAF=0.1340;AVGPOST=0.9874;RSQ=0.9554;ERATE=0.0008;THETA=0.0057;AC=293;AN=2184 GT:DS:GL:BD 0.13415751 0
1 17259894 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.916;LDAF=0.0388;AVGPOST=0.9911;RSQ=0.9063;ERATE=0.0007;THETA=0.0007;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 17259943 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.950;LDAF=0.0357;AVGPOST=0.9935;RSQ=0.9314;ERATE=0.0004;THETA=0.0005;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 17260022 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.832;LDAF=0.0079;AVGPOST=0.9948;RSQ=0.7313;ERATE=0.0018;THETA=0.0009;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 17260210 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.914;LDAF=0.1317;AVGPOST=0.9874;RSQ=0.9566;ERATE=0.0006;THETA=0.0004;AC=290;AN=2184 GT:DS:GL:BD 0.13278389 0
1 17260298 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.957;LDAF=0.1331;AVGPOST=0.9884;RSQ=0.9586;ERATE=0.0010;THETA=0.0051;AC=292;AN=2184 GT:DS:GL:BD 0.13369964 0
1 17260665 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0069;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17260948 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17261335 rs9435791 TTC T 29005 PASS INDEL;BAVGPOST=0.951;BRSQ=0.823;LDAF=0.3419;AVGPOST=0.9266;RSQ=0.7707;ERATE=0.0169;THETA=0.0039;AC=722;AN=2184 GT:DS:GL:BD 0.33058608 0
1 17261345 . T TC 2059 PASS INDEL;BAVGPOST=0.998;BRSQ=0.952;LDAF=0.0218;AVGPOST=0.9920;RSQ=0.8442;ERATE=0.0011;THETA=0.0014;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 17261373 . AT A 1996 PASS INDEL;BAVGPOST=0.992;BRSQ=0.910;LDAF=0.0316;AVGPOST=0.9937;RSQ=0.9211;ERATE=0.0005;THETA=0.0025;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 17261428 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.806;LDAF=0.0036;AVGPOST=0.9958;RSQ=0.5423;ERATE=0.0009;THETA=0.0052;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17261476 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.949;LDAF=0.0394;AVGPOST=0.9894;RSQ=0.8920;ERATE=0.0004;THETA=0.0009;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 17261513 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0045;AVGPOST=0.9981;RSQ=0.8435;ERATE=0.0005;THETA=0.0031;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 17261538 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0027;AVGPOST=0.9977;RSQ=0.6646;ERATE=0.0005;THETA=0.0063;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17261686 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.818;LDAF=0.0125;AVGPOST=0.9918;RSQ=0.7297;ERATE=0.0035;THETA=0.0017;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 17261687 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6392;ERATE=0.0004;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17261750 . TCA T 73 PASS INDEL;BAVGPOST=0.988;BRSQ=0.560;LDAF=0.0166;AVGPOST=0.9824;RSQ=0.5885;ERATE=0.0092;THETA=0.0096;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 17261909 . T TTTTTG 1180 PASS INDEL;BAVGPOST=0.998;BRSQ=0.800;LDAF=0.0056;AVGPOST=0.9970;RSQ=0.7765;ERATE=0.0004;THETA=0.0014;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 17261927 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6010;ERATE=0.0003;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17261990 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.875;BRSQ=0.706;LDAF=0.3367;AVGPOST=0.8623;RSQ=0.7056;ERATE=0.0317;THETA=0.0027;AC=689;AN=2184 GT:DS:GL:BD 0.31547618 0
1 17262008 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.843;BRSQ=0.698;LDAF=0.3450;AVGPOST=0.8191;RSQ=0.6648;ERATE=0.0293;THETA=0.0052;AC=699;AN=2184 GT:DS:GL:BD 0.32005495 0
1 17262061 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.859;LDAF=0.0148;AVGPOST=0.9930;RSQ=0.8242;ERATE=0.0003;THETA=0.0082;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 17262071 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.860;LDAF=0.0300;AVGPOST=0.9878;RSQ=0.8471;ERATE=0.0013;THETA=0.0012;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 17262149 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.785;LDAF=0.0375;AVGPOST=0.9783;RSQ=0.7568;ERATE=0.0021;THETA=0.0060;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 17262154 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5661;ERATE=0.0004;THETA=0.0115;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17262214 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.938;BRSQ=0.851;LDAF=0.7406;AVGPOST=0.9310;RSQ=0.8498;ERATE=0.0152;THETA=0.0032;AC=1638;AN=2184 GT:DS:GL:BD 0.75000000 1
1 17262263 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8821;ERATE=0.0007;THETA=0.0016;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17262323 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.774;LDAF=0.0302;AVGPOST=0.9800;RSQ=0.7564;ERATE=0.0022;THETA=0.0014;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 17262474 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.866;LDAF=0.0071;AVGPOST=0.9966;RSQ=0.8130;ERATE=0.0036;THETA=0.0028;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 17262579 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0044;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17262668 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0034;AVGPOST=0.9989;RSQ=0.8929;ERATE=0.0006;THETA=0.0029;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 17262705 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17262912 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.732;LDAF=0.0022;AVGPOST=0.9981;RSQ=0.6484;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17262916 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8302;ERATE=0.0005;THETA=0.0028;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17263127 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0064;AVGPOST=0.9986;RSQ=0.9041;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 17263128 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6902;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17263189 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.730;LDAF=0.0044;AVGPOST=0.9984;RSQ=0.8544;ERATE=0.0009;THETA=0.0054;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 17263207 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6228;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17263214 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.828;LDAF=0.0100;AVGPOST=0.9959;RSQ=0.8332;ERATE=0.0005;THETA=0.0020;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 17263290 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.977;LDAF=0.0870;AVGPOST=0.9921;RSQ=0.9633;ERATE=0.0004;THETA=0.0065;AC=186;AN=2184 GT:DS:GL:BD 0.08516484 0
1 17263462 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.961;LDAF=0.0479;AVGPOST=0.9955;RSQ=0.9623;ERATE=0.0006;THETA=0.0007;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 17263486 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9471;ERATE=0.0004;THETA=0.0028;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 17263516 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0063;AVGPOST=0.9992;RSQ=0.9639;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 17263604 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.801;LDAF=0.0080;AVGPOST=0.9954;RSQ=0.7572;ERATE=0.0006;THETA=0.0017;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 17263662 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.958;LDAF=0.0539;AVGPOST=0.9941;RSQ=0.9521;ERATE=0.0004;THETA=0.0037;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 17263719 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.965;BRSQ=0.843;LDAF=0.1189;AVGPOST=0.9670;RSQ=0.8815;ERATE=0.0018;THETA=0.0050;AC=251;AN=2184 GT:DS:GL:BD 0.11492674 0
1 17263792 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.909;LDAF=0.0033;AVGPOST=0.9978;RSQ=0.7725;ERATE=0.0003;THETA=0.0029;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 17264092 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0056;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17264201 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0020;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 17264239 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.920;LDAF=0.0127;AVGPOST=0.9973;RSQ=0.9231;ERATE=0.0011;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 17264296 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.957;BRSQ=0.883;LDAF=0.2225;AVGPOST=0.9422;RSQ=0.8647;ERATE=0.0254;THETA=0.0017;AC=450;AN=2184 GT:DS:GL:BD 0.20604396 0
1 17264365 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.902;LDAF=0.0096;AVGPOST=0.9977;RSQ=0.9124;ERATE=0.0010;THETA=0.0029;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 17264535 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.974;LDAF=0.0878;AVGPOST=0.9910;RSQ=0.9578;ERATE=0.0006;THETA=0.0059;AC=188;AN=2184 GT:DS:GL:BD 0.08608059 0
1 17264677 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.365;LDAF=0.9702;AVGPOST=0.9585;RSQ=0.4498;ERATE=0.0084;THETA=0.0056;AC=2149;AN=2184 GT:DS:GL:BD 0.98397434 1
1 17264793 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.794;LDAF=0.0673;AVGPOST=0.9704;RSQ=0.8079;ERATE=0.0107;THETA=0.0046;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 17264863 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.907;LDAF=0.4559;AVGPOST=0.9718;RSQ=0.9156;ERATE=0.0118;THETA=0.0003;AC=994;AN=2184 GT:DS:GL:BD 0.45512819 0
1 17264869 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7300;ERATE=0.0004;THETA=0.0030;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17264882 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6404;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17264890 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.929;LDAF=0.0218;AVGPOST=0.9962;RSQ=0.9316;ERATE=0.0006;THETA=0.0089;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 17264920 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.957;BRSQ=0.853;LDAF=0.2886;AVGPOST=0.9538;RSQ=0.8658;ERATE=0.0056;THETA=0.0005;AC=620;AN=2184 GT:DS:GL:BD 0.28388280 0
1 17264939 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.964;BRSQ=0.868;LDAF=0.2991;AVGPOST=0.9520;RSQ=0.8608;ERATE=0.0142;THETA=0.0043;AC=637;AN=2184 GT:DS:GL:BD 0.29166666 0
1 17265041 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.822;LDAF=0.0095;AVGPOST=0.9969;RSQ=0.8723;ERATE=0.0003;THETA=0.0015;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 17265111 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.640;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.6982;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17265171 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.954;BRSQ=0.844;LDAF=0.4553;AVGPOST=0.9424;RSQ=0.8417;ERATE=0.0160;THETA=0.0182;AC=1005;AN=2184 GT:DS:GL:BD 0.46016484 0
1 17265185 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0041;AVGPOST=0.9999;RSQ=0.9841;ERATE=0.0003;THETA=0.0032;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 17265366 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.972;LDAF=0.3576;AVGPOST=0.9894;RSQ=0.9617;ERATE=0.0063;THETA=0.0096;AC=778;AN=2184 GT:DS:GL:BD 0.35622710 0
1 17265416 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0184;AVGPOST=0.9992;RSQ=0.9830;ERATE=0.0003;THETA=0.0007;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 17265427 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.9176;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 17265507 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.762;LDAF=0.0171;AVGPOST=0.9930;RSQ=0.8233;ERATE=0.0020;THETA=0.0007;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 17265560 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.912;LDAF=0.3655;AVGPOST=0.9374;RSQ=0.7889;ERATE=0.0078;THETA=0.0008;AC=782;AN=2184 GT:DS:GL:BD 0.35805860 0
1 17265601 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.956;LDAF=0.0221;AVGPOST=0.9929;RSQ=0.8653;ERATE=0.0008;THETA=0.0010;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 17265704 . T TGGGGC 347 PASS INDEL;BAVGPOST=0.878;BRSQ=0.096;LDAF=0.1259;AVGPOST=0.8043;RSQ=0.2815;ERATE=0.0109;THETA=0.0005;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 17265778 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.839;LDAF=0.0489;AVGPOST=0.9923;RSQ=0.9304;ERATE=0.0005;THETA=0.0116;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 17265843 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.597;LDAF=0.0025;AVGPOST=0.9970;RSQ=0.4650;ERATE=0.0005;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17265961 rs67916997 CA C 85 PASS INDEL;BAVGPOST=0.995;BRSQ=0.451;LDAF=0.0088;AVGPOST=0.9878;RSQ=0.4169;ERATE=0.0016;THETA=0.0014;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 17266044 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0185;AVGPOST=0.9982;RSQ=0.9578;ERATE=0.0004;THETA=0.0040;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 17266130 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.747;LDAF=0.0705;AVGPOST=0.9709;RSQ=0.8200;ERATE=0.0052;THETA=0.0008;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 17266132 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.859;LDAF=0.0435;AVGPOST=0.9833;RSQ=0.8393;ERATE=0.0020;THETA=0.0016;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 17266204 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0044;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17266327 . AGAGTAGGT A 1403 PASS INDEL;BAVGPOST=0.999;BRSQ=0.824;LDAF=0.0049;AVGPOST=0.9965;RSQ=0.7307;ERATE=0.0009;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 17266335 rs67179265 T TG 20 PASS INDEL;BAVGPOST=0.991;BRSQ=0.485;LDAF=0.0118;AVGPOST=0.9854;RSQ=0.4723;ERATE=0.0042;THETA=0.0022;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 17266355 . G GC 420 PASS INDEL;BAVGPOST=0.991;BRSQ=0.606;LDAF=0.0194;AVGPOST=0.9782;RSQ=0.5026;ERATE=0.0063;THETA=0.0013;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 17266357 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0073;AVGPOST=0.9981;RSQ=0.8977;ERATE=0.0027;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 17266383 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0037;AVGPOST=0.9993;RSQ=0.9198;ERATE=0.0019;THETA=0.0025;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 17266451 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7608;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17266464 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0045;AVGPOST=0.9988;RSQ=0.9035;ERATE=0.0004;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 17266511 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7887;ERATE=0.0007;THETA=0.0070;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17266536 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.892;LDAF=0.2404;AVGPOST=0.9637;RSQ=0.8953;ERATE=0.0089;THETA=0.0007;AC=516;AN=2184 GT:DS:GL:BD 0.23626374 0
1 17266586 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.917;LDAF=0.0100;AVGPOST=0.9947;RSQ=0.7869;ERATE=0.0014;THETA=0.0032;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 17266608 rs66655997 TG T 1190 PASS INDEL;BAVGPOST=0.977;BRSQ=0.783;LDAF=0.0577;AVGPOST=0.9717;RSQ=0.7977;ERATE=0.0056;THETA=0.0014;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 17266648 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.987;LDAF=0.1751;AVGPOST=0.9910;RSQ=0.9764;ERATE=0.0045;THETA=0.0036;AC=380;AN=2184 GT:DS:GL:BD 0.17399268 0
1 17266701 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6318;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17266837 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0068;AVGPOST=0.9963;RSQ=0.7951;ERATE=0.0005;THETA=0.0046;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 17266839 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.653;LDAF=0.0038;AVGPOST=0.9962;RSQ=0.5612;ERATE=0.0008;THETA=0.0019;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17266878 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.932;BRSQ=0.778;LDAF=0.3065;AVGPOST=0.9265;RSQ=0.7826;ERATE=0.0180;THETA=0.0035;AC=668;AN=2184 GT:DS:GL:BD 0.30586082 0
1 17267009 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.834;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.6423;ERATE=0.0004;THETA=0.0037;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17267172 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6708;ERATE=0.0005;THETA=0.0025;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17267204 rs67728109 AGTTTT A 169 PASS INDEL;BAVGPOST=0.995;BRSQ=0.711;LDAF=0.0110;AVGPOST=0.9899;RSQ=0.5948;ERATE=0.0056;THETA=0.0022;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 17267318 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8241;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17267362 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.753;LDAF=0.0086;AVGPOST=0.9949;RSQ=0.7740;ERATE=0.0008;THETA=0.0017;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 17267502 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.744;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7100;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17267592 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.671;LDAF=0.0112;AVGPOST=0.9873;RSQ=0.5374;ERATE=0.0043;THETA=0.0045;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 17267732 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.897;LDAF=0.2042;AVGPOST=0.9639;RSQ=0.8922;ERATE=0.0037;THETA=0.0051;AC=444;AN=2184 GT:DS:GL:BD 0.20329671 0
1 17267808 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6818;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17267877 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6552;ERATE=0.0004;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17267885 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.930;LDAF=0.0474;AVGPOST=0.9971;RSQ=0.9744;ERATE=0.0004;THETA=0.0006;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 17267994 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.709;LDAF=0.0087;AVGPOST=0.9948;RSQ=0.7397;ERATE=0.0005;THETA=0.0051;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 17268016 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.915;LDAF=0.2015;AVGPOST=0.9650;RSQ=0.8951;ERATE=0.0010;THETA=0.0010;AC=437;AN=2184 GT:DS:GL:BD 0.20009157 0
1 17268159 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.590;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.7659;ERATE=0.0005;THETA=0.0016;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17268182 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.826;LDAF=0.1038;AVGPOST=0.9754;RSQ=0.8948;ERATE=0.0026;THETA=0.0003;AC=225;AN=2184 GT:DS:GL:BD 0.10302198 0
1 17268481 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0042;AVGPOST=0.9979;RSQ=0.7843;ERATE=0.0009;THETA=0.0015;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 17268506 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0216;AVGPOST=0.9979;RSQ=0.9566;ERATE=0.0004;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 17268513 . T TC 47 PASS INDEL;BAVGPOST=0.998;BRSQ=0.446;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8026;ERATE=0.0004;THETA=0.0025;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17268744 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.952;LDAF=0.1144;AVGPOST=0.9894;RSQ=0.9590;ERATE=0.0007;THETA=0.0011;AC=247;AN=2184 GT:DS:GL:BD 0.11309524 0
1 17268833 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.981;LDAF=0.0469;AVGPOST=0.9987;RSQ=0.9884;ERATE=0.0004;THETA=0.0018;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 17268865 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0069;AVGPOST=0.9991;RSQ=0.9491;ERATE=0.0004;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 17268896 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0015;AVGPOST=0.9990;RSQ=0.7385;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17268918 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0042;AVGPOST=0.9979;RSQ=0.7964;ERATE=0.0008;THETA=0.0011;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 17269070 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0210;AVGPOST=0.9987;RSQ=0.9738;ERATE=0.0003;THETA=0.0006;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 17269111 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17269127 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17269157 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5682;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17269167 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.7495;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17269284 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.855;LDAF=0.9887;AVGPOST=0.9971;RSQ=0.8971;ERATE=0.0005;THETA=0.0030;AC=2161;AN=2184 GT:DS:GL:BD 0.98946887 1
1 17269327 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.948;LDAF=0.0651;AVGPOST=0.9922;RSQ=0.9483;ERATE=0.0042;THETA=0.0064;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 17269380 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.687;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6005;ERATE=0.0004;THETA=0.0084;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17269476 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.929;LDAF=0.0473;AVGPOST=0.9946;RSQ=0.9490;ERATE=0.0008;THETA=0.0072;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 17269605 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.872;LDAF=0.0187;AVGPOST=0.9928;RSQ=0.8434;ERATE=0.0011;THETA=0.0052;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 17269621 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.915;LDAF=0.0439;AVGPOST=0.9951;RSQ=0.9539;ERATE=0.0004;THETA=0.0009;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 17269652 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0022;AVGPOST=0.9988;RSQ=0.7622;ERATE=0.0004;THETA=0.0044;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17269727 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.921;BRSQ=0.787;LDAF=0.4076;AVGPOST=0.8989;RSQ=0.7591;ERATE=0.0255;THETA=0.0061;AC=882;AN=2184 GT:DS:GL:BD 0.40384614 0
1 17269992 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.901;LDAF=0.8733;AVGPOST=0.9334;RSQ=0.7763;ERATE=0.0044;THETA=0.0039;AC=1941;AN=2184 GT:DS:GL:BD 0.88873625 1
1 17270321 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0049;AVGPOST=0.9979;RSQ=0.8382;ERATE=0.0007;THETA=0.0036;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 17270327 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7519;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17270750 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.540;LDAF=0.0088;AVGPOST=0.9894;RSQ=0.5014;ERATE=0.0038;THETA=0.0101;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 17270751 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.948;BRSQ=0.851;LDAF=0.2550;AVGPOST=0.9208;RSQ=0.8240;ERATE=0.0154;THETA=0.0012;AC=526;AN=2184 GT:DS:GL:BD 0.24084249 0
1 17270780 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.833;LDAF=0.0063;AVGPOST=0.9973;RSQ=0.8270;ERATE=0.0005;THETA=0.0015;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 17270791 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.949;LDAF=0.0203;AVGPOST=0.9970;RSQ=0.9426;ERATE=0.0004;THETA=0.0014;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 17270845 rs78399650 C CG 24637 PASS INDEL;BAVGPOST=0.929;BRSQ=0.757;LDAF=0.3099;AVGPOST=0.9113;RSQ=0.7487;ERATE=0.0367;THETA=0.0015;AC=634;AN=2184 GT:DS:GL:BD 0.29029304 0
1 17271016 . AT A 109 PASS INDEL;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8194;ERATE=0.0004;THETA=0.0033;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17271238 . CAGTT C 24 PASS INDEL;BAVGPOST=0.998;BRSQ=0.622;LDAF=0.0034;AVGPOST=0.9960;RSQ=0.4721;ERATE=0.0018;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17271543 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.6070;ERATE=0.0007;THETA=0.0044;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17271620 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.271;LDAF=0.0067;AVGPOST=0.9888;RSQ=0.3405;ERATE=0.0013;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17271989 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.960;LDAF=0.0215;AVGPOST=0.9994;RSQ=0.9890;ERATE=0.0003;THETA=0.0031;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 17272037 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.917;LDAF=0.0249;AVGPOST=0.9946;RSQ=0.9032;ERATE=0.0024;THETA=0.0013;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 17272044 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.923;BRSQ=0.642;LDAF=0.1443;AVGPOST=0.9030;RSQ=0.6582;ERATE=0.0499;THETA=0.0103;AC=262;AN=2184 GT:DS:GL:BD 0.11996337 0
1 17272075 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.944;BRSQ=0.703;LDAF=0.1109;AVGPOST=0.9224;RSQ=0.6728;ERATE=0.0331;THETA=0.0070;AC=200;AN=2184 GT:DS:GL:BD 0.09157509 0
1 17272264 . AGACCTCTG A 118 PASS INDEL;BAVGPOST=1.000;BRSQ=0.648;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.3055;ERATE=0.0006;THETA=0.0062;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17272329 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.834;LDAF=0.0443;AVGPOST=0.9805;RSQ=0.8264;ERATE=0.0041;THETA=0.0010;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 17272351 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.846;LDAF=0.0428;AVGPOST=0.9829;RSQ=0.8422;ERATE=0.0019;THETA=0.0051;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 17272364 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0207;AVGPOST=0.9977;RSQ=0.9533;ERATE=0.0005;THETA=0.0007;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 17272383 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.965;LDAF=0.0296;AVGPOST=0.9964;RSQ=0.9550;ERATE=0.0005;THETA=0.0066;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 17272493 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.970;LDAF=0.0590;AVGPOST=0.9856;RSQ=0.8981;ERATE=0.0052;THETA=0.0012;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 17272498 . CAG C 92 PASS INDEL;BAVGPOST=0.999;BRSQ=0.720;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4698;ERATE=0.0004;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17272503 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.978;LDAF=0.1210;AVGPOST=0.9871;RSQ=0.9534;ERATE=0.0006;THETA=0.0027;AC=265;AN=2184 GT:DS:GL:BD 0.12133700 0
1 17272579 . C CT 135 PASS INDEL;BAVGPOST=0.996;BRSQ=0.863;LDAF=0.0170;AVGPOST=0.9926;RSQ=0.8442;ERATE=0.0004;THETA=0.0008;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 17272580 . T TC 1966 PASS INDEL;BAVGPOST=0.997;BRSQ=0.904;LDAF=0.0222;AVGPOST=0.9942;RSQ=0.8964;ERATE=0.0012;THETA=0.0059;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 17272627 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.839;LDAF=0.0154;AVGPOST=0.9918;RSQ=0.8104;ERATE=0.0015;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 17272777 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0069;AVGPOST=0.9996;RSQ=0.9752;ERATE=0.0004;THETA=0.0009;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 17272886 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.801;LDAF=0.0211;AVGPOST=0.9836;RSQ=0.7133;ERATE=0.0017;THETA=0.0034;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 17272980 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.874;LDAF=0.0209;AVGPOST=0.9967;RSQ=0.9330;ERATE=0.0008;THETA=0.0028;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 17273049 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0216;AVGPOST=0.9997;RSQ=0.9950;ERATE=0.0003;THETA=0.0007;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 17273058 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0215;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0057;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 17273121 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.756;LDAF=0.0285;AVGPOST=0.9809;RSQ=0.7399;ERATE=0.0043;THETA=0.0010;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 17273132 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5353;ERATE=0.0004;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17273228 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.598;LDAF=0.0076;AVGPOST=0.9889;RSQ=0.4645;ERATE=0.0009;THETA=0.0015;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 17273229 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.753;LDAF=0.0017;AVGPOST=0.9987;RSQ=0.6653;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17273371 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.789;LDAF=0.0022;AVGPOST=0.9987;RSQ=0.7479;ERATE=0.0011;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17273396 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.913;LDAF=0.1890;AVGPOST=0.9762;RSQ=0.9254;ERATE=0.0019;THETA=0.0030;AC=406;AN=2184 GT:DS:GL:BD 0.18589744 0
1 17273397 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.388;LDAF=0.0037;AVGPOST=0.9935;RSQ=0.3060;ERATE=0.0014;THETA=0.0093;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17273443 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.955;LDAF=0.0287;AVGPOST=0.9926;RSQ=0.8906;ERATE=0.0007;THETA=0.0077;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 17273444 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.889;LDAF=0.1984;AVGPOST=0.9626;RSQ=0.8825;ERATE=0.0028;THETA=0.0131;AC=412;AN=2184 GT:DS:GL:BD 0.18864469 0
1 17273492 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.873;LDAF=0.0114;AVGPOST=0.9966;RSQ=0.8707;ERATE=0.0005;THETA=0.0054;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 17273493 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.944;BRSQ=0.825;LDAF=0.4397;AVGPOST=0.9324;RSQ=0.8159;ERATE=0.0298;THETA=0.0012;AC=944;AN=2184 GT:DS:GL:BD 0.43223444 0
