1092
10000
1 2261003 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0290;AVGPOST=0.9932;RSQ=0.9105;ERATE=0.0005;THETA=0.0002;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 2261068 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.681;LDAF=0.0079;AVGPOST=0.9912;RSQ=0.5343;ERATE=0.0015;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2261177 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.989;LDAF=0.2811;AVGPOST=0.9965;RSQ=0.9942;ERATE=0.0004;THETA=0.0003;AC=613;AN=2184 GT:DS:GL:BD 0.28067765 0
1 2261222 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1272;AVGPOST=0.9975;RSQ=0.9908;ERATE=0.0004;THETA=0.0003;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 2261325 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0034;AVGPOST=0.9985;RSQ=0.7956;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2261462 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0248;AVGPOST=0.9993;RSQ=0.9862;ERATE=0.0004;THETA=0.0004;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 2261491 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0052;AVGPOST=0.9996;RSQ=0.9668;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2261607 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0295;AVGPOST=0.9930;RSQ=0.8916;ERATE=0.0009;THETA=0.0006;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 2261664 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0028;AVGPOST=0.9997;RSQ=0.9651;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2261670 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5164;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2261983 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1499;AVGPOST=0.9985;RSQ=0.9957;ERATE=0.0003;THETA=0.0003;AC=328;AN=2184 GT:DS:GL:BD 0.15018316 0
1 2262030 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4960;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2262037 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2262062 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6556;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2262067 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.5428;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2262076 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0022;AVGPOST=0.9982;RSQ=0.7147;ERATE=0.0009;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2262103 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.820;LDAF=0.0037;AVGPOST=0.9979;RSQ=0.7845;ERATE=0.0005;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2262165 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.914;LDAF=0.0229;AVGPOST=0.9941;RSQ=0.9099;ERATE=0.0004;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 2262225 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0056;AVGPOST=0.9989;RSQ=0.9203;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2262487 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.703;LDAF=0.0050;AVGPOST=0.9983;RSQ=0.8770;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2262555 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.870;LDAF=0.0133;AVGPOST=0.9950;RSQ=0.8466;ERATE=0.0006;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 2262624 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.753;LDAF=0.0106;AVGPOST=0.9940;RSQ=0.7758;ERATE=0.0006;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2262664 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.778;LDAF=0.0371;AVGPOST=0.9893;RSQ=0.8854;ERATE=0.0005;THETA=0.0002;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 2262712 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.498;LDAF=0.0025;AVGPOST=0.9968;RSQ=0.4798;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2262796 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.800;LDAF=0.0086;AVGPOST=0.9936;RSQ=0.7020;ERATE=0.0008;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2263204 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.627;LDAF=0.0023;AVGPOST=0.9964;RSQ=0.3633;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2263243 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.418;LDAF=0.0148;AVGPOST=0.9777;RSQ=0.4254;ERATE=0.0013;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2263249 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.960;LDAF=0.0234;AVGPOST=0.9950;RSQ=0.9134;ERATE=0.0006;THETA=0.0005;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 2263282 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.736;LDAF=0.0262;AVGPOST=0.9824;RSQ=0.7590;ERATE=0.0010;THETA=0.0004;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 2263283 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.828;BRSQ=0.600;LDAF=0.2757;AVGPOST=0.9039;RSQ=0.8478;ERATE=0.0072;THETA=0.0003;AC=591;AN=2184 GT:DS:GL:BD 0.27060440 0
1 2263294 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.908;BRSQ=0.625;LDAF=0.1519;AVGPOST=0.8916;RSQ=0.6707;ERATE=0.0068;THETA=0.0003;AC=292;AN=2184 GT:DS:GL:BD 0.13369964 0
1 2263409 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.639;LDAF=0.0449;AVGPOST=0.9366;RSQ=0.4127;ERATE=0.0030;THETA=0.0003;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 2263422 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.843;BRSQ=0.442;LDAF=0.2022;AVGPOST=0.7824;RSQ=0.4610;ERATE=0.0310;THETA=0.0004;AC=285;AN=2184 GT:DS:GL:BD 0.13049451 0
1 2263427 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.954;LDAF=0.1318;AVGPOST=0.9860;RSQ=0.9504;ERATE=0.0013;THETA=0.0003;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 2263438 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.958;LDAF=0.1293;AVGPOST=0.9894;RSQ=0.9597;ERATE=0.0009;THETA=0.0002;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 2263453 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.410;LDAF=0.0021;AVGPOST=0.9969;RSQ=0.4626;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2263461 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.731;LDAF=0.0082;AVGPOST=0.9949;RSQ=0.7450;ERATE=0.0006;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2263502 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.979;LDAF=0.2793;AVGPOST=0.9902;RSQ=0.9825;ERATE=0.0011;THETA=0.0010;AC=611;AN=2184 GT:DS:GL:BD 0.27976191 0
1 2263635 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.716;LDAF=0.0031;AVGPOST=0.9983;RSQ=0.7521;ERATE=0.0006;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2263666 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1510;AVGPOST=0.9966;RSQ=0.9890;ERATE=0.0009;THETA=0.0002;AC=328;AN=2184 GT:DS:GL:BD 0.15018316 0
1 2263755 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.721;LDAF=0.0049;AVGPOST=0.9954;RSQ=0.6329;ERATE=0.0006;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2263764 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.816;LDAF=0.0430;AVGPOST=0.9750;RSQ=0.7740;ERATE=0.0015;THETA=0.0008;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 2263888 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1496;AVGPOST=0.9986;RSQ=0.9956;ERATE=0.0004;THETA=0.0007;AC=327;AN=2184 GT:DS:GL:BD 0.14972527 0
1 2263947 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2264025 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.842;LDAF=0.0068;AVGPOST=0.9946;RSQ=0.7365;ERATE=0.0012;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2264057 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0027;AVGPOST=0.9978;RSQ=0.6788;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2264062 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.737;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.4938;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2264170 . CT C 640 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0059;AVGPOST=0.9993;RSQ=0.9408;ERATE=0.0004;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2264191 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0054;AVGPOST=0.9993;RSQ=0.9396;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2264248 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0158;AVGPOST=0.9990;RSQ=0.9744;ERATE=0.0004;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 2264697 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.961;LDAF=0.1471;AVGPOST=0.9931;RSQ=0.9801;ERATE=0.0006;THETA=0.0006;AC=322;AN=2184 GT:DS:GL:BD 0.14743590 0
1 2264838 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0028;AVGPOST=0.9988;RSQ=0.8001;ERATE=0.0005;THETA=0.0014;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2264978 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0031;AVGPOST=0.9990;RSQ=0.8777;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2265026 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.2973;AVGPOST=0.9948;RSQ=0.9910;ERATE=0.0004;THETA=0.0005;AC=646;AN=2184 GT:DS:GL:BD 0.29578754 0
1 2265070 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1713;AVGPOST=0.9972;RSQ=0.9921;ERATE=0.0004;THETA=0.0008;AC=374;AN=2184 GT:DS:GL:BD 0.17124543 0
1 2265099 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.944;LDAF=0.0975;AVGPOST=0.9916;RSQ=0.9651;ERATE=0.0004;THETA=0.0005;AC=211;AN=2184 GT:DS:GL:BD 0.09661172 0
1 2265135 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.682;LDAF=0.0029;AVGPOST=0.9966;RSQ=0.5292;ERATE=0.0007;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2265176 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.7794;AVGPOST=0.9867;RSQ=0.9732;ERATE=0.0009;THETA=0.0005;AC=1709;AN=2184 GT:DS:GL:BD 0.78250915 1
1 2265219 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.2986;AVGPOST=0.9931;RSQ=0.9885;ERATE=0.0006;THETA=0.0002;AC=650;AN=2184 GT:DS:GL:BD 0.29761904 0
1 2265252 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.722;LDAF=0.0055;AVGPOST=0.9959;RSQ=0.7148;ERATE=0.0004;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2265377 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0160;AVGPOST=0.9991;RSQ=0.9768;ERATE=0.0004;THETA=0.0037;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 2265411 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.767;LDAF=0.0031;AVGPOST=0.9963;RSQ=0.5040;ERATE=0.0006;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2265530 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0225;AVGPOST=0.9982;RSQ=0.9698;ERATE=0.0004;THETA=0.0003;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 2265643 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.777;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.6462;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2265675 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.741;LDAF=0.0039;AVGPOST=0.9974;RSQ=0.7174;ERATE=0.0010;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2265788 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0045;AVGPOST=0.9981;RSQ=0.8201;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2265794 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.970;LDAF=0.2735;AVGPOST=0.9871;RSQ=0.9766;ERATE=0.0015;THETA=0.0008;AC=598;AN=2184 GT:DS:GL:BD 0.27380952 0
1 2265849 . TG T 103 PASS INDEL;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0055;AVGPOST=0.9940;RSQ=0.5648;ERATE=0.0009;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2265881 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.1071;AVGPOST=0.9963;RSQ=0.9852;ERATE=0.0005;THETA=0.0019;AC=232;AN=2184 GT:DS:GL:BD 0.10622711 0
1 2265892 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2265958 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.969;LDAF=0.0199;AVGPOST=0.9968;RSQ=0.9377;ERATE=0.0005;THETA=0.0012;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 2265969 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.935;LDAF=0.7527;AVGPOST=0.9230;RSQ=0.8541;ERATE=0.0090;THETA=0.0005;AC=1668;AN=2184 GT:DS:GL:BD 0.76373625 1
1 2266019 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.698;LDAF=0.0022;AVGPOST=0.9966;RSQ=0.3873;ERATE=0.0007;THETA=0.0050;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2266078 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.989;LDAF=0.6439;AVGPOST=0.9898;RSQ=0.9844;ERATE=0.0005;THETA=0.0004;AC=1407;AN=2184 GT:DS:GL:BD 0.64423078 1
1 2266111 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2266121 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.974;LDAF=0.0316;AVGPOST=0.9941;RSQ=0.9296;ERATE=0.0014;THETA=0.0003;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 2266127 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2266231 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.940;LDAF=0.0573;AVGPOST=0.9957;RSQ=0.9725;ERATE=0.0006;THETA=0.0009;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 2266262 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.742;LDAF=0.0044;AVGPOST=0.9989;RSQ=0.9172;ERATE=0.0003;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2266312 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.964;LDAF=0.0537;AVGPOST=0.9957;RSQ=0.9716;ERATE=0.0006;THETA=0.0008;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 2266350 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0127;AVGPOST=0.9966;RSQ=0.9126;ERATE=0.0004;THETA=0.0006;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 2266358 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4177;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2266399 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.795;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.6712;ERATE=0.0003;THETA=0.0077;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2266456 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0176;AVGPOST=0.9975;RSQ=0.9535;ERATE=0.0005;THETA=0.0023;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 2266505 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.6450;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2266552 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.864;LDAF=0.0065;AVGPOST=0.9987;RSQ=0.9063;ERATE=0.0004;THETA=0.0090;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2266563 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.656;LDAF=0.0024;AVGPOST=0.9975;RSQ=0.5332;ERATE=0.0007;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2266709 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4097;ERATE=0.0006;THETA=0.0043;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2266714 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.911;LDAF=0.1878;AVGPOST=0.9787;RSQ=0.9474;ERATE=0.0011;THETA=0.0004;AC=404;AN=2184 GT:DS:GL:BD 0.18498169 0
1 2266725 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.915;LDAF=0.1861;AVGPOST=0.9804;RSQ=0.9513;ERATE=0.0007;THETA=0.0037;AC=400;AN=2184 GT:DS:GL:BD 0.18315019 0
1 2266766 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0206;AVGPOST=0.9973;RSQ=0.9429;ERATE=0.0005;THETA=0.0021;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 2266806 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0045;AVGPOST=0.9989;RSQ=0.8826;ERATE=0.0005;THETA=0.0017;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2266807 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.944;BRSQ=0.842;LDAF=0.2013;AVGPOST=0.9641;RSQ=0.9199;ERATE=0.0023;THETA=0.0053;AC=437;AN=2184 GT:DS:GL:BD 0.20009157 0
1 2266933 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.939;BRSQ=0.861;LDAF=0.2972;AVGPOST=0.9090;RSQ=0.8265;ERATE=0.0134;THETA=0.0009;AC=631;AN=2184 GT:DS:GL:BD 0.28891942 0
1 2266936 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.625;LDAF=0.0096;AVGPOST=0.9871;RSQ=0.4983;ERATE=0.0010;THETA=0.0026;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2267053 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.854;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9311;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2267075 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0016;AVGPOST=0.9980;RSQ=0.5165;ERATE=0.0004;THETA=0.0018;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2267123 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.791;LDAF=0.0262;AVGPOST=0.9808;RSQ=0.7056;ERATE=0.0025;THETA=0.0003;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 2267148 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.805;LDAF=0.0085;AVGPOST=0.9943;RSQ=0.7534;ERATE=0.0005;THETA=0.0009;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2267202 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.372;LDAF=0.0065;AVGPOST=0.9909;RSQ=0.4633;ERATE=0.0006;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2267251 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.804;LDAF=0.0114;AVGPOST=0.9945;RSQ=0.8177;ERATE=0.0006;THETA=0.0056;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 2267252 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.630;LDAF=0.0136;AVGPOST=0.9872;RSQ=0.6132;ERATE=0.0020;THETA=0.0039;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 2267281 . CCAGCG C 769 PASS INDEL;BAVGPOST=0.985;BRSQ=0.630;LDAF=0.0368;AVGPOST=0.9664;RSQ=0.6541;ERATE=0.0032;THETA=0.0006;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 2267283 . AGC A 89 PASS INDEL;BAVGPOST=0.996;BRSQ=0.531;LDAF=0.0090;AVGPOST=0.9912;RSQ=0.6424;ERATE=0.0006;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 2267297 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.954;BRSQ=0.783;LDAF=0.1206;AVGPOST=0.9373;RSQ=0.7848;ERATE=0.0092;THETA=0.0003;AC=227;AN=2184 GT:DS:GL:BD 0.10393773 0
1 2267317 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.621;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.6006;ERATE=0.0004;THETA=0.0037;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2267392 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.583;LDAF=0.0062;AVGPOST=0.9954;RSQ=0.7086;ERATE=0.0007;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2267393 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.663;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.3616;ERATE=0.0006;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2267435 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.496;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4585;ERATE=0.0004;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2267469 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.846;LDAF=0.0063;AVGPOST=0.9983;RSQ=0.8959;ERATE=0.0004;THETA=0.0009;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2267475 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0056;AVGPOST=0.9953;RSQ=0.6782;ERATE=0.0008;THETA=0.0047;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2267557 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.880;LDAF=0.0752;AVGPOST=0.9824;RSQ=0.9030;ERATE=0.0049;THETA=0.0006;AC=158;AN=2184 GT:DS:GL:BD 0.07234433 0
1 2267569 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.837;LDAF=0.0036;AVGPOST=0.9975;RSQ=0.7227;ERATE=0.0006;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2267579 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6949;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2267637 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7421;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2267638 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0040;AVGPOST=0.9992;RSQ=0.9027;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2267663 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.896;LDAF=0.0168;AVGPOST=0.9929;RSQ=0.8479;ERATE=0.0005;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 2267739 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0027;AVGPOST=0.9993;RSQ=0.8691;ERATE=0.0004;THETA=0.0018;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2267886 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.875;LDAF=0.0049;AVGPOST=0.9994;RSQ=0.9536;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2267900 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8646;ERATE=0.0003;THETA=0.0028;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2267928 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6586;ERATE=0.0004;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2267979 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0500;ERATE=0.0003;THETA=0.0009;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 2268008 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0028;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2268040 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0165;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0029;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 2268108 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0057;AVGPOST=0.9992;RSQ=0.9506;ERATE=0.0003;THETA=0.0014;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2268136 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8651;ERATE=0.0003;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2268180 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.697;LDAF=0.0055;AVGPOST=0.9932;RSQ=0.5546;ERATE=0.0035;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2268192 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2268242 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0038;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2268264 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2268277 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2268280 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8863;ERATE=0.0003;THETA=0.0030;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2268477 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.747;LDAF=0.0030;AVGPOST=0.9967;RSQ=0.5137;ERATE=0.0007;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2268518 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.788;LDAF=0.0038;AVGPOST=0.9978;RSQ=0.7728;ERATE=0.0004;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2268570 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.942;BRSQ=0.892;LDAF=0.4224;AVGPOST=0.9415;RSQ=0.9087;ERATE=0.0060;THETA=0.0004;AC=918;AN=2184 GT:DS:GL:BD 0.42032966 0
1 2268580 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.946;BRSQ=0.906;LDAF=0.4160;AVGPOST=0.9498;RSQ=0.9238;ERATE=0.0055;THETA=0.0009;AC=917;AN=2184 GT:DS:GL:BD 0.41987181 0
1 2268607 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.683;LDAF=0.0037;AVGPOST=0.9950;RSQ=0.4239;ERATE=0.0005;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2268632 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.767;LDAF=0.0048;AVGPOST=0.9957;RSQ=0.6428;ERATE=0.0005;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2268638 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.835;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8727;ERATE=0.0004;THETA=0.0053;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2268650 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.962;LDAF=0.4357;AVGPOST=0.9819;RSQ=0.9727;ERATE=0.0009;THETA=0.0006;AC=953;AN=2184 GT:DS:GL:BD 0.43635532 0
1 2268662 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.777;LDAF=0.0117;AVGPOST=0.9927;RSQ=0.7554;ERATE=0.0005;THETA=0.0007;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2268668 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.978;LDAF=0.4931;AVGPOST=0.9592;RSQ=0.9409;ERATE=0.0057;THETA=0.0003;AC=1086;AN=2184 GT:DS:GL:BD 0.49725273 0
1 2268678 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.955;LDAF=0.8081;AVGPOST=0.9791;RSQ=0.9526;ERATE=0.0013;THETA=0.0026;AC=1767;AN=2184 GT:DS:GL:BD 0.80906594 1
1 2268681 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.669;LDAF=0.0027;AVGPOST=0.9979;RSQ=0.6662;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2268738 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.960;LDAF=0.6291;AVGPOST=0.9665;RSQ=0.9464;ERATE=0.0037;THETA=0.0002;AC=1376;AN=2184 GT:DS:GL:BD 0.63003665 1
1 2268760 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.607;LDAF=0.0063;AVGPOST=0.9938;RSQ=0.6145;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2268791 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.970;LDAF=0.6408;AVGPOST=0.9736;RSQ=0.9578;ERATE=0.0028;THETA=0.0003;AC=1399;AN=2184 GT:DS:GL:BD 0.64056778 1
1 2268993 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.699;LDAF=0.0039;AVGPOST=0.9958;RSQ=0.5595;ERATE=0.0010;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2269050 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.764;LDAF=0.0049;AVGPOST=0.9970;RSQ=0.7423;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2269053 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.647;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5376;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2269082 . CCA C 14392 PASS INDEL;BAVGPOST=0.881;BRSQ=0.358;LDAF=0.8244;AVGPOST=0.7920;RSQ=0.4012;ERATE=0.0472;THETA=0.0003;AC=1960;AN=2184 GT:DS:GL:BD 0.89743590 1
1 2269302 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.709;LDAF=0.0056;AVGPOST=0.9939;RSQ=0.5693;ERATE=0.0014;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2269304 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.719;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4298;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2269308 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0030;AVGPOST=0.9961;RSQ=0.5631;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2269328 . CAA C 72 PASS INDEL;BAVGPOST=1.000;BRSQ=0.665;LDAF=0.0041;AVGPOST=0.9952;RSQ=0.5705;ERATE=0.0004;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2269498 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0015;AVGPOST=0.9977;RSQ=0.3207;ERATE=0.0008;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2269518 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.609;LDAF=0.0040;AVGPOST=0.9956;RSQ=0.5499;ERATE=0.0015;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2269577 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0021;AVGPOST=0.9966;RSQ=0.4124;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2269588 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.4949;ERATE=0.0004;THETA=0.0067;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2269622 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.5471;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2269671 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.915;LDAF=0.0438;AVGPOST=0.9940;RSQ=0.9512;ERATE=0.0004;THETA=0.0004;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 2269803 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0016;AVGPOST=0.9982;RSQ=0.5019;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2269881 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.1465;AVGPOST=0.9942;RSQ=0.9811;ERATE=0.0011;THETA=0.0004;AC=317;AN=2184 GT:DS:GL:BD 0.14514652 0
1 2269899 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.983;LDAF=0.4261;AVGPOST=0.9886;RSQ=0.9827;ERATE=0.0012;THETA=0.0018;AC=934;AN=2184 GT:DS:GL:BD 0.42765567 0
1 2269912 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5110;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2269948 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.986;LDAF=0.1675;AVGPOST=0.9934;RSQ=0.9816;ERATE=0.0006;THETA=0.0008;AC=365;AN=2184 GT:DS:GL:BD 0.16712454 0
1 2270009 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.967;LDAF=0.4143;AVGPOST=0.9850;RSQ=0.9765;ERATE=0.0024;THETA=0.0005;AC=905;AN=2184 GT:DS:GL:BD 0.41437730 0
1 2270035 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.683;LDAF=0.0055;AVGPOST=0.9963;RSQ=0.7206;ERATE=0.0006;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2270098 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.979;LDAF=0.6009;AVGPOST=0.9862;RSQ=0.9788;ERATE=0.0011;THETA=0.0048;AC=1314;AN=2184 GT:DS:GL:BD 0.60164833 1
1 2270127 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0027;AVGPOST=0.9994;RSQ=0.9179;ERATE=0.0007;THETA=0.0026;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2270136 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0029;AVGPOST=0.9978;RSQ=0.7010;ERATE=0.0006;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2270159 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.966;LDAF=0.0244;AVGPOST=0.9979;RSQ=0.9619;ERATE=0.0004;THETA=0.0007;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 2270170 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.937;LDAF=0.0192;AVGPOST=0.9960;RSQ=0.9181;ERATE=0.0004;THETA=0.0033;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 2270735 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.910;LDAF=0.1186;AVGPOST=0.9693;RSQ=0.8971;ERATE=0.0021;THETA=0.0030;AC=255;AN=2184 GT:DS:GL:BD 0.11675824 0
1 2270762 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.460;LDAF=0.0056;AVGPOST=0.9937;RSQ=0.5693;ERATE=0.0005;THETA=0.0025;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2271177 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.600;LDAF=0.0016;AVGPOST=0.9976;RSQ=0.3551;ERATE=0.0006;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2271243 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.667;LDAF=0.0071;AVGPOST=0.9968;RSQ=0.8032;ERATE=0.0005;THETA=0.0028;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2271284 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.723;LDAF=0.0037;AVGPOST=0.9961;RSQ=0.5736;ERATE=0.0006;THETA=0.0025;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2271321 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.679;LDAF=0.0036;AVGPOST=0.9971;RSQ=0.6622;ERATE=0.0006;THETA=0.0040;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2271323 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.777;LDAF=0.0045;AVGPOST=0.9989;RSQ=0.8996;ERATE=0.0004;THETA=0.0085;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2271421 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.608;LDAF=0.0034;AVGPOST=0.9948;RSQ=0.4134;ERATE=0.0007;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2271430 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0022;AVGPOST=0.9981;RSQ=0.6633;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2271523 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.679;LDAF=0.0014;AVGPOST=0.9977;RSQ=0.3596;ERATE=0.0004;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2271532 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.537;LDAF=0.0018;AVGPOST=0.9975;RSQ=0.4262;ERATE=0.0004;THETA=0.0101;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2271642 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0052;AVGPOST=0.9997;RSQ=0.9745;ERATE=0.0003;THETA=0.0027;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2271658 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.753;LDAF=0.0060;AVGPOST=0.9962;RSQ=0.7617;ERATE=0.0005;THETA=0.0016;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2271665 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6199;ERATE=0.0003;THETA=0.0045;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2271674 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.982;LDAF=0.2047;AVGPOST=0.9873;RSQ=0.9734;ERATE=0.0026;THETA=0.0036;AC=443;AN=2184 GT:DS:GL:BD 0.20283882 0
1 2271689 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0066;AVGPOST=0.9988;RSQ=0.9380;ERATE=0.0003;THETA=0.0018;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2271706 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.983;LDAF=0.1390;AVGPOST=0.9950;RSQ=0.9826;ERATE=0.0008;THETA=0.0005;AC=301;AN=2184 GT:DS:GL:BD 0.13782051 0
1 2271735 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.779;LDAF=0.0024;AVGPOST=0.9995;RSQ=0.8957;ERATE=0.0003;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2271780 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.732;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7164;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2271812 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.734;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8613;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2271827 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0052;AVGPOST=0.9996;RSQ=0.9636;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2271860 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9244;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2271864 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.6787;AVGPOST=0.9922;RSQ=0.9873;ERATE=0.0004;THETA=0.0003;AC=1485;AN=2184 GT:DS:GL:BD 0.67994505 1
1 2272003 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.940;LDAF=0.1921;AVGPOST=0.9822;RSQ=0.9572;ERATE=0.0028;THETA=0.0050;AC=413;AN=2184 GT:DS:GL:BD 0.18910256 0
1 2272064 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1822;AVGPOST=0.9970;RSQ=0.9928;ERATE=0.0005;THETA=0.0005;AC=399;AN=2184 GT:DS:GL:BD 0.18269230 0
1 2272160 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.970;LDAF=0.0186;AVGPOST=0.9958;RSQ=0.9085;ERATE=0.0005;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 2272200 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.741;LDAF=0.0089;AVGPOST=0.9937;RSQ=0.7201;ERATE=0.0010;THETA=0.0023;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2272203 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1933;AVGPOST=0.9969;RSQ=0.9921;ERATE=0.0008;THETA=0.0003;AC=422;AN=2184 GT:DS:GL:BD 0.19322345 0
1 2272226 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.979;LDAF=0.2819;AVGPOST=0.9837;RSQ=0.9707;ERATE=0.0007;THETA=0.0003;AC=612;AN=2184 GT:DS:GL:BD 0.28021979 0
1 2272235 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.764;LDAF=0.0028;AVGPOST=0.9963;RSQ=0.4763;ERATE=0.0005;THETA=0.0026;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2272246 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1768;AVGPOST=0.9981;RSQ=0.9947;ERATE=0.0004;THETA=0.0012;AC=385;AN=2184 GT:DS:GL:BD 0.17628205 0
1 2272320 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.467;LDAF=0.0041;AVGPOST=0.9961;RSQ=0.6314;ERATE=0.0007;THETA=0.0038;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2272321 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.341;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.5810;ERATE=0.0005;THETA=0.0033;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2272435 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5045;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2272481 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1359;AVGPOST=0.9955;RSQ=0.9857;ERATE=0.0004;THETA=0.0006;AC=296;AN=2184 GT:DS:GL:BD 0.13553114 0
1 2272500 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0062;AVGPOST=0.9984;RSQ=0.9108;ERATE=0.0003;THETA=0.0009;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2272666 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.890;LDAF=0.0041;AVGPOST=0.9986;RSQ=0.8658;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2272793 . GC G 1024 PASS INDEL;BAVGPOST=0.997;BRSQ=0.951;LDAF=0.0172;AVGPOST=0.9972;RSQ=0.9270;ERATE=0.0008;THETA=0.0016;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 2272857 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0022;AVGPOST=0.9989;RSQ=0.7634;ERATE=0.0006;THETA=0.0029;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2272890 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.1755;AVGPOST=0.9917;RSQ=0.9788;ERATE=0.0007;THETA=0.0005;AC=381;AN=2184 GT:DS:GL:BD 0.17445055 0
1 2272903 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.8741;AVGPOST=0.9923;RSQ=0.9732;ERATE=0.0007;THETA=0.0003;AC=1912;AN=2184 GT:DS:GL:BD 0.87545788 1
1 2272915 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7946;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2272985 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0048;AVGPOST=0.9936;RSQ=0.4400;ERATE=0.0013;THETA=0.0051;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2273065 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.676;LDAF=0.0048;AVGPOST=0.9982;RSQ=0.8514;ERATE=0.0003;THETA=0.0011;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2273144 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.912;BRSQ=0.814;LDAF=0.4619;AVGPOST=0.8757;RSQ=0.7830;ERATE=0.0512;THETA=0.0013;AC=995;AN=2184 GT:DS:GL:BD 0.45558608 0
1 2273202 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0024;AVGPOST=0.9977;RSQ=0.5996;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2273245 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.734;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4398;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2273286 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.8809;AVGPOST=0.9941;RSQ=0.9779;ERATE=0.0005;THETA=0.0005;AC=1926;AN=2184 GT:DS:GL:BD 0.88186812 1