1 17273667 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8359;ERATE=0.0004;THETA=0.0111;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17273671 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.802;LDAF=0.0110;AVGPOST=0.9962;RSQ=0.8685;ERATE=0.0009;THETA=0.0062;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 17274116 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.513;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.6999;ERATE=0.0005;THETA=0.0054;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17274123 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.611;LDAF=0.0340;AVGPOST=0.9665;RSQ=0.6007;ERATE=0.0042;THETA=0.0108;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 17274128 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.881;LDAF=0.9064;AVGPOST=0.9618;RSQ=0.8222;ERATE=0.0017;THETA=0.0220;AC=1999;AN=2184 GT:DS:GL:BD 0.91529304 1
1 17274129 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.698;LDAF=0.0591;AVGPOST=0.9541;RSQ=0.6615;ERATE=0.0020;THETA=0.0156;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 17274180 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.741;LDAF=0.0053;AVGPOST=0.9955;RSQ=0.6654;ERATE=0.0011;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 17274233 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0051;AVGPOST=0.9985;RSQ=0.8945;ERATE=0.0008;THETA=0.0055;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 17274250 rs71760112 CAAGT C 1433 PASS INDEL;BAVGPOST=0.989;BRSQ=0.834;LDAF=0.0343;AVGPOST=0.9849;RSQ=0.8111;ERATE=0.0108;THETA=0.0062;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 17274258 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8670;ERATE=0.0005;THETA=0.0015;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 17274341 . G GT 165 PASS INDEL;BAVGPOST=0.984;BRSQ=0.556;LDAF=0.0250;AVGPOST=0.9676;RSQ=0.4553;ERATE=0.0079;THETA=0.0028;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 17274388 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.746;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.5778;ERATE=0.0007;THETA=0.0145;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17274390 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.825;LDAF=0.0037;AVGPOST=0.9977;RSQ=0.7277;ERATE=0.0006;THETA=0.0047;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 17274535 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.732;LDAF=0.0024;AVGPOST=0.9985;RSQ=0.7772;ERATE=0.0004;THETA=0.0032;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17274560 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.698;LDAF=0.0256;AVGPOST=0.9785;RSQ=0.6874;ERATE=0.0006;THETA=0.0031;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 17274566 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6628;ERATE=0.0004;THETA=0.0172;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17274645 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6880;ERATE=0.0004;THETA=0.0122;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17274688 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6057;ERATE=0.0004;THETA=0.0086;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17274795 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17274930 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0004;THETA=0.0120;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17275018 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0217;AVGPOST=0.9961;RSQ=0.9301;ERATE=0.0004;THETA=0.0152;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 17275046 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0073;AVGPOST=0.9981;RSQ=0.8946;ERATE=0.0006;THETA=0.0143;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 17275102 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.966;LDAF=0.1345;AVGPOST=0.9790;RSQ=0.9284;ERATE=0.0005;THETA=0.0204;AC=287;AN=2184 GT:DS:GL:BD 0.13141026 0
1 17275150 . T TG 21 PASS INDEL;BAVGPOST=0.994;BRSQ=0.513;LDAF=0.0102;AVGPOST=0.9872;RSQ=0.4502;ERATE=0.0047;THETA=0.0176;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 17275260 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6409;ERATE=0.0004;THETA=0.0173;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17275275 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.792;LDAF=0.0178;AVGPOST=0.9867;RSQ=0.7274;ERATE=0.0005;THETA=0.0012;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 17275277 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.789;LDAF=0.0176;AVGPOST=0.9866;RSQ=0.7261;ERATE=0.0004;THETA=0.0045;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 17275429 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.950;BRSQ=0.615;LDAF=0.0766;AVGPOST=0.9397;RSQ=0.6611;ERATE=0.0293;THETA=0.0016;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 17275464 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.723;LDAF=0.0300;AVGPOST=0.9786;RSQ=0.7161;ERATE=0.0102;THETA=0.0100;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 17275532 . GC G 245 PASS INDEL;BAVGPOST=0.985;BRSQ=0.561;LDAF=0.0159;AVGPOST=0.9840;RSQ=0.5808;ERATE=0.0020;THETA=0.0013;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 17275557 . A ACTTAGAT 1897 PASS INDEL;BAVGPOST=0.995;BRSQ=0.736;LDAF=0.0104;AVGPOST=0.9923;RSQ=0.6919;ERATE=0.0007;THETA=0.0107;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 17275622 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.967;BRSQ=0.893;LDAF=0.1808;AVGPOST=0.9544;RSQ=0.8847;ERATE=0.0099;THETA=0.0115;AC=384;AN=2184 GT:DS:GL:BD 0.17582418 0
1 17275668 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.794;LDAF=0.0121;AVGPOST=0.9917;RSQ=0.7427;ERATE=0.0021;THETA=0.0008;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 17275689 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.916;LDAF=0.0060;AVGPOST=0.9972;RSQ=0.7914;ERATE=0.0007;THETA=0.0221;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 17275733 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.748;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.5383;ERATE=0.0006;THETA=0.0131;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17275835 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5134;ERATE=0.0004;THETA=0.0173;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17275895 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.964;BRSQ=0.930;LDAF=0.3452;AVGPOST=0.9457;RSQ=0.9107;ERATE=0.0012;THETA=0.0010;AC=749;AN=2184 GT:DS:GL:BD 0.34294870 0
1 17275968 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0004;THETA=0.0201;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17276085 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0217;AVGPOST=0.9976;RSQ=0.9548;ERATE=0.0004;THETA=0.0074;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 17276120 . T TCTC 105 PASS INDEL;BAVGPOST=0.998;BRSQ=0.796;LDAF=0.0054;AVGPOST=0.9959;RSQ=0.6805;ERATE=0.0028;THETA=0.0022;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 17276223 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.965;LDAF=0.2235;AVGPOST=0.9802;RSQ=0.9627;ERATE=0.0017;THETA=0.0017;AC=483;AN=2184 GT:DS:GL:BD 0.22115384 0
1 17276299 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0051;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17276357 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.986;LDAF=0.1932;AVGPOST=0.9852;RSQ=0.9681;ERATE=0.0004;THETA=0.0011;AC=422;AN=2184 GT:DS:GL:BD 0.19322345 0
1 17276359 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9599;ERATE=0.0003;THETA=0.0021;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 17276406 . AGG A 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.685;LDAF=0.0019;AVGPOST=0.9976;RSQ=0.5121;ERATE=0.0006;THETA=0.0037;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17276456 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.921;LDAF=0.0279;AVGPOST=0.9916;RSQ=0.8820;ERATE=0.0004;THETA=0.0014;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 17276461 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.590;LDAF=0.0041;AVGPOST=0.9963;RSQ=0.6150;ERATE=0.0009;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 17276595 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4829;ERATE=0.0005;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17276627 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.962;BRSQ=0.918;LDAF=0.2838;AVGPOST=0.9410;RSQ=0.9001;ERATE=0.0010;THETA=0.0007;AC=598;AN=2184 GT:DS:GL:BD 0.27380952 0
1 17276668 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.685;LDAF=0.0047;AVGPOST=0.9958;RSQ=0.6511;ERATE=0.0005;THETA=0.0017;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 17276715 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0060;AVGPOST=0.9987;RSQ=0.9017;ERATE=0.0005;THETA=0.0014;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 17276849 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.904;LDAF=0.0316;AVGPOST=0.9877;RSQ=0.8428;ERATE=0.0004;THETA=0.0054;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 17276888 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0066;AVGPOST=0.9985;RSQ=0.9056;ERATE=0.0004;THETA=0.0009;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 17276978 rs61690020 CT C 2338 PASS INDEL;BAVGPOST=0.949;BRSQ=0.732;LDAF=0.0903;AVGPOST=0.9423;RSQ=0.7942;ERATE=0.0007;THETA=0.0007;AC=184;AN=2184 GT:DS:GL:BD 0.08424909 0
1 17276982 rs57090008 G GTA 5137 PASS INDEL;BAVGPOST=0.947;BRSQ=0.747;LDAF=0.0968;AVGPOST=0.9409;RSQ=0.8038;ERATE=0.0007;THETA=0.0062;AC=194;AN=2184 GT:DS:GL:BD 0.08882784 0
1 17276998 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.654;LDAF=0.0038;AVGPOST=0.9947;RSQ=0.5045;ERATE=0.0004;THETA=0.0020;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17277133 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5571;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17277143 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0069;AVGPOST=0.9990;RSQ=0.9453;ERATE=0.0004;THETA=0.0009;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 17277274 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.826;LDAF=0.0503;AVGPOST=0.9844;RSQ=0.8796;ERATE=0.0015;THETA=0.0008;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 17277328 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6798;ERATE=0.0004;THETA=0.0041;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17277332 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7962;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17277366 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9824;ERATE=0.0003;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 17277485 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.743;LDAF=0.0453;AVGPOST=0.9715;RSQ=0.7454;ERATE=0.0123;THETA=0.0030;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 17277767 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17277789 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17277790 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0004;THETA=0.0090;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17277804 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8702;ERATE=0.0004;THETA=0.0014;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 17277994 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9830;ERATE=0.0003;THETA=0.0047;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 17278165 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.0080;AVGPOST=0.9983;RSQ=0.9194;ERATE=0.0004;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 17278212 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.7755;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17278221 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.871;LDAF=0.0689;AVGPOST=0.9749;RSQ=0.8457;ERATE=0.0066;THETA=0.0011;AC=136;AN=2184 GT:DS:GL:BD 0.06227106 0
1 17278376 . TC T 239 PASS INDEL;BAVGPOST=0.957;BRSQ=0.451;LDAF=0.0563;AVGPOST=0.9263;RSQ=0.4354;ERATE=0.0176;THETA=0.0021;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 17278532 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0223;AVGPOST=0.9967;RSQ=0.9324;ERATE=0.0005;THETA=0.0013;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 17278629 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0086;AVGPOST=0.9950;RSQ=0.7822;ERATE=0.0008;THETA=0.0013;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 17278679 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.610;LDAF=0.0100;AVGPOST=0.9923;RSQ=0.7182;ERATE=0.0006;THETA=0.0026;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 17278693 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.487;LDAF=0.0063;AVGPOST=0.9916;RSQ=0.4382;ERATE=0.0015;THETA=0.0014;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17278707 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0076;AVGPOST=0.9977;RSQ=0.8807;ERATE=0.0006;THETA=0.0074;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 17278746 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.470;LDAF=0.0071;AVGPOST=0.9881;RSQ=0.2930;ERATE=0.0010;THETA=0.0110;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17278787 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0383;AVGPOST=0.9967;RSQ=0.9676;ERATE=0.0005;THETA=0.0033;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 17278841 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.950;BRSQ=0.612;LDAF=0.0771;AVGPOST=0.9299;RSQ=0.5927;ERATE=0.0169;THETA=0.0009;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 17278851 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0048;AVGPOST=0.9985;RSQ=0.8524;ERATE=0.0006;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 17278935 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.964;BRSQ=0.522;LDAF=0.0474;AVGPOST=0.9550;RSQ=0.6212;ERATE=0.0049;THETA=0.0019;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 17279049 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.958;LDAF=0.0254;AVGPOST=0.9934;RSQ=0.8909;ERATE=0.0011;THETA=0.0021;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 17279061 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.943;LDAF=0.0118;AVGPOST=0.9935;RSQ=0.7740;ERATE=0.0006;THETA=0.0023;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 17279150 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0060;AVGPOST=0.9985;RSQ=0.8943;ERATE=0.0004;THETA=0.0043;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 17279268 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0399;AVGPOST=0.9982;RSQ=0.9828;ERATE=0.0005;THETA=0.0006;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 17279316 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.941;LDAF=0.0404;AVGPOST=0.9954;RSQ=0.9571;ERATE=0.0008;THETA=0.0018;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 17279409 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0075;AVGPOST=0.9980;RSQ=0.8978;ERATE=0.0004;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 17279432 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.572;LDAF=0.0020;AVGPOST=0.9969;RSQ=0.4227;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17279460 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0036;AVGPOST=0.9974;RSQ=0.7003;ERATE=0.0009;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 17279485 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.719;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6550;ERATE=0.0009;THETA=0.0031;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17279605 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.834;LDAF=0.0066;AVGPOST=0.9985;RSQ=0.9200;ERATE=0.0004;THETA=0.0010;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 17279629 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7147;ERATE=0.0004;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17279662 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.850;LDAF=0.0725;AVGPOST=0.9622;RSQ=0.7669;ERATE=0.0122;THETA=0.0147;AC=136;AN=2184 GT:DS:GL:BD 0.06227106 0
1 17279685 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.705;LDAF=0.0594;AVGPOST=0.9479;RSQ=0.6195;ERATE=0.0151;THETA=0.0023;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 17279753 rs71755271 GC G 27 PASS INDEL;BAVGPOST=0.971;BRSQ=0.232;LDAF=0.0191;AVGPOST=0.9780;RSQ=0.5415;ERATE=0.0018;THETA=0.0028;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 17279899 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.443;LDAF=0.0053;AVGPOST=0.9927;RSQ=0.4720;ERATE=0.0028;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17279933 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0092;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17279980 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17279993 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.860;LDAF=0.0512;AVGPOST=0.9802;RSQ=0.8491;ERATE=0.0052;THETA=0.0030;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 17280006 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6333;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17280467 . TAGAA T 66 PASS INDEL;BAVGPOST=0.993;BRSQ=0.212;LDAF=0.0259;AVGPOST=0.9581;RSQ=0.3287;ERATE=0.0034;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 17280735 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0055;AVGPOST=0.9996;RSQ=0.9692;ERATE=0.0013;THETA=0.0013;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 17280746 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.870;LDAF=0.0220;AVGPOST=0.9935;RSQ=0.8930;ERATE=0.0106;THETA=0.0037;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 17280821 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.788;LDAF=0.0103;AVGPOST=0.9936;RSQ=0.7506;ERATE=0.0064;THETA=0.0028;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 17281003 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.984;LDAF=0.7036;AVGPOST=0.9826;RSQ=0.9723;ERATE=0.0005;THETA=0.0019;AC=1539;AN=2184 GT:DS:GL:BD 0.70467031 1
1 17281044 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0036;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17281045 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.851;LDAF=0.0030;AVGPOST=0.9990;RSQ=0.8559;ERATE=0.0005;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 17281119 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.782;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7966;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17281235 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0387;AVGPOST=0.9993;RSQ=0.9926;ERATE=0.0003;THETA=0.0004;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 17281248 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17281278 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9045;ERATE=0.0003;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 17281301 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.6754;ERATE=0.0013;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17281368 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17281370 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0004;THETA=0.0050;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17281382 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0036;AVGPOST=0.9980;RSQ=0.7710;ERATE=0.0010;THETA=0.0014;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 17281525 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17281609 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17281658 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0064;AVGPOST=0.9999;RSQ=0.9900;ERATE=0.0010;THETA=0.0036;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 17281759 . C CG 7103 PASS INDEL;BAVGPOST=0.983;BRSQ=0.952;LDAF=0.1861;AVGPOST=0.9780;RSQ=0.9460;ERATE=0.0034;THETA=0.0019;AC=400;AN=2184 GT:DS:GL:BD 0.18315019 0
1 17281862 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17281894 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.624;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17281912 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8177;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17281943 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5069;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17281959 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.9163;ERATE=0.0004;THETA=0.0036;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 17281994 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.633;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7608;ERATE=0.0004;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17282026 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17282172 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7109;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17282313 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.5847;ERATE=0.0004;THETA=0.0040;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17282314 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7017;ERATE=0.0005;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17282425 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1424;AVGPOST=0.9990;RSQ=0.9968;ERATE=0.0003;THETA=0.0005;AC=312;AN=2184 GT:DS:GL:BD 0.14285715 0
1 17282573 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1426;AVGPOST=0.9992;RSQ=0.9976;ERATE=0.0003;THETA=0.0047;AC=312;AN=2184 GT:DS:GL:BD 0.14285715 0
1 17282722 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7669;ERATE=0.0004;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17283075 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0089;AVGPOST=0.9987;RSQ=0.9374;ERATE=0.0004;THETA=0.0010;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 17283191 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17283445 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0232;AVGPOST=0.9977;RSQ=0.9554;ERATE=0.0005;THETA=0.0005;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 17283465 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.719;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5763;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17283493 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.776;LDAF=0.0028;AVGPOST=0.9986;RSQ=0.7731;ERATE=0.0005;THETA=0.0025;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17283535 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17283555 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6663;ERATE=0.0004;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17283556 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0397;AVGPOST=0.9974;RSQ=0.9718;ERATE=0.0006;THETA=0.0007;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 17283605 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7490;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17283858 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.534;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4831;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17283880 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0036;AVGPOST=0.9978;RSQ=0.7437;ERATE=0.0004;THETA=0.0012;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 17283936 . A AT 26 PASS INDEL;BAVGPOST=0.999;BRSQ=0.712;LDAF=0.0021;AVGPOST=0.9973;RSQ=0.4138;ERATE=0.0005;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17283999 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.413;LDAF=0.0027;AVGPOST=0.9956;RSQ=0.3039;ERATE=0.0008;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17284086 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.603;LDAF=0.0034;AVGPOST=0.9949;RSQ=0.3536;ERATE=0.0013;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17284247 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.610;LDAF=0.0120;AVGPOST=0.9934;RSQ=0.7975;ERATE=0.0005;THETA=0.0007;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 17284256 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.964;LDAF=0.0228;AVGPOST=0.9960;RSQ=0.9256;ERATE=0.0005;THETA=0.0004;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 17284341 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.746;LDAF=0.0018;AVGPOST=0.9974;RSQ=0.4480;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17284434 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1423;AVGPOST=0.9990;RSQ=0.9966;ERATE=0.0004;THETA=0.0010;AC=312;AN=2184 GT:DS:GL:BD 0.14285715 0
1 17284449 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17284492 . C CG 840 PASS INDEL;BAVGPOST=0.998;BRSQ=0.940;LDAF=0.0164;AVGPOST=0.9963;RSQ=0.9030;ERATE=0.0006;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 17284493 rs66678901 CT C 34977 PASS INDEL;BAVGPOST=0.800;BRSQ=0.663;LDAF=0.6192;AVGPOST=0.7908;RSQ=0.6692;ERATE=0.0243;THETA=0.0024;AC=1341;AN=2184 GT:DS:GL:BD 0.61401099 1
1 17284497 rs67631012 CT C 24329 PASS INDEL;BAVGPOST=0.935;BRSQ=0.900;LDAF=0.4408;AVGPOST=0.9223;RSQ=0.8859;ERATE=0.0034;THETA=0.0021;AC=956;AN=2184 GT:DS:GL:BD 0.43772894 0
1 17284635 . GA G 172 PASS INDEL;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7583;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17284730 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0102;AVGPOST=0.9995;RSQ=0.9808;ERATE=0.0003;THETA=0.0026;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 17284936 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8359;ERATE=0.0004;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17284938 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0197;AVGPOST=1.0000;RSQ=0.9990;ERATE=0.0003;THETA=0.0025;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 17285008 . TG T 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.714;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4291;ERATE=0.0007;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17285022 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1621;AVGPOST=0.9991;RSQ=0.9973;ERATE=0.0004;THETA=0.0006;AC=354;AN=2184 GT:DS:GL:BD 0.16208792 0
1 17285237 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.8311;ERATE=0.0004;THETA=0.0021;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17285265 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17285298 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1423;AVGPOST=0.9992;RSQ=0.9975;ERATE=0.0004;THETA=0.0008;AC=311;AN=2184 GT:DS:GL:BD 0.14239927 0
1 17285429 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.486;LDAF=0.0020;AVGPOST=0.9978;RSQ=0.5254;ERATE=0.0007;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17285464 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1620;AVGPOST=0.9979;RSQ=0.9943;ERATE=0.0004;THETA=0.0038;AC=353;AN=2184 GT:DS:GL:BD 0.16163003 0
1 17285557 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.657;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5620;ERATE=0.0004;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17285586 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0395;AVGPOST=0.9984;RSQ=0.9815;ERATE=0.0004;THETA=0.0004;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 17285770 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.795;LDAF=0.0022;AVGPOST=0.9979;RSQ=0.5884;ERATE=0.0006;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17286031 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0194;AVGPOST=0.9995;RSQ=0.9885;ERATE=0.0004;THETA=0.0045;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 17286168 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.936;LDAF=0.0088;AVGPOST=0.9977;RSQ=0.9159;ERATE=0.0003;THETA=0.0048;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 17286210 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1612;AVGPOST=0.9957;RSQ=0.9890;ERATE=0.0007;THETA=0.0048;AC=353;AN=2184 GT:DS:GL:BD 0.16163003 0
1 17286305 . TA T 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0010;AVGPOST=0.9987;RSQ=0.3850;ERATE=0.0006;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17286364 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.699;LDAF=0.0017;AVGPOST=0.9976;RSQ=0.3712;ERATE=0.0008;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17286459 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0140;AVGPOST=0.9993;RSQ=0.9796;ERATE=0.0004;THETA=0.0023;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 17286503 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1603;AVGPOST=0.9950;RSQ=0.9867;ERATE=0.0008;THETA=0.0008;AC=348;AN=2184 GT:DS:GL:BD 0.15934066 0
1 17286504 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.698;LDAF=0.0101;AVGPOST=0.9964;RSQ=0.8472;ERATE=0.0006;THETA=0.0014;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 17286527 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.525;LDAF=0.0111;AVGPOST=0.9875;RSQ=0.5365;ERATE=0.0026;THETA=0.0012;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 17286536 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.743;LDAF=0.0024;AVGPOST=0.9975;RSQ=0.5430;ERATE=0.0007;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17286746 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.617;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.3275;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17286760 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9789;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 17286761 . C CA 11 PASS INDEL;BAVGPOST=0.999;BRSQ=0.605;LDAF=0.0013;AVGPOST=0.9981;RSQ=0.3890;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17286794 rs113892729 C CA 83 PASS INDEL;BAVGPOST=0.991;BRSQ=0.565;LDAF=0.0169;AVGPOST=0.9795;RSQ=0.5044;ERATE=0.0073;THETA=0.0021;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 17286827 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7375;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17286836 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1610;AVGPOST=0.9966;RSQ=0.9918;ERATE=0.0005;THETA=0.0006;AC=354;AN=2184 GT:DS:GL:BD 0.16208792 0
1 17287008 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0004;AVGPOST=0.9997;RSQ=0.7248;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17287143 . GGTT G 127 PASS INDEL;BAVGPOST=1.000;BRSQ=0.657;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6112;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17287159 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.0061;AVGPOST=0.9988;RSQ=0.9136;ERATE=0.0004;THETA=0.0020;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 17287236 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.927;LDAF=0.0072;AVGPOST=0.9985;RSQ=0.9183;ERATE=0.0004;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 17287301 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.971;LDAF=0.0566;AVGPOST=0.9967;RSQ=0.9783;ERATE=0.0004;THETA=0.0026;AC=122;AN=2184 GT:DS:GL:BD 0.05586081 0
1 17287414 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.952;LDAF=0.2913;AVGPOST=0.9434;RSQ=0.8977;ERATE=0.0009;THETA=0.0004;AC=628;AN=2184 GT:DS:GL:BD 0.28754580 0
1 17287639 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.983;LDAF=0.1430;AVGPOST=0.9912;RSQ=0.9711;ERATE=0.0012;THETA=0.0079;AC=310;AN=2184 GT:DS:GL:BD 0.14194140 0
1 17287939 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0404;AVGPOST=0.9985;RSQ=0.9840;ERATE=0.0006;THETA=0.0046;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 17288005 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.376;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.3967;ERATE=0.0006;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17288016 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.846;LDAF=0.0095;AVGPOST=0.9966;RSQ=0.8412;ERATE=0.0004;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 17288033 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.643;LDAF=0.0033;AVGPOST=0.9969;RSQ=0.5970;ERATE=0.0006;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17288053 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.965;LDAF=0.0103;AVGPOST=0.9993;RSQ=0.9705;ERATE=0.0003;THETA=0.0010;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 17288060 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.686;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.3658;ERATE=0.0005;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17288090 . TG T 881 PASS INDEL;BAVGPOST=0.997;BRSQ=0.851;LDAF=0.0082;AVGPOST=0.9968;RSQ=0.8343;ERATE=0.0007;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 17288122 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.658;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.4300;ERATE=0.0004;THETA=0.0048;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17288139 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8492;ERATE=0.0006;THETA=0.0088;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17288199 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0054;AVGPOST=0.9990;RSQ=0.9142;ERATE=0.0004;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 17288307 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0133;AVGPOST=0.9995;RSQ=0.9822;ERATE=0.0003;THETA=0.0011;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 17288336 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6171;ERATE=0.0004;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17288389 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0130;AVGPOST=0.9992;RSQ=0.9768;ERATE=0.0004;THETA=0.0046;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 17288560 . C CT 165 PASS INDEL;BAVGPOST=0.977;BRSQ=0.548;LDAF=0.0312;AVGPOST=0.9658;RSQ=0.5437;ERATE=0.0053;THETA=0.0004;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 17288564 . TTG T 7456 PASS INDEL;BAVGPOST=0.956;BRSQ=0.835;LDAF=0.1531;AVGPOST=0.9537;RSQ=0.8769;ERATE=0.0007;THETA=0.0012;AC=339;AN=2184 GT:DS:GL:BD 0.15521978 0
1 17288565 . TG T 8415 PASS INDEL;BAVGPOST=0.974;BRSQ=0.930;LDAF=0.1894;AVGPOST=0.9807;RSQ=0.9600;ERATE=0.0004;THETA=0.0033;AC=419;AN=2184 GT:DS:GL:BD 0.19184981 0
1 17288566 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.923;LDAF=0.1894;AVGPOST=0.9814;RSQ=0.9590;ERATE=0.0012;THETA=0.0005;AC=421;AN=2184 GT:DS:GL:BD 0.19276556 0
1 17288621 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0057;AVGPOST=0.9988;RSQ=0.9236;ERATE=0.0003;THETA=0.0051;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 17288804 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.383;LDAF=0.0050;AVGPOST=0.9937;RSQ=0.4631;ERATE=0.0006;THETA=0.0135;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17288947 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.363;LDAF=0.0104;AVGPOST=0.9832;RSQ=0.3444;ERATE=0.0021;THETA=0.0051;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 17289029 . C CA 477 PASS INDEL;BAVGPOST=0.516;BRSQ=0.147;LDAF=0.4395;AVGPOST=0.6165;RSQ=0.3484;ERATE=0.0170;THETA=0.0008;AC=722;AN=2184 GT:DS:GL:BD 0.33058608 0
1 17289046 . A AC 429 PASS INDEL;BAVGPOST=0.986;BRSQ=0.809;LDAF=0.0440;AVGPOST=0.9880;RSQ=0.8741;ERATE=0.0016;THETA=0.0040;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 17289203 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.874;LDAF=0.0088;AVGPOST=0.9962;RSQ=0.8338;ERATE=0.0008;THETA=0.0017;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 17289227 . GTA G 182 PASS INDEL;BAVGPOST=0.997;BRSQ=0.593;LDAF=0.0073;AVGPOST=0.9901;RSQ=0.4768;ERATE=0.0007;THETA=0.0017;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17289367 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7001;ERATE=0.0005;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17289532 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.956;LDAF=0.0047;AVGPOST=0.9986;RSQ=0.8657;ERATE=0.0005;THETA=0.0016;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 17289870 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.750;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5704;ERATE=0.0005;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17289911 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.978;LDAF=0.3677;AVGPOST=0.9726;RSQ=0.9582;ERATE=0.0011;THETA=0.0055;AC=802;AN=2184 GT:DS:GL:BD 0.36721611 0
1 17289912 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.835;LDAF=0.0188;AVGPOST=0.9915;RSQ=0.8393;ERATE=0.0003;THETA=0.0020;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 17289939 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0041;AVGPOST=0.9996;RSQ=0.9557;ERATE=0.0004;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 17290001 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.580;LDAF=0.0026;AVGPOST=0.9965;RSQ=0.3920;ERATE=0.0008;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17290058 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.942;LDAF=0.9175;AVGPOST=0.9851;RSQ=0.9265;ERATE=0.0012;THETA=0.0015;AC=2009;AN=2184 GT:DS:GL:BD 0.91987181 1
1 17290065 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0415;AVGPOST=0.9976;RSQ=0.9759;ERATE=0.0005;THETA=0.0006;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 17290191 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.383;LDAF=0.0016;AVGPOST=0.9976;RSQ=0.2898;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17290293 . G GT 71 PASS INDEL;BAVGPOST=0.969;BRSQ=0.428;LDAF=0.0297;AVGPOST=0.9640;RSQ=0.4971;ERATE=0.0025;THETA=0.0024;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 17290298 . TG T 5085 PASS INDEL;BAVGPOST=0.978;BRSQ=0.938;LDAF=0.1929;AVGPOST=0.9818;RSQ=0.9597;ERATE=0.0008;THETA=0.0017;AC=422;AN=2184 GT:DS:GL:BD 0.19322345 0
1 17290299 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.904;LDAF=0.1909;AVGPOST=0.9716;RSQ=0.9368;ERATE=0.0037;THETA=0.0005;AC=416;AN=2184 GT:DS:GL:BD 0.19047619 0
1 17290321 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.776;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6585;ERATE=0.0005;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17290352 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.833;LDAF=0.0094;AVGPOST=0.9910;RSQ=0.6093;ERATE=0.0006;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 17290353 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0071;AVGPOST=0.9946;RSQ=0.7026;ERATE=0.0006;THETA=0.0018;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 17290360 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.851;LDAF=0.0059;AVGPOST=0.9974;RSQ=0.8119;ERATE=0.0006;THETA=0.0025;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 17290393 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.384;LDAF=0.0026;AVGPOST=0.9957;RSQ=0.2924;ERATE=0.0012;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17290394 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.977;LDAF=0.0404;AVGPOST=0.9969;RSQ=0.9673;ERATE=0.0006;THETA=0.0035;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 17290493 rs111727272 ATGTT A 214 PASS INDEL;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0060;AVGPOST=0.9967;RSQ=0.7409;ERATE=0.0008;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 17290606 . TTTTTC T 18333 PASS INDEL;BAVGPOST=0.904;BRSQ=0.791;LDAF=0.2659;AVGPOST=0.9328;RSQ=0.8811;ERATE=0.0009;THETA=0.0030;AC=608;AN=2184 GT:DS:GL:BD 0.27838829 0
1 17290620 rs56245397 TC T 2119 PASS INDEL;BAVGPOST=0.872;BRSQ=0.659;LDAF=0.1945;AVGPOST=0.8746;RSQ=0.7186;ERATE=0.0064;THETA=0.0004;AC=424;AN=2184 GT:DS:GL:BD 0.19413920 0
1 17290627 . TC T 38 PASS INDEL;BAVGPOST=0.954;BRSQ=0.162;LDAF=0.0690;AVGPOST=0.8850;RSQ=0.2586;ERATE=0.0105;THETA=0.0060;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 17290633 . T TTA 701 PASS INDEL;BAVGPOST=0.997;BRSQ=0.961;LDAF=0.0431;AVGPOST=0.9915;RSQ=0.9165;ERATE=0.0012;THETA=0.0005;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 17290635 . T TA 759 PASS INDEL;BAVGPOST=0.989;BRSQ=0.860;LDAF=0.0394;AVGPOST=0.9797;RSQ=0.7877;ERATE=0.0009;THETA=0.0034;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 17290704 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.808;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6029;ERATE=0.0005;THETA=0.0063;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17290713 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0008;AVGPOST=0.9989;RSQ=0.4377;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17290777 . AC A 1119 PASS INDEL;BAVGPOST=0.996;BRSQ=0.838;LDAF=0.0109;AVGPOST=0.9943;RSQ=0.8127;ERATE=0.0004;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 17290813 rs58978200 CTCTTT C 10763 PASS INDEL;BAVGPOST=0.989;BRSQ=0.961;LDAF=0.1362;AVGPOST=0.9900;RSQ=0.9678;ERATE=0.0013;THETA=0.0051;AC=300;AN=2184 GT:DS:GL:BD 0.13736264 0
1 17291014 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0399;AVGPOST=0.9965;RSQ=0.9645;ERATE=0.0006;THETA=0.0038;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 17291099 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.702;LDAF=0.0102;AVGPOST=0.9948;RSQ=0.7909;ERATE=0.0004;THETA=0.0035;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 17291100 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.695;LDAF=0.0120;AVGPOST=0.9888;RSQ=0.6151;ERATE=0.0006;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 17291113 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5195;ERATE=0.0006;THETA=0.0043;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17291129 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.972;LDAF=0.1362;AVGPOST=0.9928;RSQ=0.9756;ERATE=0.0008;THETA=0.0042;AC=301;AN=2184 GT:DS:GL:BD 0.13782051 0
1 17291147 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.734;LDAF=0.0047;AVGPOST=0.9963;RSQ=0.6720;ERATE=0.0012;THETA=0.0060;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 17291173 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0023;AVGPOST=0.9982;RSQ=0.6745;ERATE=0.0006;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17291201 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.738;LDAF=0.0211;AVGPOST=0.9890;RSQ=0.7947;ERATE=0.0004;THETA=0.0013;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 17291209 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5389;ERATE=0.0004;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17291236 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.791;LDAF=0.0053;AVGPOST=0.9982;RSQ=0.8458;ERATE=0.0006;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 17291257 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.703;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8292;ERATE=0.0004;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17291263 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7683;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17291370 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0237;AVGPOST=0.9976;RSQ=0.9617;ERATE=0.0004;THETA=0.0016;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 17291410 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.6115;ERATE=0.0004;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17291455 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.680;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.3708;ERATE=0.0008;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17291460 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.693;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.5654;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17291465 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.759;LDAF=0.0066;AVGPOST=0.9979;RSQ=0.8553;ERATE=0.0006;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 17291502 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.5669;ERATE=0.0005;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17291601 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5687;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17291603 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.844;LDAF=0.0311;AVGPOST=0.9887;RSQ=0.8532;ERATE=0.0005;THETA=0.0012;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 17291754 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0372;AVGPOST=0.9990;RSQ=0.9887;ERATE=0.0004;THETA=0.0022;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 17291861 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.976;LDAF=0.9438;AVGPOST=0.9951;RSQ=0.9683;ERATE=0.0004;THETA=0.0009;AC=2063;AN=2184 GT:DS:GL:BD 0.94459707 1
1 17292044 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17292177 . G GT 155 PASS INDEL;BAVGPOST=0.999;BRSQ=0.697;LDAF=0.0020;AVGPOST=0.9976;RSQ=0.4797;ERATE=0.0004;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17292197 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17292223 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0379;AVGPOST=0.9999;RSQ=0.9988;ERATE=0.0005;THETA=0.0024;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 17292347 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9361;ERATE=0.0007;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17292368 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17292374 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17292404 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0769;AVGPOST=0.9997;RSQ=0.9981;ERATE=0.0004;THETA=0.0024;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 17292472 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 17292517 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0041;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17292568 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0041;AVGPOST=0.9999;RSQ=0.9845;ERATE=0.0003;THETA=0.0042;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 17292571 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9359;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17292677 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0005;THETA=0.0036;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17292678 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0115;AVGPOST=0.9998;RSQ=0.9906;ERATE=0.0007;THETA=0.0023;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 17292723 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0061;AVGPOST=0.9996;RSQ=0.9784;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 17292785 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0053;AVGPOST=0.9987;RSQ=0.8908;ERATE=0.0015;THETA=0.0012;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 17292870 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0201;AVGPOST=0.9983;RSQ=0.9611;ERATE=0.0005;THETA=0.0003;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 17292883 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17292906 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8757;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17292924 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0073;AVGPOST=0.9982;RSQ=0.8957;ERATE=0.0003;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 17292975 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.768;LDAF=0.0073;AVGPOST=0.9936;RSQ=0.6699;ERATE=0.0006;THETA=0.0013;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 17293094 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.761;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6088;ERATE=0.0004;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17293199 . ACT A 51 PASS INDEL;BAVGPOST=1.000;BRSQ=0.741;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5157;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17293384 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.796;LDAF=0.0194;AVGPOST=0.9943;RSQ=0.8730;ERATE=0.0007;THETA=0.0009;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 17293489 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8358;ERATE=0.0004;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17293554 rs55810091 GA G 36367 PASS INDEL;BAVGPOST=0.956;BRSQ=0.919;LDAF=0.6674;AVGPOST=0.9305;RSQ=0.8868;ERATE=0.0220;THETA=0.0005;AC=1479;AN=2184 GT:DS:GL:BD 0.67719781 1
1 17293564 . AG A 265 PASS INDEL;BAVGPOST=0.960;BRSQ=0.468;LDAF=0.0559;AVGPOST=0.9269;RSQ=0.4472;ERATE=0.0125;THETA=0.0083;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 17293660 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.7923;AVGPOST=0.9953;RSQ=0.9893;ERATE=0.0006;THETA=0.0007;AC=1731;AN=2184 GT:DS:GL:BD 0.79258239 1
1 17293683 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.854;LDAF=0.0039;AVGPOST=0.9976;RSQ=0.7544;ERATE=0.0019;THETA=0.0015;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 17293816 . TG T 378 PASS INDEL;BAVGPOST=0.998;BRSQ=0.920;LDAF=0.0054;AVGPOST=0.9974;RSQ=0.7899;ERATE=0.0007;THETA=0.0073;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 17293853 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0365;AVGPOST=0.9967;RSQ=0.9676;ERATE=0.0005;THETA=0.0021;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 17293889 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0038;AVGPOST=0.9952;RSQ=0.4846;ERATE=0.0020;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17293892 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.967;BRSQ=0.899;LDAF=0.1711;AVGPOST=0.9732;RSQ=0.9279;ERATE=0.0010;THETA=0.0003;AC=367;AN=2184 GT:DS:GL:BD 0.16804029 0
1 17293944 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.676;LDAF=0.0089;AVGPOST=0.9916;RSQ=0.5958;ERATE=0.0008;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 17294022 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.965;LDAF=0.0394;AVGPOST=0.9941;RSQ=0.9416;ERATE=0.0006;THETA=0.0012;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 17294164 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0050;AVGPOST=0.9979;RSQ=0.8085;ERATE=0.0006;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 17294234 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.825;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6000;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17294268 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7642;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17294283 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.760;LDAF=0.0033;AVGPOST=0.9980;RSQ=0.7394;ERATE=0.0008;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17294465 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.802;LDAF=0.0139;AVGPOST=0.9945;RSQ=0.8503;ERATE=0.0008;THETA=0.0007;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 17294499 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6646;ERATE=0.0004;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17294515 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8504;ERATE=0.0004;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 17294535 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.807;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7801;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17294654 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0113;AVGPOST=0.9984;RSQ=0.9441;ERATE=0.0004;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 17294685 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1118;AVGPOST=0.9988;RSQ=0.9960;ERATE=0.0004;THETA=0.0006;AC=244;AN=2184 GT:DS:GL:BD 0.11172161 0
1 17294742 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0039;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17294891 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7452;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17294892 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.9026;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17294999 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17295146 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0147;AVGPOST=0.9998;RSQ=0.9933;ERATE=0.0004;THETA=0.0006;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 17295345 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17295622 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17295659 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17295679 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.986;LDAF=0.9434;AVGPOST=0.9978;RSQ=0.9854;ERATE=0.0004;THETA=0.0010;AC=2062;AN=2184 GT:DS:GL:BD 0.94413918 1
1 17295764 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0887;AVGPOST=0.9999;RSQ=0.9994;ERATE=0.0003;THETA=0.0024;AC=194;AN=2184 GT:DS:GL:BD 0.08882784 0
1 17295771 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9574;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 17295772 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17295805 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7756;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17295861 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17295948 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8815;ERATE=0.0007;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17296136 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17296163 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6705;ERATE=0.0005;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17296259 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17296260 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17296315 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8587;ERATE=0.0011;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17296318 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17296320 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17296361 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0222;AVGPOST=0.9993;RSQ=0.9865;ERATE=0.0004;THETA=0.0009;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 17296401 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17296406 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9604;ERATE=0.0006;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 17296425 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9524;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17296618 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17296648 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.725;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4950;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17296699 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6818;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17296722 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0370;AVGPOST=0.9990;RSQ=0.9908;ERATE=0.0004;THETA=0.0056;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 17296792 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.781;LDAF=0.0050;AVGPOST=0.9963;RSQ=0.6831;ERATE=0.0009;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 17296793 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17296882 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.902;LDAF=0.0145;AVGPOST=0.9968;RSQ=0.9176;ERATE=0.0006;THETA=0.0007;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 17296919 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17296996 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0035;AVGPOST=0.9989;RSQ=0.8951;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 17297062 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0162;AVGPOST=0.9995;RSQ=0.9874;ERATE=0.0003;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 17297118 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0220;AVGPOST=0.9998;RSQ=0.9957;ERATE=0.0003;THETA=0.0004;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 17297132 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0062;AVGPOST=0.9995;RSQ=0.9673;ERATE=0.0019;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 17297191 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9181;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17297200 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0019;AVGPOST=0.9994;RSQ=0.8624;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17297231 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17297289 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.6784;AVGPOST=0.9982;RSQ=0.9970;ERATE=0.0003;THETA=0.0007;AC=1482;AN=2184 GT:DS:GL:BD 0.67857140 1
1 17297452 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0004;AVGPOST=0.9998;RSQ=0.7709;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17297567 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0070;AVGPOST=0.9998;RSQ=0.9845;ERATE=0.0004;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 17297583 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0983;AVGPOST=0.9998;RSQ=0.9990;ERATE=0.0003;THETA=0.0008;AC=215;AN=2184 GT:DS:GL:BD 0.09844323 0
1 17297587 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.984;LDAF=0.0871;AVGPOST=0.9985;RSQ=0.9924;ERATE=0.0003;THETA=0.0004;AC=190;AN=2184 GT:DS:GL:BD 0.08699634 0
1 17297898 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0004;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17297899 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7226;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17298031 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4955;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17298076 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0069;AVGPOST=0.9996;RSQ=0.9750;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 17298099 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.728;LDAF=0.0021;AVGPOST=0.9974;RSQ=0.4958;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17298247 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0114;AVGPOST=0.9982;RSQ=0.9367;ERATE=0.0004;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 17298254 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.0858;AVGPOST=0.9984;RSQ=0.9925;ERATE=0.0004;THETA=0.0025;AC=187;AN=2184 GT:DS:GL:BD 0.08562271 0
1 17298301 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0038;AVGPOST=0.9934;RSQ=0.3504;ERATE=0.0010;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17298354 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.873;LDAF=0.0030;AVGPOST=0.9988;RSQ=0.8337;ERATE=0.0005;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 17298381 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0027;AVGPOST=0.9978;RSQ=0.6711;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17298496 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.990;LDAF=0.3853;AVGPOST=0.9878;RSQ=0.9802;ERATE=0.0004;THETA=0.0004;AC=844;AN=2184 GT:DS:GL:BD 0.38644689 0
1 17298570 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0867;AVGPOST=0.9984;RSQ=0.9930;ERATE=0.0004;THETA=0.0004;AC=189;AN=2184 GT:DS:GL:BD 0.08653846 0
1 17298610 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.914;LDAF=0.0136;AVGPOST=0.9985;RSQ=0.9526;ERATE=0.0004;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 17298668 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0039;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17298680 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0420;AVGPOST=0.9996;RSQ=0.9968;ERATE=0.0003;THETA=0.0009;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 17298726 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0389;AVGPOST=0.9997;RSQ=0.9969;ERATE=0.0003;THETA=0.0003;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 17298729 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17298751 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0526;AVGPOST=0.9999;RSQ=0.9989;ERATE=0.0003;THETA=0.0005;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 17298779 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9775;ERATE=0.0005;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 17298786 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9328;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17298790 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17298832 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17298924 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17298926 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17298984 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17299009 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0091;AVGPOST=0.9992;RSQ=0.9596;ERATE=0.0003;THETA=0.0010;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 17299013 . CA C 18798 PASS INDEL;BAVGPOST=0.906;BRSQ=0.239;LDAF=0.8952;AVGPOST=0.8429;RSQ=0.3248;ERATE=0.0117;THETA=0.0007;AC=2076;AN=2184 GT:DS:GL:BD 0.95054942 1