1 2273410 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0020;AVGPOST=0.9974;RSQ=0.4896;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2273470 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4988;ERATE=0.0004;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2273471 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.850;LDAF=0.0036;AVGPOST=0.9953;RSQ=0.4906;ERATE=0.0006;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2273507 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5687;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2273567 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.849;LDAF=0.0304;AVGPOST=0.9908;RSQ=0.8855;ERATE=0.0004;THETA=0.0040;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 2273569 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4428;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2273572 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.984;LDAF=0.0918;AVGPOST=0.9941;RSQ=0.9746;ERATE=0.0003;THETA=0.0002;AC=200;AN=2184 GT:DS:GL:BD 0.09157509 0
1 2273576 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.984;LDAF=0.0926;AVGPOST=0.9923;RSQ=0.9683;ERATE=0.0005;THETA=0.0022;AC=201;AN=2184 GT:DS:GL:BD 0.09203297 0
1 2273591 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.819;LDAF=0.0142;AVGPOST=0.9964;RSQ=0.9019;ERATE=0.0003;THETA=0.0008;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2273614 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.854;LDAF=0.0097;AVGPOST=0.9977;RSQ=0.9063;ERATE=0.0004;THETA=0.0040;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 2273620 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0054;AVGPOST=0.9978;RSQ=0.8481;ERATE=0.0004;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2273633 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.703;LDAF=0.0016;AVGPOST=0.9976;RSQ=0.4381;ERATE=0.0005;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2273654 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5142;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2273669 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.979;LDAF=0.0404;AVGPOST=0.9968;RSQ=0.9675;ERATE=0.0004;THETA=0.0041;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 2273673 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.816;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7357;ERATE=0.0004;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2273686 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.637;LDAF=0.0030;AVGPOST=0.9985;RSQ=0.8056;ERATE=0.0003;THETA=0.0025;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2273863 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4325;ERATE=0.0004;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2273903 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6134;ERATE=0.0003;THETA=0.0045;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2273905 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.951;BRSQ=0.928;LDAF=0.5264;AVGPOST=0.9560;RSQ=0.9355;ERATE=0.0062;THETA=0.0043;AC=1155;AN=2184 GT:DS:GL:BD 0.52884614 1
1 2274092 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.896;LDAF=0.0161;AVGPOST=0.9909;RSQ=0.7630;ERATE=0.0015;THETA=0.0011;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 2274096 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.904;LDAF=0.0157;AVGPOST=0.9931;RSQ=0.8241;ERATE=0.0006;THETA=0.0112;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 2274107 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.793;LDAF=0.0094;AVGPOST=0.9932;RSQ=0.7088;ERATE=0.0013;THETA=0.0046;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2274173 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.934;BRSQ=0.797;LDAF=0.1943;AVGPOST=0.9085;RSQ=0.7844;ERATE=0.0163;THETA=0.0007;AC=373;AN=2184 GT:DS:GL:BD 0.17078754 0
1 2274277 . TTA T 1078 PASS INDEL;BAVGPOST=0.930;BRSQ=0.392;LDAF=0.1255;AVGPOST=0.8435;RSQ=0.4250;ERATE=0.0223;THETA=0.0031;AC=144;AN=2184 GT:DS:GL:BD 0.06593407 0
1 2274302 . TTTTA T 12772 PASS INDEL;BAVGPOST=0.612;BRSQ=0.289;LDAF=0.5562;AVGPOST=0.6694;RSQ=0.4207;ERATE=0.0641;THETA=0.0044;AC=1269;AN=2184 GT:DS:GL:BD 0.58104396 1
1 2274315 . AT A 1202 PASS INDEL;BAVGPOST=0.833;BRSQ=0.239;LDAF=0.1879;AVGPOST=0.7643;RSQ=0.3558;ERATE=0.0285;THETA=0.0002;AC=213;AN=2184 GT:DS:GL:BD 0.09752747 0
1 2274320 . AT A 1155 PASS INDEL;BAVGPOST=0.861;BRSQ=0.304;LDAF=0.1809;AVGPOST=0.7760;RSQ=0.3718;ERATE=0.0245;THETA=0.0005;AC=208;AN=2184 GT:DS:GL:BD 0.09523810 0
1 2274325 rs56189014 AT A 2560 PASS INDEL;BAVGPOST=0.898;BRSQ=0.562;LDAF=0.1413;AVGPOST=0.9057;RSQ=0.7059;ERATE=0.0065;THETA=0.0048;AC=256;AN=2184 GT:DS:GL:BD 0.11721612 0
1 2274437 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.625;LDAF=0.0046;AVGPOST=0.9942;RSQ=0.5110;ERATE=0.0005;THETA=0.0044;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2274438 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.943;LDAF=0.3207;AVGPOST=0.9740;RSQ=0.9546;ERATE=0.0013;THETA=0.0003;AC=706;AN=2184 GT:DS:GL:BD 0.32326007 0
1 2274504 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0017;AVGPOST=0.9974;RSQ=0.3763;ERATE=0.0006;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2274530 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.608;LDAF=0.0038;AVGPOST=0.9957;RSQ=0.5501;ERATE=0.0007;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2274651 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.631;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6572;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2274729 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0388;AVGPOST=0.9979;RSQ=0.9769;ERATE=0.0004;THETA=0.0005;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 2274884 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.963;LDAF=0.1852;AVGPOST=0.9854;RSQ=0.9641;ERATE=0.0010;THETA=0.0009;AC=401;AN=2184 GT:DS:GL:BD 0.18360806 0
1 2274956 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.3000;AVGPOST=0.9882;RSQ=0.9787;ERATE=0.0009;THETA=0.0003;AC=654;AN=2184 GT:DS:GL:BD 0.29945055 0
1 2275007 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0;LDAF=0.0037;AVGPOST=0.9940;RSQ=0.3855;ERATE=0.0008;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2275033 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.846;LDAF=0.0086;AVGPOST=0.9952;RSQ=0.7911;ERATE=0.0004;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2275138 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3018;AVGPOST=0.9908;RSQ=0.9832;ERATE=0.0010;THETA=0.0002;AC=657;AN=2184 GT:DS:GL:BD 0.30082417 0
1 2275245 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0409;AVGPOST=0.9951;RSQ=0.9497;ERATE=0.0007;THETA=0.0005;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 2275376 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.985;LDAF=0.4443;AVGPOST=0.9743;RSQ=0.9597;ERATE=0.0017;THETA=0.0004;AC=971;AN=2184 GT:DS:GL:BD 0.44459707 0
1 2275420 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.791;LDAF=0.0106;AVGPOST=0.9947;RSQ=0.8129;ERATE=0.0006;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 2275430 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.671;LDAF=0.0266;AVGPOST=0.9878;RSQ=0.8026;ERATE=0.0009;THETA=0.0005;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 2275566 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4897;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2275695 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.968;LDAF=0.1654;AVGPOST=0.9928;RSQ=0.9796;ERATE=0.0010;THETA=0.0011;AC=359;AN=2184 GT:DS:GL:BD 0.16437729 0
1 2275949 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.982;LDAF=0.8643;AVGPOST=0.9970;RSQ=0.9887;ERATE=0.0004;THETA=0.0004;AC=1891;AN=2184 GT:DS:GL:BD 0.86584246 1
1 2275972 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.739;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4467;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2276022 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.956;LDAF=0.1873;AVGPOST=0.9952;RSQ=0.9870;ERATE=0.0007;THETA=0.0006;AC=410;AN=2184 GT:DS:GL:BD 0.18772894 0
1 2276073 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.987;LDAF=0.1664;AVGPOST=0.9958;RSQ=0.9876;ERATE=0.0004;THETA=0.0004;AC=361;AN=2184 GT:DS:GL:BD 0.16529304 0
1 2276113 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.667;LDAF=0.0043;AVGPOST=0.9944;RSQ=0.4889;ERATE=0.0005;THETA=0.0015;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2276196 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1700;AVGPOST=0.9920;RSQ=0.9800;ERATE=0.0006;THETA=0.0002;AC=365;AN=2184 GT:DS:GL:BD 0.16712454 0
1 2276200 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.920;BRSQ=0.868;LDAF=0.4006;AVGPOST=0.9271;RSQ=0.9057;ERATE=0.0063;THETA=0.0006;AC=847;AN=2184 GT:DS:GL:BD 0.38782051 0
1 2276249 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0027;AVGPOST=0.9958;RSQ=0.4230;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2276288 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0388;AVGPOST=0.9983;RSQ=0.9819;ERATE=0.0003;THETA=0.0003;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 2276306 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.757;LDAF=0.0032;AVGPOST=0.9972;RSQ=0.6246;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2276350 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.860;LDAF=0.0056;AVGPOST=0.9973;RSQ=0.8207;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2276371 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.919;LDAF=0.2188;AVGPOST=0.9731;RSQ=0.9469;ERATE=0.0010;THETA=0.0006;AC=464;AN=2184 GT:DS:GL:BD 0.21245421 0
1 2276419 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.983;LDAF=0.2077;AVGPOST=0.9902;RSQ=0.9766;ERATE=0.0035;THETA=0.0003;AC=452;AN=2184 GT:DS:GL:BD 0.20695971 0
1 2276429 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0380;AVGPOST=0.9998;RSQ=0.9977;ERATE=0.0003;THETA=0.0003;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 2276442 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7436;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2276526 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.570;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4967;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2276585 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.964;LDAF=0.0167;AVGPOST=0.9967;RSQ=0.9126;ERATE=0.0004;THETA=0.0006;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 2276586 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.361;LDAF=0.0016;AVGPOST=0.9975;RSQ=0.3465;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2276587 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.974;LDAF=0.1442;AVGPOST=0.9912;RSQ=0.9746;ERATE=0.0005;THETA=0.0008;AC=316;AN=2184 GT:DS:GL:BD 0.14468865 0
1 2276761 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.959;LDAF=0.0181;AVGPOST=0.9979;RSQ=0.9483;ERATE=0.0003;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 2276803 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0214;AVGPOST=0.9979;RSQ=0.9605;ERATE=0.0004;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 2276881 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1251;AVGPOST=0.9981;RSQ=0.9945;ERATE=0.0003;THETA=0.0009;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 2276911 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.749;LDAF=0.0028;AVGPOST=0.9973;RSQ=0.6415;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2276941 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.644;LDAF=0.0051;AVGPOST=0.9974;RSQ=0.7878;ERATE=0.0005;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2276956 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.718;LDAF=0.0030;AVGPOST=0.9963;RSQ=0.5556;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2276996 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.980;LDAF=0.1902;AVGPOST=0.9927;RSQ=0.9833;ERATE=0.0005;THETA=0.0011;AC=416;AN=2184 GT:DS:GL:BD 0.19047619 0
1 2277001 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.785;LDAF=0.0130;AVGPOST=0.9943;RSQ=0.8375;ERATE=0.0003;THETA=0.0007;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 2277102 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0384;AVGPOST=0.9995;RSQ=0.9936;ERATE=0.0004;THETA=0.0004;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 2277166 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1662;AVGPOST=0.9983;RSQ=0.9952;ERATE=0.0004;THETA=0.0012;AC=363;AN=2184 GT:DS:GL:BD 0.16620879 0
1 2277197 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5445;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2277213 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2035;AVGPOST=0.9984;RSQ=0.9956;ERATE=0.0006;THETA=0.0002;AC=445;AN=2184 GT:DS:GL:BD 0.20375457 0
1 2277288 . ACACACAG A 27116 PASS INDEL;BAVGPOST=0.968;BRSQ=0.898;LDAF=0.1879;AVGPOST=0.9588;RSQ=0.9011;ERATE=0.0074;THETA=0.0005;AC=400;AN=2184 GT:DS:GL:BD 0.18315019 0
1 2277330 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2277389 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.592;LDAF=0.0032;AVGPOST=0.9972;RSQ=0.6384;ERATE=0.0008;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2277392 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1272;AVGPOST=0.9966;RSQ=0.9904;ERATE=0.0005;THETA=0.0002;AC=277;AN=2184 GT:DS:GL:BD 0.12683150 0
1 2277406 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2277483 . A AG 994 PASS INDEL;BAVGPOST=0.961;BRSQ=0.449;LDAF=0.0622;AVGPOST=0.9228;RSQ=0.4776;ERATE=0.0094;THETA=0.0003;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 2277550 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.934;BRSQ=0.873;LDAF=0.5624;AVGPOST=0.8797;RSQ=0.8136;ERATE=0.0316;THETA=0.0042;AC=1254;AN=2184 GT:DS:GL:BD 0.57417583 1
1 2277671 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0376;AVGPOST=0.9997;RSQ=0.9964;ERATE=0.0003;THETA=0.0003;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 2277696 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0380;AVGPOST=0.9987;RSQ=0.9846;ERATE=0.0004;THETA=0.0002;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 2277706 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.842;LDAF=0.0311;AVGPOST=0.9920;RSQ=0.9048;ERATE=0.0004;THETA=0.0004;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 2277715 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0038;AVGPOST=0.9969;RSQ=0.6813;ERATE=0.0006;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2277716 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.796;LDAF=0.0088;AVGPOST=0.9987;RSQ=0.9293;ERATE=0.0005;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2277827 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.8455;AVGPOST=0.9977;RSQ=0.9922;ERATE=0.0006;THETA=0.0005;AC=1850;AN=2184 GT:DS:GL:BD 0.84706962 1
1 2278115 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.980;LDAF=0.2004;AVGPOST=0.9923;RSQ=0.9813;ERATE=0.0004;THETA=0.0038;AC=437;AN=2184 GT:DS:GL:BD 0.20009157 0
1 2278117 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.598;LDAF=0.0034;AVGPOST=0.9966;RSQ=0.6180;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2278178 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7326;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2278229 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.939;LDAF=0.0380;AVGPOST=0.9987;RSQ=0.9871;ERATE=0.0003;THETA=0.0003;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 2278240 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4971;AVGPOST=0.9920;RSQ=0.9890;ERATE=0.0008;THETA=0.0004;AC=1086;AN=2184 GT:DS:GL:BD 0.49725273 0
1 2278256 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.642;LDAF=0.0121;AVGPOST=0.9890;RSQ=0.6734;ERATE=0.0004;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2278293 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0387;AVGPOST=0.9973;RSQ=0.9758;ERATE=0.0004;THETA=0.0003;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 2278294 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0385;AVGPOST=0.9978;RSQ=0.9745;ERATE=0.0004;THETA=0.0002;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 2278539 . C CA 61 PASS INDEL;BAVGPOST=0.999;BRSQ=0.585;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6265;ERATE=0.0006;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2278587 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.671;LDAF=0.0038;AVGPOST=0.9980;RSQ=0.7639;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2278648 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.978;LDAF=0.8320;AVGPOST=0.9884;RSQ=0.9690;ERATE=0.0007;THETA=0.0004;AC=1816;AN=2184 GT:DS:GL:BD 0.83150184 1
1 2278651 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.969;LDAF=0.1425;AVGPOST=0.9902;RSQ=0.9716;ERATE=0.0011;THETA=0.0003;AC=313;AN=2184 GT:DS:GL:BD 0.14331502 0
1 2278700 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.777;LDAF=0.0016;AVGPOST=0.9976;RSQ=0.4900;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2278841 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0070;AVGPOST=0.9959;RSQ=0.7682;ERATE=0.0009;THETA=0.0001;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2278919 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.913;LDAF=0.0125;AVGPOST=0.9956;RSQ=0.8735;ERATE=0.0004;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 2278981 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.985;LDAF=0.6067;AVGPOST=0.9830;RSQ=0.9728;ERATE=0.0040;THETA=0.0022;AC=1326;AN=2184 GT:DS:GL:BD 0.60714287 1
1 2279120 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0170;AVGPOST=0.9977;RSQ=0.9456;ERATE=0.0005;THETA=0.0011;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 2279376 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.833;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8829;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2279377 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6578;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2279406 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8463;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2279414 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7639;ERATE=0.0004;THETA=0.0043;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2279434 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.966;LDAF=0.1751;AVGPOST=0.9857;RSQ=0.9663;ERATE=0.0012;THETA=0.0005;AC=377;AN=2184 GT:DS:GL:BD 0.17261904 0
1 2279563 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0217;AVGPOST=0.9992;RSQ=0.9834;ERATE=0.0003;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 2279596 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.703;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6737;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2279648 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.764;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6134;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2279703 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2279752 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0111;AVGPOST=0.9988;RSQ=0.9655;ERATE=0.0003;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 2279765 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0113;AVGPOST=0.9983;RSQ=0.9493;ERATE=0.0003;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 2279779 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0151;AVGPOST=0.9930;RSQ=0.8358;ERATE=0.0008;THETA=0.0010;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 2279817 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.2914;AVGPOST=0.9966;RSQ=0.9942;ERATE=0.0004;THETA=0.0006;AC=637;AN=2184 GT:DS:GL:BD 0.29166666 0
1 2279832 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.978;LDAF=0.1175;AVGPOST=0.9943;RSQ=0.9803;ERATE=0.0006;THETA=0.0003;AC=256;AN=2184 GT:DS:GL:BD 0.11721612 0
1 2279879 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0130;AVGPOST=0.9984;RSQ=0.9476;ERATE=0.0004;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 2279892 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.695;LDAF=0.0022;AVGPOST=0.9964;RSQ=0.3686;ERATE=0.0007;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2279910 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0057;AVGPOST=0.9995;RSQ=0.9616;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2279951 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.694;LDAF=0.0140;AVGPOST=0.9920;RSQ=0.7739;ERATE=0.0004;THETA=0.0002;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 2279986 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.624;LDAF=0.0056;AVGPOST=0.9965;RSQ=0.7373;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2279993 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0085;AVGPOST=0.9975;RSQ=0.8705;ERATE=0.0007;THETA=0.0010;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2280019 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.749;LDAF=0.0032;AVGPOST=0.9977;RSQ=0.6808;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2280029 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.1335;AVGPOST=0.9972;RSQ=0.9925;ERATE=0.0003;THETA=0.0004;AC=292;AN=2184 GT:DS:GL:BD 0.13369964 0
1 2280136 . GCACGCA G 1147 PASS INDEL;BAVGPOST=0.992;BRSQ=0.770;LDAF=0.0212;AVGPOST=0.9872;RSQ=0.7758;ERATE=0.0009;THETA=0.0003;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 2280164 . G GCACA 20506 PASS INDEL;BAVGPOST=0.603;BRSQ=0.292;LDAF=0.4886;AVGPOST=0.6589;RSQ=0.3751;ERATE=0.0838;THETA=0.0002;AC=1069;AN=2184 GT:DS:GL:BD 0.48946887 0
1 2280254 . GCACA G 356 PASS INDEL;BAVGPOST=0.997;BRSQ=0.868;LDAF=0.0215;AVGPOST=0.9847;RSQ=0.7094;ERATE=0.0032;THETA=0.0012;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 2280284 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.940;LDAF=0.0152;AVGPOST=0.9970;RSQ=0.9274;ERATE=0.0003;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 2280308 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.575;LDAF=0.0120;AVGPOST=0.9871;RSQ=0.5905;ERATE=0.0021;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2280385 . ACC A 3027 PASS INDEL;BAVGPOST=0.982;BRSQ=0.947;LDAF=0.1788;AVGPOST=0.9853;RSQ=0.9642;ERATE=0.0007;THETA=0.0003;AC=396;AN=2184 GT:DS:GL:BD 0.18131869 0
1 2280388 . CCT C 16191 PASS INDEL;BAVGPOST=0.981;BRSQ=0.948;LDAF=0.1795;AVGPOST=0.9890;RSQ=0.9740;ERATE=0.0003;THETA=0.0002;AC=396;AN=2184 GT:DS:GL:BD 0.18131869 0
1 2280423 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.8448;AVGPOST=0.9978;RSQ=0.9928;ERATE=0.0004;THETA=0.0005;AC=1847;AN=2184 GT:DS:GL:BD 0.84569597 1
1 2280559 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.846;LDAF=0.0025;AVGPOST=0.9992;RSQ=0.8456;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2280594 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9545;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2280600 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0051;AVGPOST=0.9976;RSQ=0.8311;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2280622 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0123;AVGPOST=0.9997;RSQ=0.9888;ERATE=0.0003;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 2280661 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.984;LDAF=0.4884;AVGPOST=0.9851;RSQ=0.9800;ERATE=0.0060;THETA=0.0003;AC=1069;AN=2184 GT:DS:GL:BD 0.48946887 0
1 2280686 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.850;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9443;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2280770 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0052;AVGPOST=0.9975;RSQ=0.8216;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2280859 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6540;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2281040 . GCT G 64 PASS INDEL;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0028;AVGPOST=0.9957;RSQ=0.3447;ERATE=0.0006;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2281137 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0026;AVGPOST=0.9979;RSQ=0.7240;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2281166 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.749;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7163;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2281328 . T TG 345 PASS INDEL;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0070;AVGPOST=0.9981;RSQ=0.8994;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2281347 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0354;AVGPOST=0.9994;RSQ=0.9921;ERATE=0.0003;THETA=0.0003;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 2281360 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4524;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2281375 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0022;AVGPOST=0.9987;RSQ=0.7737;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2281377 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0020;AVGPOST=0.9977;RSQ=0.5618;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2281423 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.540;LDAF=0.0047;AVGPOST=0.9921;RSQ=0.3048;ERATE=0.0018;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2281529 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.844;LDAF=0.0033;AVGPOST=0.9973;RSQ=0.6990;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2281622 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.4958;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2281646 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0006;AVGPOST=0.9989;RSQ=0.3863;ERATE=0.0003;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 2281724 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.5285;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2281726 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2022;AVGPOST=0.9972;RSQ=0.9932;ERATE=0.0005;THETA=0.0002;AC=444;AN=2184 GT:DS:GL:BD 0.20329671 0
1 2281978 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.5402;AVGPOST=0.9900;RSQ=0.9849;ERATE=0.0021;THETA=0.0003;AC=1183;AN=2184 GT:DS:GL:BD 0.54166669 1
1 2281979 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.968;LDAF=0.1867;AVGPOST=0.9956;RSQ=0.9889;ERATE=0.0005;THETA=0.0003;AC=410;AN=2184 GT:DS:GL:BD 0.18772894 0
1 2282017 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0059;AVGPOST=0.9984;RSQ=0.8784;ERATE=0.0005;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2282134 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2282135 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.2940;AVGPOST=0.9916;RSQ=0.9861;ERATE=0.0012;THETA=0.0006;AC=641;AN=2184 GT:DS:GL:BD 0.29349816 0
1 2282166 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0070;AVGPOST=0.9974;RSQ=0.8575;ERATE=0.0004;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 2282189 . AGGGGTGGCACG A 13805 PASS INDEL;BAVGPOST=0.961;BRSQ=0.863;LDAF=0.1590;AVGPOST=0.9735;RSQ=0.9276;ERATE=0.0022;THETA=0.0003;AC=343;AN=2184 GT:DS:GL:BD 0.15705128 0
1 2282204 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.945;LDAF=0.0452;AVGPOST=0.9932;RSQ=0.9404;ERATE=0.0007;THETA=0.0002;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 2282244 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0082;AVGPOST=0.9991;RSQ=0.9492;ERATE=0.0005;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2282245 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6878;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2282276 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0028;AVGPOST=0.9987;RSQ=0.8112;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2282371 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.770;LDAF=0.0091;AVGPOST=0.9957;RSQ=0.8536;ERATE=0.0004;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2282373 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.983;LDAF=0.1635;AVGPOST=0.9974;RSQ=0.9929;ERATE=0.0004;THETA=0.0003;AC=358;AN=2184 GT:DS:GL:BD 0.16391942 0
1 2282382 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1843;AVGPOST=0.9973;RSQ=0.9940;ERATE=0.0004;THETA=0.0003;AC=400;AN=2184 GT:DS:GL:BD 0.18315019 0
1 2282401 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0371;AVGPOST=0.9977;RSQ=0.9745;ERATE=0.0004;THETA=0.0029;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 2282403 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4932;ERATE=0.0005;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2282445 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2282654 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.988;LDAF=0.1068;AVGPOST=0.9955;RSQ=0.9850;ERATE=0.0004;THETA=0.0004;AC=230;AN=2184 GT:DS:GL:BD 0.10531136 0
1 2282680 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3088;AVGPOST=0.9969;RSQ=0.9947;ERATE=0.0004;THETA=0.0006;AC=674;AN=2184 GT:DS:GL:BD 0.30860806 0
1 2282690 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.930;LDAF=0.0104;AVGPOST=0.9952;RSQ=0.8295;ERATE=0.0007;THETA=0.0020;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 2282716 rs35424701 T TA 10006 PASS INDEL;BAVGPOST=0.980;BRSQ=0.878;LDAF=0.0814;AVGPOST=0.9876;RSQ=0.9443;ERATE=0.0003;THETA=0.0016;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 2282776 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.8435;AVGPOST=0.9964;RSQ=0.9881;ERATE=0.0012;THETA=0.0002;AC=1846;AN=2184 GT:DS:GL:BD 0.84523809 1
1 2282990 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.1595;AVGPOST=0.9981;RSQ=0.9948;ERATE=0.0003;THETA=0.0002;AC=350;AN=2184 GT:DS:GL:BD 0.16025642 0
1 2282998 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7456;ERATE=0.0006;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2283053 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9356;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2283117 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1079;AVGPOST=0.9999;RSQ=0.9994;ERATE=0.0024;THETA=0.0009;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 2283161 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2794;AVGPOST=0.9992;RSQ=0.9985;ERATE=0.0091;THETA=0.0002;AC=609;AN=2184 GT:DS:GL:BD 0.27884614 0
1 2283208 . AG A 1692 PASS INDEL;BAVGPOST=0.998;BRSQ=0.931;LDAF=0.0141;AVGPOST=0.9966;RSQ=0.9009;ERATE=0.0008;THETA=0.0002;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2283216 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0048;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2283225 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9885;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2283266 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3327;AVGPOST=0.9989;RSQ=0.9982;ERATE=0.0089;THETA=0.0004;AC=726;AN=2184 GT:DS:GL:BD 0.33241758 0
1 2283313 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1845;AVGPOST=0.9994;RSQ=0.9987;ERATE=0.0010;THETA=0.0006;AC=402;AN=2184 GT:DS:GL:BD 0.18406594 0
1 2283410 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0036;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2283455 . T TAG 135 PASS INDEL;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2283464 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0043;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2283477 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.8144;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2283632 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.6113;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2283635 . AAAG A 120 PASS INDEL;BAVGPOST=0.999;BRSQ=0.739;LDAF=0.0032;AVGPOST=0.9970;RSQ=0.5978;ERATE=0.0009;THETA=0.0061;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2283664 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2283667 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.8026;ERATE=0.0003;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2283689 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9535;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2283709 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9282;ERATE=0.0003;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2283716 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2283743 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.675;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6684;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2283842 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.991;LDAF=0.5271;AVGPOST=0.9896;RSQ=0.9857;ERATE=0.0017;THETA=0.0004;AC=1150;AN=2184 GT:DS:GL:BD 0.52655679 1
1 2283844 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.922;LDAF=0.0718;AVGPOST=0.9901;RSQ=0.9483;ERATE=0.0004;THETA=0.0005;AC=153;AN=2184 GT:DS:GL:BD 0.07005495 0
1 2283896 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5299;AVGPOST=0.9975;RSQ=0.9962;ERATE=0.0007;THETA=0.0009;AC=1158;AN=2184 GT:DS:GL:BD 0.53021979 1
1 2283912 . AAGCACAT A 826 PASS INDEL;BAVGPOST=0.997;BRSQ=0.694;LDAF=0.0063;AVGPOST=0.9949;RSQ=0.7145;ERATE=0.0005;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2284003 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8448;AVGPOST=0.9989;RSQ=0.9964;ERATE=0.0004;THETA=0.0004;AC=1847;AN=2184 GT:DS:GL:BD 0.84569597 1
1 2284029 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0084;AVGPOST=0.9996;RSQ=0.9763;ERATE=0.0004;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2284167 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0247;AVGPOST=0.9990;RSQ=0.9829;ERATE=0.0004;THETA=0.0002;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 2284195 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.3235;AVGPOST=0.9929;RSQ=0.9886;ERATE=0.0014;THETA=0.0002;AC=707;AN=2184 GT:DS:GL:BD 0.32371795 0
1 2284226 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8439;ERATE=0.0008;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2284247 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.638;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.5093;ERATE=0.0004;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2284295 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7048;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2284486 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2096;AVGPOST=0.9913;RSQ=0.9809;ERATE=0.0013;THETA=0.0002;AC=454;AN=2184 GT:DS:GL:BD 0.20787546 0
1 2284508 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.695;LDAF=0.0146;AVGPOST=0.9953;RSQ=0.8744;ERATE=0.0004;THETA=0.0001;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2284531 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.748;LDAF=0.0024;AVGPOST=0.9970;RSQ=0.4767;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2284597 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.5696;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2284644 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9303;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2284815 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2284864 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.791;LDAF=0.0044;AVGPOST=0.9985;RSQ=0.8534;ERATE=0.0004;THETA=0.0024;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2284898 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5237;AVGPOST=0.9965;RSQ=0.9948;ERATE=0.0006;THETA=0.0002;AC=1143;AN=2184 GT:DS:GL:BD 0.52335167 1
1 2284993 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.6149;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2285065 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5642;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2285112 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7283;ERATE=0.0007;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2285182 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.987;LDAF=0.3425;AVGPOST=0.9938;RSQ=0.9915;ERATE=0.0006;THETA=0.0004;AC=745;AN=2184 GT:DS:GL:BD 0.34111720 0
1 2285292 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.908;LDAF=0.0068;AVGPOST=0.9990;RSQ=0.9452;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 2285380 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7530;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2285414 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8479;AVGPOST=0.9986;RSQ=0.9956;ERATE=0.0004;THETA=0.0003;AC=1854;AN=2184 GT:DS:GL:BD 0.84890109 1
1 2285445 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7109;ERATE=0.0010;THETA=0.0019;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2285453 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7708;ERATE=0.0009;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2285461 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0040;AVGPOST=0.9989;RSQ=0.8721;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2285581 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.761;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5120;ERATE=0.0005;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2285585 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5344;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2285590 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0015;AVGPOST=0.9982;RSQ=0.5220;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2285730 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1805;AVGPOST=0.9991;RSQ=0.9973;ERATE=0.0004;THETA=0.0003;AC=393;AN=2184 GT:DS:GL:BD 0.17994505 0