1 17299014 . A ACC 10932 PASS INDEL;BAVGPOST=0.926;BRSQ=0.324;LDAF=0.8882;AVGPOST=0.8409;RSQ=0.3464;ERATE=0.0157;THETA=0.0009;AC=2074;AN=2184 GT:DS:GL:BD 0.94963372 1
1 17299065 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8156;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17299127 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.959;LDAF=0.0388;AVGPOST=0.9990;RSQ=0.9915;ERATE=0.0004;THETA=0.0003;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 17299128 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.966;LDAF=0.0498;AVGPOST=0.9979;RSQ=0.9840;ERATE=0.0004;THETA=0.0003;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 17299145 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0053;AVGPOST=0.9988;RSQ=0.9026;ERATE=0.0004;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 17299164 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8057;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17299212 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4596;ERATE=0.0005;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17299272 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.830;LDAF=0.0120;AVGPOST=0.9936;RSQ=0.7989;ERATE=0.0007;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 17299335 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0020;AVGPOST=0.9984;RSQ=0.6508;ERATE=0.0013;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17299413 . T TAAC 62 PASS INDEL;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5938;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17299442 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.0523;AVGPOST=0.9991;RSQ=0.9938;ERATE=0.0004;THETA=0.0019;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 17299479 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.893;LDAF=0.0113;AVGPOST=0.9974;RSQ=0.9159;ERATE=0.0004;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 17299514 . CAGGT C 306 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0041;AVGPOST=0.9990;RSQ=0.8846;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 17299669 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.672;LDAF=0.0024;AVGPOST=0.9982;RSQ=0.6938;ERATE=0.0005;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17299721 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.799;LDAF=0.0023;AVGPOST=0.9982;RSQ=0.6433;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17299727 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.986;LDAF=0.7861;AVGPOST=0.9919;RSQ=0.9806;ERATE=0.0007;THETA=0.0043;AC=1718;AN=2184 GT:DS:GL:BD 0.78663003 1
1 17299941 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0381;AVGPOST=0.9988;RSQ=0.9905;ERATE=0.0004;THETA=0.0089;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 17299983 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.976;LDAF=0.0554;AVGPOST=0.9942;RSQ=0.9560;ERATE=0.0024;THETA=0.0009;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 17300039 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.583;LDAF=0.0042;AVGPOST=0.9947;RSQ=0.5225;ERATE=0.0011;THETA=0.0017;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 17300077 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0134;AVGPOST=0.9993;RSQ=0.9782;ERATE=0.0004;THETA=0.0043;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 17300108 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0412;AVGPOST=0.9996;RSQ=0.9960;ERATE=0.0003;THETA=0.0006;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 17300214 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.977;LDAF=0.0414;AVGPOST=0.9989;RSQ=0.9894;ERATE=0.0005;THETA=0.0004;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 17300433 . A AT 869 PASS INDEL;BAVGPOST=0.975;BRSQ=0.771;LDAF=0.0708;AVGPOST=0.9583;RSQ=0.7691;ERATE=0.0016;THETA=0.0007;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 17300469 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.889;LDAF=0.0781;AVGPOST=0.9464;RSQ=0.7486;ERATE=0.0030;THETA=0.0090;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 17300606 . CCAAA C 625 PASS INDEL;BAVGPOST=0.968;BRSQ=0.677;LDAF=0.0788;AVGPOST=0.9327;RSQ=0.6671;ERATE=0.0034;THETA=0.0011;AC=123;AN=2184 GT:DS:GL:BD 0.05631868 0
1 17301448 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.986;LDAF=0.3742;AVGPOST=0.9924;RSQ=0.9876;ERATE=0.0005;THETA=0.0007;AC=820;AN=2184 GT:DS:GL:BD 0.37545788 0
1 17301623 . GC G 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4734;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17301672 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3628;AVGPOST=0.9990;RSQ=0.9982;ERATE=0.0004;THETA=0.0044;AC=790;AN=2184 GT:DS:GL:BD 0.36172161 0
1 17301780 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.987;LDAF=0.4234;AVGPOST=0.9911;RSQ=0.9858;ERATE=0.0167;THETA=0.0014;AC=922;AN=2184 GT:DS:GL:BD 0.42216116 0
1 17301832 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17301900 rs3830850 AGACAGAACCTGGCACGGGAGCCCG A 8916 PASS INDEL;BAVGPOST=0.940;BRSQ=0.885;LDAF=0.4133;AVGPOST=0.9264;RSQ=0.8790;ERATE=0.0052;THETA=0.0075;AC=914;AN=2184 GT:DS:GL:BD 0.41849816 0
1 17302005 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0146;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0020;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 17302110 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17302173 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17302219 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17302220 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17302268 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=1.0000;RSQ=0.9941;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 17302308 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0417;AVGPOST=0.9998;RSQ=0.9978;ERATE=0.0003;THETA=0.0047;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 17302324 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0027;AVGPOST=0.9998;RSQ=0.9682;ERATE=0.0006;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 17302374 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.9228;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17302411 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0417;AVGPOST=0.9998;RSQ=0.9981;ERATE=0.0004;THETA=0.0057;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 17302633 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0101;AVGPOST=0.9984;RSQ=0.9478;ERATE=0.0004;THETA=0.0010;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 17302835 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0115;AVGPOST=0.9999;RSQ=0.9964;ERATE=0.0004;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 17302988 . G GC 132 PASS INDEL;BAVGPOST=1.000;BRSQ=0.713;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4808;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17303164 rs111744289 CAGG C 5052 PASS INDEL;BAVGPOST=0.996;BRSQ=0.962;LDAF=0.0491;AVGPOST=0.9961;RSQ=0.9691;ERATE=0.0005;THETA=0.0005;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 17303189 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17303318 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17303361 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.9131;ERATE=0.0003;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 17303589 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3887;AVGPOST=0.9974;RSQ=0.9957;ERATE=0.0018;THETA=0.0007;AC=847;AN=2184 GT:DS:GL:BD 0.38782051 0
1 17303609 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17303630 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0027;AVGPOST=0.9998;RSQ=0.9407;ERATE=0.0005;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 17303651 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17303652 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8797;ERATE=0.0007;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17303713 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.743;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8190;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17303747 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0017;AVGPOST=0.9996;RSQ=0.9254;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17303792 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.988;LDAF=0.7974;AVGPOST=0.9920;RSQ=0.9814;ERATE=0.0026;THETA=0.0004;AC=1746;AN=2184 GT:DS:GL:BD 0.79945058 1
1 17304025 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0117;AVGPOST=0.9994;RSQ=0.9771;ERATE=0.0003;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 17304051 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0041;AVGPOST=0.9998;RSQ=0.9741;ERATE=0.0003;THETA=0.0011;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 17304067 . AC A 6 PASS INDEL;BAVGPOST=0.998;BRSQ=0.644;LDAF=0.0018;AVGPOST=0.9974;RSQ=0.4189;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17304111 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8220;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17304145 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0096;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 17304333 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.0037;AVGPOST=0.9984;RSQ=0.8304;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 17304366 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5682;ERATE=0.0005;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17304381 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17304487 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17304636 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17304642 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8710;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17304643 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0173;AVGPOST=0.9998;RSQ=0.9956;ERATE=0.0003;THETA=0.0007;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 17304787 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17304823 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7995;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17304887 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17305077 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.766;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6585;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17305098 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17305152 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0022;AVGPOST=0.9978;RSQ=0.6060;ERATE=0.0005;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17305263 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.666;LDAF=0.0038;AVGPOST=0.9950;RSQ=0.4685;ERATE=0.0009;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17305336 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17305349 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.746;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6131;ERATE=0.0005;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17305369 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0096;AVGPOST=0.9990;RSQ=0.9497;ERATE=0.0006;THETA=0.0020;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 17305417 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.775;LDAF=0.0023;AVGPOST=0.9962;RSQ=0.2793;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17305473 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0010;AVGPOST=0.9986;RSQ=0.3555;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17305480 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0376;AVGPOST=0.9983;RSQ=0.9838;ERATE=0.0003;THETA=0.0021;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 17305563 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.733;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.4326;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17305603 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17305705 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0044;AVGPOST=0.9984;RSQ=0.8315;ERATE=0.0006;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 17305760 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0091;AVGPOST=0.9994;RSQ=0.9700;ERATE=0.0004;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 17305820 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.7367;AVGPOST=0.9941;RSQ=0.9890;ERATE=0.0006;THETA=0.0004;AC=1611;AN=2184 GT:DS:GL:BD 0.73763734 1
1 17305837 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0089;AVGPOST=0.9984;RSQ=0.9329;ERATE=0.0005;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 17305903 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.973;LDAF=0.7889;AVGPOST=0.9864;RSQ=0.9702;ERATE=0.0029;THETA=0.0006;AC=1730;AN=2184 GT:DS:GL:BD 0.79212457 1
1 17305963 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.792;LDAF=0.0032;AVGPOST=0.9981;RSQ=0.7392;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17306029 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.3346;AVGPOST=0.9900;RSQ=0.9836;ERATE=0.0012;THETA=0.0027;AC=731;AN=2184 GT:DS:GL:BD 0.33470696 0
1 17306120 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0098;AVGPOST=0.9982;RSQ=0.9337;ERATE=0.0005;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 17306240 . T TG 11 PASS INDEL;BAVGPOST=0.999;BRSQ=0.576;LDAF=0.0032;AVGPOST=0.9964;RSQ=0.5163;ERATE=0.0009;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17306454 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.667;LDAF=0.0227;AVGPOST=0.9948;RSQ=0.9091;ERATE=0.0008;THETA=0.0005;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 17306591 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.458;LDAF=0.0300;AVGPOST=0.9835;RSQ=0.7838;ERATE=0.0011;THETA=0.0003;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 17306593 . G GC 6008 PASS INDEL;BAVGPOST=0.926;BRSQ=0.853;LDAF=0.3468;AVGPOST=0.9147;RSQ=0.8669;ERATE=0.0023;THETA=0.0003;AC=740;AN=2184 GT:DS:GL:BD 0.33882785 0
1 17306595 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.933;BRSQ=0.868;LDAF=0.3194;AVGPOST=0.9576;RSQ=0.9335;ERATE=0.0013;THETA=0.0018;AC=710;AN=2184 GT:DS:GL:BD 0.32509157 0
1 17306596 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.937;BRSQ=0.875;LDAF=0.3214;AVGPOST=0.9546;RSQ=0.9291;ERATE=0.0016;THETA=0.0005;AC=715;AN=2184 GT:DS:GL:BD 0.32738096 0
1 17306675 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.976;LDAF=0.3397;AVGPOST=0.9769;RSQ=0.9626;ERATE=0.0025;THETA=0.0003;AC=737;AN=2184 GT:DS:GL:BD 0.33745420 0
1 17306699 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.978;LDAF=0.0411;AVGPOST=0.9961;RSQ=0.9622;ERATE=0.0006;THETA=0.0009;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 17306762 rs60000302 AC A 1866 PASS INDEL;BAVGPOST=0.662;BRSQ=0.033;LDAF=0.7148;AVGPOST=0.5982;RSQ=0.1530;ERATE=0.0397;THETA=0.0004;AC=1945;AN=2184 GT:DS:GL:BD 0.89056778 1
1 17306764 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.775;BRSQ=0.420;LDAF=0.2918;AVGPOST=0.7025;RSQ=0.3988;ERATE=0.0310;THETA=0.0006;AC=469;AN=2184 GT:DS:GL:BD 0.21474358 0
1 17306774 . CA C 909 PASS INDEL;BAVGPOST=0.430;BRSQ=0.043;LDAF=0.3694;AVGPOST=0.5951;RSQ=0.2451;ERATE=0.0327;THETA=0.0004;AC=524;AN=2184 GT:DS:GL:BD 0.23992674 0
1 17306870 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.980;LDAF=0.3368;AVGPOST=0.9835;RSQ=0.9724;ERATE=0.0016;THETA=0.0005;AC=736;AN=2184 GT:DS:GL:BD 0.33699635 0
1 17306923 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.957;LDAF=0.4540;AVGPOST=0.9777;RSQ=0.9658;ERATE=0.0020;THETA=0.0009;AC=989;AN=2184 GT:DS:GL:BD 0.45283884 0
1 17306948 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.973;LDAF=0.4638;AVGPOST=0.9792;RSQ=0.9675;ERATE=0.0016;THETA=0.0037;AC=1014;AN=2184 GT:DS:GL:BD 0.46428570 0
1 17307221 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.309;LDAF=0.0123;AVGPOST=0.9830;RSQ=0.4315;ERATE=0.0026;THETA=0.0051;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 17307229 . GGGCC G 185 PASS INDEL;BAVGPOST=0.991;BRSQ=0.442;LDAF=0.0121;AVGPOST=0.9874;RSQ=0.6161;ERATE=0.0008;THETA=0.0008;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 17307473 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0044;AVGPOST=0.9979;RSQ=0.7790;ERATE=0.0008;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 17307687 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5165;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17307774 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17307923 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.856;LDAF=0.0111;AVGPOST=0.9977;RSQ=0.9183;ERATE=0.0003;THETA=0.0017;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 17307933 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8639;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17307970 . AGCCCT A 2788 PASS INDEL;BAVGPOST=0.997;BRSQ=0.916;LDAF=0.0187;AVGPOST=0.9950;RSQ=0.8956;ERATE=0.0007;THETA=0.0008;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 17308158 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3612;AVGPOST=0.9897;RSQ=0.9843;ERATE=0.0012;THETA=0.0005;AC=785;AN=2184 GT:DS:GL:BD 0.35943222 0
1 17308254 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.3349;AVGPOST=0.9912;RSQ=0.9869;ERATE=0.0007;THETA=0.0004;AC=728;AN=2184 GT:DS:GL:BD 0.33333334 0
1 17308271 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.893;LDAF=0.0168;AVGPOST=0.9951;RSQ=0.8855;ERATE=0.0004;THETA=0.0006;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 17308303 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7490;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17308354 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.5713;ERATE=0.0004;THETA=0.0034;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17308403 . TTTC T 21 PASS INDEL;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0023;AVGPOST=0.9969;RSQ=0.5007;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17308427 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0038;AVGPOST=0.9980;RSQ=0.7949;ERATE=0.0005;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 17308652 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0082;AVGPOST=0.9989;RSQ=0.9477;ERATE=0.0005;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 17308781 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6343;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17308885 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0062;AVGPOST=0.9964;RSQ=0.7714;ERATE=0.0005;THETA=0.0013;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 17308939 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0312;AVGPOST=0.9979;RSQ=0.9706;ERATE=0.0004;THETA=0.0003;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 17309003 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0023;AVGPOST=0.9980;RSQ=0.6868;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17309069 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.630;LDAF=0.0021;AVGPOST=0.9966;RSQ=0.2824;ERATE=0.0007;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17309327 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.954;LDAF=0.1080;AVGPOST=0.9911;RSQ=0.9712;ERATE=0.0009;THETA=0.0007;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 17309379 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.691;LDAF=0.0040;AVGPOST=0.9952;RSQ=0.4916;ERATE=0.0010;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17309387 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.936;LDAF=0.0183;AVGPOST=0.9990;RSQ=0.9778;ERATE=0.0003;THETA=0.0013;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 17309452 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.488;LDAF=0.0044;AVGPOST=0.9968;RSQ=0.6965;ERATE=0.0007;THETA=0.0065;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 17309540 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.986;LDAF=0.3632;AVGPOST=0.9936;RSQ=0.9895;ERATE=0.0009;THETA=0.0046;AC=793;AN=2184 GT:DS:GL:BD 0.36309522 0
1 17309546 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.963;LDAF=0.0556;AVGPOST=0.9934;RSQ=0.9638;ERATE=0.0012;THETA=0.0004;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 17309598 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.6855;ERATE=0.0011;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17309633 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0044;AVGPOST=0.9992;RSQ=0.9192;ERATE=0.0004;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 17309718 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.969;LDAF=0.3444;AVGPOST=0.9908;RSQ=0.9857;ERATE=0.0008;THETA=0.0002;AC=754;AN=2184 GT:DS:GL:BD 0.34523809 0
1 17309760 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0020;AVGPOST=0.9981;RSQ=0.6682;ERATE=0.0006;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17309762 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5667;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17309775 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0087;AVGPOST=0.9995;RSQ=0.9780;ERATE=0.0003;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 17309788 . A AG 1063 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0094;AVGPOST=0.9991;RSQ=0.9545;ERATE=0.0005;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 17309899 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.750;LDAF=0.0019;AVGPOST=0.9996;RSQ=0.9014;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17309901 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0037;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17310019 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.8121;AVGPOST=0.9963;RSQ=0.9904;ERATE=0.0004;THETA=0.0002;AC=1775;AN=2184 GT:DS:GL:BD 0.81272894 1
1 17310276 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0107;AVGPOST=0.9978;RSQ=0.9148;ERATE=0.0004;THETA=0.0011;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 17310539 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0031;AVGPOST=0.9980;RSQ=0.7616;ERATE=0.0004;THETA=0.0033;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 17310701 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.666;LDAF=0.0063;AVGPOST=0.9947;RSQ=0.6492;ERATE=0.0007;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 17310717 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0139;AVGPOST=0.9973;RSQ=0.9187;ERATE=0.0010;THETA=0.0006;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 17310802 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.931;BRSQ=0.379;LDAF=0.9228;AVGPOST=0.8923;RSQ=0.4041;ERATE=0.0283;THETA=0.0005;AC=2099;AN=2184 GT:DS:GL:BD 0.96108061 1
1 17310844 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.913;LDAF=0.0106;AVGPOST=0.9991;RSQ=0.9626;ERATE=0.0004;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 17311021 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5223;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17311190 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3496;AVGPOST=0.9937;RSQ=0.9902;ERATE=0.0006;THETA=0.0006;AC=761;AN=2184 GT:DS:GL:BD 0.34844321 0
1 17311429 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0085;AVGPOST=0.9984;RSQ=0.9251;ERATE=0.0006;THETA=0.0030;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 17311521 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0071;AVGPOST=0.9988;RSQ=0.9294;ERATE=0.0004;THETA=0.0008;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 17311535 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.823;LDAF=0.0120;AVGPOST=0.9963;RSQ=0.8754;ERATE=0.0005;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 17311552 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.978;LDAF=0.0441;AVGPOST=0.9973;RSQ=0.9788;ERATE=0.0004;THETA=0.0058;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 17311582 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0030;AVGPOST=0.9985;RSQ=0.7782;ERATE=0.0005;THETA=0.0036;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17311595 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0061;AVGPOST=0.9982;RSQ=0.8822;ERATE=0.0005;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 17311882 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.974;LDAF=0.5008;AVGPOST=0.9845;RSQ=0.9769;ERATE=0.0008;THETA=0.0020;AC=1087;AN=2184 GT:DS:GL:BD 0.49771062 0
1 17311901 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.981;LDAF=0.3599;AVGPOST=0.9807;RSQ=0.9685;ERATE=0.0018;THETA=0.0047;AC=785;AN=2184 GT:DS:GL:BD 0.35943222 0
1 17311920 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0098;AVGPOST=0.9912;RSQ=0.6206;ERATE=0.0010;THETA=0.0035;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 17311943 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.714;LDAF=0.0030;AVGPOST=0.9969;RSQ=0.5904;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17312146 rs78848625 A AG 846 PASS INDEL;BAVGPOST=0.974;BRSQ=0.469;LDAF=0.0323;AVGPOST=0.9655;RSQ=0.5675;ERATE=0.0024;THETA=0.0008;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 17312242 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.922;LDAF=0.0105;AVGPOST=0.9976;RSQ=0.9008;ERATE=0.0005;THETA=0.0007;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 17312485 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0050;AVGPOST=0.9981;RSQ=0.8517;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 17312558 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9535;ERATE=0.0004;THETA=0.0133;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17312586 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8295;ERATE=0.0015;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17312592 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.938;LDAF=0.0190;AVGPOST=0.9985;RSQ=0.9694;ERATE=0.0003;THETA=0.0069;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 17312596 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9464;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 17312743 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.990;LDAF=0.3547;AVGPOST=0.9945;RSQ=0.9914;ERATE=0.0014;THETA=0.0008;AC=772;AN=2184 GT:DS:GL:BD 0.35347986 0
1 17312806 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.782;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5655;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17312829 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0114;AVGPOST=0.9983;RSQ=0.9463;ERATE=0.0009;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 17312867 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9792;ERATE=0.0004;THETA=0.0016;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 17313021 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17313036 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17313049 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0043;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17313157 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3612;AVGPOST=0.9992;RSQ=0.9985;ERATE=0.0004;THETA=0.0006;AC=787;AN=2184 GT:DS:GL:BD 0.36034799 0
1 17313161 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7870;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17313214 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0205;AVGPOST=0.9985;RSQ=0.9693;ERATE=0.0004;THETA=0.0004;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 17313244 rs56309044 CCCCAGGGCTCCT C 17786 PASS INDEL;BAVGPOST=0.914;BRSQ=0.836;LDAF=0.2962;AVGPOST=0.9204;RSQ=0.8677;ERATE=0.0042;THETA=0.0002;AC=662;AN=2184 GT:DS:GL:BD 0.30311355 0
1 17313279 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0036;AVGPOST=0.9996;RSQ=0.9503;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 17313283 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0144;AVGPOST=0.9995;RSQ=0.9859;ERATE=0.0003;THETA=0.0013;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 17313328 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17313343 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.3589;AVGPOST=0.9919;RSQ=0.9885;ERATE=0.0064;THETA=0.0005;AC=777;AN=2184 GT:DS:GL:BD 0.35576922 0
1 17313391 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0352;AVGPOST=1.0000;RSQ=0.9994;ERATE=0.0003;THETA=0.0016;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 17313448 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9717;ERATE=0.0011;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17313454 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3258;AVGPOST=0.9998;RSQ=0.9996;ERATE=0.0003;THETA=0.0005;AC=713;AN=2184 GT:DS:GL:BD 0.32646519 0
1 17313481 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17313486 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17313517 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0144;AVGPOST=0.9995;RSQ=0.9846;ERATE=0.0004;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 17313584 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.837;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8967;ERATE=0.0004;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17313652 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5993;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17313654 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.3613;AVGPOST=0.9950;RSQ=0.9920;ERATE=0.0024;THETA=0.0003;AC=786;AN=2184 GT:DS:GL:BD 0.35989010 0
1 17313682 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17313813 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0004;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17313986 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0129;AVGPOST=0.9998;RSQ=0.9937;ERATE=0.0003;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 17314073 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3266;AVGPOST=0.9987;RSQ=0.9975;ERATE=0.0005;THETA=0.0006;AC=715;AN=2184 GT:DS:GL:BD 0.32738096 0
1 17314088 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5799;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17314242 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0129;AVGPOST=0.9998;RSQ=0.9923;ERATE=0.0003;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 17314317 . C CG 37 PASS INDEL;BAVGPOST=0.999;BRSQ=0.562;LDAF=0.0035;AVGPOST=0.9962;RSQ=0.5019;ERATE=0.0009;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17314324 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0128;AVGPOST=0.9996;RSQ=0.9877;ERATE=0.0004;THETA=0.0008;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 17314383 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0122;AVGPOST=0.9994;RSQ=0.9776;ERATE=0.0004;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 17314409 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0002;AVGPOST=0.9996;RSQ=0.0497;ERATE=0.0004;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 17314600 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0012;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17314633 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17314702 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3077;AVGPOST=0.9997;RSQ=0.9995;ERATE=0.0003;THETA=0.0004;AC=673;AN=2184 GT:DS:GL:BD 0.30815017 0
1 17314745 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0128;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 17314767 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.8031;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17314786 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0128;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 17314788 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0128;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 17314791 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17314855 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 17314870 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17314916 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17314942 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3521;AVGPOST=0.9991;RSQ=0.9987;ERATE=0.0004;THETA=0.0004;AC=767;AN=2184 GT:DS:GL:BD 0.35119048 0
1 17315013 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17315089 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0128;AVGPOST=1.0000;RSQ=0.9984;ERATE=0.0003;THETA=0.0006;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 17315090 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17315107 . AATT A 13 PASS INDEL;BAVGPOST=0.997;BRSQ=0.596;LDAF=0.0057;AVGPOST=0.9921;RSQ=0.4400;ERATE=0.0017;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17315123 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9484;ERATE=0.0004;THETA=0.0042;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 17315220 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0182;AVGPOST=0.9900;RSQ=0.7833;ERATE=0.0011;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 17315242 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.934;LDAF=0.3170;AVGPOST=0.9848;RSQ=0.9719;ERATE=0.0021;THETA=0.0005;AC=701;AN=2184 GT:DS:GL:BD 0.32097068 0
1 17315284 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.859;LDAF=0.0216;AVGPOST=0.9888;RSQ=0.7982;ERATE=0.0010;THETA=0.0003;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 17315414 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0031;AVGPOST=0.9969;RSQ=0.5768;ERATE=0.0007;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17315425 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.990;LDAF=0.3952;AVGPOST=0.9949;RSQ=0.9912;ERATE=0.0006;THETA=0.0005;AC=863;AN=2184 GT:DS:GL:BD 0.39514652 0
1 17315552 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0129;AVGPOST=0.9998;RSQ=0.9922;ERATE=0.0004;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 17315720 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0043;AVGPOST=0.9978;RSQ=0.7742;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 17315730 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.971;LDAF=0.0185;AVGPOST=0.9973;RSQ=0.9418;ERATE=0.0006;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 17315788 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5492;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17315790 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0071;AVGPOST=0.9939;RSQ=0.6850;ERATE=0.0006;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 17315836 . AGCTGG A 1236 PASS INDEL;BAVGPOST=0.995;BRSQ=0.730;LDAF=0.0113;AVGPOST=0.9930;RSQ=0.7473;ERATE=0.0006;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 17315921 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.836;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7895;ERATE=0.0005;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17316068 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0053;AVGPOST=0.9994;RSQ=0.9664;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 17316373 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8176;ERATE=0.0004;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17316577 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 17316655 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17316667 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9809;ERATE=0.0011;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17316686 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17316771 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17316794 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17316821 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17316822 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17316862 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0055;AVGPOST=0.9999;RSQ=0.9920;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 17316967 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.945;LDAF=0.0109;AVGPOST=0.9983;RSQ=0.9426;ERATE=0.0004;THETA=0.0008;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 17317110 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.378;LDAF=0.0032;AVGPOST=0.9959;RSQ=0.5284;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17317180 rs66518274 A AT 20637 PASS INDEL;BAVGPOST=0.982;BRSQ=0.961;LDAF=0.3080;AVGPOST=0.9488;RSQ=0.9115;ERATE=0.0109;THETA=0.0004;AC=673;AN=2184 GT:DS:GL:BD 0.30815017 0
1 17317208 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.694;LDAF=0.0026;AVGPOST=0.9969;RSQ=0.4712;ERATE=0.0008;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17317352 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0109;AVGPOST=0.9992;RSQ=0.9740;ERATE=0.0003;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 17317363 . AAT A 53 PASS INDEL;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6409;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17317395 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.854;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5938;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17317506 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6012;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17317540 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.624;LDAF=0.0054;AVGPOST=0.9955;RSQ=0.6027;ERATE=0.0008;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 17317543 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0159;AVGPOST=0.9973;RSQ=0.9316;ERATE=0.0004;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 17317709 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4990;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17317715 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0132;AVGPOST=0.9992;RSQ=0.9726;ERATE=0.0005;THETA=0.0009;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 17317768 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.928;LDAF=0.0085;AVGPOST=0.9979;RSQ=0.9064;ERATE=0.0003;THETA=0.0028;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 17318015 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.625;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6525;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17318065 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3082;AVGPOST=0.9988;RSQ=0.9977;ERATE=0.0003;THETA=0.0003;AC=675;AN=2184 GT:DS:GL:BD 0.30906594 0
1 17318093 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9331;ERATE=0.0006;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17318167 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0124;AVGPOST=0.9999;RSQ=0.9950;ERATE=0.0003;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 17318184 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9775;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 17318197 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9165;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17318282 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17318290 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17318346 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17318366 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17318448 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0068;AVGPOST=0.9995;RSQ=0.9757;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 17318460 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17318537 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9822;ERATE=0.0003;THETA=0.0014;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 17318787 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17318817 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17318925 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8648;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17318959 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17318983 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17319004 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17319011 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4580;AVGPOST=0.9998;RSQ=0.9997;ERATE=0.0003;THETA=0.0003;AC=999;AN=2184 GT:DS:GL:BD 0.45741758 0
1 17319071 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0500;ERATE=0.0003;THETA=0.0025;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 17319144 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9756;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17319264 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8538;ERATE=0.0006;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17319287 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4580;AVGPOST=0.9989;RSQ=0.9981;ERATE=0.0005;THETA=0.0002;AC=999;AN=2184 GT:DS:GL:BD 0.45741758 0
1 17319373 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9767;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 17319494 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.643;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4793;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17319623 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6526;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17319639 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4096;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17319770 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0106;AVGPOST=0.9988;RSQ=0.9605;ERATE=0.0004;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 17319804 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0058;AVGPOST=0.9989;RSQ=0.9220;ERATE=0.0004;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 17319876 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.740;LDAF=0.0025;AVGPOST=0.9976;RSQ=0.6057;ERATE=0.0007;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17320091 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17320169 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17320239 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5993;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17320256 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.752;LDAF=0.0150;AVGPOST=0.9889;RSQ=0.7026;ERATE=0.0057;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 17320259 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0042;AVGPOST=0.9972;RSQ=0.7052;ERATE=0.0016;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 17320356 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.802;LDAF=0.0030;AVGPOST=0.9983;RSQ=0.7784;ERATE=0.0005;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17320530 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.713;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6882;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17320663 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.762;LDAF=0.0019;AVGPOST=0.9973;RSQ=0.4371;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17320669 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0421;AVGPOST=0.9994;RSQ=0.9939;ERATE=0.0004;THETA=0.0005;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 17320681 . T TCG 2422 PASS INDEL;BAVGPOST=0.993;BRSQ=0.795;LDAF=0.0242;AVGPOST=0.9844;RSQ=0.7417;ERATE=0.0020;THETA=0.0008;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 17320685 . T TCTCTCTCTCC 17904 PASS INDEL;BAVGPOST=0.929;BRSQ=0.852;LDAF=0.2953;AVGPOST=0.9417;RSQ=0.8973;ERATE=0.0071;THETA=0.0006;AC=661;AN=2184 GT:DS:GL:BD 0.30265567 0
1 17320691 . TCA T 66 PASS INDEL;BAVGPOST=0.998;BRSQ=0.488;LDAF=0.0042;AVGPOST=0.9960;RSQ=0.5750;ERATE=0.0005;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 17320751 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.732;LDAF=0.0016;AVGPOST=0.9976;RSQ=0.3841;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17320814 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.536;LDAF=0.0030;AVGPOST=0.9949;RSQ=0.2790;ERATE=0.0007;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17320917 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.480;LDAF=0.0050;AVGPOST=0.9927;RSQ=0.4841;ERATE=0.0008;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17321046 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.652;LDAF=0.0026;AVGPOST=0.9981;RSQ=0.6676;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17321131 . A AT 122 PASS INDEL;BAVGPOST=0.997;BRSQ=0.654;LDAF=0.0057;AVGPOST=0.9932;RSQ=0.6153;ERATE=0.0007;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 17321170 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.932;LDAF=0.0136;AVGPOST=0.9971;RSQ=0.9143;ERATE=0.0005;THETA=0.0009;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 17321208 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.913;LDAF=0.1026;AVGPOST=0.9806;RSQ=0.9228;ERATE=0.0023;THETA=0.0004;AC=212;AN=2184 GT:DS:GL:BD 0.09706960 0
1 17321271 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0423;AVGPOST=0.9991;RSQ=0.9907;ERATE=0.0004;THETA=0.0008;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 17321417 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.479;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4488;ERATE=0.0005;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17321428 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.974;LDAF=0.3090;AVGPOST=0.9903;RSQ=0.9823;ERATE=0.0009;THETA=0.0004;AC=676;AN=2184 GT:DS:GL:BD 0.30952382 0
1 17321449 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.648;LDAF=0.0051;AVGPOST=0.9985;RSQ=0.8665;ERATE=0.0007;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 17321512 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.791;LDAF=0.0278;AVGPOST=0.9901;RSQ=0.8654;ERATE=0.0008;THETA=0.0004;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 17321622 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0021;AVGPOST=0.9991;RSQ=0.8079;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17321670 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0018;AVGPOST=0.9979;RSQ=0.4844;ERATE=0.0010;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17321679 . CTCACTGAGG C 340 PASS INDEL;BAVGPOST=0.999;BRSQ=0.705;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6819;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17321820 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0128;AVGPOST=0.9992;RSQ=0.9750;ERATE=0.0003;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 17321940 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.813;LDAF=0.0110;AVGPOST=0.9973;RSQ=0.8930;ERATE=0.0006;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 17321988 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0131;AVGPOST=0.9984;RSQ=0.9457;ERATE=0.0006;THETA=0.0008;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 17322009 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17322067 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0125;AVGPOST=0.9991;RSQ=0.9706;ERATE=0.0004;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 17322397 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9261;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17322437 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17322577 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17322683 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17322690 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17322708 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17322793 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.9073;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17322839 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17322943 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17323005 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17323070 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9858;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 17323198 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3084;AVGPOST=0.9984;RSQ=0.9972;ERATE=0.0003;THETA=0.0005;AC=675;AN=2184 GT:DS:GL:BD 0.30906594 0
1 17323268 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.979;LDAF=0.0581;AVGPOST=0.9976;RSQ=0.9841;ERATE=0.0004;THETA=0.0006;AC=126;AN=2184 GT:DS:GL:BD 0.05769231 0
1 17323271 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4946;ERATE=0.0004;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17323316 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0162;AVGPOST=0.9992;RSQ=0.9791;ERATE=0.0003;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 17323367 . G GT 3043 PASS INDEL;BAVGPOST=0.929;BRSQ=0.826;LDAF=0.2308;AVGPOST=0.9335;RSQ=0.8696;ERATE=0.0009;THETA=0.0008;AC=510;AN=2184 GT:DS:GL:BD 0.23351648 0
1 17323369 . G GT 3208 PASS INDEL;BAVGPOST=0.929;BRSQ=0.827;LDAF=0.2299;AVGPOST=0.9379;RSQ=0.8794;ERATE=0.0006;THETA=0.0003;AC=509;AN=2184 GT:DS:GL:BD 0.23305860 0
1 17323371 . G GC 2842 PASS INDEL;BAVGPOST=0.930;BRSQ=0.830;LDAF=0.2294;AVGPOST=0.9383;RSQ=0.8797;ERATE=0.0006;THETA=0.0006;AC=507;AN=2184 GT:DS:GL:BD 0.23214285 0
1 17323372 . G GA 2973 PASS INDEL;BAVGPOST=0.930;BRSQ=0.828;LDAF=0.2374;AVGPOST=0.9331;RSQ=0.8702;ERATE=0.0010;THETA=0.0002;AC=527;AN=2184 GT:DS:GL:BD 0.24130036 0
1 17323433 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0424;AVGPOST=0.9994;RSQ=0.9940;ERATE=0.0003;THETA=0.0004;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 17323449 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.8151;AVGPOST=0.9989;RSQ=0.9968;ERATE=0.0003;THETA=0.0009;AC=1781;AN=2184 GT:DS:GL:BD 0.81547618 1
1 17323479 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17323505 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0052;AVGPOST=0.9997;RSQ=0.9790;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 17323506 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0101;AVGPOST=0.9995;RSQ=0.9775;ERATE=0.0020;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 17323540 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6913;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17323602 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9406;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17323753 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0032;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17323773 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17323909 . C CG 361 PASS INDEL;BAVGPOST=0.752;BRSQ=0.185;LDAF=0.2521;AVGPOST=0.6931;RSQ=0.3339;ERATE=0.0346;THETA=0.0004;AC=307;AN=2184 GT:DS:GL:BD 0.14056776 0
1 17323912 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.752;LDAF=0.0332;AVGPOST=0.9762;RSQ=0.7260;ERATE=0.0019;THETA=0.0003;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 17323914 . GGGGGT G 251 PASS INDEL;BAVGPOST=0.953;BRSQ=0.252;LDAF=0.0475;AVGPOST=0.9331;RSQ=0.4031;ERATE=0.0082;THETA=0.0043;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 17323929 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.701;LDAF=0.0029;AVGPOST=0.9979;RSQ=0.6854;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17323978 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.917;LDAF=0.0332;AVGPOST=0.9921;RSQ=0.9115;ERATE=0.0005;THETA=0.0008;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 17324002 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0027;AVGPOST=0.9986;RSQ=0.7759;ERATE=0.0006;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17324193 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.480;LDAF=0.0033;AVGPOST=0.9950;RSQ=0.4346;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17324197 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0120;AVGPOST=0.9980;RSQ=0.9335;ERATE=0.0004;THETA=0.0007;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 17324421 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.735;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7167;ERATE=0.0005;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17324537 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.992;LDAF=0.3098;AVGPOST=0.9928;RSQ=0.9874;ERATE=0.0008;THETA=0.0008;AC=678;AN=2184 GT:DS:GL:BD 0.31043956 0
1 17324634 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9721;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17324667 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.661;LDAF=0.0048;AVGPOST=0.9987;RSQ=0.8854;ERATE=0.0004;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 17324746 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0122;AVGPOST=0.9984;RSQ=0.9472;ERATE=0.0006;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 17324758 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.986;LDAF=0.1585;AVGPOST=0.9930;RSQ=0.9795;ERATE=0.0010;THETA=0.0071;AC=345;AN=2184 GT:DS:GL:BD 0.15796703 0
1 17324795 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0052;AVGPOST=0.9987;RSQ=0.8921;ERATE=0.0004;THETA=0.0026;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 17324812 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17325004 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0141;AVGPOST=0.9981;RSQ=0.9420;ERATE=0.0003;THETA=0.0010;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 17325172 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6633;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17325250 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4748;ERATE=0.0005;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17325397 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8041;ERATE=0.0006;THETA=0.0022;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17325451 . TG T 58 PASS INDEL;BAVGPOST=0.999;BRSQ=0.752;LDAF=0.0029;AVGPOST=0.9978;RSQ=0.7471;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 17325496 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0041;AVGPOST=0.9991;RSQ=0.9057;ERATE=0.0004;THETA=0.0035;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 17325558 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8006;ERATE=0.0005;THETA=0.0029;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17325702 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4176;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17325734 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7504;ERATE=0.0005;THETA=0.0098;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17325900 rs67210274 AG A 11677 PASS INDEL;BAVGPOST=0.971;BRSQ=0.939;LDAF=0.3014;AVGPOST=0.9740;RSQ=0.9507;ERATE=0.0036;THETA=0.0009;AC=662;AN=2184 GT:DS:GL:BD 0.30311355 0
1 17325955 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.2923;AVGPOST=0.9906;RSQ=0.9833;ERATE=0.0007;THETA=0.0011;AC=639;AN=2184 GT:DS:GL:BD 0.29258242 0
1 17325991 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7859;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17326131 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.9532;AVGPOST=0.9946;RSQ=0.9548;ERATE=0.0005;THETA=0.0005;AC=2083;AN=2184 GT:DS:GL:BD 0.95375460 1
1 17326171 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.848;LDAF=0.9367;AVGPOST=0.9706;RSQ=0.8108;ERATE=0.0074;THETA=0.0005;AC=2067;AN=2184 GT:DS:GL:BD 0.94642860 1
1 17326204 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0043;AVGPOST=0.9992;RSQ=0.9154;ERATE=0.0005;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 17326227 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0023;AVGPOST=0.9981;RSQ=0.6233;ERATE=0.0006;THETA=0.0034;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17326540 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0339;AVGPOST=0.9998;RSQ=0.9969;ERATE=0.0004;THETA=0.0012;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 17326629 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8154;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17326691 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0045;AVGPOST=0.9993;RSQ=0.9449;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 17326712 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0123;AVGPOST=0.9964;RSQ=0.8936;ERATE=0.0005;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 17326743 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5760;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17326767 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0088;AVGPOST=0.9998;RSQ=0.9877;ERATE=0.0003;THETA=0.0017;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 17326811 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17326869 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17326990 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17327062 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9763;ERATE=0.0003;THETA=0.0016;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 17327097 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0317;AVGPOST=0.9989;RSQ=0.9847;ERATE=0.0004;THETA=0.0007;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 17327098 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0315;AVGPOST=0.9993;RSQ=0.9902;ERATE=0.0003;THETA=0.0005;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 17327212 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5994;ERATE=0.0004;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17327266 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.665;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17327376 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0031;AVGPOST=0.9984;RSQ=0.8014;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17327393 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0037;AVGPOST=0.9988;RSQ=0.8595;ERATE=0.0004;THETA=0.0020;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 17327429 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3448;AVGPOST=0.9961;RSQ=0.9930;ERATE=0.0008;THETA=0.0003;AC=753;AN=2184 GT:DS:GL:BD 0.34478021 0
1 17327434 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.699;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.3690;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17327519 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.954;LDAF=0.0238;AVGPOST=0.9965;RSQ=0.9482;ERATE=0.0004;THETA=0.0006;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 17327742 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.630;LDAF=0.0120;AVGPOST=0.9879;RSQ=0.5671;ERATE=0.0014;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 17327767 . A AAAAAAAT 4474 PASS INDEL;BAVGPOST=0.781;BRSQ=0.587;LDAF=0.3338;AVGPOST=0.7625;RSQ=0.5707;ERATE=0.0353;THETA=0.0003;AC=642;AN=2184 GT:DS:GL:BD 0.29395604 0
1 17327769 . A AAAAAAAC 7532 PASS INDEL;BAVGPOST=0.782;BRSQ=0.586;LDAF=0.3247;AVGPOST=0.7493;RSQ=0.5364;ERATE=0.0492;THETA=0.0008;AC=602;AN=2184 GT:DS:GL:BD 0.27564102 0
1 17327842 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.809;LDAF=0.0037;AVGPOST=0.9975;RSQ=0.7248;ERATE=0.0005;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 17327860 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.752;LDAF=0.0064;AVGPOST=0.9959;RSQ=0.7497;ERATE=0.0006;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 17328200 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3444;AVGPOST=0.9986;RSQ=0.9973;ERATE=0.0004;THETA=0.0003;AC=751;AN=2184 GT:DS:GL:BD 0.34386447 0
1 17328210 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.861;LDAF=0.0213;AVGPOST=0.9937;RSQ=0.8946;ERATE=0.0005;THETA=0.0005;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 17328301 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.6097;AVGPOST=0.9970;RSQ=0.9950;ERATE=0.0005;THETA=0.0003;AC=1335;AN=2184 GT:DS:GL:BD 0.61126375 1