1 2285836 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0085;AVGPOST=0.9994;RSQ=0.9671;ERATE=0.0004;THETA=0.0014;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2286080 . G GCCA 48 PASS INDEL;BAVGPOST=0.997;BRSQ=0.598;LDAF=0.0081;AVGPOST=0.9940;RSQ=0.6898;ERATE=0.0008;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2286084 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1078;AVGPOST=0.9956;RSQ=0.9845;ERATE=0.0006;THETA=0.0003;AC=232;AN=2184 GT:DS:GL:BD 0.10622711 0
1 2286103 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.711;LDAF=0.0092;AVGPOST=0.9936;RSQ=0.7216;ERATE=0.0006;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2286127 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1084;AVGPOST=0.9949;RSQ=0.9825;ERATE=0.0006;THETA=0.0004;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 2286128 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.752;LDAF=0.0050;AVGPOST=0.9973;RSQ=0.7799;ERATE=0.0005;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2286164 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6697;ERATE=0.0008;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2286167 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.536;LDAF=0.0049;AVGPOST=0.9958;RSQ=0.6587;ERATE=0.0008;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2286215 . G GT 87 PASS INDEL;BAVGPOST=1.000;BRSQ=0.741;LDAF=0.0026;AVGPOST=0.9975;RSQ=0.6204;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2286264 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.881;LDAF=0.0094;AVGPOST=0.9982;RSQ=0.9162;ERATE=0.0005;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2286360 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6313;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2286408 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.1804;AVGPOST=0.9960;RSQ=0.9910;ERATE=0.0005;THETA=0.0003;AC=390;AN=2184 GT:DS:GL:BD 0.17857143 0
1 2286519 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.474;LDAF=0.0077;AVGPOST=0.9918;RSQ=0.5782;ERATE=0.0007;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2286528 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.516;LDAF=0.0014;AVGPOST=0.9979;RSQ=0.3959;ERATE=0.0006;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2286554 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.539;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7802;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2286657 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4968;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2286778 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.601;LDAF=0.0032;AVGPOST=0.9972;RSQ=0.6385;ERATE=0.0005;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2286831 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0024;AVGPOST=0.9973;RSQ=0.6054;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2286851 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0037;AVGPOST=0.9990;RSQ=0.8971;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2286920 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.982;LDAF=0.1149;AVGPOST=0.9930;RSQ=0.9776;ERATE=0.0005;THETA=0.0005;AC=249;AN=2184 GT:DS:GL:BD 0.11401099 0
1 2286947 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.8469;AVGPOST=0.9943;RSQ=0.9826;ERATE=0.0009;THETA=0.0003;AC=1852;AN=2184 GT:DS:GL:BD 0.84798533 1
1 2287110 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1803;AVGPOST=0.9982;RSQ=0.9951;ERATE=0.0004;THETA=0.0004;AC=391;AN=2184 GT:DS:GL:BD 0.17902930 0
1 2287127 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0170;AVGPOST=0.9922;RSQ=0.8180;ERATE=0.0010;THETA=0.0007;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 2287147 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0398;AVGPOST=0.9985;RSQ=0.9845;ERATE=0.0005;THETA=0.0007;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 2287365 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0088;AVGPOST=0.9968;RSQ=0.8557;ERATE=0.0003;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2287403 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.882;LDAF=0.0055;AVGPOST=0.9983;RSQ=0.8801;ERATE=0.0004;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2287417 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.811;LDAF=0.0110;AVGPOST=0.9948;RSQ=0.8369;ERATE=0.0004;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2287517 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.8433;AVGPOST=0.9971;RSQ=0.9918;ERATE=0.0006;THETA=0.0005;AC=1843;AN=2184 GT:DS:GL:BD 0.84386444 1
1 2287534 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1553;AVGPOST=0.9965;RSQ=0.9898;ERATE=0.0010;THETA=0.0004;AC=337;AN=2184 GT:DS:GL:BD 0.15430403 0
1 2287588 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.596;LDAF=0.0063;AVGPOST=0.9935;RSQ=0.5702;ERATE=0.0009;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2287597 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1818;AVGPOST=0.9969;RSQ=0.9926;ERATE=0.0005;THETA=0.0004;AC=393;AN=2184 GT:DS:GL:BD 0.17994505 0
1 2287616 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.5218;AVGPOST=0.9954;RSQ=0.9934;ERATE=0.0006;THETA=0.0001;AC=1140;AN=2184 GT:DS:GL:BD 0.52197802 1
1 2287688 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8116;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2287701 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0092;AVGPOST=0.9995;RSQ=0.9729;ERATE=0.0004;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2287707 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0035;AVGPOST=0.9992;RSQ=0.9136;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2287813 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.803;LDAF=0.0040;AVGPOST=0.9988;RSQ=0.8821;ERATE=0.0005;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2287848 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.3033;AVGPOST=0.9968;RSQ=0.9939;ERATE=0.0006;THETA=0.0002;AC=663;AN=2184 GT:DS:GL:BD 0.30357143 0
1 2287900 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0404;AVGPOST=0.9988;RSQ=0.9863;ERATE=0.0003;THETA=0.0014;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 2287912 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.753;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4391;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2288231 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0089;AVGPOST=0.9996;RSQ=0.9792;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 2288235 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=0.9988;RSQ=0.7414;ERATE=0.0008;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2288351 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6171;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2288397 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.734;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.5821;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2288405 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4056;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2288418 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7096;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2288493 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.789;LDAF=0.0279;AVGPOST=0.9751;RSQ=0.6463;ERATE=0.0025;THETA=0.0002;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 2288535 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.941;LDAF=0.2090;AVGPOST=0.9606;RSQ=0.9139;ERATE=0.0032;THETA=0.0001;AC=442;AN=2184 GT:DS:GL:BD 0.20238096 0
1 2288647 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0088;AVGPOST=0.9969;RSQ=0.8663;ERATE=0.0005;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2288650 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.623;LDAF=0.0037;AVGPOST=0.9954;RSQ=0.5068;ERATE=0.0006;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2288677 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.833;LDAF=0.0113;AVGPOST=0.9970;RSQ=0.8882;ERATE=0.0005;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 2288690 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8554;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2288747 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5349;AVGPOST=0.9962;RSQ=0.9942;ERATE=0.0006;THETA=0.0002;AC=1170;AN=2184 GT:DS:GL:BD 0.53571427 1
1 2288852 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1797;AVGPOST=0.9998;RSQ=0.9995;ERATE=0.0003;THETA=0.0004;AC=391;AN=2184 GT:DS:GL:BD 0.17902930 0
1 2288949 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0054;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2288959 . T TGCCCC 47 PASS INDEL;BAVGPOST=1.000;BRSQ=0.775;LDAF=0.0105;AVGPOST=0.9911;RSQ=0.6723;ERATE=0.0007;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 2289030 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2289082 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.656;LDAF=0.0102;AVGPOST=0.9919;RSQ=0.7068;ERATE=0.0085;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 2289085 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9904;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2289183 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2289247 rs34957560 T TG 5729 PASS INDEL;BAVGPOST=0.972;BRSQ=0.911;LDAF=0.1796;AVGPOST=0.9765;RSQ=0.9460;ERATE=0.0010;THETA=0.0003;AC=396;AN=2184 GT:DS:GL:BD 0.18131869 0
1 2289250 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.951;LDAF=0.1819;AVGPOST=0.9849;RSQ=0.9666;ERATE=0.0003;THETA=0.0004;AC=398;AN=2184 GT:DS:GL:BD 0.18223444 0
1 2289250 rs34209364 CT C 3091 PASS INDEL;BAVGPOST=0.971;BRSQ=0.911;LDAF=0.1790;AVGPOST=0.9793;RSQ=0.9543;ERATE=0.0005;THETA=0.0002;AC=393;AN=2184 GT:DS:GL:BD 0.17994505 0
1 2289251 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.951;LDAF=0.1822;AVGPOST=0.9851;RSQ=0.9671;ERATE=0.0003;THETA=0.0009;AC=398;AN=2184 GT:DS:GL:BD 0.18223444 0
1 2289295 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0046;AVGPOST=0.9991;RSQ=0.9132;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2289304 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8171;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2289321 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1549;AVGPOST=0.9988;RSQ=0.9963;ERATE=0.0004;THETA=0.0002;AC=339;AN=2184 GT:DS:GL:BD 0.15521978 0
1 2289339 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0092;AVGPOST=0.9981;RSQ=0.9247;ERATE=0.0004;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 2289376 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.770;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6836;ERATE=0.0006;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2289480 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1787;AVGPOST=0.9996;RSQ=0.9988;ERATE=0.0003;THETA=0.0003;AC=389;AN=2184 GT:DS:GL:BD 0.17811355 0
1 2289729 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.778;LDAF=0.0043;AVGPOST=0.9990;RSQ=0.8989;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2289757 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.731;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7815;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2289812 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.987;LDAF=0.2602;AVGPOST=0.9941;RSQ=0.9890;ERATE=0.0006;THETA=0.0002;AC=568;AN=2184 GT:DS:GL:BD 0.26007327 0
1 2289824 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0090;AVGPOST=0.9993;RSQ=0.9671;ERATE=0.0003;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 2290026 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2290143 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0051;AVGPOST=1.0000;RSQ=0.9957;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2290146 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2290255 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.879;LDAF=0.0142;AVGPOST=0.9982;RSQ=0.9441;ERATE=0.0004;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 2290256 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1789;AVGPOST=0.9990;RSQ=0.9972;ERATE=0.0004;THETA=0.0041;AC=389;AN=2184 GT:DS:GL:BD 0.17811355 0
1 2290288 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5299;AVGPOST=0.9989;RSQ=0.9983;ERATE=0.0005;THETA=0.0005;AC=1158;AN=2184 GT:DS:GL:BD 0.53021979 1
1 2290336 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.825;LDAF=0.0077;AVGPOST=0.9973;RSQ=0.8710;ERATE=0.0004;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 2290455 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0093;AVGPOST=0.9997;RSQ=0.9834;ERATE=0.0003;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2290456 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.963;LDAF=0.0551;AVGPOST=0.9971;RSQ=0.9794;ERATE=0.0005;THETA=0.0003;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 2290588 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.3951;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2290594 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.764;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5107;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2290621 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0403;AVGPOST=0.9989;RSQ=0.9885;ERATE=0.0003;THETA=0.0001;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 2290658 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1146;AVGPOST=0.9978;RSQ=0.9927;ERATE=0.0004;THETA=0.0003;AC=249;AN=2184 GT:DS:GL:BD 0.11401099 0
1 2290660 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8429;AVGPOST=0.9976;RSQ=0.9926;ERATE=0.0005;THETA=0.0002;AC=1844;AN=2184 GT:DS:GL:BD 0.84432232 1
1 2290669 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0057;AVGPOST=0.9983;RSQ=0.8906;ERATE=0.0004;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2290890 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.8434;AVGPOST=0.9989;RSQ=0.9966;ERATE=0.0004;THETA=0.0002;AC=1844;AN=2184 GT:DS:GL:BD 0.84432232 1
1 2290911 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.3535;AVGPOST=0.9936;RSQ=0.9901;ERATE=0.0006;THETA=0.0005;AC=770;AN=2184 GT:DS:GL:BD 0.35256410 0
1 2291058 . AC A 66 PASS INDEL;BAVGPOST=1.000;BRSQ=0.697;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4751;ERATE=0.0004;THETA=0.0051;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2291088 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.777;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4979;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2291093 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.510;LDAF=0.0104;AVGPOST=0.9869;RSQ=0.5008;ERATE=0.0035;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2291155 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.975;LDAF=0.0595;AVGPOST=0.9992;RSQ=0.9945;ERATE=0.0004;THETA=0.0003;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 2291253 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0108;AVGPOST=0.9979;RSQ=0.9198;ERATE=0.0005;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 2291267 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.1979;AVGPOST=0.9952;RSQ=0.9880;ERATE=0.0006;THETA=0.0004;AC=432;AN=2184 GT:DS:GL:BD 0.19780220 0
1 2291276 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.795;LDAF=0.0042;AVGPOST=0.9983;RSQ=0.8180;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2291389 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.546;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.6311;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2291449 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.745;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4450;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2291514 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0411;AVGPOST=0.9982;RSQ=0.9822;ERATE=0.0006;THETA=0.0002;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 2291534 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0021;AVGPOST=0.9982;RSQ=0.6497;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2291594 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2291595 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4659;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2291680 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8439;AVGPOST=0.9992;RSQ=0.9973;ERATE=0.0005;THETA=0.0006;AC=1845;AN=2184 GT:DS:GL:BD 0.84478021 1
1 2291682 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7343;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2291757 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9756;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2291795 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0128;AVGPOST=0.9990;RSQ=0.9624;ERATE=0.0004;THETA=0.0002;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 2291998 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7199;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2292069 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7434;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2292115 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0030;AVGPOST=0.9967;RSQ=0.5752;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2292155 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5289;AVGPOST=0.9986;RSQ=0.9976;ERATE=0.0006;THETA=0.0002;AC=1156;AN=2184 GT:DS:GL:BD 0.52930403 1
1 2292352 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3340;AVGPOST=0.9973;RSQ=0.9955;ERATE=0.0006;THETA=0.0002;AC=729;AN=2184 GT:DS:GL:BD 0.33379120 0
1 2292409 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5295;AVGPOST=0.9967;RSQ=0.9947;ERATE=0.0009;THETA=0.0008;AC=1158;AN=2184 GT:DS:GL:BD 0.53021979 1
1 2292410 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0077;AVGPOST=0.9980;RSQ=0.9157;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 2292554 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0093;AVGPOST=0.9995;RSQ=0.9757;ERATE=0.0003;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2292593 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6607;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2292650 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0008;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2292653 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.898;LDAF=0.0364;AVGPOST=0.9941;RSQ=0.9410;ERATE=0.0003;THETA=0.0002;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 2292688 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1787;AVGPOST=0.9989;RSQ=0.9970;ERATE=0.0004;THETA=0.0005;AC=389;AN=2184 GT:DS:GL:BD 0.17811355 0
1 2292737 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0027;AVGPOST=0.9984;RSQ=0.7348;ERATE=0.0005;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2292771 rs59328016 A AG 38390 PASS INDEL;BAVGPOST=0.988;BRSQ=0.979;LDAF=0.5260;AVGPOST=0.9829;RSQ=0.9751;ERATE=0.0022;THETA=0.0007;AC=1158;AN=2184 GT:DS:GL:BD 0.53021979 1
1 2292825 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.601;LDAF=0.0206;AVGPOST=0.9764;RSQ=0.5587;ERATE=0.0051;THETA=0.0002;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 2292841 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0040;AVGPOST=0.9968;RSQ=0.7369;ERATE=0.0004;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2292861 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.686;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5256;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2292894 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.746;LDAF=0.0013;AVGPOST=0.9981;RSQ=0.3958;ERATE=0.0004;THETA=0.0040;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2293024 . G GA 576 PASS INDEL;BAVGPOST=0.998;BRSQ=0.870;LDAF=0.0072;AVGPOST=0.9977;RSQ=0.8748;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2293049 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0003;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2293069 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0607;AVGPOST=0.9992;RSQ=0.9949;ERATE=0.0003;THETA=0.0003;AC=133;AN=2184 GT:DS:GL:BD 0.06089744 0
1 2293136 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.824;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9022;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2293166 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.984;LDAF=0.8355;AVGPOST=0.9808;RSQ=0.9470;ERATE=0.0032;THETA=0.0012;AC=1831;AN=2184 GT:DS:GL:BD 0.83836997 1
1 2293322 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.6413;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2293596 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.429;LDAF=0.0047;AVGPOST=0.9942;RSQ=0.5526;ERATE=0.0005;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2293657 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.5217;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2293668 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1055;AVGPOST=0.9977;RSQ=0.9924;ERATE=0.0003;THETA=0.0005;AC=231;AN=2184 GT:DS:GL:BD 0.10576923 0
1 2293724 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0592;AVGPOST=0.9987;RSQ=0.9924;ERATE=0.0003;THETA=0.0003;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 2293764 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0056;AVGPOST=0.9989;RSQ=0.9116;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2293791 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0388;AVGPOST=0.9991;RSQ=0.9907;ERATE=0.0004;THETA=0.0004;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 2294157 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.2915;AVGPOST=0.9961;RSQ=0.9924;ERATE=0.0005;THETA=0.0005;AC=638;AN=2184 GT:DS:GL:BD 0.29212454 0
1 2294259 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0133;AVGPOST=0.9977;RSQ=0.9194;ERATE=0.0004;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 2294349 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.870;LDAF=0.0053;AVGPOST=0.9991;RSQ=0.9181;ERATE=0.0009;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2294448 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.867;LDAF=0.0031;AVGPOST=0.9995;RSQ=0.9364;ERATE=0.0003;THETA=0.0048;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2294662 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.800;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6178;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2294844 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3363;AVGPOST=0.9973;RSQ=0.9959;ERATE=0.0004;THETA=0.0012;AC=735;AN=2184 GT:DS:GL:BD 0.33653846 0
1 2295030 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.960;LDAF=0.1977;AVGPOST=0.9938;RSQ=0.9862;ERATE=0.0004;THETA=0.0015;AC=434;AN=2184 GT:DS:GL:BD 0.19871795 0
1 2295062 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.852;LDAF=0.0190;AVGPOST=0.9924;RSQ=0.8482;ERATE=0.0003;THETA=0.0018;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 2295251 . AT A 5181 PASS INDEL;BAVGPOST=0.758;BRSQ=0.542;LDAF=0.4016;AVGPOST=0.7051;RSQ=0.4905;ERATE=0.0623;THETA=0.0006;AC=785;AN=2184 GT:DS:GL:BD 0.35943222 0
1 2295252 . T TAAA 9022 PASS INDEL;BAVGPOST=0.709;BRSQ=0.515;LDAF=0.5029;AVGPOST=0.7228;RSQ=0.5496;ERATE=0.0524;THETA=0.0027;AC=1097;AN=2184 GT:DS:GL:BD 0.50228935 1
1 2295266 rs59002493 A AT 392 PASS INDEL;BAVGPOST=0.932;BRSQ=0.481;LDAF=0.0724;AVGPOST=0.9521;RSQ=0.7442;ERATE=0.0006;THETA=0.0003;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 2295267 . A AT 379 PASS INDEL;BAVGPOST=0.932;BRSQ=0.483;LDAF=0.0707;AVGPOST=0.9504;RSQ=0.7351;ERATE=0.0006;THETA=0.0005;AC=129;AN=2184 GT:DS:GL:BD 0.05906593 0
1 2295408 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.788;LDAF=0.0025;AVGPOST=0.9993;RSQ=0.8675;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2295461 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9385;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2295478 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.526;LDAF=0.0017;AVGPOST=0.9982;RSQ=0.5403;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2295558 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.931;LDAF=0.0174;AVGPOST=0.9950;RSQ=0.9017;ERATE=0.0004;THETA=0.0005;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 2295778 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.940;LDAF=0.3141;AVGPOST=0.9792;RSQ=0.9629;ERATE=0.0080;THETA=0.0009;AC=689;AN=2184 GT:DS:GL:BD 0.31547618 0
1 2295861 . T TTC 1813 PASS INDEL;BAVGPOST=0.809;BRSQ=0.186;LDAF=0.2019;AVGPOST=0.7462;RSQ=0.3698;ERATE=0.0207;THETA=0.0017;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 2295924 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.610;BRSQ=0.441;LDAF=0.3974;AVGPOST=0.7511;RSQ=0.6118;ERATE=0.0124;THETA=0.0003;AC=829;AN=2184 GT:DS:GL:BD 0.37957877 0
1 2295929 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.692;BRSQ=0.392;LDAF=0.3549;AVGPOST=0.7478;RSQ=0.5558;ERATE=0.0186;THETA=0.0013;AC=675;AN=2184 GT:DS:GL:BD 0.30906594 0
1 2295937 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.697;BRSQ=0.390;LDAF=0.3406;AVGPOST=0.7559;RSQ=0.5509;ERATE=0.0160;THETA=0.0007;AC=654;AN=2184 GT:DS:GL:BD 0.29945055 0
1 2295938 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.840;BRSQ=0.501;LDAF=0.1679;AVGPOST=0.8699;RSQ=0.6445;ERATE=0.0075;THETA=0.0002;AC=313;AN=2184 GT:DS:GL:BD 0.14331502 0
1 2295945 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.665;BRSQ=0.486;LDAF=0.4567;AVGPOST=0.7068;RSQ=0.5273;ERATE=0.0416;THETA=0.0005;AC=994;AN=2184 GT:DS:GL:BD 0.45512819 0
1 2296047 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.962;LDAF=0.1169;AVGPOST=0.9929;RSQ=0.9763;ERATE=0.0007;THETA=0.0010;AC=256;AN=2184 GT:DS:GL:BD 0.11721612 0
1 2296096 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.828;BRSQ=0.274;LDAF=0.1603;AVGPOST=0.8227;RSQ=0.5029;ERATE=0.0113;THETA=0.0004;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 2296097 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.831;BRSQ=0.274;LDAF=0.1436;AVGPOST=0.8474;RSQ=0.5300;ERATE=0.0076;THETA=0.0007;AC=216;AN=2184 GT:DS:GL:BD 0.09890110 0
1 2296344 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.718;LDAF=0.0062;AVGPOST=0.9951;RSQ=0.6833;ERATE=0.0006;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2296822 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.706;BRSQ=0.470;LDAF=0.6388;AVGPOST=0.7345;RSQ=0.5640;ERATE=0.0245;THETA=0.0006;AC=1514;AN=2184 GT:DS:GL:BD 0.69322342 1
1 2297751 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.943;LDAF=0.1929;AVGPOST=0.9796;RSQ=0.9509;ERATE=0.0012;THETA=0.0001;AC=414;AN=2184 GT:DS:GL:BD 0.18956044 0
1 2297805 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.729;LDAF=0.0040;AVGPOST=0.9978;RSQ=0.7853;ERATE=0.0005;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2297864 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0029;AVGPOST=0.9969;RSQ=0.6171;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2297927 . TA T 2302 PASS INDEL;BAVGPOST=0.989;BRSQ=0.896;LDAF=0.0506;AVGPOST=0.9806;RSQ=0.8622;ERATE=0.0021;THETA=0.0007;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 2297935 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.994;LDAF=0.3146;AVGPOST=0.9932;RSQ=0.9882;ERATE=0.0012;THETA=0.0005;AC=688;AN=2184 GT:DS:GL:BD 0.31501833 0
1 2297994 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.3210;AVGPOST=0.9971;RSQ=0.9951;ERATE=0.0004;THETA=0.0005;AC=702;AN=2184 GT:DS:GL:BD 0.32142857 0
1 2298034 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.680;LDAF=0.0105;AVGPOST=0.9939;RSQ=0.7765;ERATE=0.0004;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2298070 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.628;LDAF=0.0054;AVGPOST=0.9943;RSQ=0.5829;ERATE=0.0007;THETA=0.0022;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2298255 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3242;AVGPOST=0.9968;RSQ=0.9948;ERATE=0.0004;THETA=0.0005;AC=711;AN=2184 GT:DS:GL:BD 0.32554945 0
1 2298258 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7066;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2298289 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7759;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2298395 rs56670882 CAAAATACATAGA C 27674 PASS INDEL;BAVGPOST=0.983;BRSQ=0.963;LDAF=0.3794;AVGPOST=0.9636;RSQ=0.9388;ERATE=0.0051;THETA=0.0004;AC=825;AN=2184 GT:DS:GL:BD 0.37774727 0
1 2298448 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.773;LDAF=0.0038;AVGPOST=0.9993;RSQ=0.9238;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2298494 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1878;AVGPOST=0.9963;RSQ=0.9910;ERATE=0.0005;THETA=0.0003;AC=410;AN=2184 GT:DS:GL:BD 0.18772894 0
1 2298534 . TCTC T 506 PASS INDEL;BAVGPOST=0.998;BRSQ=0.836;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9402;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2298558 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6688;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2298564 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6159;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2298636 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.3131;AVGPOST=0.9956;RSQ=0.9928;ERATE=0.0005;THETA=0.0003;AC=685;AN=2184 GT:DS:GL:BD 0.31364468 0
1 2298654 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.886;LDAF=0.0095;AVGPOST=0.9973;RSQ=0.8851;ERATE=0.0004;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 2298979 . AC A 1182 PASS INDEL;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0111;AVGPOST=0.9975;RSQ=0.9090;ERATE=0.0004;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 2299044 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.599;LDAF=0.0011;AVGPOST=0.9984;RSQ=0.4828;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2299048 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.880;LDAF=0.0041;AVGPOST=0.9974;RSQ=0.7540;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2299049 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7955;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2299059 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7796;ERATE=0.0010;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2299083 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.6743;AVGPOST=0.9955;RSQ=0.9925;ERATE=0.0005;THETA=0.0008;AC=1478;AN=2184 GT:DS:GL:BD 0.67673993 1
1 2299238 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.3142;AVGPOST=0.9957;RSQ=0.9915;ERATE=0.0008;THETA=0.0006;AC=686;AN=2184 GT:DS:GL:BD 0.31410256 0
1 2299310 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.935;BRSQ=0.809;LDAF=0.1701;AVGPOST=0.9563;RSQ=0.8918;ERATE=0.0013;THETA=0.0006;AC=374;AN=2184 GT:DS:GL:BD 0.17124543 0
1 2299311 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.932;BRSQ=0.870;LDAF=0.3404;AVGPOST=0.9606;RSQ=0.9343;ERATE=0.0009;THETA=0.0003;AC=753;AN=2184 GT:DS:GL:BD 0.34478021 0
1 2299347 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.886;LDAF=0.0959;AVGPOST=0.9933;RSQ=0.9717;ERATE=0.0005;THETA=0.0003;AC=210;AN=2184 GT:DS:GL:BD 0.09615385 0
1 2299357 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0059;AVGPOST=0.9929;RSQ=0.5309;ERATE=0.0014;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2299445 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6174;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2299462 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6919;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2299468 . AAAAG A 40 PASS INDEL;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5351;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2299548 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2299627 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3704;AVGPOST=0.9945;RSQ=0.9912;ERATE=0.0007;THETA=0.0004;AC=808;AN=2184 GT:DS:GL:BD 0.36996338 0
1 2299651 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.8538;AVGPOST=0.9964;RSQ=0.9888;ERATE=0.0003;THETA=0.0013;AC=1867;AN=2184 GT:DS:GL:BD 0.85485345 1
1 2299654 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.8986;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2299752 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.691;LDAF=0.0028;AVGPOST=0.9972;RSQ=0.5796;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2299894 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2299912 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.3920;AVGPOST=0.9950;RSQ=0.9920;ERATE=0.0010;THETA=0.0009;AC=858;AN=2184 GT:DS:GL:BD 0.39285713 0
1 2299959 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8165;ERATE=0.0006;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2299988 . T TC 21 PASS INDEL;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0031;AVGPOST=0.9978;RSQ=0.7082;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2300049 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2300053 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2300054 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2300081 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.890;LDAF=0.0019;AVGPOST=0.9996;RSQ=0.8978;ERATE=0.0003;THETA=0.0040;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2300085 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7143;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2300110 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2300129 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.855;LDAF=0.0041;AVGPOST=0.9986;RSQ=0.8493;ERATE=0.0004;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2300157 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.984;LDAF=0.3083;AVGPOST=0.9950;RSQ=0.9912;ERATE=0.0006;THETA=0.0020;AC=677;AN=2184 GT:DS:GL:BD 0.30998167 0
1 2300227 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5787;ERATE=0.0003;THETA=0.0044;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2300268 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.694;LDAF=0.0031;AVGPOST=0.9991;RSQ=0.8744;ERATE=0.0005;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2300378 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.943;BRSQ=0.895;LDAF=0.2967;AVGPOST=0.9708;RSQ=0.9497;ERATE=0.0006;THETA=0.0061;AC=657;AN=2184 GT:DS:GL:BD 0.30082417 0
1 2300401 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.3855;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2300420 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.752;LDAF=0.0034;AVGPOST=0.9970;RSQ=0.6408;ERATE=0.0005;THETA=0.0021;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2300557 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.961;LDAF=0.1106;AVGPOST=0.9921;RSQ=0.9695;ERATE=0.0003;THETA=0.0005;AC=240;AN=2184 GT:DS:GL:BD 0.10989011 0
1 2300626 rs113988166 T TA 8892 PASS INDEL;BAVGPOST=0.986;BRSQ=0.950;LDAF=0.1138;AVGPOST=0.9792;RSQ=0.9360;ERATE=0.0007;THETA=0.0087;AC=247;AN=2184 GT:DS:GL:BD 0.11309524 0
1 2300649 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.978;LDAF=0.3194;AVGPOST=0.9812;RSQ=0.9677;ERATE=0.0006;THETA=0.0073;AC=698;AN=2184 GT:DS:GL:BD 0.31959707 0
1 2300741 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.683;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.6866;ERATE=0.0006;THETA=0.0104;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2300761 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.707;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5964;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2300769 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.714;LDAF=0.0043;AVGPOST=0.9968;RSQ=0.7226;ERATE=0.0005;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2300775 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.950;LDAF=0.2002;AVGPOST=0.9833;RSQ=0.9627;ERATE=0.0005;THETA=0.0030;AC=442;AN=2184 GT:DS:GL:BD 0.20238096 0