1 17328315 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.869;LDAF=0.0131;AVGPOST=0.9976;RSQ=0.9270;ERATE=0.0006;THETA=0.0013;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 17328352 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17328401 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17328489 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17328518 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0500;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 17328731 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0164;AVGPOST=0.9995;RSQ=0.9904;ERATE=0.0004;THETA=0.0010;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 17328838 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7493;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17328893 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17329181 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9025;ERATE=0.0003;THETA=0.0018;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17329185 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0088;AVGPOST=0.9997;RSQ=0.9828;ERATE=0.0003;THETA=0.0010;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 17329279 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17329306 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5717;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17329491 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6141;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17329610 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.800;LDAF=0.0027;AVGPOST=0.9977;RSQ=0.6282;ERATE=0.0006;THETA=0.0021;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17329621 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.395;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4109;ERATE=0.0009;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17329630 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.257;LDAF=0.0035;AVGPOST=0.9958;RSQ=0.5649;ERATE=0.0010;THETA=0.0017;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17329670 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.755;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.4773;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17329688 . TG T 305 PASS INDEL;BAVGPOST=0.998;BRSQ=0.779;LDAF=0.0040;AVGPOST=0.9972;RSQ=0.7012;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 17329815 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5441;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17329824 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0085;AVGPOST=0.9970;RSQ=0.8646;ERATE=0.0004;THETA=0.0009;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 17329826 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.870;LDAF=0.0038;AVGPOST=0.9985;RSQ=0.8187;ERATE=0.0006;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 17329968 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.894;LDAF=0.0135;AVGPOST=0.9970;RSQ=0.9022;ERATE=0.0007;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 17330008 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0044;AVGPOST=0.9980;RSQ=0.8154;ERATE=0.0005;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 17330055 . AAAAC A 238 PASS INDEL;BAVGPOST=0.994;BRSQ=0.686;LDAF=0.0101;AVGPOST=0.9902;RSQ=0.5869;ERATE=0.0031;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 17330367 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.766;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.4987;ERATE=0.0008;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17330392 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0020;AVGPOST=0.9976;RSQ=0.4859;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17330453 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.6093;AVGPOST=0.9962;RSQ=0.9936;ERATE=0.0005;THETA=0.0008;AC=1335;AN=2184 GT:DS:GL:BD 0.61126375 1
1 17330470 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7919;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17330539 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.9048;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17330553 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6466;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17330642 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17331155 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17331211 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0040;AVGPOST=0.9997;RSQ=0.9735;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 17331229 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17331270 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17331407 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0023;AVGPOST=0.9992;RSQ=0.8632;ERATE=0.0011;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17331413 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17331436 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0343;AVGPOST=0.9998;RSQ=0.9974;ERATE=0.0003;THETA=0.0005;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 17331478 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0082;AVGPOST=0.9998;RSQ=0.9906;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 17331517 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17331520 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7676;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17331590 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17331598 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 17331627 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8890;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17331672 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17331676 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5747;AVGPOST=0.9989;RSQ=0.9980;ERATE=0.0003;THETA=0.0003;AC=1257;AN=2184 GT:DS:GL:BD 0.57554942 1
1 17331718 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17331817 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.9040;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17331962 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 17332000 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17332012 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9634;ERATE=0.0003;THETA=0.0032;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 17332025 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17332056 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9799;ERATE=0.0006;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 17332065 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9524;ERATE=0.0005;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17332081 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17332089 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17332096 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 17332155 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 17332302 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0124;AVGPOST=1.0000;RSQ=0.9982;ERATE=0.0003;THETA=0.0002;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 17332500 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.853;LDAF=0.0080;AVGPOST=0.9968;RSQ=0.8315;ERATE=0.0007;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 17332501 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.664;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8686;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17332626 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.643;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4253;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17332677 . CAG C 758 PASS INDEL;BAVGPOST=0.996;BRSQ=0.798;LDAF=0.0108;AVGPOST=0.9947;RSQ=0.7763;ERATE=0.0012;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 17332743 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.948;LDAF=0.0372;AVGPOST=0.9979;RSQ=0.9728;ERATE=0.0004;THETA=0.0012;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 17332744 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.948;LDAF=0.0356;AVGPOST=0.9990;RSQ=0.9857;ERATE=0.0004;THETA=0.0014;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 17332811 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5161;ERATE=0.0005;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17332848 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0032;AVGPOST=0.9952;RSQ=0.3789;ERATE=0.0006;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17333024 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17333049 . AGTGT A 1206 PASS INDEL;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0049;AVGPOST=0.9963;RSQ=0.7086;ERATE=0.0008;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 17333173 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9170;ERATE=0.0005;THETA=0.0013;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 17333219 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9351;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17333312 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.743;LDAF=0.0064;AVGPOST=0.9942;RSQ=0.6368;ERATE=0.0008;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 17333425 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7148;ERATE=0.0004;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17333438 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0023;AVGPOST=0.9985;RSQ=0.7647;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17333463 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0014;AVGPOST=0.9979;RSQ=0.3093;ERATE=0.0006;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17333510 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.713;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.4880;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17333546 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0052;AVGPOST=0.9983;RSQ=0.8507;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 17333761 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.697;LDAF=0.0027;AVGPOST=0.9954;RSQ=0.3121;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17333871 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.317;LDAF=0.0028;AVGPOST=0.9968;RSQ=0.4835;ERATE=0.0010;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17333984 . GGCT G 404 PASS INDEL;BAVGPOST=0.998;BRSQ=0.811;LDAF=0.0085;AVGPOST=0.9916;RSQ=0.6220;ERATE=0.0009;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 17334139 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.435;LDAF=0.0098;AVGPOST=0.9841;RSQ=0.3588;ERATE=0.0017;THETA=0.0012;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 17334244 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.574;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.3540;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17334533 . T TTTCA 232 PASS INDEL;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0075;AVGPOST=0.9931;RSQ=0.6272;ERATE=0.0012;THETA=0.0036;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 17334564 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0017;AVGPOST=0.9979;RSQ=0.5567;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17334574 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5900;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17334640 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0004;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17334719 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0343;AVGPOST=0.9986;RSQ=0.9818;ERATE=0.0004;THETA=0.0006;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 17334790 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.854;LDAF=0.0069;AVGPOST=0.9971;RSQ=0.8466;ERATE=0.0004;THETA=0.0051;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 17334905 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17334914 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.868;LDAF=0.0169;AVGPOST=0.9955;RSQ=0.8937;ERATE=0.0004;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 17334929 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7691;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17334983 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9187;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 17334983 . T TG 90 PASS INDEL;BAVGPOST=0.997;BRSQ=0.596;LDAF=0.0079;AVGPOST=0.9909;RSQ=0.5460;ERATE=0.0022;THETA=0.0018;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 17335331 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.703;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4876;ERATE=0.0005;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17335788 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6318;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17336116 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0016;AVGPOST=0.9988;RSQ=0.6919;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17336198 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0111;AVGPOST=0.9972;RSQ=0.8958;ERATE=0.0004;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 17336225 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.568;LDAF=0.0080;AVGPOST=0.9905;RSQ=0.5380;ERATE=0.0045;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 17336253 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.3064;AVGPOST=0.9951;RSQ=0.9907;ERATE=0.0006;THETA=0.0003;AC=669;AN=2184 GT:DS:GL:BD 0.30631867 0
1 17336319 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.2103;AVGPOST=0.9960;RSQ=0.9905;ERATE=0.0005;THETA=0.0003;AC=460;AN=2184 GT:DS:GL:BD 0.21062271 0
1 17336521 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.3581;AVGPOST=0.9888;RSQ=0.9814;ERATE=0.0011;THETA=0.0004;AC=776;AN=2184 GT:DS:GL:BD 0.35531136 0
1 17336543 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0029;AVGPOST=0.9969;RSQ=0.5866;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17336545 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1795;AVGPOST=0.9946;RSQ=0.9846;ERATE=0.0006;THETA=0.0014;AC=391;AN=2184 GT:DS:GL:BD 0.17902930 0
1 17336584 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0035;AVGPOST=0.9939;RSQ=0.3597;ERATE=0.0006;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17336591 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.550;LDAF=0.0037;AVGPOST=0.9960;RSQ=0.5379;ERATE=0.0007;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17336595 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.980;LDAF=0.3113;AVGPOST=0.9861;RSQ=0.9741;ERATE=0.0013;THETA=0.0006;AC=676;AN=2184 GT:DS:GL:BD 0.30952382 0
1 17336808 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.636;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5084;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17336857 . GCCA G 30 PASS INDEL;BAVGPOST=0.999;BRSQ=0.695;LDAF=0.0029;AVGPOST=0.9960;RSQ=0.4475;ERATE=0.0008;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17336927 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0024;AVGPOST=0.9993;RSQ=0.8560;ERATE=0.0004;THETA=0.0015;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17337165 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17337346 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.618;LDAF=0.0051;AVGPOST=0.9967;RSQ=0.7151;ERATE=0.0005;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 17337391 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.3860;AVGPOST=0.9934;RSQ=0.9887;ERATE=0.0005;THETA=0.0007;AC=845;AN=2184 GT:DS:GL:BD 0.38690478 0
1 17337414 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5093;ERATE=0.0003;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17337483 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7079;ERATE=0.0004;THETA=0.0029;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17337511 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5697;ERATE=0.0004;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17337591 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9662;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17337610 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.778;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7595;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17337711 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7664;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17337789 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7425;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17337826 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6453;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17337948 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0083;AVGPOST=0.9964;RSQ=0.8087;ERATE=0.0007;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 17338107 . C CT 269 PASS INDEL;BAVGPOST=0.993;BRSQ=0.504;LDAF=0.0100;AVGPOST=0.9944;RSQ=0.7773;ERATE=0.0007;THETA=0.0020;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 17338403 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.117;LDAF=0.0357;AVGPOST=0.9356;RSQ=0.2149;ERATE=0.0040;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 17338460 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.946;LDAF=0.3955;AVGPOST=0.9275;RSQ=0.8811;ERATE=0.0052;THETA=0.0003;AC=837;AN=2184 GT:DS:GL:BD 0.38324177 0
1 17338581 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.555;LDAF=0.0041;AVGPOST=0.9927;RSQ=0.2573;ERATE=0.0012;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17338627 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.756;LDAF=0.0027;AVGPOST=0.9976;RSQ=0.6091;ERATE=0.0004;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17338646 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6136;ERATE=0.0005;THETA=0.0071;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17338917 . A AAG 292 PASS INDEL;BAVGPOST=0.996;BRSQ=0.416;LDAF=0.0083;AVGPOST=0.9878;RSQ=0.4009;ERATE=0.0015;THETA=0.0011;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 17339064 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5888;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17339171 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0048;AVGPOST=0.9986;RSQ=0.8942;ERATE=0.0003;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 17339225 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8497;ERATE=0.0004;THETA=0.0081;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17339312 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0054;AVGPOST=0.9993;RSQ=0.9409;ERATE=0.0004;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 17339325 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6933;ERATE=0.0004;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17339374 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17339435 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17339507 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.763;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8298;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17339521 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17339812 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0036;AVGPOST=0.9980;RSQ=0.7722;ERATE=0.0006;THETA=0.0013;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 17339845 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0032;AVGPOST=0.9973;RSQ=0.6492;ERATE=0.0012;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17339939 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.989;LDAF=0.4393;AVGPOST=0.9795;RSQ=0.9677;ERATE=0.0047;THETA=0.0006;AC=959;AN=2184 GT:DS:GL:BD 0.43910256 0
1 17339943 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.790;LDAF=0.0029;AVGPOST=0.9976;RSQ=0.6878;ERATE=0.0004;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17340024 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6699;ERATE=0.0007;THETA=0.0039;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17340294 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.418;LDAF=0.0019;AVGPOST=0.9976;RSQ=0.4646;ERATE=0.0005;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17340294 . A AAATG 944 PASS INDEL;BAVGPOST=0.973;BRSQ=0.616;LDAF=0.0519;AVGPOST=0.9457;RSQ=0.5454;ERATE=0.0107;THETA=0.0079;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 17340389 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7841;ERATE=0.0003;THETA=0.0031;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17340538 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.763;LDAF=0.0024;AVGPOST=0.9971;RSQ=0.5762;ERATE=0.0008;THETA=0.0039;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17340601 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0047;AVGPOST=0.9976;RSQ=0.7900;ERATE=0.0006;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 17340878 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.1020;AVGPOST=0.9988;RSQ=0.9941;ERATE=0.0004;THETA=0.0005;AC=223;AN=2184 GT:DS:GL:BD 0.10210623 0
1 17340908 . G GT 41 PASS INDEL;BAVGPOST=0.994;BRSQ=0.594;LDAF=0.0152;AVGPOST=0.9776;RSQ=0.4064;ERATE=0.0038;THETA=0.0011;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 17340992 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.718;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4092;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17341084 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2310;AVGPOST=0.9973;RSQ=0.9940;ERATE=0.0006;THETA=0.0005;AC=505;AN=2184 GT:DS:GL:BD 0.23122710 0
1 17341146 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3637;AVGPOST=0.9957;RSQ=0.9928;ERATE=0.0005;THETA=0.0005;AC=792;AN=2184 GT:DS:GL:BD 0.36263737 0
1 17341232 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.703;LDAF=0.0013;AVGPOST=0.9980;RSQ=0.4434;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17341305 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.818;LDAF=0.0047;AVGPOST=0.9979;RSQ=0.8349;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 17341313 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0044;AVGPOST=0.9984;RSQ=0.8859;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 17341336 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.854;LDAF=0.0037;AVGPOST=0.9995;RSQ=0.9383;ERATE=0.0005;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 17341345 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17341371 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4808;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17341375 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0036;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17341477 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0079;AVGPOST=0.9981;RSQ=0.9098;ERATE=0.0004;THETA=0.0008;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 17341509 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0148;AVGPOST=0.9978;RSQ=0.9493;ERATE=0.0004;THETA=0.0008;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 17341570 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9225;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17341579 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5980;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17341713 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17341752 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4699;AVGPOST=0.9964;RSQ=0.9937;ERATE=0.0012;THETA=0.0004;AC=1025;AN=2184 GT:DS:GL:BD 0.46932235 0
1 17341773 . T TG 45 PASS INDEL;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17341808 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9323;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 17341842 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.733;LDAF=0.0039;AVGPOST=0.9984;RSQ=0.8376;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 17341864 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4401;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17341937 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17342000 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7335;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17342038 rs66465176 GTAAAT G 64685 PASS INDEL;BAVGPOST=0.990;BRSQ=0.982;LDAF=0.3632;AVGPOST=0.9948;RSQ=0.9911;ERATE=0.0015;THETA=0.0038;AC=793;AN=2184 GT:DS:GL:BD 0.36309522 0
1 17342248 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17342260 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4755;AVGPOST=0.9974;RSQ=0.9966;ERATE=0.0006;THETA=0.0004;AC=1036;AN=2184 GT:DS:GL:BD 0.47435898 0
1 17342368 rs80208119 G GT 69639 PASS INDEL;BAVGPOST=0.993;BRSQ=0.988;LDAF=0.5948;AVGPOST=0.9903;RSQ=0.9847;ERATE=0.0024;THETA=0.0004;AC=1301;AN=2184 GT:DS:GL:BD 0.59569597 1
1 17342437 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0106;AVGPOST=0.9991;RSQ=0.9650;ERATE=0.0003;THETA=0.0012;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 17342530 . CTTTCCCTACAGATCTGGAG C 9171 PASS INDEL;BAVGPOST=0.987;BRSQ=0.790;LDAF=0.0331;AVGPOST=0.9914;RSQ=0.9062;ERATE=0.0004;THETA=0.0002;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 17342541 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17342659 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3678;AVGPOST=0.9974;RSQ=0.9955;ERATE=0.0009;THETA=0.0003;AC=800;AN=2184 GT:DS:GL:BD 0.36630037 0
1 17342725 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5513;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17342726 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5926;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17342735 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.5981;AVGPOST=0.9972;RSQ=0.9960;ERATE=0.0005;THETA=0.0005;AC=1307;AN=2184 GT:DS:GL:BD 0.59844321 1
1 17342783 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4802;AVGPOST=0.9981;RSQ=0.9969;ERATE=0.0006;THETA=0.0008;AC=1051;AN=2184 GT:DS:GL:BD 0.48122710 0
1 17342794 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6813;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17342825 . TC T 1267 PASS INDEL;BAVGPOST=0.895;BRSQ=0.646;LDAF=0.1828;AVGPOST=0.8010;RSQ=0.4833;ERATE=0.0270;THETA=0.0004;AC=250;AN=2184 GT:DS:GL:BD 0.11446887 0
1 17342827 rs34632340 CT C 24326 PASS INDEL;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.2265;AVGPOST=0.9964;RSQ=0.9926;ERATE=0.0011;THETA=0.0004;AC=493;AN=2184 GT:DS:GL:BD 0.22573259 0
1 17342882 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.733;LDAF=0.0023;AVGPOST=0.9979;RSQ=0.6352;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17342924 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.4994;AVGPOST=0.9986;RSQ=0.9979;ERATE=0.0005;THETA=0.0004;AC=1088;AN=2184 GT:DS:GL:BD 0.49816850 0
1 17343038 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0030;AVGPOST=0.9967;RSQ=0.5828;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17343108 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0035;AVGPOST=0.9996;RSQ=0.9640;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 17343114 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17343126 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0045;AVGPOST=0.9983;RSQ=0.8322;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 17343152 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.6788;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17343198 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.1332;AVGPOST=0.9988;RSQ=0.9965;ERATE=0.0004;THETA=0.0004;AC=292;AN=2184 GT:DS:GL:BD 0.13369964 0
1 17343243 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.740;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.4254;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17343358 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.538;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4249;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17343460 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0042;AVGPOST=0.9968;RSQ=0.6713;ERATE=0.0005;THETA=0.0021;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 17343611 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.743;LDAF=0.0013;AVGPOST=0.9981;RSQ=0.3635;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17343670 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5799;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17343702 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.438;LDAF=0.0121;AVGPOST=0.9799;RSQ=0.3049;ERATE=0.0018;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 17343755 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.504;LDAF=0.0030;AVGPOST=0.9947;RSQ=0.2215;ERATE=0.0009;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17343826 . G GT 167 PASS INDEL;BAVGPOST=0.948;BRSQ=0.421;LDAF=0.0881;AVGPOST=0.8723;RSQ=0.3439;ERATE=0.0185;THETA=0.0002;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 17343844 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.951;LDAF=0.1112;AVGPOST=0.9796;RSQ=0.9221;ERATE=0.0033;THETA=0.0027;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 17343845 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.965;LDAF=0.1348;AVGPOST=0.9735;RSQ=0.9228;ERATE=0.0034;THETA=0.0006;AC=285;AN=2184 GT:DS:GL:BD 0.13049451 0
1 17343904 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.3723;AVGPOST=0.9958;RSQ=0.9930;ERATE=0.0006;THETA=0.0024;AC=811;AN=2184 GT:DS:GL:BD 0.37133700 0
1 17343922 . TAAG T 81 PASS INDEL;BAVGPOST=0.999;BRSQ=0.731;LDAF=0.0064;AVGPOST=0.9913;RSQ=0.4439;ERATE=0.0006;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 17343966 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8303;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17344040 . T TG 48 PASS INDEL;BAVGPOST=0.998;BRSQ=0.585;LDAF=0.0054;AVGPOST=0.9935;RSQ=0.5322;ERATE=0.0005;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 17344076 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1295;AVGPOST=0.9952;RSQ=0.9855;ERATE=0.0007;THETA=0.0003;AC=282;AN=2184 GT:DS:GL:BD 0.12912089 0