1 2300815 . G GA 23 PASS INDEL;BAVGPOST=0.960;BRSQ=0.073;LDAF=0.1461;AVGPOST=0.7864;RSQ=0.3354;ERATE=0.0068;THETA=0.0136;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 2300835 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.617;LDAF=0.0025;AVGPOST=0.9967;RSQ=0.4570;ERATE=0.0007;THETA=0.0043;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2300843 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.623;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6115;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2300938 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0003;THETA=0.0050;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2300965 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.694;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.6909;ERATE=0.0004;THETA=0.0095;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2301007 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4175;ERATE=0.0003;THETA=0.0162;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2301125 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5341;ERATE=0.0005;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2301150 . AAAT A 5797 PASS INDEL;BAVGPOST=0.960;BRSQ=0.903;LDAF=0.2067;AVGPOST=0.9585;RSQ=0.9129;ERATE=0.0006;THETA=0.0011;AC=449;AN=2184 GT:DS:GL:BD 0.20558608 0
1 2301152 rs71578385 ATAAT A 25993 PASS INDEL;BAVGPOST=0.977;BRSQ=0.952;LDAF=0.2129;AVGPOST=0.9600;RSQ=0.9196;ERATE=0.0007;THETA=0.0119;AC=460;AN=2184 GT:DS:GL:BD 0.21062271 0
1 2301212 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.895;LDAF=0.0098;AVGPOST=0.9979;RSQ=0.9023;ERATE=0.0003;THETA=0.0181;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2301347 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0093;AVGPOST=0.9990;RSQ=0.9598;ERATE=0.0004;THETA=0.0106;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2301471 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.923;LDAF=0.1613;AVGPOST=0.9689;RSQ=0.9191;ERATE=0.0015;THETA=0.0169;AC=338;AN=2184 GT:DS:GL:BD 0.15476191 0
1 2301549 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0029;AVGPOST=0.9998;RSQ=0.9618;ERATE=0.0003;THETA=0.0257;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2301553 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0020;AVGPOST=0.9977;RSQ=0.5938;ERATE=0.0005;THETA=0.0186;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2301609 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.935;BRSQ=0.889;LDAF=0.3751;AVGPOST=0.9316;RSQ=0.8979;ERATE=0.0683;THETA=0.0085;AC=800;AN=2184 GT:DS:GL:BD 0.36630037 0
1 2301615 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.804;LDAF=0.0054;AVGPOST=0.9971;RSQ=0.7845;ERATE=0.0003;THETA=0.0154;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2301642 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0091;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2301677 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0026;AVGPOST=0.9987;RSQ=0.7910;ERATE=0.0003;THETA=0.0146;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2301690 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8198;ERATE=0.0003;THETA=0.0136;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2301691 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.956;BRSQ=0.889;LDAF=0.2073;AVGPOST=0.9532;RSQ=0.8968;ERATE=0.0452;THETA=0.0124;AC=437;AN=2184 GT:DS:GL:BD 0.20009157 0
1 2301727 . TC T 69 PASS INDEL;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0139;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2301732 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.819;LDAF=0.0043;AVGPOST=0.9973;RSQ=0.7473;ERATE=0.0006;THETA=0.0087;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2301803 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0054;AVGPOST=0.9989;RSQ=0.9090;ERATE=0.0004;THETA=0.0037;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2301887 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.6187;ERATE=0.0004;THETA=0.0170;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2301953 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.867;LDAF=0.0032;AVGPOST=0.9984;RSQ=0.8152;ERATE=0.0006;THETA=0.0108;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2301996 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0045;AVGPOST=0.9981;RSQ=0.8319;ERATE=0.0004;THETA=0.0223;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2302037 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6444;ERATE=0.0004;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2302049 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.758;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0003;THETA=0.0151;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2302172 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0017;AVGPOST=0.9974;RSQ=0.3807;ERATE=0.0006;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2302184 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0023;AVGPOST=0.9972;RSQ=0.4543;ERATE=0.0009;THETA=0.0134;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2302367 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.701;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.3452;ERATE=0.0006;THETA=0.0124;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2302373 . GGTGGCTCAC G 260 PASS INDEL;BAVGPOST=0.998;BRSQ=0.710;LDAF=0.0083;AVGPOST=0.9936;RSQ=0.6946;ERATE=0.0010;THETA=0.0207;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2302471 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.955;BRSQ=0.930;LDAF=0.5928;AVGPOST=0.9074;RSQ=0.8644;ERATE=0.0102;THETA=0.0038;AC=1318;AN=2184 GT:DS:GL:BD 0.60347986 1
1 2302480 rs58586536 T TA 1260 PASS INDEL;BAVGPOST=0.975;BRSQ=0.812;LDAF=0.0492;AVGPOST=0.9771;RSQ=0.8368;ERATE=0.0011;THETA=0.0015;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 2302516 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.968;LDAF=0.4899;AVGPOST=0.9571;RSQ=0.9408;ERATE=0.0019;THETA=0.0031;AC=1077;AN=2184 GT:DS:GL:BD 0.49313188 0
1 2302563 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.586;LDAF=0.0029;AVGPOST=0.9968;RSQ=0.5370;ERATE=0.0005;THETA=0.0036;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2302565 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.501;LDAF=0.0013;AVGPOST=0.9975;RSQ=0.1894;ERATE=0.0007;THETA=0.0007;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 2302602 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.737;LDAF=0.0044;AVGPOST=0.9975;RSQ=0.7504;ERATE=0.0004;THETA=0.0035;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2302603 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0028;AVGPOST=0.9975;RSQ=0.6156;ERATE=0.0007;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2302640 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.576;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4403;ERATE=0.0004;THETA=0.0038;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2302652 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4897;ERATE=0.0003;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2302656 . AACAACAACC A 2656 PASS INDEL;BAVGPOST=0.996;BRSQ=0.911;LDAF=0.0178;AVGPOST=0.9958;RSQ=0.9170;ERATE=0.0006;THETA=0.0017;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 2302682 . CAAG C 2234 PASS INDEL;BAVGPOST=0.997;BRSQ=0.932;LDAF=0.0157;AVGPOST=0.9972;RSQ=0.9362;ERATE=0.0005;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 2302716 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0158;AVGPOST=0.9987;RSQ=0.9706;ERATE=0.0004;THETA=0.0079;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 2302731 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0051;AVGPOST=0.9964;RSQ=0.7483;ERATE=0.0004;THETA=0.0048;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2302911 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.980;LDAF=0.2618;AVGPOST=0.9916;RSQ=0.9860;ERATE=0.0005;THETA=0.0010;AC=572;AN=2184 GT:DS:GL:BD 0.26190478 0
1 2303121 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.528;LDAF=0.0047;AVGPOST=0.9929;RSQ=0.4715;ERATE=0.0006;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2303271 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0037;AVGPOST=0.9952;RSQ=0.4745;ERATE=0.0006;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2303279 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0037;AVGPOST=0.9962;RSQ=0.6216;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2303283 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.714;LDAF=0.0030;AVGPOST=0.9971;RSQ=0.6546;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2303303 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0018;AVGPOST=0.9979;RSQ=0.5535;ERATE=0.0004;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2303371 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0051;AVGPOST=0.9985;RSQ=0.8821;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2303512 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.987;LDAF=0.1003;AVGPOST=0.9960;RSQ=0.9850;ERATE=0.0006;THETA=0.0002;AC=217;AN=2184 GT:DS:GL:BD 0.09935898 0
1 2303566 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.987;LDAF=0.1134;AVGPOST=0.9962;RSQ=0.9866;ERATE=0.0004;THETA=0.0022;AC=245;AN=2184 GT:DS:GL:BD 0.11217949 0
1 2303610 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.894;LDAF=0.0063;AVGPOST=0.9988;RSQ=0.9236;ERATE=0.0004;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2303611 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9663;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2303625 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0067;AVGPOST=0.9991;RSQ=0.9418;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2303628 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0018;AVGPOST=0.9998;RSQ=0.9558;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2303693 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.971;LDAF=0.0341;AVGPOST=0.9980;RSQ=0.9786;ERATE=0.0003;THETA=0.0004;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 2303719 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8472;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2303898 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9571;ERATE=0.0005;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2303963 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2303999 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8890;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2304000 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0066;AVGPOST=0.9996;RSQ=0.9725;ERATE=0.0003;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2304055 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2304120 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2304149 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0028;AVGPOST=0.9996;RSQ=0.9408;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2304176 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.673;LDAF=0.0032;AVGPOST=0.9977;RSQ=0.7248;ERATE=0.0005;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2304199 rs77724849 AC A 17320 PASS INDEL;BAVGPOST=0.980;BRSQ=0.968;LDAF=0.3235;AVGPOST=0.9858;RSQ=0.9791;ERATE=0.0018;THETA=0.0003;AC=703;AN=2184 GT:DS:GL:BD 0.32188645 0
1 2304201 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.975;LDAF=0.3266;AVGPOST=0.9876;RSQ=0.9819;ERATE=0.0022;THETA=0.0003;AC=714;AN=2184 GT:DS:GL:BD 0.32692307 0
1 2304254 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.801;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8389;ERATE=0.0003;THETA=0.0018;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2304315 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8515;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2304577 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.633;LDAF=0.0059;AVGPOST=0.9946;RSQ=0.6497;ERATE=0.0005;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2305070 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.5756;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2305217 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.7880;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2305251 . CCT C 21 PASS INDEL;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0029;AVGPOST=0.9973;RSQ=0.6495;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2305394 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0083;AVGPOST=0.9976;RSQ=0.8795;ERATE=0.0005;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2305456 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8937;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2305470 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.970;LDAF=0.0353;AVGPOST=0.9954;RSQ=0.9506;ERATE=0.0006;THETA=0.0007;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 2305717 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0017;AVGPOST=0.9997;RSQ=0.9311;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2305836 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9904;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2305854 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8182;ERATE=0.0003;THETA=0.0023;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2305862 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2305875 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0065;AVGPOST=0.9998;RSQ=0.9845;ERATE=0.0003;THETA=0.0010;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2305918 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2305932 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2305976 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2306011 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2306152 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4036;AVGPOST=0.9986;RSQ=0.9979;ERATE=0.0003;THETA=0.0004;AC=883;AN=2184 GT:DS:GL:BD 0.40430403 0
1 2306217 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2306255 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2306275 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9438;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2306302 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0084;AVGPOST=0.9988;RSQ=0.9408;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 2306389 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0031;AVGPOST=0.9984;RSQ=0.8108;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2306519 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0016;AVGPOST=0.9988;RSQ=0.7139;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2306662 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2306675 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.940;LDAF=0.0127;AVGPOST=0.9980;RSQ=0.9366;ERATE=0.0004;THETA=0.0011;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 2306695 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3870;AVGPOST=0.9948;RSQ=0.9916;ERATE=0.0012;THETA=0.0004;AC=847;AN=2184 GT:DS:GL:BD 0.38782051 0
1 2306831 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.875;LDAF=0.0186;AVGPOST=0.9956;RSQ=0.9083;ERATE=0.0004;THETA=0.0005;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 2306910 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0536;AVGPOST=0.9996;RSQ=0.9962;ERATE=0.0003;THETA=0.0006;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 2306972 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3028;AVGPOST=0.9957;RSQ=0.9937;ERATE=0.0004;THETA=0.0024;AC=664;AN=2184 GT:DS:GL:BD 0.30402932 0
1 2307011 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8734;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2307083 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0328;AVGPOST=0.9992;RSQ=0.9902;ERATE=0.0003;THETA=0.0005;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 2307105 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0265;AVGPOST=0.9979;RSQ=0.9656;ERATE=0.0007;THETA=0.0003;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 2307108 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6024;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2307260 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0161;AVGPOST=0.9979;RSQ=0.9410;ERATE=0.0003;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 2307309 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.781;LDAF=0.0029;AVGPOST=0.9970;RSQ=0.6031;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2307481 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0522;AVGPOST=0.9997;RSQ=0.9956;ERATE=0.0003;THETA=0.0004;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 2307501 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.918;LDAF=0.0117;AVGPOST=0.9979;RSQ=0.9286;ERATE=0.0004;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 2307531 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.611;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.5052;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2307569 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0533;AVGPOST=0.9976;RSQ=0.9812;ERATE=0.0004;THETA=0.0005;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 2307578 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.835;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6368;ERATE=0.0007;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2307603 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6872;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2307671 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0007;AVGPOST=0.9991;RSQ=0.4182;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2307678 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0248;AVGPOST=0.9998;RSQ=0.9965;ERATE=0.0003;THETA=0.0004;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 2307688 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.948;LDAF=0.0152;AVGPOST=0.9979;RSQ=0.9475;ERATE=0.0003;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 2307760 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0149;AVGPOST=0.9995;RSQ=0.9853;ERATE=0.0003;THETA=0.0006;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 2307796 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.753;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4407;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2307806 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6460;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2307816 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0018;AVGPOST=0.9975;RSQ=0.4159;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2307881 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0003;AVGPOST=0.9995;RSQ=0.0495;ERATE=0.0004;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 2307916 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.4717;AVGPOST=0.9923;RSQ=0.9895;ERATE=0.0008;THETA=0.0005;AC=1029;AN=2184 GT:DS:GL:BD 0.47115386 0
1 2307942 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6237;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2308011 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.600;LDAF=0.0027;AVGPOST=0.9964;RSQ=0.4739;ERATE=0.0005;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2308028 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0017;AVGPOST=0.9981;RSQ=0.5672;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2308029 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0918;AVGPOST=0.9964;RSQ=0.9824;ERATE=0.0004;THETA=0.0005;AC=201;AN=2184 GT:DS:GL:BD 0.09203297 0
1 2308061 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0024;AVGPOST=0.9974;RSQ=0.5957;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2308171 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.753;LDAF=0.0034;AVGPOST=0.9972;RSQ=0.6983;ERATE=0.0004;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2308180 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0081;AVGPOST=0.9970;RSQ=0.8539;ERATE=0.0005;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2308205 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9205;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2308224 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0749;AVGPOST=0.9976;RSQ=0.9876;ERATE=0.0003;THETA=0.0003;AC=163;AN=2184 GT:DS:GL:BD 0.07463370 0
1 2308327 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0039;AVGPOST=0.9986;RSQ=0.8743;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2308345 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2308405 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0057;AVGPOST=0.9992;RSQ=0.9384;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2308483 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.771;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4525;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2308495 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0024;AVGPOST=0.9984;RSQ=0.7431;ERATE=0.0008;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2308517 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.946;LDAF=0.9266;AVGPOST=0.9926;RSQ=0.9577;ERATE=0.0005;THETA=0.0005;AC=2024;AN=2184 GT:DS:GL:BD 0.92673993 1
1 2308528 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.796;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.7993;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2308587 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6415;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2308612 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0746;AVGPOST=0.9979;RSQ=0.9886;ERATE=0.0004;THETA=0.0002;AC=161;AN=2184 GT:DS:GL:BD 0.07371795 0
1 2308675 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5835;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2308684 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5823;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2308689 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6817;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2308763 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.821;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.7850;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2309008 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0081;AVGPOST=0.9994;RSQ=0.9678;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2309011 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2309026 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0161;AVGPOST=0.9995;RSQ=0.9892;ERATE=0.0003;THETA=0.0005;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 2309082 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.985;LDAF=0.4934;AVGPOST=0.9910;RSQ=0.9884;ERATE=0.0005;THETA=0.0003;AC=1081;AN=2184 GT:DS:GL:BD 0.49496338 0
1 2309087 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7290;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2309302 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8247;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2309314 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.732;LDAF=0.0026;AVGPOST=0.9985;RSQ=0.7772;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2309662 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0026;AVGPOST=0.9976;RSQ=0.6878;ERATE=0.0003;THETA=0.0022;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2309678 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.474;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5182;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2309784 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7946;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2309917 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.718;LDAF=0.0008;AVGPOST=0.9989;RSQ=0.4382;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2309982 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.679;LDAF=0.0030;AVGPOST=0.9983;RSQ=0.7623;ERATE=0.0005;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2310078 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.0691;AVGPOST=0.9989;RSQ=0.9917;ERATE=0.0004;THETA=0.0004;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 2310112 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.538;LDAF=0.0023;AVGPOST=0.9984;RSQ=0.7237;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2310193 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.0706;AVGPOST=0.9992;RSQ=0.9943;ERATE=0.0003;THETA=0.0005;AC=153;AN=2184 GT:DS:GL:BD 0.07005495 0
1 2310220 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.885;LDAF=0.0089;AVGPOST=0.9964;RSQ=0.8501;ERATE=0.0004;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2310221 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.883;LDAF=0.0090;AVGPOST=0.9963;RSQ=0.8540;ERATE=0.0003;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2310345 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.727;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6386;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2310429 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8540;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2310464 . A AT 76 PASS INDEL;BAVGPOST=0.974;BRSQ=0.520;LDAF=0.0334;AVGPOST=0.9668;RSQ=0.6206;ERATE=0.0047;THETA=0.0002;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 2310470 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0726;AVGPOST=0.9964;RSQ=0.9789;ERATE=0.0004;THETA=0.0003;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 2310508 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2310551 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9149;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2310553 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.729;LDAF=0.0018;AVGPOST=0.9987;RSQ=0.6614;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2310582 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.6071;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2310696 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.603;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4889;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2310697 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7568;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2310748 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.879;LDAF=0.0047;AVGPOST=0.9988;RSQ=0.8986;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2310753 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7079;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2310790 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0028;AVGPOST=0.9985;RSQ=0.7697;ERATE=0.0008;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2310797 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7234;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2310892 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0029;AVGPOST=0.9984;RSQ=0.7470;ERATE=0.0006;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2311052 . CAA C 63 PASS INDEL;BAVGPOST=0.999;BRSQ=0.709;LDAF=0.0042;AVGPOST=0.9969;RSQ=0.7181;ERATE=0.0006;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2311108 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9531;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2311157 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0044;AVGPOST=0.9982;RSQ=0.8341;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2311279 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.744;LDAF=0.0044;AVGPOST=0.9936;RSQ=0.4775;ERATE=0.0007;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2311292 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0049;AVGPOST=0.9963;RSQ=0.7129;ERATE=0.0004;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2311393 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.984;LDAF=0.2017;AVGPOST=0.9926;RSQ=0.9835;ERATE=0.0008;THETA=0.0002;AC=439;AN=2184 GT:DS:GL:BD 0.20100732 0
1 2311422 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.792;LDAF=0.0045;AVGPOST=0.9992;RSQ=0.9130;ERATE=0.0004;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2311544 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2845;AVGPOST=0.9961;RSQ=0.9925;ERATE=0.0004;THETA=0.0004;AC=622;AN=2184 GT:DS:GL:BD 0.28479853 0
1 2311554 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0025;AVGPOST=0.9974;RSQ=0.5962;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2311555 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6101;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2311579 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.515;LDAF=0.0021;AVGPOST=0.9975;RSQ=0.5615;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2311615 . CAG C 396 PASS INDEL;BAVGPOST=0.999;BRSQ=0.737;LDAF=0.0041;AVGPOST=0.9955;RSQ=0.5583;ERATE=0.0005;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2311648 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2830;AVGPOST=0.9971;RSQ=0.9940;ERATE=0.0004;THETA=0.0003;AC=619;AN=2184 GT:DS:GL:BD 0.28342491 0
1 2311685 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.802;LDAF=0.0032;AVGPOST=0.9981;RSQ=0.7612;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2311805 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.811;LDAF=0.0083;AVGPOST=0.9967;RSQ=0.8410;ERATE=0.0003;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2311816 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2311854 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0012;AVGPOST=0.9978;RSQ=0.2860;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2311880 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0721;AVGPOST=0.9988;RSQ=0.9918;ERATE=0.0004;THETA=0.0004;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 2311965 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0001;AVGPOST=0.9998;RSQ=0.0698;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 2312168 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6237;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2312169 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0729;AVGPOST=0.9991;RSQ=0.9938;ERATE=0.0004;THETA=0.0003;AC=158;AN=2184 GT:DS:GL:BD 0.07234433 0
1 2312187 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6877;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2312289 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4697;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2312395 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.8604;AVGPOST=0.9955;RSQ=0.9854;ERATE=0.0004;THETA=0.0004;AC=1881;AN=2184 GT:DS:GL:BD 0.86126375 1
1 2312407 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.713;LDAF=0.0026;AVGPOST=0.9963;RSQ=0.3970;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2312427 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.847;LDAF=0.0137;AVGPOST=0.9957;RSQ=0.8801;ERATE=0.0004;THETA=0.0002;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 2312428 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.664;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.4086;ERATE=0.0006;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2312460 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0148;AVGPOST=0.9994;RSQ=0.9819;ERATE=0.0004;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 2312479 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.755;LDAF=0.0035;AVGPOST=0.9990;RSQ=0.8736;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2312501 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.6973;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2312550 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0020;AVGPOST=0.9992;RSQ=0.8280;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2312558 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0037;AVGPOST=0.9982;RSQ=0.8188;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2312637 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.7764;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2312715 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8541;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2312721 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0024;AVGPOST=0.9995;RSQ=0.9135;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2312742 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.582;LDAF=0.0035;AVGPOST=0.9973;RSQ=0.6681;ERATE=0.0008;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2312783 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0695;AVGPOST=0.9988;RSQ=0.9914;ERATE=0.0004;THETA=0.0003;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 2312943 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0733;AVGPOST=0.9975;RSQ=0.9840;ERATE=0.0006;THETA=0.0002;AC=158;AN=2184 GT:DS:GL:BD 0.07234433 0
1 2312977 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0032;AVGPOST=0.9989;RSQ=0.8440;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2313109 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.698;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6219;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2313304 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0065;AVGPOST=0.9965;RSQ=0.7708;ERATE=0.0007;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2313355 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0017;AVGPOST=0.9982;RSQ=0.5567;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2313375 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.715;LDAF=0.0037;AVGPOST=0.9969;RSQ=0.7223;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2313402 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.757;LDAF=0.0094;AVGPOST=0.9883;RSQ=0.5276;ERATE=0.0013;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2313540 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.8577;AVGPOST=0.9921;RSQ=0.9759;ERATE=0.0008;THETA=0.0002;AC=1877;AN=2184 GT:DS:GL:BD 0.85943222 1
1 2313611 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0053;AVGPOST=0.9944;RSQ=0.6385;ERATE=0.0006;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2313612 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.0723;AVGPOST=0.9988;RSQ=0.9912;ERATE=0.0004;THETA=0.0002;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 2313650 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.707;LDAF=0.0094;AVGPOST=0.9918;RSQ=0.6676;ERATE=0.0007;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 2313815 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5938;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2313862 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.856;LDAF=0.0059;AVGPOST=0.9992;RSQ=0.9388;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2313894 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.700;LDAF=0.0021;AVGPOST=0.9972;RSQ=0.6004;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2313956 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0071;AVGPOST=0.9979;RSQ=0.8721;ERATE=0.0005;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 2314100 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.750;LDAF=0.0040;AVGPOST=0.9973;RSQ=0.7720;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2314216 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0147;AVGPOST=0.9998;RSQ=0.9943;ERATE=0.0003;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 2314234 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7572;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2314250 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.809;LDAF=0.0168;AVGPOST=0.9957;RSQ=0.9045;ERATE=0.0003;THETA=0.0002;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 2314310 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0040;AVGPOST=0.9976;RSQ=0.7573;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2314319 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.955;LDAF=0.9218;AVGPOST=0.9950;RSQ=0.9736;ERATE=0.0004;THETA=0.0003;AC=2012;AN=2184 GT:DS:GL:BD 0.92124540 1
1 2314408 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.819;LDAF=0.0043;AVGPOST=0.9969;RSQ=0.6969;ERATE=0.0006;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2314422 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0158;AVGPOST=0.9977;RSQ=0.9458;ERATE=0.0003;THETA=0.0002;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 2314463 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3018;AVGPOST=0.9942;RSQ=0.9904;ERATE=0.0009;THETA=0.0004;AC=662;AN=2184 GT:DS:GL:BD 0.30311355 0
1 2314501 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0698;AVGPOST=0.9985;RSQ=0.9917;ERATE=0.0003;THETA=0.0002;AC=151;AN=2184 GT:DS:GL:BD 0.06913920 0
1 2314706 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0035;AVGPOST=0.9988;RSQ=0.8750;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2314775 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0054;AVGPOST=0.9990;RSQ=0.9350;ERATE=0.0004;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2314833 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0040;AVGPOST=0.9971;RSQ=0.7127;ERATE=0.0005;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2314989 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0026;AVGPOST=0.9990;RSQ=0.8431;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2315009 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6464;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2315031 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2315032 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0216;AVGPOST=0.9973;RSQ=0.9592;ERATE=0.0004;THETA=0.0003;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 2315047 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0082;AVGPOST=0.9991;RSQ=0.9500;ERATE=0.0004;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2315123 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.728;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.6462;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2315186 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.960;LDAF=0.0344;AVGPOST=0.9984;RSQ=0.9785;ERATE=0.0004;THETA=0.0003;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 2315263 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.4025;AVGPOST=0.9984;RSQ=0.9977;ERATE=0.0003;THETA=0.0002;AC=879;AN=2184 GT:DS:GL:BD 0.40247253 0
1 2315389 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7104;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2315413 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9827;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2315414 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2174;AVGPOST=0.9978;RSQ=0.9959;ERATE=0.0003;THETA=0.0002;AC=474;AN=2184 GT:DS:GL:BD 0.21703297 0
1 2315435 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7084;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2315438 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.988;LDAF=0.1341;AVGPOST=0.9963;RSQ=0.9875;ERATE=0.0005;THETA=0.0002;AC=292;AN=2184 GT:DS:GL:BD 0.13369964 0
1 2315492 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2315599 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.862;LDAF=0.0034;AVGPOST=0.9971;RSQ=0.7079;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2315680 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5334;AVGPOST=0.9981;RSQ=0.9977;ERATE=0.0004;THETA=0.0003;AC=1165;AN=2184 GT:DS:GL:BD 0.53342491 1
1 2315717 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.6441;AVGPOST=0.9981;RSQ=0.9967;ERATE=0.0006;THETA=0.0002;AC=1407;AN=2184 GT:DS:GL:BD 0.64423078 1
1 2315794 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5543;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2315797 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.530;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6095;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2315821 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2315917 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.8078;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2315966 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0147;AVGPOST=0.9998;RSQ=0.9943;ERATE=0.0003;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 2315994 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5697;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2316114 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.5875;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2316181 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.758;LDAF=0.0023;AVGPOST=0.9987;RSQ=0.8197;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2316182 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9320;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2316208 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6151;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2316259 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9607;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2316315 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5375;AVGPOST=0.9968;RSQ=0.9953;ERATE=0.0007;THETA=0.0004;AC=1174;AN=2184 GT:DS:GL:BD 0.53754580 1
1 2316356 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0093;AVGPOST=0.9978;RSQ=0.9020;ERATE=0.0004;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2316442 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2316489 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8628;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2316511 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2316517 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.977;LDAF=0.0257;AVGPOST=0.9993;RSQ=0.9888;ERATE=0.0003;THETA=0.0002;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 2316578 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.798;LDAF=0.0166;AVGPOST=0.9799;RSQ=0.5559;ERATE=0.0028;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2316583 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.987;LDAF=0.0789;AVGPOST=0.9982;RSQ=0.9888;ERATE=0.0004;THETA=0.0006;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 2316591 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0090;AVGPOST=0.9985;RSQ=0.9287;ERATE=0.0004;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2316785 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0030;AVGPOST=0.9973;RSQ=0.6928;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2317069 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.992;LDAF=0.2996;AVGPOST=0.9943;RSQ=0.9918;ERATE=0.0024;THETA=0.0007;AC=655;AN=2184 GT:DS:GL:BD 0.29990843 0
1 2317125 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9076;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2317150 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2317201 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2317268 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2317353 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2317494 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0653;AVGPOST=0.9990;RSQ=0.9934;ERATE=0.0003;THETA=0.0002;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 2317518 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9695;ERATE=0.0003;THETA=0.0001;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2317643 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8636;ERATE=0.0008;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2317777 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0007;AVGPOST=0.9986;RSQ=0.2323;ERATE=0.0006;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 2317796 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0044;AVGPOST=0.9979;RSQ=0.8330;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2317818 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7220;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2317901 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0038;AVGPOST=0.9989;RSQ=0.8873;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2317920 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0160;AVGPOST=0.9979;RSQ=0.9427;ERATE=0.0006;THETA=0.0008;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 2318060 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1066;AVGPOST=0.9961;RSQ=0.9844;ERATE=0.0006;THETA=0.0004;AC=232;AN=2184 GT:DS:GL:BD 0.10622711 0
1 2318181 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.821;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2318209 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2318248 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0096;AVGPOST=0.9995;RSQ=0.9776;ERATE=0.0003;THETA=0.0007;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 2318255 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2318504 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8277;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2318549 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5469;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2318606 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0023;AVGPOST=0.9996;RSQ=0.9219;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2318620 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.824;LDAF=0.0030;AVGPOST=0.9974;RSQ=0.7061;ERATE=0.0011;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2318653 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0884;AVGPOST=0.9995;RSQ=0.9975;ERATE=0.0003;THETA=0.0003;AC=192;AN=2184 GT:DS:GL:BD 0.08791209 0
1 2318709 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0070;AVGPOST=0.9997;RSQ=0.9811;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 2318870 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2318871 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9404;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2318900 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2318901 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2318918 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2319141 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2319156 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5678;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2319329 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0152;AVGPOST=0.9994;RSQ=0.9833;ERATE=0.0003;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 2319363 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0051;AVGPOST=0.9997;RSQ=0.9743;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2319406 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0018;AVGPOST=1.0000;RSQ=0.9879;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2319428 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4452;AVGPOST=0.9982;RSQ=0.9975;ERATE=0.0004;THETA=0.0004;AC=974;AN=2184 GT:DS:GL:BD 0.44597068 0
1 2319530 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0123;AVGPOST=0.9994;RSQ=0.9806;ERATE=0.0003;THETA=0.0002;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 2319588 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2319611 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2319642 . GAA G 1257 PASS INDEL;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0107;AVGPOST=0.9968;RSQ=0.8704;ERATE=0.0005;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 2319720 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2319819 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2319862 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2319905 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2319909 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2319933 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9359;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2320089 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0080;AVGPOST=0.9993;RSQ=0.9599;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2320170 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.739;LDAF=0.0028;AVGPOST=0.9970;RSQ=0.6341;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2320196 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.802;LDAF=0.0285;AVGPOST=0.9895;RSQ=0.8519;ERATE=0.0010;THETA=0.0002;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 2320237 . AAAG A 639 PASS INDEL;BAVGPOST=0.975;BRSQ=0.851;LDAF=0.1117;AVGPOST=0.9320;RSQ=0.7238;ERATE=0.0072;THETA=0.0003;AC=200;AN=2184 GT:DS:GL:BD 0.09157509 0
1 2320570 rs71511343 A AAAG 5635 PASS INDEL;BAVGPOST=0.808;BRSQ=0.708;LDAF=0.4091;AVGPOST=0.8183;RSQ=0.7605;ERATE=0.0248;THETA=0.0003;AC=925;AN=2184 GT:DS:GL:BD 0.42353481 0
1 2320601 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.870;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8860;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2320695 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0166;AVGPOST=0.9995;RSQ=0.9868;ERATE=0.0003;THETA=0.0007;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 2320702 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.980;LDAF=0.1254;AVGPOST=0.9963;RSQ=0.9876;ERATE=0.0003;THETA=0.0003;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 2321099 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0721;AVGPOST=0.9991;RSQ=0.9952;ERATE=0.0003;THETA=0.0004;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 2321294 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2321335 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2321375 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 2321413 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2321601 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0022;AVGPOST=0.9995;RSQ=0.9190;ERATE=0.0003;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2321655 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0041;AVGPOST=1.0000;RSQ=0.9947;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2321692 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2321734 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7385;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2321848 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9558;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2321989 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0059;AVGPOST=0.9993;RSQ=0.9431;ERATE=0.0004;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2322004 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6583;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2322019 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.864;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8526;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2322146 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2322159 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6674;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2322160 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0025;AVGPOST=0.9983;RSQ=0.7542;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2322340 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.7431;ERATE=0.0005;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2322438 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0045;AVGPOST=0.9965;RSQ=0.6713;ERATE=0.0007;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2322541 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.704;LDAF=0.0037;AVGPOST=0.9967;RSQ=0.6186;ERATE=0.0006;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2322621 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.951;LDAF=0.0106;AVGPOST=0.9971;RSQ=0.8877;ERATE=0.0004;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 2322726 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.865;LDAF=0.0458;AVGPOST=0.9858;RSQ=0.8781;ERATE=0.0006;THETA=0.0002;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 2322996 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.736;LDAF=0.0094;AVGPOST=0.9943;RSQ=0.7494;ERATE=0.0005;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2323029 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.870;LDAF=0.0099;AVGPOST=0.9953;RSQ=0.7948;ERATE=0.0010;THETA=0.0017;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2323041 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.984;LDAF=0.1974;AVGPOST=0.9793;RSQ=0.9519;ERATE=0.0013;THETA=0.0006;AC=428;AN=2184 GT:DS:GL:BD 0.19597070 0
1 2323567 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.879;BRSQ=0.785;LDAF=0.4478;AVGPOST=0.8158;RSQ=0.7331;ERATE=0.0115;THETA=0.0004;AC=966;AN=2184 GT:DS:GL:BD 0.44230768 0
1 2323606 . T TG 324 PASS INDEL;BAVGPOST=0.928;BRSQ=0.453;LDAF=0.0909;AVGPOST=0.9485;RSQ=0.7658;ERATE=0.0025;THETA=0.0066;AC=189;AN=2184 GT:DS:GL:BD 0.08653846 0
1 2323746 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.738;LDAF=0.0050;AVGPOST=0.9964;RSQ=0.7449;ERATE=0.0003;THETA=0.0050;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2323796 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.775;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5415;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2323870 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0039;AVGPOST=0.9983;RSQ=0.8076;ERATE=0.0007;THETA=0.0012;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2323897 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.6185;ERATE=0.0003;THETA=0.0018;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2323912 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6461;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2323949 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6395;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2323975 . T TA 401 PASS INDEL;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8783;ERATE=0.0004;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2324008 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.977;LDAF=0.8328;AVGPOST=0.9893;RSQ=0.9701;ERATE=0.0007;THETA=0.0084;AC=1820;AN=2184 GT:DS:GL:BD 0.83333331 1
1 2324236 . CAG C 287 PASS INDEL;BAVGPOST=0.999;BRSQ=0.807;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8493;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2324321 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.973;LDAF=0.1035;AVGPOST=0.9960;RSQ=0.9826;ERATE=0.0004;THETA=0.0039;AC=226;AN=2184 GT:DS:GL:BD 0.10347985 0
1 2324336 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.970;LDAF=0.3395;AVGPOST=0.9660;RSQ=0.9521;ERATE=0.0097;THETA=0.0044;AC=748;AN=2184 GT:DS:GL:BD 0.34249085 0
1 2324366 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5763;ERATE=0.0004;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2324449 . TG T 870 PASS INDEL;BAVGPOST=0.991;BRSQ=0.652;LDAF=0.0099;AVGPOST=0.9928;RSQ=0.7407;ERATE=0.0004;THETA=0.0008;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 2324587 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8627;ERATE=0.0004;THETA=0.0055;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2324712 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0020;AVGPOST=0.9993;RSQ=0.8441;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2324726 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.823;LDAF=0.0047;AVGPOST=0.9975;RSQ=0.7718;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2324795 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9582;ERATE=0.0003;THETA=0.0020;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2324859 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.5703;ERATE=0.0005;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2324872 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.926;LDAF=0.0148;AVGPOST=0.9977;RSQ=0.9396;ERATE=0.0003;THETA=0.0002;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 2324873 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8770;ERATE=0.0003;THETA=0.0100;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2324881 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.947;BRSQ=0.889;LDAF=0.2578;AVGPOST=0.9407;RSQ=0.8919;ERATE=0.0617;THETA=0.0051;AC=535;AN=2184 GT:DS:GL:BD 0.24496336 0
1 2324923 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.773;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6862;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2324963 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7239;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2324987 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.762;LDAF=0.0013;AVGPOST=0.9994;RSQ=0.8168;ERATE=0.0003;THETA=0.0075;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2325029 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8648;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2325124 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0003;THETA=0.0045;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2325160 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.943;LDAF=0.0279;AVGPOST=0.9971;RSQ=0.9588;ERATE=0.0004;THETA=0.0014;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 2325187 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.862;LDAF=0.0043;AVGPOST=0.9983;RSQ=0.8508;ERATE=0.0003;THETA=0.0033;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2325254 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0003;THETA=0.0097;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2325271 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0003;THETA=0.0073;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2325338 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6616;ERATE=0.0003;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2325371 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.942;LDAF=0.0755;AVGPOST=0.9935;RSQ=0.9675;ERATE=0.0003;THETA=0.0107;AC=165;AN=2184 GT:DS:GL:BD 0.07554945 0
1 2325488 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2325544 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.8075;ERATE=0.0003;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2325548 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.949;LDAF=0.0129;AVGPOST=0.9981;RSQ=0.9480;ERATE=0.0003;THETA=0.0018;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 2325612 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2325619 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7193;ERATE=0.0003;THETA=0.0036;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2325675 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0043;AVGPOST=0.9991;RSQ=0.9159;ERATE=0.0004;THETA=0.0064;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2325745 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8178;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2325758 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0025;AVGPOST=0.9982;RSQ=0.7351;ERATE=0.0004;THETA=0.0079;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2325760 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.908;LDAF=0.0215;AVGPOST=0.9973;RSQ=0.9464;ERATE=0.0004;THETA=0.0101;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 2325788 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9346;ERATE=0.0003;THETA=0.0017;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2325815 rs3840421 AC A 225 PASS INDEL;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7974;ERATE=0.0003;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2325833 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5607;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2325845 . G GT 106 PASS INDEL;BAVGPOST=0.999;BRSQ=0.837;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6250;ERATE=0.0004;THETA=0.0039;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2325850 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.767;LDAF=0.0016;AVGPOST=0.9976;RSQ=0.4203;ERATE=0.0003;THETA=0.0041;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2325987 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9802;ERATE=0.0003;THETA=0.0049;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2326009 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.986;LDAF=0.3612;AVGPOST=0.9913;RSQ=0.9862;ERATE=0.0008;THETA=0.0015;AC=788;AN=2184 GT:DS:GL:BD 0.36080587 0
1 2326101 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7084;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2326196 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8396;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2326353 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9375;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2326468 . CT C 233 PASS INDEL;BAVGPOST=1.000;BRSQ=0.719;LDAF=0.0024;AVGPOST=0.9977;RSQ=0.5908;ERATE=0.0005;THETA=0.0024;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2326533 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.616;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5766;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2326535 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2326544 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6924;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2326598 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.880;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9335;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2326612 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8483;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2326615 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8470;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2326799 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0033;AVGPOST=0.9955;RSQ=0.5046;ERATE=0.0006;THETA=0.0015;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2326800 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.953;LDAF=0.0430;AVGPOST=0.9972;RSQ=0.9743;ERATE=0.0004;THETA=0.0013;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 2326812 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.3775;AVGPOST=0.9942;RSQ=0.9913;ERATE=0.0004;THETA=0.0004;AC=821;AN=2184 GT:DS:GL:BD 0.37591577 0
1 2326816 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.506;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.6781;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2326860 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0091;AVGPOST=0.9979;RSQ=0.9123;ERATE=0.0004;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2326892 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.6769;ERATE=0.0007;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2326918 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2713;AVGPOST=0.9972;RSQ=0.9947;ERATE=0.0003;THETA=0.0006;AC=593;AN=2184 GT:DS:GL:BD 0.27152014 0
1 2326960 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0433;AVGPOST=0.9979;RSQ=0.9818;ERATE=0.0004;THETA=0.0005;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 2327004 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9437;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2327030 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.8289;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2327031 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7657;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2327064 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2327075 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2681;AVGPOST=0.9988;RSQ=0.9975;ERATE=0.0003;THETA=0.0006;AC=587;AN=2184 GT:DS:GL:BD 0.26877290 0
1 2327136 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8945;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2327284 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2327361 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2327522 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9998;RSQ=0.9626;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2327564 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8036;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2327580 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7432;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2327653 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0048;AVGPOST=0.9992;RSQ=0.9228;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2327713 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.867;LDAF=0.0077;AVGPOST=0.9964;RSQ=0.8315;ERATE=0.0004;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2327815 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.5244;AVGPOST=0.9972;RSQ=0.9952;ERATE=0.0003;THETA=0.0008;AC=1142;AN=2184 GT:DS:GL:BD 0.52289379 1
1 2327831 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8609;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2327861 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8664;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2327893 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7359;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2327970 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0025;AVGPOST=0.9974;RSQ=0.6203;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2328016 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0029;AVGPOST=0.9990;RSQ=0.8588;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2328085 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.847;LDAF=0.0063;AVGPOST=0.9977;RSQ=0.8595;ERATE=0.0005;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2328089 . CAT C 447 PASS INDEL;BAVGPOST=0.997;BRSQ=0.764;LDAF=0.0075;AVGPOST=0.9967;RSQ=0.8103;ERATE=0.0008;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2328207 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.725;LDAF=0.0025;AVGPOST=0.9983;RSQ=0.7432;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2328267 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2328282 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6244;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2328346 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0013;AVGPOST=0.9998;RSQ=0.9244;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2328439 . C CT 17 PASS INDEL;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4489;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2328443 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2328507 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9747;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2328592 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2328714 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8315;AVGPOST=0.9994;RSQ=0.9987;ERATE=0.0003;THETA=0.0002;AC=1816;AN=2184 GT:DS:GL:BD 0.83150184 1
1 2328796 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8665;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2328831 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7941;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2328856 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7764;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2328859 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2329052 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0058;AVGPOST=0.9977;RSQ=0.8691;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2329158 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0505;AVGPOST=0.9995;RSQ=0.9952;ERATE=0.0003;THETA=0.0004;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 2329164 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.820;LDAF=0.0033;AVGPOST=0.9988;RSQ=0.8483;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2329212 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.892;LDAF=0.0196;AVGPOST=0.9947;RSQ=0.8828;ERATE=0.0005;THETA=0.0002;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 2329218 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7905;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2329320 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5995;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2329403 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.741;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6548;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2329413 rs57204595 AC A 10068 PASS INDEL;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.0965;AVGPOST=0.9982;RSQ=0.9914;ERATE=0.0003;THETA=0.0005;AC=210;AN=2184 GT:DS:GL:BD 0.09615385 0
1 2329422 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2329472 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0003;AVGPOST=0.9994;RSQ=0.2281;ERATE=0.0003;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 2329506 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2329553 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8241;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2329563 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.767;LDAF=0.0030;AVGPOST=0.9963;RSQ=0.5915;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2329564 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0111;AVGPOST=0.9995;RSQ=0.9802;ERATE=0.0004;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 2329572 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2329606 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2329615 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6441;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2329661 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.984;LDAF=0.3580;AVGPOST=0.9984;RSQ=0.9970;ERATE=0.0006;THETA=0.0002;AC=781;AN=2184 GT:DS:GL:BD 0.35760072 0
1 2329682 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.894;LDAF=0.0048;AVGPOST=0.9987;RSQ=0.8969;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2329755 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0005;AVGPOST=0.9991;RSQ=0.3493;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2329808 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.987;LDAF=0.9027;AVGPOST=0.9967;RSQ=0.9864;ERATE=0.0006;THETA=0.0006;AC=1973;AN=2184 GT:DS:GL:BD 0.90338826 1
1 2329879 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.722;LDAF=0.0058;AVGPOST=0.9944;RSQ=0.6623;ERATE=0.0006;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2329882 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.691;LDAF=0.0275;AVGPOST=0.9860;RSQ=0.7997;ERATE=0.0010;THETA=0.0003;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 2330000 . GTA G 639 PASS INDEL;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0106;AVGPOST=0.9980;RSQ=0.9222;ERATE=0.0005;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 2330002 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.962;LDAF=0.1182;AVGPOST=0.9922;RSQ=0.9714;ERATE=0.0007;THETA=0.0003;AC=257;AN=2184 GT:DS:GL:BD 0.11767399 0
1 2330016 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.964;BRSQ=0.934;LDAF=0.3943;AVGPOST=0.9739;RSQ=0.9585;ERATE=0.0037;THETA=0.0003;AC=863;AN=2184 GT:DS:GL:BD 0.39514652 0
1 2330028 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.544;LDAF=0.0116;AVGPOST=0.9888;RSQ=0.6063;ERATE=0.0007;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 2330035 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0041;AVGPOST=0.9971;RSQ=0.6760;ERATE=0.0007;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2330040 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0019;AVGPOST=0.9975;RSQ=0.4634;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2330124 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.849;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2330158 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.6888;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2330190 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3604;AVGPOST=0.9958;RSQ=0.9929;ERATE=0.0012;THETA=0.0004;AC=784;AN=2184 GT:DS:GL:BD 0.35897437 0
1 2330223 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6507;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2330250 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0016;AVGPOST=0.9983;RSQ=0.5646;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2330393 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2330399 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6651;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2330402 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5313;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2330490 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0035;AVGPOST=0.9975;RSQ=0.6835;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2330566 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.658;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5229;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2330602 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4709;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2330654 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9643;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2330661 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0065;AVGPOST=0.9999;RSQ=0.9899;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2330687 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0087;AVGPOST=1.0000;RSQ=0.9975;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 2330801 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2330814 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2330959 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0500;ERATE=0.0003;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 2331132 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.679;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2331139 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0413;AVGPOST=0.9996;RSQ=0.9953;ERATE=0.0003;THETA=0.0012;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 2331201 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0059;AVGPOST=0.9990;RSQ=0.9319;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2331236 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.8033;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2331254 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0047;AVGPOST=0.9969;RSQ=0.7836;ERATE=0.0005;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2331302 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0007;AVGPOST=0.9991;RSQ=0.4125;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2331331 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0027;AVGPOST=0.9985;RSQ=0.8253;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2331333 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0020;AVGPOST=0.9992;RSQ=0.8336;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2331383 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0059;AVGPOST=0.9989;RSQ=0.9213;ERATE=0.0004;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2331490 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5025;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2331498 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7780;ERATE=0.0007;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2331499 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.782;LDAF=0.0095;AVGPOST=0.9920;RSQ=0.7060;ERATE=0.0005;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2331601 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6526;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2331623 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0026;AVGPOST=0.9985;RSQ=0.7927;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2331754 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5181;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2331800 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0096;AVGPOST=0.9990;RSQ=0.9577;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2331802 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7743;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2331872 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.645;LDAF=0.0007;AVGPOST=0.9987;RSQ=0.2551;ERATE=0.0004;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 2331921 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.764;LDAF=0.0047;AVGPOST=0.9967;RSQ=0.6988;ERATE=0.0016;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2331923 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.760;LDAF=0.0026;AVGPOST=0.9977;RSQ=0.6779;ERATE=0.0005;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2332038 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0949;AVGPOST=0.9989;RSQ=0.9953;ERATE=0.0004;THETA=0.0006;AC=206;AN=2184 GT:DS:GL:BD 0.09432235 0