1 17344094 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0046;AVGPOST=0.9973;RSQ=0.7437;ERATE=0.0007;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 17344114 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4294;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17344148 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1261;AVGPOST=0.9988;RSQ=0.9960;ERATE=0.0004;THETA=0.0006;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 17344285 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9503;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 17344383 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17344421 . G GCGGTGT 1032 PASS INDEL;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9524;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 17344510 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.979;LDAF=0.0490;AVGPOST=0.9958;RSQ=0.9634;ERATE=0.0007;THETA=0.0002;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 17344515 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.810;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6249;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17344566 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.546;LDAF=0.0283;AVGPOST=0.9633;RSQ=0.4790;ERATE=0.0080;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 17344612 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.725;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.5907;ERATE=0.0009;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17344744 . GAACT G 2376 PASS INDEL;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0121;AVGPOST=0.9979;RSQ=0.9264;ERATE=0.0005;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 17344768 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0036;AVGPOST=0.9985;RSQ=0.8375;ERATE=0.0004;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 17344843 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.830;LDAF=0.0080;AVGPOST=0.9960;RSQ=0.7903;ERATE=0.0019;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 17344883 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9882;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 17344890 . GAACACT G 131 PASS INDEL;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9460;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17344940 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.634;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.9210;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17344971 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17345073 rs35394060 G GC 67241 PASS INDEL;BAVGPOST=0.975;BRSQ=0.956;LDAF=0.6048;AVGPOST=0.9915;RSQ=0.9868;ERATE=0.0004;THETA=0.0004;AC=1321;AN=2184 GT:DS:GL:BD 0.60485345 1
1 17345074 rs35258340 C CG 30391 PASS INDEL;BAVGPOST=0.969;BRSQ=0.945;LDAF=0.5927;AVGPOST=0.9591;RSQ=0.9378;ERATE=0.0086;THETA=0.0011;AC=1302;AN=2184 GT:DS:GL:BD 0.59615386 1
1 17345113 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1026;AVGPOST=0.9994;RSQ=0.9971;ERATE=0.0004;THETA=0.0003;AC=224;AN=2184 GT:DS:GL:BD 0.10256410 0
1 17345195 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7587;ERATE=0.0008;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17345216 . C CT 329 PASS INDEL;BAVGPOST=0.970;BRSQ=0.580;LDAF=0.0623;AVGPOST=0.9262;RSQ=0.4784;ERATE=0.0234;THETA=0.0003;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 17345247 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17345493 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0036;AVGPOST=1.0000;RSQ=0.9940;ERATE=0.0004;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 17345580 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17345650 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0004;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17345733 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.5416;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17345854 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17345877 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2828;AVGPOST=0.9964;RSQ=0.9933;ERATE=0.0004;THETA=0.0006;AC=617;AN=2184 GT:DS:GL:BD 0.28250915 0
1 17345905 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3720;AVGPOST=0.9966;RSQ=0.9948;ERATE=0.0004;THETA=0.0008;AC=809;AN=2184 GT:DS:GL:BD 0.37042123 0
1 17346173 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.735;LDAF=0.0029;AVGPOST=0.9974;RSQ=0.6256;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17346199 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.871;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6962;ERATE=0.0004;THETA=0.0018;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17346303 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.659;LDAF=0.0021;AVGPOST=0.9970;RSQ=0.4147;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17346312 . TG T 77 PASS INDEL;BAVGPOST=0.999;BRSQ=0.620;LDAF=0.0025;AVGPOST=0.9959;RSQ=0.3851;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17346333 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.733;LDAF=0.0020;AVGPOST=0.9977;RSQ=0.5322;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17346361 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4876;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17346404 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.939;LDAF=0.9764;AVGPOST=0.9957;RSQ=0.9174;ERATE=0.0009;THETA=0.0026;AC=2137;AN=2184 GT:DS:GL:BD 0.97847986 1
1 17346433 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.1056;AVGPOST=0.9984;RSQ=0.9924;ERATE=0.0006;THETA=0.0006;AC=230;AN=2184 GT:DS:GL:BD 0.10531136 0
1 17346468 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9503;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 17346529 . AG A 70 PASS INDEL;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4389;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17346620 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0031;AVGPOST=0.9990;RSQ=0.8483;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 17346774 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17346823 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0038;AVGPOST=0.9993;RSQ=0.9188;ERATE=0.0005;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 17347103 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7701;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17347158 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0043;AVGPOST=0.9987;RSQ=0.8600;ERATE=0.0009;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 17347513 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9609;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 17347528 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.980;LDAF=0.1007;AVGPOST=0.9955;RSQ=0.9835;ERATE=0.0006;THETA=0.0035;AC=220;AN=2184 GT:DS:GL:BD 0.10073260 0
1 17347598 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5291;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17347854 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.792;LDAF=0.0123;AVGPOST=0.9963;RSQ=0.8794;ERATE=0.0004;THETA=0.0007;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 17347932 . GT G 271 PASS INDEL;BAVGPOST=1.000;BRSQ=0.695;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5031;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17347956 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.9528;AVGPOST=0.9941;RSQ=0.9491;ERATE=0.0007;THETA=0.0005;AC=2087;AN=2184 GT:DS:GL:BD 0.95558608 1
1 17348137 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0023;AVGPOST=0.9984;RSQ=0.6819;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17348184 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0036;AVGPOST=0.9991;RSQ=0.8974;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 17348215 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0017;AVGPOST=0.9976;RSQ=0.4179;ERATE=0.0005;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17348260 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0036;AVGPOST=0.9981;RSQ=0.7862;ERATE=0.0004;THETA=0.0024;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 17348279 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6388;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17348444 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9233;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17348470 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0034;AVGPOST=0.9991;RSQ=0.9024;ERATE=0.0004;THETA=0.0055;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 17348513 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0024;AVGPOST=0.9971;RSQ=0.5305;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17348531 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0122;AVGPOST=0.9993;RSQ=0.9760;ERATE=0.0004;THETA=0.0007;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 17348544 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.2269;AVGPOST=0.9982;RSQ=0.9962;ERATE=0.0004;THETA=0.0003;AC=496;AN=2184 GT:DS:GL:BD 0.22710623 0
1 17348611 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6318;ERATE=0.0004;THETA=0.0048;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17348652 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5911;ERATE=0.0004;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17348684 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9603;ERATE=0.0004;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 17348687 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1196;AVGPOST=0.9979;RSQ=0.9937;ERATE=0.0004;THETA=0.0010;AC=262;AN=2184 GT:DS:GL:BD 0.11996337 0
1 17348692 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17348788 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17348847 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1016;AVGPOST=0.9990;RSQ=0.9961;ERATE=0.0004;THETA=0.0006;AC=222;AN=2184 GT:DS:GL:BD 0.10164835 0
1 17349074 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0005;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17349090 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17349159 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17349180 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17349275 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17349367 . C CCA 1159 PASS INDEL;BAVGPOST=0.997;BRSQ=0.794;LDAF=0.0077;AVGPOST=0.9946;RSQ=0.6885;ERATE=0.0013;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 17349429 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.9066;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17349573 . TC T 319 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.5722;ERATE=0.0011;THETA=0.0042;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17349686 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6776;ERATE=0.0004;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17349713 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0022;AVGPOST=0.9991;RSQ=0.8117;ERATE=0.0006;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17349719 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.917;LDAF=0.0224;AVGPOST=0.9922;RSQ=0.8729;ERATE=0.0060;THETA=0.0002;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 17349798 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.962;BRSQ=0.899;LDAF=0.7787;AVGPOST=0.9465;RSQ=0.8890;ERATE=0.0676;THETA=0.0005;AC=1716;AN=2184 GT:DS:GL:BD 0.78571427 1
1 17349819 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.944;LDAF=0.0266;AVGPOST=0.9927;RSQ=0.8954;ERATE=0.0087;THETA=0.0007;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 17349830 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.942;LDAF=0.0866;AVGPOST=0.9824;RSQ=0.9241;ERATE=0.0176;THETA=0.0079;AC=181;AN=2184 GT:DS:GL:BD 0.08287546 0
1 17349955 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.969;LDAF=0.2595;AVGPOST=0.9802;RSQ=0.9626;ERATE=0.0099;THETA=0.0033;AC=564;AN=2184 GT:DS:GL:BD 0.25824177 0
1 17349965 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7477;ERATE=0.0003;THETA=0.0066;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17350074 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17350143 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.5708;AVGPOST=0.9847;RSQ=0.9780;ERATE=0.0067;THETA=0.0008;AC=1249;AN=2184 GT:DS:GL:BD 0.57188642 1
1 17350201 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0073;AVGPOST=0.9997;RSQ=0.9798;ERATE=0.0004;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 17350238 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.9815;AVGPOST=0.9995;RSQ=0.9871;ERATE=0.0004;THETA=0.0003;AC=2144;AN=2184 GT:DS:GL:BD 0.98168498 1
1 17350243 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2361;AVGPOST=0.9981;RSQ=0.9966;ERATE=0.0004;THETA=0.0007;AC=517;AN=2184 GT:DS:GL:BD 0.23672161 0
1 17350421 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17350442 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 17350451 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17350558 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17350743 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17350880 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6536;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17350908 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6061;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17350931 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3848;AVGPOST=0.9957;RSQ=0.9934;ERATE=0.0007;THETA=0.0003;AC=837;AN=2184 GT:DS:GL:BD 0.38324177 0
1 17350943 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.8521;AVGPOST=0.9973;RSQ=0.9919;ERATE=0.0004;THETA=0.0012;AC=1861;AN=2184 GT:DS:GL:BD 0.85210621 1
1 17351060 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0412;AVGPOST=0.9993;RSQ=0.9925;ERATE=0.0003;THETA=0.0002;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 17351096 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.997;LDAF=0.3367;AVGPOST=0.9966;RSQ=0.9950;ERATE=0.0004;THETA=0.0005;AC=737;AN=2184 GT:DS:GL:BD 0.33745420 0
1 17351359 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0048;AVGPOST=0.9996;RSQ=0.9631;ERATE=0.0004;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 17351390 . CT C 33 PASS INDEL;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6612;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17351426 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0004;THETA=0.0053;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17351620 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.0904;AVGPOST=0.9986;RSQ=0.9931;ERATE=0.0005;THETA=0.0005;AC=197;AN=2184 GT:DS:GL:BD 0.09020147 0
1 17351838 . TAAAC T 146 PASS INDEL;BAVGPOST=1.000;BRSQ=0.688;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4468;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17351892 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.8715;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 17351999 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0077;AVGPOST=0.9968;RSQ=0.8501;ERATE=0.0005;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 17352055 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.982;LDAF=0.1256;AVGPOST=0.9970;RSQ=0.9898;ERATE=0.0005;THETA=0.0004;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 17352186 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.809;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.8974;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17352208 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0023;AVGPOST=0.9971;RSQ=0.4800;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17352299 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6828;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17352318 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5570;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17352400 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0413;AVGPOST=0.9989;RSQ=0.9879;ERATE=0.0004;THETA=0.0003;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 17352533 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17352583 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0021;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17352686 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0031;AVGPOST=0.9990;RSQ=0.8607;ERATE=0.0004;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 17352748 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7217;ERATE=0.0004;THETA=0.0022;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17352870 rs112354375 TTTTC T 14580 PASS INDEL;BAVGPOST=0.983;BRSQ=0.936;LDAF=0.1235;AVGPOST=0.9948;RSQ=0.9829;ERATE=0.0013;THETA=0.0004;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 17352892 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9401;ERATE=0.0005;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 17353001 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0108;AVGPOST=0.9980;RSQ=0.9205;ERATE=0.0004;THETA=0.0009;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 17353054 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9607;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 17353276 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9366;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17353426 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0062;AVGPOST=0.9969;RSQ=0.8267;ERATE=0.0004;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 17353490 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9535;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17353564 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.782;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5244;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17353664 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17353988 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3814;AVGPOST=0.9987;RSQ=0.9978;ERATE=0.0004;THETA=0.0006;AC=830;AN=2184 GT:DS:GL:BD 0.38003662 0
1 17354026 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0398;AVGPOST=0.9992;RSQ=0.9923;ERATE=0.0003;THETA=0.0003;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 17354041 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7566;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17354254 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 17354297 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9947;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 17354530 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8143;ERATE=0.0009;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17354677 . CAT C 24 PASS INDEL;BAVGPOST=0.999;BRSQ=0.809;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7186;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17354835 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0058;AVGPOST=0.9983;RSQ=0.8808;ERATE=0.0004;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 17354842 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.721;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7608;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17355012 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17355030 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0016;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 17355075 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17355265 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17355336 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9667;ERATE=0.0007;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17355353 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0008;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17355387 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.9575;AVGPOST=1.0000;RSQ=0.9995;ERATE=0.0003;THETA=0.0003;AC=2091;AN=2184 GT:DS:GL:BD 0.95741761 1
1 17355420 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17355516 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17355533 . GT G 140 PASS INDEL;BAVGPOST=1.000;BRSQ=0.748;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4957;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17355639 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.782;LDAF=0.0016;AVGPOST=0.9975;RSQ=0.4189;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17355691 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.828;LDAF=0.0033;AVGPOST=0.9995;RSQ=0.9295;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 17355783 . TG T 433 PASS INDEL;BAVGPOST=0.999;BRSQ=0.896;LDAF=0.0055;AVGPOST=0.9984;RSQ=0.8880;ERATE=0.0003;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 17355862 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.706;LDAF=0.0008;AVGPOST=0.9989;RSQ=0.3787;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17355876 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4867;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17355896 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.906;LDAF=0.0309;AVGPOST=0.9943;RSQ=0.9229;ERATE=0.0006;THETA=0.0005;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 17355985 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.863;LDAF=0.0048;AVGPOST=0.9983;RSQ=0.8590;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 17356218 . CTCT C 155 PASS INDEL;BAVGPOST=0.998;BRSQ=0.807;LDAF=0.0055;AVGPOST=0.9942;RSQ=0.6128;ERATE=0.0005;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 17356226 . C CT 25 PASS INDEL;BAVGPOST=0.988;BRSQ=0.462;LDAF=0.0237;AVGPOST=0.9646;RSQ=0.3828;ERATE=0.0096;THETA=0.0016;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 17356348 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.707;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.3693;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17356590 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0100;AVGPOST=0.9990;RSQ=0.9525;ERATE=0.0005;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 17356640 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.760;LDAF=0.0021;AVGPOST=0.9982;RSQ=0.6096;ERATE=0.0007;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17356683 . C CA 16 PASS INDEL;BAVGPOST=0.997;BRSQ=0.513;LDAF=0.0091;AVGPOST=0.9874;RSQ=0.4204;ERATE=0.0040;THETA=0.0012;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 17356849 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0028;AVGPOST=0.9997;RSQ=0.9538;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 17356985 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8940;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17356996 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0400;AVGPOST=0.9992;RSQ=0.9912;ERATE=0.0003;THETA=0.0006;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 17357091 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.8974;ERATE=0.0004;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17357119 . G GT 40 PASS INDEL;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.5507;ERATE=0.0007;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17357132 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6494;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17357271 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1021;AVGPOST=0.9961;RSQ=0.9824;ERATE=0.0008;THETA=0.0007;AC=220;AN=2184 GT:DS:GL:BD 0.10073260 0
1 17357366 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.3711;AVGPOST=0.9945;RSQ=0.9904;ERATE=0.0008;THETA=0.0006;AC=807;AN=2184 GT:DS:GL:BD 0.36950549 0
1 17357392 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0028;AVGPOST=0.9981;RSQ=0.7329;ERATE=0.0005;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 17357467 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.834;BRSQ=0.484;LDAF=0.7577;AVGPOST=0.7834;RSQ=0.4687;ERATE=0.0741;THETA=0.0013;AC=1781;AN=2184 GT:DS:GL:BD 0.81547618 1
1 17357577 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1248;AVGPOST=0.9983;RSQ=0.9941;ERATE=0.0005;THETA=0.0002;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 17357615 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1009;AVGPOST=0.9990;RSQ=0.9956;ERATE=0.0004;THETA=0.0003;AC=220;AN=2184 GT:DS:GL:BD 0.10073260 0
1 17357841 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.5024;ERATE=0.0004;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17357958 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.9574;AVGPOST=0.9997;RSQ=0.9970;ERATE=0.0004;THETA=0.0003;AC=2091;AN=2184 GT:DS:GL:BD 0.95741761 1
1 17357994 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.7669;ERATE=0.0007;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17358114 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0064;AVGPOST=0.9960;RSQ=0.7328;ERATE=0.0004;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 17358337 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17358404 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0030;AVGPOST=0.9973;RSQ=0.6910;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 17358602 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5114;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17358639 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0027;AVGPOST=0.9974;RSQ=0.6215;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17358838 rs35846145 ACG A 19349 PASS INDEL;BAVGPOST=0.995;BRSQ=0.988;LDAF=0.2247;AVGPOST=0.9927;RSQ=0.9859;ERATE=0.0009;THETA=0.0006;AC=493;AN=2184 GT:DS:GL:BD 0.22573259 0
1 17358851 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.780;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4978;ERATE=0.0004;THETA=0.0046;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17359061 . T TG 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.681;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4585;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17359293 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6651;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17359386 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3717;AVGPOST=0.9994;RSQ=0.9992;ERATE=0.0004;THETA=0.0003;AC=809;AN=2184 GT:DS:GL:BD 0.37042123 0
1 17359573 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17359577 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17359676 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9575;AVGPOST=1.0000;RSQ=0.9995;ERATE=0.0003;THETA=0.0006;AC=2091;AN=2184 GT:DS:GL:BD 0.95741761 1
1 17360139 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1258;AVGPOST=0.9975;RSQ=0.9923;ERATE=0.0009;THETA=0.0003;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 17360283 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7163;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17360385 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17360613 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6250;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17360614 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.6038;AVGPOST=0.9969;RSQ=0.9951;ERATE=0.0005;THETA=0.0004;AC=1316;AN=2184 GT:DS:GL:BD 0.60256410 1
1 17360620 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1025;AVGPOST=0.9982;RSQ=0.9924;ERATE=0.0004;THETA=0.0008;AC=225;AN=2184 GT:DS:GL:BD 0.10302198 0
1 17360642 rs72506948 A AT 34458 PASS INDEL;BAVGPOST=0.993;BRSQ=0.989;LDAF=0.3705;AVGPOST=0.9931;RSQ=0.9888;ERATE=0.0010;THETA=0.0016;AC=806;AN=2184 GT:DS:GL:BD 0.36904761 0
1 17360651 rs66475449 C CT 110 PASS INDEL;BAVGPOST=0.986;BRSQ=0.584;LDAF=0.0275;AVGPOST=0.9665;RSQ=0.4878;ERATE=0.0106;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 17360827 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.862;LDAF=0.0057;AVGPOST=0.9968;RSQ=0.7544;ERATE=0.0014;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 17360835 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9302;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17360968 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.595;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4689;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17361001 MERGED_DEL_2_2030 GAGTAGCTGGGATTACAGGTGCATGCCACCACACCCGGCAAATTTTTGTATTTTTAGTAGAGATAGGTTTTCCCATGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAAGTGATCCACCTGCCTCAGCCTTCCCAAATGCTGGGATTACAGGTGTGAGCGACTGCGTCTGGCCCATTATCTGTATTTGT G . . SV;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0049;AVGPOST=0.9956;RSQ=0.6217;ERATE=0.0015;THETA=0.0009;CIEND=-64,89;CIPOS=-79,78;END=17363337;HOMLEN=3;HOMSEQ=AGT;SOURCE=BreakDancer_17361014_17363346,E GT:DS:GL:BD 0.00320513 0
1 17361167 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.890;LDAF=0.0031;AVGPOST=0.9987;RSQ=0.8342;ERATE=0.0006;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 17361233 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7215;ERATE=0.0004;THETA=0.0023;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17361448 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.8468;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17361556 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6495;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17361650 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17361775 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0023;AVGPOST=0.9982;RSQ=0.7299;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17361781 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.2293;AVGPOST=0.9890;RSQ=0.9788;ERATE=0.0025;THETA=0.0007;AC=496;AN=2184 GT:DS:GL:BD 0.22710623 0
1 17361851 . A AC 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0030;AVGPOST=0.9955;RSQ=0.3244;ERATE=0.0009;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17361975 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0022;AVGPOST=0.9986;RSQ=0.7335;ERATE=0.0007;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17361992 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.844;LDAF=0.0051;AVGPOST=0.9968;RSQ=0.7465;ERATE=0.0009;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 17362049 . A AC 24 PASS INDEL;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4676;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17362071 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0041;AVGPOST=0.9978;RSQ=0.7936;ERATE=0.0004;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 17362232 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.669;LDAF=0.0025;AVGPOST=0.9958;RSQ=0.3204;ERATE=0.0007;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17362286 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0038;AVGPOST=0.9978;RSQ=0.7273;ERATE=0.0006;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 17362342 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.3522;AVGPOST=0.9931;RSQ=0.9893;ERATE=0.0009;THETA=0.0003;AC=772;AN=2184 GT:DS:GL:BD 0.35347986 0
1 17362363 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.747;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5410;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17362534 . TCA T 60 PASS INDEL;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6151;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17362556 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0033;AVGPOST=0.9991;RSQ=0.9138;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 17362601 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0085;AVGPOST=0.9989;RSQ=0.9510;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 17362607 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4823;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17362705 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3698;AVGPOST=0.9980;RSQ=0.9967;ERATE=0.0005;THETA=0.0005;AC=804;AN=2184 GT:DS:GL:BD 0.36813188 0
1 17362774 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.704;LDAF=0.0015;AVGPOST=0.9985;RSQ=0.6793;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17362859 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3725;AVGPOST=0.9949;RSQ=0.9915;ERATE=0.0010;THETA=0.0003;AC=808;AN=2184 GT:DS:GL:BD 0.36996338 0
1 17362951 . C CA 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0038;AVGPOST=0.9941;RSQ=0.4116;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17363005 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6027;AVGPOST=0.9975;RSQ=0.9958;ERATE=0.0006;THETA=0.0005;AC=1316;AN=2184 GT:DS:GL:BD 0.60256410 1
1 17363242 . TATAA T 93 PASS INDEL;BAVGPOST=0.998;BRSQ=0.654;LDAF=0.0048;AVGPOST=0.9936;RSQ=0.4078;ERATE=0.0010;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 17363353 . GC G 105 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0025;AVGPOST=0.9985;RSQ=0.7487;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17363430 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.658;LDAF=0.0023;AVGPOST=0.9963;RSQ=0.2877;ERATE=0.0007;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17363632 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.897;LDAF=0.0053;AVGPOST=0.9983;RSQ=0.8646;ERATE=0.0006;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 17363776 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.5773;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17363930 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.830;LDAF=0.0041;AVGPOST=0.9974;RSQ=0.7602;ERATE=0.0005;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 17364207 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.650;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5436;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17364242 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.6380;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17364249 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6373;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17364265 . G GT 546 PASS INDEL;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0051;AVGPOST=0.9989;RSQ=0.8974;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 17364273 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0027;AVGPOST=0.9998;RSQ=0.9690;ERATE=0.0003;THETA=0.0001;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 17364449 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5672;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17364622 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.713;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.7679;ERATE=0.0005;THETA=0.0024;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17364741 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7513;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17364866 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7136;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17364884 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9988;RSQ=0.8877;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 17364953 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.583;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17365165 . ATAAAG A 237 PASS INDEL;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5595;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17365216 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0045;AVGPOST=0.9995;RSQ=0.9531;ERATE=0.0003;THETA=0.0015;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 17365400 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4074;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17365534 . CT C 16 PASS INDEL;BAVGPOST=0.999;BRSQ=0.653;LDAF=0.0021;AVGPOST=0.9981;RSQ=0.6485;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17365733 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.979;LDAF=0.3706;AVGPOST=0.9895;RSQ=0.9828;ERATE=0.0021;THETA=0.0004;AC=807;AN=2184 GT:DS:GL:BD 0.36950549 0
1 17365800 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.2860;AVGPOST=0.9941;RSQ=0.9888;ERATE=0.0008;THETA=0.0004;AC=624;AN=2184 GT:DS:GL:BD 0.28571430 0
1 17365855 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4022;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17365926 . A AAT 381 PASS INDEL;BAVGPOST=0.998;BRSQ=0.936;LDAF=0.0158;AVGPOST=0.9944;RSQ=0.8731;ERATE=0.0005;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 17365950 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0071;AVGPOST=0.9983;RSQ=0.9021;ERATE=0.0004;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 17365954 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.747;LDAF=0.0016;AVGPOST=0.9976;RSQ=0.3994;ERATE=0.0007;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17365975 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4706;ERATE=0.0007;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17366037 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.775;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.5624;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17366073 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1039;AVGPOST=0.9992;RSQ=0.9963;ERATE=0.0004;THETA=0.0003;AC=227;AN=2184 GT:DS:GL:BD 0.10393773 0
1 17366100 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.736;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7408;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17366129 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7941;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17366213 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17366276 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0023;AVGPOST=0.9973;RSQ=0.5327;ERATE=0.0008;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17366404 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.6093;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17366488 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9424;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 17366511 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8499;ERATE=0.0005;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 17366546 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.915;LDAF=0.0083;AVGPOST=0.9981;RSQ=0.9078;ERATE=0.0004;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 17366579 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8974;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17366582 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1221;AVGPOST=0.9991;RSQ=0.9968;ERATE=0.0004;THETA=0.0003;AC=267;AN=2184 GT:DS:GL:BD 0.12225275 0
1 17366711 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9599;ERATE=0.0005;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 17366751 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0072;AVGPOST=0.9990;RSQ=0.9489;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 17366833 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9538;AVGPOST=0.9990;RSQ=0.9920;ERATE=0.0004;THETA=0.0007;AC=2084;AN=2184 GT:DS:GL:BD 0.95421243 1
1 17366871 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3516;AVGPOST=0.9972;RSQ=0.9958;ERATE=0.0005;THETA=0.0002;AC=769;AN=2184 GT:DS:GL:BD 0.35210621 0
1 17367216 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1248;AVGPOST=0.9958;RSQ=0.9873;ERATE=0.0006;THETA=0.0006;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 17367357 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.616;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.3666;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17367404 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.686;LDAF=0.0027;AVGPOST=0.9988;RSQ=0.7997;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17367444 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0069;AVGPOST=0.9943;RSQ=0.6624;ERATE=0.0010;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 17367460 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0031;AVGPOST=0.9952;RSQ=0.4759;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17367733 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8021;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17367893 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.455;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5195;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17367970 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0028;AVGPOST=0.9951;RSQ=0.2725;ERATE=0.0009;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17368011 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.720;LDAF=0.0033;AVGPOST=0.9979;RSQ=0.7539;ERATE=0.0005;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17368015 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.605;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5657;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17368052 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.3703;AVGPOST=0.9984;RSQ=0.9970;ERATE=0.0004;THETA=0.0003;AC=807;AN=2184 GT:DS:GL:BD 0.36950549 0
1 17368169 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17368203 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9113;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17368244 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3504;AVGPOST=0.9983;RSQ=0.9972;ERATE=0.0005;THETA=0.0001;AC=766;AN=2184 GT:DS:GL:BD 0.35073259 0
1 17368248 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.830;LDAF=0.0040;AVGPOST=0.9957;RSQ=0.5540;ERATE=0.0011;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17368280 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0044;AVGPOST=0.9989;RSQ=0.8918;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 17368329 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0017;AVGPOST=0.9988;RSQ=0.7071;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17368355 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0031;AVGPOST=0.9983;RSQ=0.7778;ERATE=0.0006;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17368381 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.907;LDAF=0.0337;AVGPOST=0.9892;RSQ=0.8818;ERATE=0.0005;THETA=0.0002;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 17368439 . C CA 623 PASS INDEL;BAVGPOST=0.998;BRSQ=0.853;LDAF=0.0073;AVGPOST=0.9983;RSQ=0.9072;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 17368455 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0087;AVGPOST=0.9978;RSQ=0.8892;ERATE=0.0004;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 17368470 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.754;LDAF=0.0086;AVGPOST=0.9947;RSQ=0.7372;ERATE=0.0005;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 17368471 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.754;LDAF=0.0085;AVGPOST=0.9949;RSQ=0.7441;ERATE=0.0004;THETA=0.0010;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 17368510 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6475;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17368533 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0056;AVGPOST=0.9979;RSQ=0.8472;ERATE=0.0005;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 17368623 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.978;LDAF=0.1044;AVGPOST=0.9985;RSQ=0.9931;ERATE=0.0006;THETA=0.0003;AC=228;AN=2184 GT:DS:GL:BD 0.10439561 0
1 17368690 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9824;ERATE=0.0004;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 17368763 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.8889;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 17368872 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17368922 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0038;AVGPOST=0.9982;RSQ=0.8063;ERATE=0.0014;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 17369115 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0042;AVGPOST=0.9984;RSQ=0.8493;ERATE=0.0004;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 17369158 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3521;AVGPOST=0.9942;RSQ=0.9905;ERATE=0.0014;THETA=0.0003;AC=769;AN=2184 GT:DS:GL:BD 0.35210621 0
1 17369257 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.765;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.5905;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17369315 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3712;AVGPOST=0.9984;RSQ=0.9972;ERATE=0.0005;THETA=0.0002;AC=807;AN=2184 GT:DS:GL:BD 0.36950549 0
1 17369377 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0027;AVGPOST=0.9982;RSQ=0.7175;ERATE=0.0005;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 17369423 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.697;LDAF=0.0027;AVGPOST=0.9979;RSQ=0.6662;ERATE=0.0008;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17369538 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.936;LDAF=0.1305;AVGPOST=0.9808;RSQ=0.9412;ERATE=0.0020;THETA=0.0001;AC=276;AN=2184 GT:DS:GL:BD 0.12637363 0
1 17369688 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3710;AVGPOST=0.9964;RSQ=0.9934;ERATE=0.0010;THETA=0.0003;AC=807;AN=2184 GT:DS:GL:BD 0.36950549 0
1 17369738 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3706;AVGPOST=0.9995;RSQ=0.9990;ERATE=0.0004;THETA=0.0003;AC=807;AN=2184 GT:DS:GL:BD 0.36950549 0
1 17369808 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5517;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17369952 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3710;AVGPOST=0.9988;RSQ=0.9978;ERATE=0.0005;THETA=0.0003;AC=807;AN=2184 GT:DS:GL:BD 0.36950549 0
1 17369970 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17370120 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3702;AVGPOST=0.9974;RSQ=0.9962;ERATE=0.0005;THETA=0.0004;AC=806;AN=2184 GT:DS:GL:BD 0.36904761 0
1 17370156 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0111;AVGPOST=0.9988;RSQ=0.9588;ERATE=0.0004;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 17370179 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9571;AVGPOST=0.9991;RSQ=0.9913;ERATE=0.0003;THETA=0.0006;AC=2091;AN=2184 GT:DS:GL:BD 0.95741761 1
1 17370205 . TGAA T 146 PASS INDEL;BAVGPOST=1.000;BRSQ=0.748;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.3302;ERATE=0.0007;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17370213 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3707;AVGPOST=0.9989;RSQ=0.9980;ERATE=0.0004;THETA=0.0004;AC=807;AN=2184 GT:DS:GL:BD 0.36950549 0
1 17370241 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3707;AVGPOST=0.9988;RSQ=0.9978;ERATE=0.0005;THETA=0.0003;AC=807;AN=2184 GT:DS:GL:BD 0.36950549 0
1 17370254 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6464;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17370406 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4900;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17370500 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5835;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17370518 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4658;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17370575 rs74682582 AT A 34626 PASS INDEL;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3709;AVGPOST=0.9988;RSQ=0.9977;ERATE=0.0005;THETA=0.0004;AC=807;AN=2184 GT:DS:GL:BD 0.36950549 0
1 17370696 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.7876;ERATE=0.0003;THETA=0.0015;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17370776 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.6183;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17370797 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.3707;AVGPOST=0.9992;RSQ=0.9986;ERATE=0.0004;THETA=0.0005;AC=807;AN=2184 GT:DS:GL:BD 0.36950549 0
1 17370848 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0060;AVGPOST=0.9970;RSQ=0.7804;ERATE=0.0008;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 17370970 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2861;AVGPOST=0.9978;RSQ=0.9955;ERATE=0.0004;THETA=0.0003;AC=625;AN=2184 GT:DS:GL:BD 0.28617215 0
1 17371152 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4959;AVGPOST=1.0000;RSQ=0.9999;ERATE=0.0003;THETA=0.0003;AC=1081;AN=2184 GT:DS:GL:BD 0.49496338 0
1 17371221 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0160;AVGPOST=1.0000;RSQ=0.9986;ERATE=0.0004;THETA=0.0011;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 17371223 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1042;AVGPOST=1.0000;RSQ=0.9998;ERATE=0.0003;THETA=0.0006;AC=228;AN=2184 GT:DS:GL:BD 0.10439561 0
1 17371286 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9756;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17371411 . GA G 23 PASS INDEL;BAVGPOST=0.997;BRSQ=0.422;LDAF=0.0030;AVGPOST=0.9964;RSQ=0.4825;ERATE=0.0009;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17371420 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9524;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17371448 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=1.0000;RSQ=0.9941;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 17371494 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3707;AVGPOST=0.9998;RSQ=0.9996;ERATE=0.0003;THETA=0.0003;AC=807;AN=2184 GT:DS:GL:BD 0.36950549 0
1 17371586 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.980;LDAF=0.0351;AVGPOST=0.9989;RSQ=0.9877;ERATE=0.0004;THETA=0.0004;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 17371593 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17371685 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4960;AVGPOST=0.9994;RSQ=0.9990;ERATE=0.0004;THETA=0.0002;AC=1081;AN=2184 GT:DS:GL:BD 0.49496338 0
1 17371755 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3705;AVGPOST=0.9989;RSQ=0.9982;ERATE=0.0004;THETA=0.0021;AC=807;AN=2184 GT:DS:GL:BD 0.36950549 0
1 17371854 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.809;LDAF=0.0020;AVGPOST=0.9990;RSQ=0.7864;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17371891 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7588;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17371925 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9215;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17371973 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0033;AVGPOST=0.9995;RSQ=0.9300;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 17372027 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3509;AVGPOST=0.9968;RSQ=0.9949;ERATE=0.0004;THETA=0.0005;AC=767;AN=2184 GT:DS:GL:BD 0.35119048 0
1 17372117 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3723;AVGPOST=0.9974;RSQ=0.9963;ERATE=0.0007;THETA=0.0003;AC=810;AN=2184 GT:DS:GL:BD 0.37087911 0
1 17372129 . A AG 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17372202 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0089;AVGPOST=0.9960;RSQ=0.8127;ERATE=0.0005;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 17372397 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3718;AVGPOST=0.9986;RSQ=0.9976;ERATE=0.0004;THETA=0.0003;AC=809;AN=2184 GT:DS:GL:BD 0.37042123 0
1 17372467 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3717;AVGPOST=0.9993;RSQ=0.9987;ERATE=0.0004;THETA=0.0009;AC=809;AN=2184 GT:DS:GL:BD 0.37042123 0
1 17372511 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3718;AVGPOST=0.9982;RSQ=0.9968;ERATE=0.0006;THETA=0.0003;AC=809;AN=2184 GT:DS:GL:BD 0.37042123 0
1 17372532 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.5875;ERATE=0.0007;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17372622 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3716;AVGPOST=0.9988;RSQ=0.9979;ERATE=0.0004;THETA=0.0004;AC=809;AN=2184 GT:DS:GL:BD 0.37042123 0
1 17372684 . AATC A 104 PASS INDEL;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4529;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17372715 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4871;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17373075 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17373076 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6677;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17373106 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17373123 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.4815;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17373205 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.993;LDAF=0.3703;AVGPOST=0.9947;RSQ=0.9911;ERATE=0.0011;THETA=0.0003;AC=807;AN=2184 GT:DS:GL:BD 0.36950549 0
1 17373317 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.3705;AVGPOST=0.9941;RSQ=0.9908;ERATE=0.0009;THETA=0.0004;AC=808;AN=2184 GT:DS:GL:BD 0.36996338 0
1 17373373 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.752;LDAF=0.0025;AVGPOST=0.9972;RSQ=0.4952;ERATE=0.0007;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17373391 . TAGTAGAG T 2181 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0124;AVGPOST=0.9957;RSQ=0.8484;ERATE=0.0004;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 17373418 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6181;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17373492 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.5106;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17373546 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0041;AVGPOST=0.9965;RSQ=0.6483;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 17373554 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7015;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17373708 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8284;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17373751 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.959;LDAF=0.3681;AVGPOST=0.9864;RSQ=0.9777;ERATE=0.0039;THETA=0.0005;AC=803;AN=2184 GT:DS:GL:BD 0.36767399 0
1 17373864 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7951;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17373877 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.796;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7163;ERATE=0.0007;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17373959 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3713;AVGPOST=0.9986;RSQ=0.9975;ERATE=0.0005;THETA=0.0005;AC=809;AN=2184 GT:DS:GL:BD 0.37042123 0
1 17374001 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.983;LDAF=0.1068;AVGPOST=0.9982;RSQ=0.9919;ERATE=0.0008;THETA=0.0005;AC=233;AN=2184 GT:DS:GL:BD 0.10668498 0
1 17374326 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0605;AVGPOST=0.9981;RSQ=0.9858;ERATE=0.0004;THETA=0.0004;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 17374362 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9614;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 17374435 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.864;LDAF=0.0030;AVGPOST=0.9989;RSQ=0.8345;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 17374492 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0028;AVGPOST=0.9992;RSQ=0.8808;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 17374529 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0056;AVGPOST=0.9989;RSQ=0.9128;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 17374569 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7129;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17374603 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7375;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17374663 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3715;AVGPOST=0.9993;RSQ=0.9988;ERATE=0.0004;THETA=0.0004;AC=809;AN=2184 GT:DS:GL:BD 0.37042123 0
1 17374688 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3714;AVGPOST=0.9987;RSQ=0.9979;ERATE=0.0005;THETA=0.0003;AC=809;AN=2184 GT:DS:GL:BD 0.37042123 0
1 17374742 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3716;AVGPOST=0.9989;RSQ=0.9981;ERATE=0.0004;THETA=0.0005;AC=809;AN=2184 GT:DS:GL:BD 0.37042123 0
1 17374782 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 17374816 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8554;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17374852 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.957;LDAF=0.0161;AVGPOST=0.9984;RSQ=0.9620;ERATE=0.0004;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 17374958 rs72008841 CTG C 41026 PASS INDEL;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.3717;AVGPOST=0.9863;RSQ=0.9788;ERATE=0.0038;THETA=0.0008;AC=809;AN=2184 GT:DS:GL:BD 0.37042123 0
1 17375033 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9654;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 17375208 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.930;LDAF=0.0213;AVGPOST=0.9952;RSQ=0.9241;ERATE=0.0004;THETA=0.0002;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 17375522 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.750;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4790;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17375562 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.986;LDAF=0.3719;AVGPOST=0.9970;RSQ=0.9948;ERATE=0.0007;THETA=0.0004;AC=810;AN=2184 GT:DS:GL:BD 0.37087911 0
1 17375580 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.986;LDAF=0.3735;AVGPOST=0.9959;RSQ=0.9932;ERATE=0.0008;THETA=0.0005;AC=813;AN=2184 GT:DS:GL:BD 0.37225273 0
1 17375704 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.757;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6193;ERATE=0.0004;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 17375774 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3704;AVGPOST=0.9971;RSQ=0.9950;ERATE=0.0008;THETA=0.0006;AC=808;AN=2184 GT:DS:GL:BD 0.36996338 0
1 17375796 . C CT 107 PASS INDEL;BAVGPOST=0.979;BRSQ=0.509;LDAF=0.0408;AVGPOST=0.9463;RSQ=0.4324;ERATE=0.0147;THETA=0.0005;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 17375855 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.554;LDAF=0.0035;AVGPOST=0.9947;RSQ=0.3922;ERATE=0.0016;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 17375867 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0116;AVGPOST=0.9955;RSQ=0.8329;ERATE=0.0006;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 17376058 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0294;AVGPOST=0.9940;RSQ=0.9168;ERATE=0.0005;THETA=0.0003;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 17376102 . CTTTAAA C 221 PASS INDEL;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4956;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17376127 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.940;LDAF=0.9477;AVGPOST=0.9890;RSQ=0.9147;ERATE=0.0025;THETA=0.0004;AC=2079;AN=2184 GT:DS:GL:BD 0.95192307 1
1 17376244 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.962;BRSQ=0.924;LDAF=0.3217;AVGPOST=0.9571;RSQ=0.9247;ERATE=0.0103;THETA=0.0003;AC=715;AN=2184 GT:DS:GL:BD 0.32738096 0
1 17376296 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.3723;AVGPOST=0.9950;RSQ=0.9915;ERATE=0.0010;THETA=0.0006;AC=809;AN=2184 GT:DS:GL:BD 0.37042123 0
1 17376301 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.987;LDAF=0.1306;AVGPOST=0.9934;RSQ=0.9787;ERATE=0.0010;THETA=0.0010;AC=281;AN=2184 GT:DS:GL:BD 0.12866300 0
1 17376376 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4684;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17376469 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9320;ERATE=0.0004;THETA=0.0012;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 17376474 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.6106;ERATE=0.0004;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 17376476 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.917;LDAF=0.0288;AVGPOST=0.9920;RSQ=0.8924;ERATE=0.0006;THETA=0.0005;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 17376510 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.862;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9156;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 17376511 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3702;AVGPOST=0.9984;RSQ=0.9972;ERATE=0.0006;THETA=0.0005;AC=806;AN=2184 GT:DS:GL:BD 0.36904761 0
1 17376584 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.846;LDAF=0.0050;AVGPOST=0.9970;RSQ=0.7657;ERATE=0.0005;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0