1 2332142 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0056;AVGPOST=0.9999;RSQ=0.9881;ERATE=0.0003;THETA=0.0014;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2332152 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2332189 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2332391 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3497;AVGPOST=0.9977;RSQ=0.9959;ERATE=0.0004;THETA=0.0010;AC=762;AN=2184 GT:DS:GL:BD 0.34890109 0
1 2332602 . CG C 24 PASS INDEL;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0049;AVGPOST=0.9938;RSQ=0.5078;ERATE=0.0005;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2332640 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.949;BRSQ=0.879;LDAF=0.7545;AVGPOST=0.9165;RSQ=0.8395;ERATE=0.0167;THETA=0.0003;AC=1690;AN=2184 GT:DS:GL:BD 0.77380955 1
1 2332651 . C CG 2690 PASS INDEL;BAVGPOST=0.858;BRSQ=0.373;LDAF=0.1903;AVGPOST=0.7949;RSQ=0.4373;ERATE=0.0373;THETA=0.0004;AC=270;AN=2184 GT:DS:GL:BD 0.12362637 0
1 2332665 . TC T 1802 PASS INDEL;BAVGPOST=0.743;BRSQ=0.364;LDAF=0.2742;AVGPOST=0.7367;RSQ=0.4491;ERATE=0.0549;THETA=0.0003;AC=437;AN=2184 GT:DS:GL:BD 0.20009157 0
1 2332726 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.876;BRSQ=0.326;LDAF=0.1865;AVGPOST=0.7570;RSQ=0.3252;ERATE=0.0378;THETA=0.0003;AC=191;AN=2184 GT:DS:GL:BD 0.08745421 0
1 2332763 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.827;BRSQ=0.266;LDAF=0.2207;AVGPOST=0.7337;RSQ=0.3382;ERATE=0.0444;THETA=0.0003;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 2332777 . CCTT C 649 PASS INDEL;BAVGPOST=0.867;BRSQ=0.238;LDAF=0.1736;AVGPOST=0.7768;RSQ=0.3598;ERATE=0.0232;THETA=0.0007;AC=195;AN=2184 GT:DS:GL:BD 0.08928572 0
1 2332820 . C CT 2719 PASS INDEL;BAVGPOST=0.751;BRSQ=0.251;LDAF=0.2862;AVGPOST=0.7027;RSQ=0.3450;ERATE=0.0819;THETA=0.0003;AC=389;AN=2184 GT:DS:GL:BD 0.17811355 0
1 2332828 . TCC T 176 PASS INDEL;BAVGPOST=0.910;BRSQ=0.166;LDAF=0.1601;AVGPOST=0.7670;RSQ=0.3041;ERATE=0.0223;THETA=0.0007;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 2332845 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.798;LDAF=0.0887;AVGPOST=0.9610;RSQ=0.8163;ERATE=0.0034;THETA=0.0004;AC=179;AN=2184 GT:DS:GL:BD 0.08195971 0
1 2332851 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.943;BRSQ=0.693;LDAF=0.1469;AVGPOST=0.8925;RSQ=0.6482;ERATE=0.0211;THETA=0.0005;AC=247;AN=2184 GT:DS:GL:BD 0.11309524 0
1 2332952 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0058;AVGPOST=0.9994;RSQ=0.9514;ERATE=0.0003;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2332958 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.714;LDAF=0.0035;AVGPOST=0.9968;RSQ=0.6390;ERATE=0.0006;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2332988 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.7981;AVGPOST=0.9965;RSQ=0.9923;ERATE=0.0007;THETA=0.0008;AC=1742;AN=2184 GT:DS:GL:BD 0.79761904 1
1 2332989 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.558;LDAF=0.0072;AVGPOST=0.9975;RSQ=0.8488;ERATE=0.0004;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2333031 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.983;LDAF=0.7997;AVGPOST=0.9981;RSQ=0.9951;ERATE=0.0006;THETA=0.0003;AC=1746;AN=2184 GT:DS:GL:BD 0.79945058 1
1 2333060 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.785;LDAF=0.0064;AVGPOST=0.9990;RSQ=0.9317;ERATE=0.0004;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2333121 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.896;LDAF=0.0056;AVGPOST=0.9990;RSQ=0.9284;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2333181 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5543;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2333288 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0050;AVGPOST=0.9984;RSQ=0.8816;ERATE=0.0004;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2333341 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7617;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2333820 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2333914 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7457;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2333919 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7675;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2333941 . C CG 62 PASS INDEL;BAVGPOST=0.970;BRSQ=0.318;LDAF=0.0424;AVGPOST=0.9406;RSQ=0.4366;ERATE=0.0055;THETA=0.0005;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 2333944 rs80083629 T TC 61475 PASS INDEL;BAVGPOST=0.985;BRSQ=0.966;LDAF=0.8111;AVGPOST=0.9863;RSQ=0.9702;ERATE=0.0006;THETA=0.0011;AC=1771;AN=2184 GT:DS:GL:BD 0.81089741 1
1 2333946 . C CA 19203 PASS INDEL;BAVGPOST=0.921;BRSQ=0.813;LDAF=0.7195;AVGPOST=0.8738;RSQ=0.7642;ERATE=0.0234;THETA=0.0003;AC=1635;AN=2184 GT:DS:GL:BD 0.74862635 1
1 2333947 . C CG 17200 PASS INDEL;BAVGPOST=0.915;BRSQ=0.802;LDAF=0.7119;AVGPOST=0.8527;RSQ=0.7279;ERATE=0.0353;THETA=0.0004;AC=1632;AN=2184 GT:DS:GL:BD 0.74725276 1
1 2333976 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.748;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5040;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2334022 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0111;AVGPOST=0.9982;RSQ=0.9339;ERATE=0.0003;THETA=0.0009;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 2334174 . GCCT G 223 PASS INDEL;BAVGPOST=1.000;BRSQ=0.695;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4706;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2334237 . GC G 51 PASS INDEL;BAVGPOST=1.000;BRSQ=0.728;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.7990;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2334248 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0048;AVGPOST=0.9991;RSQ=0.9196;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2334261 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0939;AVGPOST=0.9989;RSQ=0.9941;ERATE=0.0004;THETA=0.0005;AC=204;AN=2184 GT:DS:GL:BD 0.09340660 0
1 2334280 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8890;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2334391 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5118;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2334430 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9524;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2334436 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.8078;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2334462 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0001;AVGPOST=0.9999;RSQ=0.0499;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 2334509 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2334542 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0032;AVGPOST=0.9995;RSQ=0.9417;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2334567 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2334671 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8525;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2334723 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.853;LDAF=0.0061;AVGPOST=0.9986;RSQ=0.9195;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2334727 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2334752 . ATTTC A 184 PASS INDEL;BAVGPOST=0.999;BRSQ=0.754;LDAF=0.0021;AVGPOST=0.9982;RSQ=0.6475;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2334807 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7072;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2334856 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.597;LDAF=0.0166;AVGPOST=0.9939;RSQ=0.8436;ERATE=0.0005;THETA=0.0009;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 2334863 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0066;AVGPOST=0.9946;RSQ=0.6835;ERATE=0.0005;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2335075 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9857;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2335182 . ATATTT A 102 PASS INDEL;BAVGPOST=1.000;BRSQ=0.712;LDAF=0.0113;AVGPOST=0.9836;RSQ=0.5000;ERATE=0.0009;THETA=0.0002;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 2335326 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0063;AVGPOST=0.9980;RSQ=0.8746;ERATE=0.0006;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2335380 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5929;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2335415 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.888;LDAF=0.0057;AVGPOST=0.9991;RSQ=0.9446;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2335592 . C CG 945 PASS INDEL;BAVGPOST=0.988;BRSQ=0.682;LDAF=0.0178;AVGPOST=0.9942;RSQ=0.8629;ERATE=0.0004;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 2335676 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.8041;AVGPOST=0.9980;RSQ=0.9948;ERATE=0.0005;THETA=0.0002;AC=1755;AN=2184 GT:DS:GL:BD 0.80357140 1
1 2335723 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7512;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2335728 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0114;AVGPOST=0.9989;RSQ=0.9615;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 2335742 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0020;AVGPOST=0.9981;RSQ=0.6315;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2335784 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0032;AVGPOST=0.9986;RSQ=0.8107;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2335819 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9330;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2335871 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0482;AVGPOST=0.9991;RSQ=0.9919;ERATE=0.0005;THETA=0.0006;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 2335873 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0487;AVGPOST=0.9982;RSQ=0.9842;ERATE=0.0004;THETA=0.0004;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 2335888 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0061;AVGPOST=0.9995;RSQ=0.9638;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2335892 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.657;LDAF=0.0031;AVGPOST=0.9975;RSQ=0.6764;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2335969 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.3314;AVGPOST=0.9969;RSQ=0.9941;ERATE=0.0007;THETA=0.0004;AC=723;AN=2184 GT:DS:GL:BD 0.33104396 0
1 2336092 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7669;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2336112 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6690;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2336113 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0093;AVGPOST=0.9997;RSQ=0.9834;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2336132 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0030;AVGPOST=0.9975;RSQ=0.6411;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2336192 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0046;AVGPOST=0.9965;RSQ=0.7452;ERATE=0.0006;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2336210 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2755;AVGPOST=0.9984;RSQ=0.9966;ERATE=0.0004;THETA=0.0003;AC=601;AN=2184 GT:DS:GL:BD 0.27518314 0
1 2336296 . ACT A 45 PASS INDEL;BAVGPOST=1.000;BRSQ=0.745;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4245;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2336449 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.413;LDAF=0.0029;AVGPOST=0.9969;RSQ=0.5594;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2336519 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.568;LDAF=0.0224;AVGPOST=0.9745;RSQ=0.5627;ERATE=0.0051;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 2336523 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0026;AVGPOST=0.9963;RSQ=0.4427;ERATE=0.0006;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2336529 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0045;AVGPOST=0.9996;RSQ=0.9664;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2336560 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2336562 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.738;LDAF=0.0037;AVGPOST=0.9975;RSQ=0.7369;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2336610 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8703;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2336651 . GTCA G 404 PASS INDEL;BAVGPOST=0.999;BRSQ=0.890;LDAF=0.0050;AVGPOST=0.9985;RSQ=0.8609;ERATE=0.0007;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2336853 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0096;AVGPOST=0.9990;RSQ=0.9633;ERATE=0.0004;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2336931 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7756;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2336973 . AC A 81 PASS INDEL;BAVGPOST=1.000;BRSQ=0.736;LDAF=0.0024;AVGPOST=0.9968;RSQ=0.4799;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2337032 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3162;AVGPOST=0.9987;RSQ=0.9974;ERATE=0.0004;THETA=0.0004;AC=690;AN=2184 GT:DS:GL:BD 0.31593406 0
1 2337164 . CCGTA C 1022 PASS INDEL;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0044;AVGPOST=0.9990;RSQ=0.9031;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2337194 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0394;AVGPOST=0.9999;RSQ=0.9984;ERATE=0.0003;THETA=0.0003;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 2337277 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0931;AVGPOST=0.9994;RSQ=0.9973;ERATE=0.0004;THETA=0.0005;AC=202;AN=2184 GT:DS:GL:BD 0.09249084 0
1 2337332 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0061;AVGPOST=0.9998;RSQ=0.9822;ERATE=0.0003;THETA=0.0023;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2337367 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2337403 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.950;LDAF=0.0197;AVGPOST=0.9990;RSQ=0.9832;ERATE=0.0003;THETA=0.0002;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 2337451 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.687;LDAF=0.0024;AVGPOST=0.9982;RSQ=0.7215;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2337537 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.978;LDAF=0.7981;AVGPOST=0.9966;RSQ=0.9909;ERATE=0.0009;THETA=0.0004;AC=1744;AN=2184 GT:DS:GL:BD 0.79853481 1
1 2337554 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0097;AVGPOST=0.9989;RSQ=0.9464;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2337556 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.634;LDAF=0.0019;AVGPOST=0.9971;RSQ=0.3724;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2337560 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.813;LDAF=0.0119;AVGPOST=0.9967;RSQ=0.8889;ERATE=0.0004;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 2337730 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0040;AVGPOST=0.9988;RSQ=0.8925;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2337850 . TCTG T 30 PASS INDEL;BAVGPOST=1.000;BRSQ=0.709;LDAF=0.0022;AVGPOST=0.9974;RSQ=0.4824;ERATE=0.0007;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2337875 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0044;AVGPOST=0.9988;RSQ=0.8944;ERATE=0.0004;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2337939 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2337992 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9755;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2338014 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2338015 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0098;AVGPOST=0.9996;RSQ=0.9831;ERATE=0.0003;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 2338019 rs61752093 CAG C 121 PASS INDEL;BAVGPOST=0.999;BRSQ=0.650;LDAF=0.0008;AVGPOST=0.9988;RSQ=0.3225;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2338079 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2338126 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3479;AVGPOST=0.9987;RSQ=0.9980;ERATE=0.0003;THETA=0.0005;AC=760;AN=2184 GT:DS:GL:BD 0.34798536 0
1 2338170 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2338204 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6034;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2338223 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8749;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2338250 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0034;AVGPOST=0.9994;RSQ=0.9223;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2338308 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2338314 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9160;ERATE=0.0007;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2338324 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2338331 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2338361 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2338429 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8338;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2338535 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0034;AVGPOST=0.9987;RSQ=0.8565;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2338569 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7984;AVGPOST=0.9995;RSQ=0.9986;ERATE=0.0003;THETA=0.0003;AC=1743;AN=2184 GT:DS:GL:BD 0.79807693 1
1 2338658 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0488;AVGPOST=0.9991;RSQ=0.9917;ERATE=0.0004;THETA=0.0004;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 2338665 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2338715 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0044;AVGPOST=0.9978;RSQ=0.7998;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2338879 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.985;LDAF=0.6761;AVGPOST=0.9713;RSQ=0.9532;ERATE=0.0033;THETA=0.0010;AC=1480;AN=2184 GT:DS:GL:BD 0.67765570 1
1 2338889 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.431;LDAF=0.0054;AVGPOST=0.9941;RSQ=0.6198;ERATE=0.0004;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2339050 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2339074 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7784;AVGPOST=0.9989;RSQ=0.9975;ERATE=0.0004;THETA=0.0004;AC=1699;AN=2184 GT:DS:GL:BD 0.77793038 1
1 2339075 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.758;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2339115 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.8455;AVGPOST=0.9971;RSQ=0.9924;ERATE=0.0004;THETA=0.0004;AC=1848;AN=2184 GT:DS:GL:BD 0.84615386 1
1 2339128 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0045;AVGPOST=0.9982;RSQ=0.8202;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2339139 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.3500;AVGPOST=0.9968;RSQ=0.9941;ERATE=0.0007;THETA=0.0003;AC=762;AN=2184 GT:DS:GL:BD 0.34890109 0
1 2339142 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0050;AVGPOST=0.9992;RSQ=0.9267;ERATE=0.0004;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2339215 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.915;LDAF=0.0085;AVGPOST=0.9987;RSQ=0.9409;ERATE=0.0004;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2339395 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.981;LDAF=0.7722;AVGPOST=0.9940;RSQ=0.9868;ERATE=0.0004;THETA=0.0002;AC=1685;AN=2184 GT:DS:GL:BD 0.77152014 1
1 2339398 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.936;LDAF=0.0333;AVGPOST=0.9951;RSQ=0.9504;ERATE=0.0004;THETA=0.0002;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 2339427 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.957;LDAF=0.3410;AVGPOST=0.9647;RSQ=0.9401;ERATE=0.0048;THETA=0.0008;AC=739;AN=2184 GT:DS:GL:BD 0.33836997 0
1 2339573 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0479;AVGPOST=0.9963;RSQ=0.9718;ERATE=0.0004;THETA=0.0003;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 2339595 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.514;LDAF=0.0039;AVGPOST=0.9969;RSQ=0.6872;ERATE=0.0006;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2339605 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0037;AVGPOST=0.9991;RSQ=0.8879;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2339609 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.975;LDAF=0.0545;AVGPOST=0.9953;RSQ=0.9699;ERATE=0.0004;THETA=0.0010;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 2339624 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0047;AVGPOST=0.9971;RSQ=0.7598;ERATE=0.0005;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2339853 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2339868 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6612;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2339908 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7959;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2339936 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9895;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2339964 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2339996 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6710;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2340064 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2340073 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.848;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7946;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2340159 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0060;AVGPOST=0.9992;RSQ=0.9486;ERATE=0.0004;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2340173 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0069;AVGPOST=0.9998;RSQ=0.9873;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 2340200 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.7260;AVGPOST=0.9987;RSQ=0.9972;ERATE=0.0022;THETA=0.0003;AC=1586;AN=2184 GT:DS:GL:BD 0.72619045 1
1 2340212 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.980;LDAF=0.0247;AVGPOST=0.9994;RSQ=0.9900;ERATE=0.0003;THETA=0.0014;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 2340316 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2340350 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2340443 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.726;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6927;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2340504 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.984;LDAF=0.3084;AVGPOST=0.9908;RSQ=0.9842;ERATE=0.0003;THETA=0.0030;AC=673;AN=2184 GT:DS:GL:BD 0.30815017 0
1 2340539 . CT C 1461 PASS INDEL;BAVGPOST=0.997;BRSQ=0.955;LDAF=0.0365;AVGPOST=0.9909;RSQ=0.9028;ERATE=0.0006;THETA=0.0011;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 2340726 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.6498;ERATE=0.0006;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2340745 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7082;ERATE=0.0004;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2340859 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.816;LDAF=0.0040;AVGPOST=0.9973;RSQ=0.7261;ERATE=0.0008;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2340871 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.679;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4055;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2340957 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8467;ERATE=0.0004;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2341060 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.964;BRSQ=0.897;LDAF=0.1752;AVGPOST=0.9843;RSQ=0.9592;ERATE=0.0004;THETA=0.0005;AC=373;AN=2184 GT:DS:GL:BD 0.17078754 0
1 2341116 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0020;AVGPOST=0.9974;RSQ=0.5048;ERATE=0.0005;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2341193 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2341277 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8500;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2341485 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9460;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2341818 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2341859 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2341916 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0021;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2341919 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2341952 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0091;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0009;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2342093 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8685;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2342118 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9865;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2342150 . TCTAGGG T 173 PASS INDEL;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5827;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2342157 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8413;ERATE=0.0003;THETA=0.0021;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2342160 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8739;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2342182 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9863;ERATE=0.0003;THETA=0.0021;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2342421 . TCTC T 679 PASS INDEL;BAVGPOST=0.998;BRSQ=0.864;LDAF=0.0056;AVGPOST=0.9971;RSQ=0.7903;ERATE=0.0004;THETA=0.0011;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2342433 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9072;ERATE=0.0003;THETA=0.0042;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2342435 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8259;ERATE=0.0003;THETA=0.0019;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2342449 . TCCA T 399 PASS INDEL;BAVGPOST=0.999;BRSQ=0.743;LDAF=0.0046;AVGPOST=0.9944;RSQ=0.6048;ERATE=0.0005;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2342468 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.757;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5782;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2342515 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0019;AVGPOST=0.9994;RSQ=0.8494;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2342567 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0969;AVGPOST=0.9966;RSQ=0.9852;ERATE=0.0004;THETA=0.0038;AC=210;AN=2184 GT:DS:GL:BD 0.09615385 0
1 2342657 . T TG 1694 PASS INDEL;BAVGPOST=0.987;BRSQ=0.934;LDAF=0.0943;AVGPOST=0.9917;RSQ=0.9651;ERATE=0.0007;THETA=0.0017;AC=205;AN=2184 GT:DS:GL:BD 0.09386447 0
1 2342658 . G GA 8880 PASS INDEL;BAVGPOST=0.987;BRSQ=0.935;LDAF=0.0956;AVGPOST=0.9937;RSQ=0.9749;ERATE=0.0004;THETA=0.0016;AC=207;AN=2184 GT:DS:GL:BD 0.09478022 0
1 2342802 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0019;AVGPOST=0.9983;RSQ=0.6940;ERATE=0.0004;THETA=0.0025;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2342860 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.491;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5140;ERATE=0.0004;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2342973 rs77098501 CT C 60 PASS INDEL;BAVGPOST=0.972;BRSQ=0.334;LDAF=0.0435;AVGPOST=0.9362;RSQ=0.4062;ERATE=0.0085;THETA=0.0009;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 2343085 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.763;LDAF=0.0029;AVGPOST=0.9964;RSQ=0.5064;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2343166 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0124;AVGPOST=0.9970;RSQ=0.9128;ERATE=0.0003;THETA=0.0011;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 2343194 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.952;LDAF=0.8950;AVGPOST=0.9624;RSQ=0.8461;ERATE=0.0026;THETA=0.0003;AC=1971;AN=2184 GT:DS:GL:BD 0.90247256 1
1 2343243 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0109;AVGPOST=0.9989;RSQ=0.9584;ERATE=0.0004;THETA=0.0015;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 2343333 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.943;LDAF=0.0124;AVGPOST=0.9936;RSQ=0.7948;ERATE=0.0008;THETA=0.0013;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 2343420 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6077;ERATE=0.0003;THETA=0.0034;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2343454 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0005;AVGPOST=0.9990;RSQ=0.3031;ERATE=0.0005;THETA=0.0041;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 2343493 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0130;AVGPOST=0.9954;RSQ=0.8650;ERATE=0.0007;THETA=0.0046;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 2343687 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.529;LDAF=0.0039;AVGPOST=0.9969;RSQ=0.6508;ERATE=0.0007;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2343741 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0104;AVGPOST=0.9934;RSQ=0.7384;ERATE=0.0005;THETA=0.0049;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2344042 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.300;LDAF=0.0110;AVGPOST=0.9865;RSQ=0.4873;ERATE=0.0014;THETA=0.0103;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2344171 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.182;LDAF=0.0386;AVGPOST=0.9410;RSQ=0.4035;ERATE=0.0031;THETA=0.0005;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 2344449 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.643;LDAF=0.0107;AVGPOST=0.9901;RSQ=0.6361;ERATE=0.0011;THETA=0.0092;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 2344691 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.949;LDAF=0.1370;AVGPOST=0.9741;RSQ=0.9152;ERATE=0.0009;THETA=0.0010;AC=296;AN=2184 GT:DS:GL:BD 0.13553114 0
1 2344925 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.956;LDAF=0.1410;AVGPOST=0.9691;RSQ=0.9050;ERATE=0.0007;THETA=0.0010;AC=297;AN=2184 GT:DS:GL:BD 0.13598901 0
1 2345184 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0058;AVGPOST=0.9994;RSQ=0.9474;ERATE=0.0004;THETA=0.0073;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2345236 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5571;ERATE=0.0004;THETA=0.0090;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2345372 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.554;LDAF=0.0040;AVGPOST=0.9983;RSQ=0.8167;ERATE=0.0004;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2345403 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.576;LDAF=0.0068;AVGPOST=0.9929;RSQ=0.5896;ERATE=0.0010;THETA=0.0035;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2345407 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.760;LDAF=0.0086;AVGPOST=0.9916;RSQ=0.6257;ERATE=0.0012;THETA=0.0069;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2345503 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.948;LDAF=0.0155;AVGPOST=0.9972;RSQ=0.9284;ERATE=0.0003;THETA=0.0122;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 2345534 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9212;ERATE=0.0003;THETA=0.0043;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2345688 . AC A 150 PASS INDEL;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0036;AVGPOST=0.9981;RSQ=0.7688;ERATE=0.0004;THETA=0.0108;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2345757 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.681;LDAF=0.0064;AVGPOST=0.9933;RSQ=0.5986;ERATE=0.0012;THETA=0.0187;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2345894 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.8986;ERATE=0.0004;THETA=0.0132;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2345966 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.768;LDAF=0.0578;AVGPOST=0.9774;RSQ=0.8338;ERATE=0.0015;THETA=0.0096;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 2346017 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.814;LDAF=0.0081;AVGPOST=0.9935;RSQ=0.6705;ERATE=0.0005;THETA=0.0053;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2346040 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0072;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2346063 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.950;LDAF=0.0090;AVGPOST=0.9976;RSQ=0.8886;ERATE=0.0003;THETA=0.0049;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2346099 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.945;BRSQ=0.844;LDAF=0.1862;AVGPOST=0.9430;RSQ=0.8619;ERATE=0.0042;THETA=0.0027;AC=380;AN=2184 GT:DS:GL:BD 0.17399268 0
1 2346160 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0065;AVGPOST=0.9973;RSQ=0.8452;ERATE=0.0004;THETA=0.0052;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2346171 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.771;LDAF=0.0388;AVGPOST=0.9839;RSQ=0.8332;ERATE=0.0013;THETA=0.0052;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 2346357 . ACT A 21 PASS INDEL;BAVGPOST=0.999;BRSQ=0.615;LDAF=0.0026;AVGPOST=0.9967;RSQ=0.4975;ERATE=0.0005;THETA=0.0184;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2346458 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.520;LDAF=0.0176;AVGPOST=0.9803;RSQ=0.5504;ERATE=0.0009;THETA=0.0093;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 2346474 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.580;LDAF=0.0316;AVGPOST=0.9708;RSQ=0.6571;ERATE=0.0016;THETA=0.0109;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 2346476 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.771;LDAF=0.0197;AVGPOST=0.9820;RSQ=0.6639;ERATE=0.0008;THETA=0.0082;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 2346481 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.790;LDAF=0.0207;AVGPOST=0.9782;RSQ=0.5992;ERATE=0.0008;THETA=0.0056;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 2346482 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.853;BRSQ=0.544;LDAF=0.7913;AVGPOST=0.8169;RSQ=0.5524;ERATE=0.0088;THETA=0.0186;AC=1827;AN=2184 GT:DS:GL:BD 0.83653843 1
1 2346523 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.908;BRSQ=0.735;LDAF=0.1704;AVGPOST=0.9177;RSQ=0.7968;ERATE=0.0006;THETA=0.0032;AC=341;AN=2184 GT:DS:GL:BD 0.15613553 0
1 2346524 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.908;BRSQ=0.735;LDAF=0.1739;AVGPOST=0.9133;RSQ=0.7874;ERATE=0.0009;THETA=0.0082;AC=344;AN=2184 GT:DS:GL:BD 0.15750916 0
1 2346559 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.296;LDAF=0.0067;AVGPOST=0.9888;RSQ=0.3162;ERATE=0.0010;THETA=0.0032;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2346574 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.663;LDAF=0.0374;AVGPOST=0.9707;RSQ=0.6864;ERATE=0.0022;THETA=0.0096;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 2346604 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.688;LDAF=0.0066;AVGPOST=0.9911;RSQ=0.4736;ERATE=0.0009;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2346615 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.856;LDAF=0.0375;AVGPOST=0.9803;RSQ=0.8159;ERATE=0.0006;THETA=0.0083;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 2346634 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.770;LDAF=0.0054;AVGPOST=0.9966;RSQ=0.7697;ERATE=0.0003;THETA=0.0024;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2346703 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.812;LDAF=0.0121;AVGPOST=0.9931;RSQ=0.7952;ERATE=0.0006;THETA=0.0073;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 2346752 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.668;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0003;THETA=0.0066;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2346848 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.671;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7566;ERATE=0.0003;THETA=0.0118;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2346944 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.0029;AVGPOST=0.9987;RSQ=0.8310;ERATE=0.0003;THETA=0.0135;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2347038 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.741;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5467;ERATE=0.0003;THETA=0.0071;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2347059 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.866;LDAF=0.0088;AVGPOST=0.9973;RSQ=0.8806;ERATE=0.0004;THETA=0.0060;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2347097 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0069;AVGPOST=0.9971;RSQ=0.8473;ERATE=0.0003;THETA=0.0125;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2347277 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.622;LDAF=0.0046;AVGPOST=0.9966;RSQ=0.7135;ERATE=0.0004;THETA=0.0031;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2347294 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.6423;ERATE=0.0004;THETA=0.0081;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2347328 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7135;ERATE=0.0004;THETA=0.0114;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2347346 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.709;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.7013;ERATE=0.0003;THETA=0.0035;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2347378 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0030;AVGPOST=0.9984;RSQ=0.8264;ERATE=0.0004;THETA=0.0056;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2347450 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0034;AVGPOST=0.9957;RSQ=0.5057;ERATE=0.0004;THETA=0.0054;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2347455 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.744;LDAF=0.0072;AVGPOST=0.9948;RSQ=0.7220;ERATE=0.0006;THETA=0.0127;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2347465 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.925;LDAF=0.0969;AVGPOST=0.9787;RSQ=0.9108;ERATE=0.0009;THETA=0.0093;AC=206;AN=2184 GT:DS:GL:BD 0.09432235 0
1 2347466 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.959;LDAF=0.2049;AVGPOST=0.9837;RSQ=0.9620;ERATE=0.0006;THETA=0.0004;AC=446;AN=2184 GT:DS:GL:BD 0.20421246 0
1 2347491 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.844;LDAF=0.0058;AVGPOST=0.9955;RSQ=0.7003;ERATE=0.0004;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2347499 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.645;LDAF=0.0042;AVGPOST=0.9968;RSQ=0.6988;ERATE=0.0006;THETA=0.0040;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2347502 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0048;AVGPOST=0.9981;RSQ=0.8590;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2347566 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.930;LDAF=0.1569;AVGPOST=0.9734;RSQ=0.9289;ERATE=0.0009;THETA=0.0015;AC=337;AN=2184 GT:DS:GL:BD 0.15430403 0
1 2347576 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.946;LDAF=0.1993;AVGPOST=0.9804;RSQ=0.9543;ERATE=0.0021;THETA=0.0032;AC=425;AN=2184 GT:DS:GL:BD 0.19459707 0
1 2347611 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.566;LDAF=0.0029;AVGPOST=0.9974;RSQ=0.6464;ERATE=0.0005;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2347656 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.848;LDAF=0.0117;AVGPOST=0.9957;RSQ=0.8570;ERATE=0.0007;THETA=0.0047;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 2347667 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.906;LDAF=0.0088;AVGPOST=0.9980;RSQ=0.9163;ERATE=0.0003;THETA=0.0029;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2347732 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.991;LDAF=0.3199;AVGPOST=0.9899;RSQ=0.9829;ERATE=0.0006;THETA=0.0007;AC=695;AN=2184 GT:DS:GL:BD 0.31822345 0
1 2347840 . A ACAGGG 60208 PASS INDEL;BAVGPOST=0.929;BRSQ=0.680;LDAF=0.8311;AVGPOST=0.8527;RSQ=0.5824;ERATE=0.0247;THETA=0.0007;AC=1911;AN=2184 GT:DS:GL:BD 0.87500000 1
1 2347931 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.890;LDAF=0.0258;AVGPOST=0.9957;RSQ=0.9275;ERATE=0.0004;THETA=0.0004;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 2347942 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.909;LDAF=0.0163;AVGPOST=0.9944;RSQ=0.8483;ERATE=0.0005;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 2348040 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.974;LDAF=0.4150;AVGPOST=0.9679;RSQ=0.9564;ERATE=0.0037;THETA=0.0003;AC=906;AN=2184 GT:DS:GL:BD 0.41483516 0
1 2348144 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.758;LDAF=0.0019;AVGPOST=0.9983;RSQ=0.6616;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2348227 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8594;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2348306 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9075;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2348344 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7190;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2348565 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4859;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2348582 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4292;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2348747 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0047;AVGPOST=0.9995;RSQ=0.9495;ERATE=0.0004;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2348849 . C CCAG 15 PASS INDEL;BAVGPOST=0.982;BRSQ=0.312;LDAF=0.0253;AVGPOST=0.9734;RSQ=0.5770;ERATE=0.0014;THETA=0.0005;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 2348852 . G GCCCAGCTT 24548 PASS INDEL;BAVGPOST=0.874;BRSQ=0.757;LDAF=0.3100;AVGPOST=0.8559;RSQ=0.7513;ERATE=0.0125;THETA=0.0009;AC=655;AN=2184 GT:DS:GL:BD 0.29990843 0
1 2348859 rs5772065 T TTCCCAGCC 39762 PASS INDEL;BAVGPOST=0.889;BRSQ=0.789;LDAF=0.3540;AVGPOST=0.8549;RSQ=0.7622;ERATE=0.0207;THETA=0.0004;AC=758;AN=2184 GT:DS:GL:BD 0.34706959 0
1 2348881 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.754;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5717;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2348983 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.898;LDAF=0.0199;AVGPOST=0.9958;RSQ=0.9082;ERATE=0.0004;THETA=0.0005;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 2349112 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7033;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2349162 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0035;AVGPOST=0.9984;RSQ=0.8117;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2349256 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.656;LDAF=0.0041;AVGPOST=0.9969;RSQ=0.6939;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2349345 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.745;LDAF=0.0033;AVGPOST=0.9988;RSQ=0.8251;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2349400 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4699;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2349497 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2349589 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2349670 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5043;ERATE=0.0006;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2349671 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2349734 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5093;ERATE=0.0007;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2349769 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.6584;AVGPOST=0.9964;RSQ=0.9935;ERATE=0.0004;THETA=0.0008;AC=1437;AN=2184 GT:DS:GL:BD 0.65796703 1
1 2349795 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.908;LDAF=0.0056;AVGPOST=0.9980;RSQ=0.8653;ERATE=0.0005;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2349835 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.835;LDAF=0.0063;AVGPOST=0.9976;RSQ=0.8488;ERATE=0.0004;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2349908 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.2097;AVGPOST=0.9883;RSQ=0.9736;ERATE=0.0010;THETA=0.0002;AC=452;AN=2184 GT:DS:GL:BD 0.20695971 0
1 2349909 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0045;AVGPOST=0.9971;RSQ=0.7628;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2349976 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0076;AVGPOST=0.9973;RSQ=0.8644;ERATE=0.0005;THETA=0.0011;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 2349984 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.833;LDAF=0.0097;AVGPOST=0.9957;RSQ=0.8206;ERATE=0.0004;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2350036 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.844;LDAF=0.0051;AVGPOST=0.9986;RSQ=0.8976;ERATE=0.0004;THETA=0.0001;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2350040 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.854;LDAF=0.0038;AVGPOST=0.9986;RSQ=0.8730;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2350169 . TG T 18 PASS INDEL;BAVGPOST=1.000;BRSQ=0.672;LDAF=0.0024;AVGPOST=0.9975;RSQ=0.5948;ERATE=0.0005;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2350178 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.807;LDAF=0.0086;AVGPOST=0.9980;RSQ=0.9122;ERATE=0.0005;THETA=0.0008;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 2350188 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.619;LDAF=0.0027;AVGPOST=0.9973;RSQ=0.5822;ERATE=0.0008;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2350394 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.853;LDAF=0.0049;AVGPOST=0.9959;RSQ=0.6541;ERATE=0.0014;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2350444 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.1967;AVGPOST=0.9968;RSQ=0.9918;ERATE=0.0004;THETA=0.0002;AC=427;AN=2184 GT:DS:GL:BD 0.19551282 0
1 2350464 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.751;LDAF=0.0106;AVGPOST=0.9952;RSQ=0.8117;ERATE=0.0004;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2350467 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0023;AVGPOST=0.9985;RSQ=0.7358;ERATE=0.0004;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2350512 . CT C 1078 PASS INDEL;BAVGPOST=0.995;BRSQ=0.779;LDAF=0.0108;AVGPOST=0.9956;RSQ=0.8372;ERATE=0.0004;THETA=0.0016;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 2350550 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0015;AVGPOST=0.9985;RSQ=0.5926;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2350728 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9369;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2350870 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.625;LDAF=0.0027;AVGPOST=0.9977;RSQ=0.6819;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2350871 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.608;LDAF=0.0046;AVGPOST=0.9948;RSQ=0.5688;ERATE=0.0008;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2350912 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.977;LDAF=0.3424;AVGPOST=0.9843;RSQ=0.9746;ERATE=0.0018;THETA=0.0004;AC=753;AN=2184 GT:DS:GL:BD 0.34478021 0
1 2350919 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0044;AVGPOST=0.9989;RSQ=0.8952;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2350923 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0042;AVGPOST=0.9952;RSQ=0.5412;ERATE=0.0005;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2351083 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.301;LDAF=0.0063;AVGPOST=0.9915;RSQ=0.4569;ERATE=0.0009;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2351096 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.967;LDAF=0.3198;AVGPOST=0.9751;RSQ=0.9576;ERATE=0.0026;THETA=0.0004;AC=698;AN=2184 GT:DS:GL:BD 0.31959707 0
1 2351334 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.567;LDAF=0.0060;AVGPOST=0.9961;RSQ=0.7547;ERATE=0.0005;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2351349 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.733;LDAF=0.0059;AVGPOST=0.9947;RSQ=0.6913;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2351395 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.959;BRSQ=0.903;LDAF=0.1947;AVGPOST=0.9716;RSQ=0.9386;ERATE=0.0010;THETA=0.0002;AC=424;AN=2184 GT:DS:GL:BD 0.19413920 0
1 2351395 . G GC 51 PASS INDEL;BAVGPOST=0.954;BRSQ=0.301;LDAF=0.0879;AVGPOST=0.8787;RSQ=0.4015;ERATE=0.0092;THETA=0.0003;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 2351400 . GT G 105 PASS INDEL;BAVGPOST=0.927;BRSQ=0.229;LDAF=0.0894;AVGPOST=0.8742;RSQ=0.4003;ERATE=0.0083;THETA=0.0002;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 2351410 . CA C 6650 PASS INDEL;BAVGPOST=0.961;BRSQ=0.170;LDAF=0.9139;AVGPOST=0.8625;RSQ=0.3045;ERATE=0.0090;THETA=0.0004;AC=2099;AN=2184 GT:DS:GL:BD 0.96108061 1
1 2351575 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3494;AVGPOST=0.9943;RSQ=0.9910;ERATE=0.0006;THETA=0.0008;AC=762;AN=2184 GT:DS:GL:BD 0.34890109 0
1 2351699 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.3592;AVGPOST=0.9973;RSQ=0.9955;ERATE=0.0005;THETA=0.0002;AC=784;AN=2184 GT:DS:GL:BD 0.35897437 0
1 2351768 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.845;LDAF=0.0044;AVGPOST=0.9979;RSQ=0.8065;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2351879 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.952;LDAF=0.2022;AVGPOST=0.9882;RSQ=0.9737;ERATE=0.0011;THETA=0.0003;AC=440;AN=2184 GT:DS:GL:BD 0.20146520 0
1 2352009 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0113;AVGPOST=0.9963;RSQ=0.8845;ERATE=0.0004;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 2352146 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.2017;AVGPOST=0.9957;RSQ=0.9907;ERATE=0.0005;THETA=0.0003;AC=440;AN=2184 GT:DS:GL:BD 0.20146520 0
1 2352192 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.737;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5975;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2352280 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.2242;AVGPOST=0.9926;RSQ=0.9847;ERATE=0.0027;THETA=0.0002;AC=484;AN=2184 GT:DS:GL:BD 0.22161172 0
1 2352329 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0048;AVGPOST=0.9993;RSQ=0.9336;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2352347 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9133;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2352360 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9090;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2352518 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0024;AVGPOST=0.9984;RSQ=0.7266;ERATE=0.0006;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2352540 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.941;LDAF=0.0186;AVGPOST=0.9970;RSQ=0.9337;ERATE=0.0005;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 2352572 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.701;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8462;ERATE=0.0004;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2352601 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.747;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5861;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2352692 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.822;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2352717 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0017;AVGPOST=0.9995;RSQ=0.8878;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2352952 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.969;LDAF=0.0139;AVGPOST=0.9978;RSQ=0.9371;ERATE=0.0004;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2353085 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3730;AVGPOST=0.9972;RSQ=0.9958;ERATE=0.0004;THETA=0.0005;AC=814;AN=2184 GT:DS:GL:BD 0.37271062 0
1 2353116 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.961;LDAF=0.0137;AVGPOST=0.9981;RSQ=0.9472;ERATE=0.0003;THETA=0.0002;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 2353129 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7995;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2353279 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0021;AVGPOST=0.9983;RSQ=0.6955;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2353295 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.3558;AVGPOST=0.9973;RSQ=0.9956;ERATE=0.0004;THETA=0.0003;AC=777;AN=2184 GT:DS:GL:BD 0.35576922 0
1 2353369 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.981;LDAF=0.0537;AVGPOST=0.9968;RSQ=0.9765;ERATE=0.0004;THETA=0.0002;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 2353421 . A AAGAAG 24118 PASS INDEL;BAVGPOST=0.925;BRSQ=0.811;LDAF=0.2882;AVGPOST=0.9049;RSQ=0.8122;ERATE=0.0275;THETA=0.0002;AC=622;AN=2184 GT:DS:GL:BD 0.28479853 0
1 2353457 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0038;AVGPOST=0.9963;RSQ=0.5990;ERATE=0.0008;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2353470 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6720;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2353656 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.969;LDAF=0.1959;AVGPOST=0.9938;RSQ=0.9845;ERATE=0.0008;THETA=0.0003;AC=427;AN=2184 GT:DS:GL:BD 0.19551282 0
1 2353664 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.970;LDAF=0.1945;AVGPOST=0.9967;RSQ=0.9921;ERATE=0.0003;THETA=0.0003;AC=425;AN=2184 GT:DS:GL:BD 0.19459707 0
1 2353704 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2045;AVGPOST=0.9974;RSQ=0.9935;ERATE=0.0004;THETA=0.0004;AC=446;AN=2184 GT:DS:GL:BD 0.20421246 0
1 2353766 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2353792 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6902;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2353830 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0163;AVGPOST=0.9993;RSQ=0.9825;ERATE=0.0003;THETA=0.0005;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 2353863 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.794;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7694;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2353868 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5052;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2353869 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3637;AVGPOST=0.9966;RSQ=0.9942;ERATE=0.0007;THETA=0.0003;AC=795;AN=2184 GT:DS:GL:BD 0.36401099 0
1 2353972 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0151;AVGPOST=0.9974;RSQ=0.9229;ERATE=0.0003;THETA=0.0009;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 2353978 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6707;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2354016 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.1485;AVGPOST=0.9984;RSQ=0.9946;ERATE=0.0005;THETA=0.0019;AC=324;AN=2184 GT:DS:GL:BD 0.14835165 0
1 2354265 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.7052;ERATE=0.0004;THETA=0.0034;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2354370 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.3217;AVGPOST=0.9935;RSQ=0.9893;ERATE=0.0004;THETA=0.0007;AC=702;AN=2184 GT:DS:GL:BD 0.32142857 0
1 2354390 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.638;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6432;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2354400 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.983;LDAF=0.1408;AVGPOST=0.9969;RSQ=0.9919;ERATE=0.0004;THETA=0.0019;AC=306;AN=2184 GT:DS:GL:BD 0.14010990 0
1 2354563 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1418;AVGPOST=0.9978;RSQ=0.9928;ERATE=0.0004;THETA=0.0012;AC=309;AN=2184 GT:DS:GL:BD 0.14148352 0
1 2354604 . GT G 19 PASS INDEL;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6464;ERATE=0.0004;THETA=0.0071;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2354628 . G GT 8 PASS INDEL;BAVGPOST=0.993;BRSQ=0.464;LDAF=0.0058;AVGPOST=0.9936;RSQ=0.5634;ERATE=0.0010;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2354685 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5853;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2354696 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0024;AVGPOST=0.9983;RSQ=0.7324;ERATE=0.0004;THETA=0.0051;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2354711 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.723;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.7032;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2354885 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.795;LDAF=0.0049;AVGPOST=0.9972;RSQ=0.7654;ERATE=0.0021;THETA=0.0036;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2354886 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.966;LDAF=0.5702;AVGPOST=0.9702;RSQ=0.9574;ERATE=0.0095;THETA=0.0022;AC=1247;AN=2184 GT:DS:GL:BD 0.57097071 1
1 2354925 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8985;ERATE=0.0004;THETA=0.0017;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2355161 . G GT 1090 PASS INDEL;BAVGPOST=0.998;BRSQ=0.938;LDAF=0.0128;AVGPOST=0.9971;RSQ=0.9344;ERATE=0.0005;THETA=0.0077;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 2355162 . G GCAGTA 833 PASS INDEL;BAVGPOST=0.998;BRSQ=0.937;LDAF=0.0245;AVGPOST=0.9853;RSQ=0.8028;ERATE=0.0008;THETA=0.0110;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 2355200 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8395;ERATE=0.0003;THETA=0.0118;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2355223 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.971;LDAF=0.1971;AVGPOST=0.9920;RSQ=0.9811;ERATE=0.0006;THETA=0.0123;AC=429;AN=2184 GT:DS:GL:BD 0.19642857 0
1 2355400 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.949;LDAF=0.2064;AVGPOST=0.9822;RSQ=0.9609;ERATE=0.0006;THETA=0.0069;AC=447;AN=2184 GT:DS:GL:BD 0.20467032 0
1 2355481 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0071;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2355563 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.984;LDAF=0.1900;AVGPOST=0.9931;RSQ=0.9827;ERATE=0.0008;THETA=0.0074;AC=411;AN=2184 GT:DS:GL:BD 0.18818681 0
1 2355588 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2355692 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8460;ERATE=0.0003;THETA=0.0093;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2355737 rs112249140 TA T 35816 PASS INDEL;BAVGPOST=0.970;BRSQ=0.955;LDAF=0.5733;AVGPOST=0.9632;RSQ=0.9482;ERATE=0.0012;THETA=0.0006;AC=1261;AN=2184 GT:DS:GL:BD 0.57738096 1
1 2355742 rs71574354 AAT A 28130 PASS INDEL;BAVGPOST=0.963;BRSQ=0.947;LDAF=0.5610;AVGPOST=0.9459;RSQ=0.9253;ERATE=0.0069;THETA=0.0114;AC=1239;AN=2184 GT:DS:GL:BD 0.56730771 1
1 2355839 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.956;LDAF=0.1147;AVGPOST=0.9880;RSQ=0.9556;ERATE=0.0008;THETA=0.0074;AC=249;AN=2184 GT:DS:GL:BD 0.11401099 0
1 2355916 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.980;LDAF=0.6125;AVGPOST=0.9845;RSQ=0.9763;ERATE=0.0036;THETA=0.0075;AC=1337;AN=2184 GT:DS:GL:BD 0.61217946 1
1 2356110 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.972;LDAF=0.1202;AVGPOST=0.9897;RSQ=0.9595;ERATE=0.0006;THETA=0.0024;AC=257;AN=2184 GT:DS:GL:BD 0.11767399 0
1 2356147 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0217;AVGPOST=0.9943;RSQ=0.8930;ERATE=0.0007;THETA=0.0009;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 2356149 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.900;LDAF=0.0080;AVGPOST=0.9967;RSQ=0.8316;ERATE=0.0004;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2356152 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.965;LDAF=0.1690;AVGPOST=0.9863;RSQ=0.9635;ERATE=0.0014;THETA=0.0056;AC=363;AN=2184 GT:DS:GL:BD 0.16620879 0
1 2356164 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.800;LDAF=0.0239;AVGPOST=0.9887;RSQ=0.8402;ERATE=0.0007;THETA=0.0077;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 2356193 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.795;LDAF=0.0177;AVGPOST=0.9866;RSQ=0.7117;ERATE=0.0014;THETA=0.0031;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 2356197 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.645;LDAF=0.0037;AVGPOST=0.9942;RSQ=0.3868;ERATE=0.0009;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2356201 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.722;LDAF=0.0100;AVGPOST=0.9927;RSQ=0.7388;ERATE=0.0006;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 2356234 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.492;LDAF=0.0062;AVGPOST=0.9908;RSQ=0.3738;ERATE=0.0013;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2356243 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.671;LDAF=0.0073;AVGPOST=0.9938;RSQ=0.6640;ERATE=0.0012;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2356270 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.602;LDAF=0.0094;AVGPOST=0.9902;RSQ=0.5918;ERATE=0.0009;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2356277 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.704;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.3592;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2356432 . C CA 92 PASS INDEL;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0017;AVGPOST=0.9982;RSQ=0.5073;ERATE=0.0007;THETA=0.0025;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2356549 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.949;LDAF=0.0276;AVGPOST=0.9937;RSQ=0.9163;ERATE=0.0006;THETA=0.0003;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 2356577 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.982;LDAF=0.6795;AVGPOST=0.9888;RSQ=0.9800;ERATE=0.0007;THETA=0.0004;AC=1483;AN=2184 GT:DS:GL:BD 0.67902929 1
1 2356585 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.713;LDAF=0.0026;AVGPOST=0.9978;RSQ=0.6251;ERATE=0.0005;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2356678 . CAT C 3200 PASS INDEL;BAVGPOST=0.992;BRSQ=0.899;LDAF=0.0269;AVGPOST=0.9949;RSQ=0.9378;ERATE=0.0003;THETA=0.0005;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 2356685 . AAC A 323 PASS INDEL;BAVGPOST=0.994;BRSQ=0.801;LDAF=0.0125;AVGPOST=0.9950;RSQ=0.8625;ERATE=0.0004;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 2356695 . TAC T 361 PASS INDEL;BAVGPOST=0.994;BRSQ=0.835;LDAF=0.0136;AVGPOST=0.9948;RSQ=0.8714;ERATE=0.0005;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 2356709 . TAC T 2462 PASS INDEL;BAVGPOST=0.997;BRSQ=0.958;LDAF=0.0280;AVGPOST=0.9987;RSQ=0.9817;ERATE=0.0004;THETA=0.0045;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 2356772 . AC A 239 PASS INDEL;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0102;AVGPOST=0.9968;RSQ=0.8857;ERATE=0.0005;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 2356778 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2356843 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.781;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8441;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2356912 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.6768;AVGPOST=0.9975;RSQ=0.9955;ERATE=0.0004;THETA=0.0007;AC=1477;AN=2184 GT:DS:GL:BD 0.67628205 1
1 2356958 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2357159 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0039;AVGPOST=0.9963;RSQ=0.6247;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2357285 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2357342 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6432;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2357367 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.845;LDAF=0.0108;AVGPOST=0.9964;RSQ=0.8669;ERATE=0.0004;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 2357418 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0280;AVGPOST=0.9998;RSQ=0.9973;ERATE=0.0003;THETA=0.0001;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 2357475 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9994;AVGPOST=0.9989;RSQ=0.2612;ERATE=0.0003;THETA=0.0004;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 2357477 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0088;AVGPOST=0.9997;RSQ=0.9863;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 2357575 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0034;AVGPOST=0.9987;RSQ=0.8578;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2357591 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7022;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2357731 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2357810 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1561;AVGPOST=0.9967;RSQ=0.9898;ERATE=0.0007;THETA=0.0011;AC=342;AN=2184 GT:DS:GL:BD 0.15659341 0
1 2357832 . A AG 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.716;LDAF=0.0022;AVGPOST=0.9970;RSQ=0.4507;ERATE=0.0005;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2357957 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.602;LDAF=0.0053;AVGPOST=0.9949;RSQ=0.6159;ERATE=0.0006;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2358029 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0038;AVGPOST=0.9966;RSQ=0.6869;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2358071 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.695;LDAF=0.0033;AVGPOST=0.9981;RSQ=0.7581;ERATE=0.0006;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2358073 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.982;LDAF=0.5587;AVGPOST=0.9682;RSQ=0.9500;ERATE=0.0074;THETA=0.0004;AC=1225;AN=2184 GT:DS:GL:BD 0.56089741 1
1 2358092 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.1682;AVGPOST=0.9933;RSQ=0.9810;ERATE=0.0006;THETA=0.0004;AC=364;AN=2184 GT:DS:GL:BD 0.16666667 0
1 2358204 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0088;AVGPOST=0.9995;RSQ=0.9773;ERATE=0.0003;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 2358402 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.898;LDAF=0.0212;AVGPOST=0.9947;RSQ=0.9049;ERATE=0.0004;THETA=0.0002;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 2358485 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0052;AVGPOST=0.9996;RSQ=0.9619;ERATE=0.0004;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2358521 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.681;LDAF=0.0039;AVGPOST=0.9968;RSQ=0.7033;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2358581 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0147;AVGPOST=0.9998;RSQ=0.9936;ERATE=0.0003;THETA=0.0002;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 2358672 . TG T 1242 PASS INDEL;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0298;AVGPOST=0.9978;RSQ=0.9702;ERATE=0.0008;THETA=0.0002;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 2358755 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.946;LDAF=0.3168;AVGPOST=0.9840;RSQ=0.9716;ERATE=0.0009;THETA=0.0005;AC=691;AN=2184 GT:DS:GL:BD 0.31639194 0
1 2358758 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.934;LDAF=0.6509;AVGPOST=0.9261;RSQ=0.8735;ERATE=0.0108;THETA=0.0002;AC=1444;AN=2184 GT:DS:GL:BD 0.66117215 1
1 2358848 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.1784;AVGPOST=0.9965;RSQ=0.9913;ERATE=0.0004;THETA=0.0005;AC=389;AN=2184 GT:DS:GL:BD 0.17811355 0
1 2358871 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0064;AVGPOST=0.9976;RSQ=0.8570;ERATE=0.0005;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2358944 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.987;LDAF=0.3502;AVGPOST=0.9922;RSQ=0.9871;ERATE=0.0008;THETA=0.0002;AC=764;AN=2184 GT:DS:GL:BD 0.34981686 0
1 2359033 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.713;LDAF=0.0020;AVGPOST=0.9977;RSQ=0.5414;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2359251 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.951;LDAF=0.1486;AVGPOST=0.9830;RSQ=0.9486;ERATE=0.0012;THETA=0.0003;AC=322;AN=2184 GT:DS:GL:BD 0.14743590 0
1 2359258 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.663;LDAF=0.0022;AVGPOST=0.9966;RSQ=0.3366;ERATE=0.0006;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2359280 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.989;LDAF=0.1452;AVGPOST=0.9879;RSQ=0.9644;ERATE=0.0012;THETA=0.0002;AC=307;AN=2184 GT:DS:GL:BD 0.14056776 0
1 2359292 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0068;AVGPOST=0.9957;RSQ=0.7551;ERATE=0.0006;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2359462 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.784;LDAF=0.0036;AVGPOST=0.9984;RSQ=0.8027;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2359626 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9764;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2359658 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0105;AVGPOST=0.9981;RSQ=0.9223;ERATE=0.0005;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 2359726 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.636;LDAF=0.0028;AVGPOST=0.9977;RSQ=0.6233;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2359755 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.850;LDAF=0.0039;AVGPOST=0.9974;RSQ=0.7187;ERATE=0.0005;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2359862 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2899;AVGPOST=0.9901;RSQ=0.9802;ERATE=0.0013;THETA=0.0004;AC=630;AN=2184 GT:DS:GL:BD 0.28846154 0
1 2359906 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0126;AVGPOST=0.9990;RSQ=0.9706;ERATE=0.0003;THETA=0.0002;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 2359917 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.957;LDAF=0.7250;AVGPOST=0.9769;RSQ=0.9569;ERATE=0.0008;THETA=0.0003;AC=1585;AN=2184 GT:DS:GL:BD 0.72573262 1
1 2359940 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.980;LDAF=0.1791;AVGPOST=0.9954;RSQ=0.9888;ERATE=0.0006;THETA=0.0004;AC=388;AN=2184 GT:DS:GL:BD 0.17765568 0
1 2359981 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.1214;AVGPOST=0.9943;RSQ=0.9779;ERATE=0.0010;THETA=0.0003;AC=263;AN=2184 GT:DS:GL:BD 0.12042125 0
1 2360159 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.947;LDAF=0.0276;AVGPOST=0.9939;RSQ=0.9182;ERATE=0.0005;THETA=0.0007;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 2360228 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0054;AVGPOST=0.9967;RSQ=0.7520;ERATE=0.0006;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2360244 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.791;LDAF=0.0038;AVGPOST=0.9968;RSQ=0.7026;ERATE=0.0005;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2360279 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.663;LDAF=0.0028;AVGPOST=0.9972;RSQ=0.5590;ERATE=0.0006;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2360342 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.924;LDAF=0.0270;AVGPOST=0.9921;RSQ=0.8906;ERATE=0.0003;THETA=0.0007;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 2360375 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0050;AVGPOST=0.9977;RSQ=0.8237;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2360442 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0307;AVGPOST=0.9970;RSQ=0.9632;ERATE=0.0005;THETA=0.0005;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 2360452 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.732;LDAF=0.0020;AVGPOST=0.9978;RSQ=0.5364;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2360589 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0097;AVGPOST=0.9949;RSQ=0.7881;ERATE=0.0004;THETA=0.0001;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2360653 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.972;LDAF=0.1430;AVGPOST=0.9877;RSQ=0.9621;ERATE=0.0011;THETA=0.0005;AC=311;AN=2184 GT:DS:GL:BD 0.14239927 0
1 2360656 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.729;LDAF=0.0102;AVGPOST=0.9948;RSQ=0.7866;ERATE=0.0008;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2360820 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.3122;AVGPOST=0.9958;RSQ=0.9920;ERATE=0.0005;THETA=0.0003;AC=681;AN=2184 GT:DS:GL:BD 0.31181318 0
1 2360881 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.916;LDAF=0.0323;AVGPOST=0.9952;RSQ=0.9459;ERATE=0.0004;THETA=0.0003;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 2360899 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7114;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2361051 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.845;LDAF=0.0025;AVGPOST=0.9993;RSQ=0.8723;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2361064 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.828;LDAF=0.0024;AVGPOST=0.9985;RSQ=0.7127;ERATE=0.0007;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2361104 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6947;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2361128 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0038;AVGPOST=0.9991;RSQ=0.8956;ERATE=0.0004;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2361132 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1863;AVGPOST=0.9961;RSQ=0.9901;ERATE=0.0008;THETA=0.0004;AC=406;AN=2184 GT:DS:GL:BD 0.18589744 0
1 2361217 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8618;ERATE=0.0005;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2361309 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.983;LDAF=0.4959;AVGPOST=0.9876;RSQ=0.9814;ERATE=0.0012;THETA=0.0006;AC=1078;AN=2184 GT:DS:GL:BD 0.49358973 0
1 2361482 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0028;AVGPOST=0.9986;RSQ=0.7893;ERATE=0.0005;THETA=0.0031;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2361640 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.985;LDAF=0.6629;AVGPOST=0.9931;RSQ=0.9874;ERATE=0.0009;THETA=0.0004;AC=1448;AN=2184 GT:DS:GL:BD 0.66300368 1
1 2361666 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.980;LDAF=0.2090;AVGPOST=0.9924;RSQ=0.9845;ERATE=0.0005;THETA=0.0001;AC=454;AN=2184 GT:DS:GL:BD 0.20787546 0
1 2361799 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.791;LDAF=0.0096;AVGPOST=0.9963;RSQ=0.8401;ERATE=0.0004;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 2361811 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.3772;ERATE=0.0008;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2361832 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.982;LDAF=0.1267;AVGPOST=0.9941;RSQ=0.9781;ERATE=0.0008;THETA=0.0006;AC=277;AN=2184 GT:DS:GL:BD 0.12683150 0
1 2361890 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.560;LDAF=0.0049;AVGPOST=0.9951;RSQ=0.6130;ERATE=0.0006;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2361969 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.630;LDAF=0.0033;AVGPOST=0.9970;RSQ=0.6261;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2362001 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.847;LDAF=0.0474;AVGPOST=0.9825;RSQ=0.8542;ERATE=0.0006;THETA=0.0002;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 2362020 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.991;LDAF=0.3173;AVGPOST=0.9920;RSQ=0.9848;ERATE=0.0007;THETA=0.0006;AC=690;AN=2184 GT:DS:GL:BD 0.31593406 0
1 2362119 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.622;LDAF=0.0019;AVGPOST=0.9970;RSQ=0.4597;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2362154 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.813;LDAF=0.0237;AVGPOST=0.9920;RSQ=0.8667;ERATE=0.0006;THETA=0.0005;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 2362257 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.797;LDAF=0.0051;AVGPOST=0.9961;RSQ=0.6908;ERATE=0.0010;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2362274 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.870;LDAF=0.0039;AVGPOST=0.9982;RSQ=0.8158;ERATE=0.0004;THETA=0.0001;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2362369 . T TG 25 PASS INDEL;BAVGPOST=0.997;BRSQ=0.646;LDAF=0.0044;AVGPOST=0.9964;RSQ=0.6573;ERATE=0.0007;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2362384 . GA G 148 PASS INDEL;BAVGPOST=0.999;BRSQ=0.770;LDAF=0.0034;AVGPOST=0.9987;RSQ=0.8238;ERATE=0.0006;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2362527 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9143;ERATE=0.0004;THETA=0.0001;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2362586 . CGT C 25937 PASS INDEL;BAVGPOST=0.957;BRSQ=0.355;LDAF=0.9343;AVGPOST=0.9138;RSQ=0.4474;ERATE=0.0114;THETA=0.0005;AC=2094;AN=2184 GT:DS:GL:BD 0.95879120 1
1 2362617 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4231;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2362618 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0021;AVGPOST=0.9976;RSQ=0.5600;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2362625 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.605;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7517;ERATE=0.0004;THETA=0.0022;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2362690 . AGCGTGTGT A 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.688;LDAF=0.0029;AVGPOST=0.9955;RSQ=0.3583;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2362692 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0065;AVGPOST=0.9971;RSQ=0.8055;ERATE=0.0008;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2362697 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.764;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4855;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2362708 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.844;LDAF=0.0090;AVGPOST=0.9945;RSQ=0.7589;ERATE=0.0010;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2362764 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.3105;AVGPOST=0.9923;RSQ=0.9857;ERATE=0.0010;THETA=0.0004;AC=677;AN=2184 GT:DS:GL:BD 0.30998167 0
1 2362827 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.3070;AVGPOST=0.9922;RSQ=0.9859;ERATE=0.0005;THETA=0.0004;AC=667;AN=2184 GT:DS:GL:BD 0.30540293 0
1 2362911 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.572;LDAF=0.0027;AVGPOST=0.9971;RSQ=0.5233;ERATE=0.0008;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2362981 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.827;LDAF=0.0051;AVGPOST=0.9976;RSQ=0.8176;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2363045 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.620;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.5703;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2363111 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.651;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2363119 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.871;LDAF=0.0081;AVGPOST=0.9978;RSQ=0.8968;ERATE=0.0004;THETA=0.0007;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2363221 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0034;AVGPOST=0.9992;RSQ=0.9094;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2363227 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.719;LDAF=0.0042;AVGPOST=0.9985;RSQ=0.8423;ERATE=0.0003;THETA=0.0022;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2363289 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5239;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2363327 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.978;LDAF=0.6463;AVGPOST=0.9884;RSQ=0.9798;ERATE=0.0010;THETA=0.0008;AC=1412;AN=2184 GT:DS:GL:BD 0.64652014 1
1 2363421 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.983;LDAF=0.1164;AVGPOST=0.9916;RSQ=0.9684;ERATE=0.0004;THETA=0.0012;AC=255;AN=2184 GT:DS:GL:BD 0.11675824 0
1 2363462 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5951;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2363560 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.743;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6003;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2363609 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.858;LDAF=0.0079;AVGPOST=0.9978;RSQ=0.8861;ERATE=0.0004;THETA=0.0024;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2363740 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.674;LDAF=0.0025;AVGPOST=0.9991;RSQ=0.8806;ERATE=0.0003;THETA=0.0043;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2363913 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5421;ERATE=0.0004;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2364048 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.506;LDAF=0.0031;AVGPOST=0.9959;RSQ=0.4353;ERATE=0.0008;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2364059 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.392;LDAF=0.0058;AVGPOST=0.9933;RSQ=0.5459;ERATE=0.0010;THETA=0.0028;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2364148 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.675;LDAF=0.0040;AVGPOST=0.9958;RSQ=0.5896;ERATE=0.0007;THETA=0.0021;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2364167 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.638;LDAF=0.0054;AVGPOST=0.9941;RSQ=0.5566;ERATE=0.0005;THETA=0.0015;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2364173 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.712;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5110;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2364197 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.614;LDAF=0.0073;AVGPOST=0.9935;RSQ=0.6203;ERATE=0.0007;THETA=0.0018;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2364260 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.900;LDAF=0.0083;AVGPOST=0.9958;RSQ=0.8151;ERATE=0.0008;THETA=0.0009;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2364271 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.641;LDAF=0.0019;AVGPOST=0.9975;RSQ=0.4345;ERATE=0.0004;THETA=0.0071;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2364293 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.705;LDAF=0.0074;AVGPOST=0.9947;RSQ=0.7548;ERATE=0.0005;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2364372 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.700;LDAF=0.0042;AVGPOST=0.9955;RSQ=0.6348;ERATE=0.0004;THETA=0.0090;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2364386 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7715;ERATE=0.0004;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2364508 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.926;LDAF=0.2082;AVGPOST=0.9659;RSQ=0.9190;ERATE=0.0005;THETA=0.0055;AC=448;AN=2184 GT:DS:GL:BD 0.20512821 0
1 2364535 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.649;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.3944;ERATE=0.0005;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2364612 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7740;ERATE=0.0004;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2364632 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.577;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.5678;ERATE=0.0004;THETA=0.0055;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2364662 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9490;ERATE=0.0004;THETA=0.0024;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2364672 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.854;LDAF=0.0072;AVGPOST=0.9966;RSQ=0.8226;ERATE=0.0007;THETA=0.0062;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2364840 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5552;ERATE=0.0004;THETA=0.0102;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2364843 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.875;LDAF=0.0246;AVGPOST=0.9906;RSQ=0.8343;ERATE=0.0006;THETA=0.0080;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 2364904 . TGC T 71 PASS INDEL;BAVGPOST=0.999;BRSQ=0.737;LDAF=0.0049;AVGPOST=0.9961;RSQ=0.6816;ERATE=0.0006;THETA=0.0032;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2364912 . T TTC 91 PASS INDEL;BAVGPOST=0.999;BRSQ=0.737;LDAF=0.0043;AVGPOST=0.9974;RSQ=0.7446;ERATE=0.0005;THETA=0.0104;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2364913 . A AGGGC 214 PASS INDEL;BAVGPOST=0.999;BRSQ=0.735;LDAF=0.0029;AVGPOST=0.9984;RSQ=0.7713;ERATE=0.0004;THETA=0.0104;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2364961 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.653;LDAF=0.0009;AVGPOST=0.9983;RSQ=0.2237;ERATE=0.0004;THETA=0.0073;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 2364990 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.801;LDAF=0.0057;AVGPOST=0.9968;RSQ=0.7665;ERATE=0.0005;THETA=0.0191;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2365004 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.798;LDAF=0.0134;AVGPOST=0.9946;RSQ=0.8287;ERATE=0.0003;THETA=0.0011;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 2365064 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.663;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7332;ERATE=0.0003;THETA=0.0108;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2365077 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0007;AVGPOST=0.9991;RSQ=0.4025;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2365091 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.769;LDAF=0.0025;AVGPOST=0.9989;RSQ=0.8094;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2365191 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7966;ERATE=0.0003;THETA=0.0122;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2365215 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.717;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0004;THETA=0.0038;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2365329 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.786;LDAF=0.0044;AVGPOST=0.9971;RSQ=0.7551;ERATE=0.0005;THETA=0.0058;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2365377 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0012;AVGPOST=0.9982;RSQ=0.3911;ERATE=0.0006;THETA=0.0036;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2365379 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.688;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.6103;ERATE=0.0005;THETA=0.0098;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2365467 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5436;ERATE=0.0003;THETA=0.0037;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2365475 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.703;LDAF=0.0032;AVGPOST=0.9988;RSQ=0.8323;ERATE=0.0005;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2365491 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0019;AVGPOST=0.9986;RSQ=0.7160;ERATE=0.0003;THETA=0.0080;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2365493 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.5844;ERATE=0.0004;THETA=0.0056;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2365539 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0134;AVGPOST=0.9975;RSQ=0.9159;ERATE=0.0006;THETA=0.0089;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 2365645 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.546;LDAF=0.0025;AVGPOST=0.9963;RSQ=0.3769;ERATE=0.0007;THETA=0.0161;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2365647 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.794;LDAF=0.0061;AVGPOST=0.9961;RSQ=0.7618;ERATE=0.0004;THETA=0.0060;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2365764 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.6858;ERATE=0.0004;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2365847 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.720;LDAF=0.0049;AVGPOST=0.9976;RSQ=0.7846;ERATE=0.0004;THETA=0.0019;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2365885 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.932;BRSQ=0.896;LDAF=0.5822;AVGPOST=0.9380;RSQ=0.9181;ERATE=0.0012;THETA=0.0042;AC=1273;AN=2184 GT:DS:GL:BD 0.58287543 1
1 2366128 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.784;LDAF=0.0143;AVGPOST=0.9928;RSQ=0.8039;ERATE=0.0004;THETA=0.0053;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 2366179 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.753;LDAF=0.0022;AVGPOST=0.9991;RSQ=0.8145;ERATE=0.0003;THETA=0.0073;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2366278 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.714;LDAF=0.0020;AVGPOST=0.9985;RSQ=0.6766;ERATE=0.0005;THETA=0.0032;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2366279 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.898;LDAF=0.0035;AVGPOST=0.9970;RSQ=0.6657;ERATE=0.0004;THETA=0.0070;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2366316 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.928;LDAF=0.1204;AVGPOST=0.9795;RSQ=0.9283;ERATE=0.0008;THETA=0.0064;AC=256;AN=2184 GT:DS:GL:BD 0.11721612 0
1 2366375 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.487;LDAF=0.0035;AVGPOST=0.9954;RSQ=0.4760;ERATE=0.0008;THETA=0.0015;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2366415 rs34090130 AG A 6796 PASS INDEL;BAVGPOST=0.979;BRSQ=0.916;LDAF=0.1295;AVGPOST=0.9681;RSQ=0.8932;ERATE=0.0016;THETA=0.0035;AC=270;AN=2184 GT:DS:GL:BD 0.12362637 0
1 2366486 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0130;AVGPOST=0.9979;RSQ=0.9248;ERATE=0.0005;THETA=0.0020;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 2366517 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.950;LDAF=0.1305;AVGPOST=0.9846;RSQ=0.9549;ERATE=0.0006;THETA=0.0021;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 2366565 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.767;LDAF=0.0147;AVGPOST=0.9948;RSQ=0.8527;ERATE=0.0006;THETA=0.0018;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2366579 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.956;LDAF=0.1281;AVGPOST=0.9859;RSQ=0.9586;ERATE=0.0008;THETA=0.0036;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 2366611 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.929;LDAF=0.1631;AVGPOST=0.9782;RSQ=0.9423;ERATE=0.0007;THETA=0.0026;AC=341;AN=2184 GT:DS:GL:BD 0.15613553 0
1 2366647 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.791;LDAF=0.0043;AVGPOST=0.9972;RSQ=0.7510;ERATE=0.0011;THETA=0.0044;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2366742 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.965;LDAF=0.0194;AVGPOST=0.9947;RSQ=0.9013;ERATE=0.0004;THETA=0.0054;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 2366799 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.755;LDAF=0.0122;AVGPOST=0.9949;RSQ=0.8081;ERATE=0.0005;THETA=0.0047;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 2366893 rs58056215 TGGCTGGA T 11438 PASS INDEL;BAVGPOST=0.865;BRSQ=0.789;LDAF=0.4732;AVGPOST=0.8647;RSQ=0.8193;ERATE=0.0047;THETA=0.0040;AC=1033;AN=2184 GT:DS:GL:BD 0.47298536 0
1 2367012 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.879;LDAF=0.0692;AVGPOST=0.9830;RSQ=0.9051;ERATE=0.0010;THETA=0.0012;AC=144;AN=2184 GT:DS:GL:BD 0.06593407 0
1 2367047 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.853;LDAF=0.0041;AVGPOST=0.9969;RSQ=0.6955;ERATE=0.0006;THETA=0.0056;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2367094 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8314;ERATE=0.0003;THETA=0.0021;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2367096 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2367109 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.821;LDAF=0.0130;AVGPOST=0.9961;RSQ=0.8690;ERATE=0.0005;THETA=0.0015;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 2367246 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0031;AVGPOST=0.9990;RSQ=0.8557;ERATE=0.0004;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2367258 . CT C 752 PASS INDEL;BAVGPOST=0.798;BRSQ=0.526;LDAF=0.1880;AVGPOST=0.8504;RSQ=0.6585;ERATE=0.0014;THETA=0.0031;AC=332;AN=2184 GT:DS:GL:BD 0.15201466 0
1 2367259 rs77469612 TG T 16250 PASS INDEL;BAVGPOST=0.928;BRSQ=0.883;LDAF=0.3714;AVGPOST=0.9385;RSQ=0.9117;ERATE=0.0007;THETA=0.0099;AC=815;AN=2184 GT:DS:GL:BD 0.37316850 0
1 2367329 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4808;ERATE=0.0004;THETA=0.0039;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2367343 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.682;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6220;ERATE=0.0005;THETA=0.0030;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2367360 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5797;ERATE=0.0004;THETA=0.0026;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2367381 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.893;LDAF=0.0153;AVGPOST=0.9940;RSQ=0.8414;ERATE=0.0013;THETA=0.0042;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 2367459 rs111858015 C CT 835 PASS INDEL;BAVGPOST=0.949;BRSQ=0.557;LDAF=0.0825;AVGPOST=0.9165;RSQ=0.5554;ERATE=0.0122;THETA=0.0036;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 2367463 . TCCC T 988 PASS INDEL;BAVGPOST=0.961;BRSQ=0.531;LDAF=0.0641;AVGPOST=0.9318;RSQ=0.5410;ERATE=0.0121;THETA=0.0013;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 2367470 . TC T 191 PASS INDEL;BAVGPOST=0.968;BRSQ=0.396;LDAF=0.0532;AVGPOST=0.9314;RSQ=0.4610;ERATE=0.0069;THETA=0.0046;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 2367616 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.731;LDAF=0.0039;AVGPOST=0.9972;RSQ=0.7021;ERATE=0.0005;THETA=0.0051;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2367660 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.601;LDAF=0.0197;AVGPOST=0.9839;RSQ=0.6747;ERATE=0.0023;THETA=0.0072;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 2367719 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.949;BRSQ=0.636;LDAF=0.0828;AVGPOST=0.9523;RSQ=0.7673;ERATE=0.0010;THETA=0.0081;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 2367729 . CCTTTCCT C 524 PASS INDEL;BAVGPOST=0.977;BRSQ=0.505;LDAF=0.0383;AVGPOST=0.9534;RSQ=0.4806;ERATE=0.0069;THETA=0.0009;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 2367736 . T TC 1340 PASS INDEL;BAVGPOST=0.948;BRSQ=0.553;LDAF=0.0790;AVGPOST=0.9377;RSQ=0.6830;ERATE=0.0042;THETA=0.0142;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 2367775 . CCTCCACCT C 9548 PASS INDEL;BAVGPOST=0.661;BRSQ=0.356;LDAF=0.3959;AVGPOST=0.6972;RSQ=0.4553;ERATE=0.0687;THETA=0.0015;AC=740;AN=2184 GT:DS:GL:BD 0.33882785 0
1 2367784 . TTCCTCCCTTCCTCCC T 849 PASS INDEL;BAVGPOST=0.848;BRSQ=0.166;LDAF=0.1553;AVGPOST=0.8032;RSQ=0.3858;ERATE=0.0099;THETA=0.0038;AC=176;AN=2184 GT:DS:GL:BD 0.08058608 0
1 2367787 . CT C 211 PASS INDEL;BAVGPOST=0.898;BRSQ=0.252;LDAF=0.1192;AVGPOST=0.8360;RSQ=0.3724;ERATE=0.0104;THETA=0.0030;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 2367788 . TC T 196 PASS INDEL;BAVGPOST=0.888;BRSQ=0.238;LDAF=0.1021;AVGPOST=0.8647;RSQ=0.4066;ERATE=0.0087;THETA=0.0021;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 2367900 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.875;BRSQ=0.313;LDAF=0.1588;AVGPOST=0.8096;RSQ=0.4151;ERATE=0.0241;THETA=0.0061;AC=198;AN=2184 GT:DS:GL:BD 0.09065934 0
1 2367908 . T TC 1430 PASS INDEL;BAVGPOST=0.876;BRSQ=0.309;LDAF=0.1411;AVGPOST=0.8407;RSQ=0.4575;ERATE=0.0114;THETA=0.0039;AC=158;AN=2184 GT:DS:GL:BD 0.07234433 0
1 2367909 . C CT 103 PASS INDEL;BAVGPOST=0.904;BRSQ=0.268;LDAF=0.0591;AVGPOST=0.9310;RSQ=0.5060;ERATE=0.0026;THETA=0.0036;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 2367918 . C CT 202 PASS INDEL;BAVGPOST=0.968;BRSQ=0.224;LDAF=0.0436;AVGPOST=0.9434;RSQ=0.4580;ERATE=0.0018;THETA=0.0029;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 2367924 . C CTTT 1012 PASS INDEL;BAVGPOST=0.903;BRSQ=0.219;LDAF=0.1127;AVGPOST=0.8380;RSQ=0.3542;ERATE=0.0129;THETA=0.0018;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 2367938 . CCTCCTTTCCT C 978 PASS INDEL;BAVGPOST=0.906;BRSQ=0.250;LDAF=0.1107;AVGPOST=0.8495;RSQ=0.3900;ERATE=0.0095;THETA=0.0090;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 2367942 . CTTT C 188 PASS INDEL;BAVGPOST=0.929;BRSQ=0.237;LDAF=0.0605;AVGPOST=0.9213;RSQ=0.4583;ERATE=0.0029;THETA=0.0011;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 2368007 . T TC 39 PASS INDEL;BAVGPOST=0.994;BRSQ=0.510;LDAF=0.0136;AVGPOST=0.9804;RSQ=0.4285;ERATE=0.0012;THETA=0.0037;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2368017 . C CT 2470 PASS INDEL;BAVGPOST=0.962;BRSQ=0.630;LDAF=0.0699;AVGPOST=0.9403;RSQ=0.6135;ERATE=0.0146;THETA=0.0070;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 2368072 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.937;LDAF=0.0248;AVGPOST=0.9958;RSQ=0.9352;ERATE=0.0004;THETA=0.0019;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 2368073 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.755;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8123;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2368223 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.890;LDAF=0.0162;AVGPOST=0.9981;RSQ=0.9502;ERATE=0.0004;THETA=0.0010;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 2368224 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.8091;ERATE=0.0004;THETA=0.0033;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2368232 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.958;BRSQ=0.942;LDAF=0.6574;AVGPOST=0.9564;RSQ=0.9392;ERATE=0.0007;THETA=0.0034;AC=1447;AN=2184 GT:DS:GL:BD 0.66254580 1
1 2368250 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.846;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.8670;ERATE=0.0003;THETA=0.0208;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2368310 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4659;ERATE=0.0004;THETA=0.0163;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2368505 . CCT C 108 PASS INDEL;BAVGPOST=0.999;BRSQ=0.688;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6163;ERATE=0.0004;THETA=0.0059;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2368510 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.750;LDAF=0.0027;AVGPOST=0.9964;RSQ=0.4887;ERATE=0.0007;THETA=0.0081;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2368517 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.471;LDAF=0.0029;AVGPOST=0.9979;RSQ=0.7018;ERATE=0.0003;THETA=0.0045;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2368531 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.758;LDAF=0.0046;AVGPOST=0.9984;RSQ=0.8410;ERATE=0.0005;THETA=0.0125;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2368690 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7102;ERATE=0.0003;THETA=0.0082;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2368706 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.939;BRSQ=0.918;LDAF=0.4995;AVGPOST=0.9550;RSQ=0.9445;ERATE=0.0072;THETA=0.0082;AC=1094;AN=2184 GT:DS:GL:BD 0.50091577 1
1 2368775 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.962;BRSQ=0.944;LDAF=0.5731;AVGPOST=0.9659;RSQ=0.9523;ERATE=0.0090;THETA=0.0168;AC=1253;AN=2184 GT:DS:GL:BD 0.57371795 1
1 2368898 rs78347652 CA C 28158 PASS INDEL;BAVGPOST=0.864;BRSQ=0.732;LDAF=0.2878;AVGPOST=0.8739;RSQ=0.7986;ERATE=0.0290;THETA=0.0163;AC=569;AN=2184 GT:DS:GL:BD 0.26053113 0
1 2368912 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0020;AVGPOST=0.9986;RSQ=0.6743;ERATE=0.0015;THETA=0.0139;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2368925 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9396;ERATE=0.0003;THETA=0.0070;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2368949 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7654;ERATE=0.0003;THETA=0.0110;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2369021 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.860;LDAF=0.0449;AVGPOST=0.9819;RSQ=0.8299;ERATE=0.0170;THETA=0.0060;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 2369071 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.857;LDAF=0.0119;AVGPOST=0.9961;RSQ=0.8923;ERATE=0.0003;THETA=0.0040;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 2369130 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.7060;ERATE=0.0003;THETA=0.0080;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2369207 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0005;THETA=0.0076;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2369253 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.865;LDAF=0.0050;AVGPOST=0.9987;RSQ=0.9034;ERATE=0.0007;THETA=0.0180;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2369286 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.905;LDAF=0.0275;AVGPOST=0.9953;RSQ=0.9354;ERATE=0.0004;THETA=0.0167;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 2369315 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8432;ERATE=0.0004;THETA=0.0102;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2369358 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.824;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7177;ERATE=0.0004;THETA=0.0102;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2369375 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.921;LDAF=0.0658;AVGPOST=0.9894;RSQ=0.9323;ERATE=0.0005;THETA=0.0161;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 2369391 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.937;LDAF=0.0870;AVGPOST=0.9891;RSQ=0.9489;ERATE=0.0004;THETA=0.0062;AC=189;AN=2184 GT:DS:GL:BD 0.08653846 0
1 2369408 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.872;LDAF=0.0112;AVGPOST=0.9954;RSQ=0.8478;ERATE=0.0004;THETA=0.0067;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 2369415 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0003;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2369489 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0016;AVGPOST=0.9988;RSQ=0.7592;ERATE=0.0004;THETA=0.0064;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2369498 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.975;LDAF=0.5020;AVGPOST=0.9798;RSQ=0.9718;ERATE=0.0024;THETA=0.0072;AC=1093;AN=2184 GT:DS:GL:BD 0.50045788 1
1 2369638 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.844;LDAF=0.0044;AVGPOST=0.9985;RSQ=0.8534;ERATE=0.0004;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2369647 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0059;AVGPOST=0.9967;RSQ=0.7843;ERATE=0.0004;THETA=0.0031;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2369662 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.742;LDAF=0.0031;AVGPOST=0.9974;RSQ=0.6265;ERATE=0.0008;THETA=0.0018;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2369679 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0159;AVGPOST=0.9986;RSQ=0.9598;ERATE=0.0003;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 2369735 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0020;AVGPOST=0.9975;RSQ=0.4681;ERATE=0.0006;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2369899 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.948;LDAF=0.1329;AVGPOST=0.9895;RSQ=0.9632;ERATE=0.0012;THETA=0.0008;AC=289;AN=2184 GT:DS:GL:BD 0.13232601 0
1 2369965 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.742;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4866;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2370088 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.609;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4689;ERATE=0.0006;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2370200 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0026;AVGPOST=0.9981;RSQ=0.6886;ERATE=0.0005;THETA=0.0017;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2370303 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7802;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2370450 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.969;LDAF=0.0177;AVGPOST=0.9988;RSQ=0.9731;ERATE=0.0003;THETA=0.0007;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 2370513 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.804;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7890;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2370570 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4915;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2371057 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0022;AVGPOST=0.9976;RSQ=0.5884;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2371203 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6263;ERATE=0.0005;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2371267 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.828;LDAF=0.0049;AVGPOST=0.9984;RSQ=0.8702;ERATE=0.0004;THETA=0.0032;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2371299 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.744;LDAF=0.0020;AVGPOST=0.9986;RSQ=0.6790;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2371305 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0177;AVGPOST=0.9989;RSQ=0.9759;ERATE=0.0004;THETA=0.0007;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 2371422 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.980;LDAF=0.0400;AVGPOST=0.9982;RSQ=0.9837;ERATE=0.0004;THETA=0.0005;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 2371426 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.658;LDAF=0.0031;AVGPOST=0.9963;RSQ=0.5412;ERATE=0.0005;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2371562 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.977;LDAF=0.0498;AVGPOST=0.9957;RSQ=0.9677;ERATE=0.0005;THETA=0.0006;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 2371686 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0177;AVGPOST=0.9989;RSQ=0.9758;ERATE=0.0004;THETA=0.0005;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 2371789 . ATGGTGG A 132 PASS INDEL;BAVGPOST=0.998;BRSQ=0.534;LDAF=0.0080;AVGPOST=0.9953;RSQ=0.7611;ERATE=0.0008;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2371819 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.613;LDAF=0.0030;AVGPOST=0.9977;RSQ=0.6448;ERATE=0.0008;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2371985 MERGED_DEL_2_455 CGCTGGCCTTGCCTGGCCCGCCCGGGGATCTTGCATTGCTGCGACCAGTGATCCTCTCTCCATGTCTGTCGCTGGCCTTGCCCGGCCCGCCAGGGGATCTTGCATGCTGCGACCAGGGATCCTCTCTCCATGTCTGTCGCTGGCCTTGGCCGGCCTGCCCGGGGATCTTGCATGCTGCGACCAGGGATTC C . . SV;BAVGPOST=1.000;BRSQ=0;LDAF=0.0002;AVGPOST=0.9996;RSQ=0.0872;ERATE=0.0003;THETA=0.0019;CIEND=-22,131;CIPOS=-41,116;END=2374312;HOMLEN=5;HOMSEQ=GCTGG;SOURCE=BreakDancer_2372252_2374213,Geno GT:DS:GL:BD 0.00000000 0
1 2371998 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.890;BRSQ=0.745;LDAF=0.6599;AVGPOST=0.8230;RSQ=0.6694;ERATE=0.0481;THETA=0.0008;AC=1520;AN=2184 GT:DS:GL:BD 0.69597071 1
1 2372019 rs77708992 AT A 6725 PASS INDEL;BAVGPOST=0.792;BRSQ=0.428;LDAF=0.2809;AVGPOST=0.7790;RSQ=0.5007;ERATE=0.0698;THETA=0.0008;AC=455;AN=2184 GT:DS:GL:BD 0.20833333 0
1 2372259 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7552;ERATE=0.0003;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2372320 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0919;AVGPOST=0.9970;RSQ=0.9860;ERATE=0.0004;THETA=0.0004;AC=201;AN=2184 GT:DS:GL:BD 0.09203297 0
1 2372321 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.3731;AVGPOST=0.9920;RSQ=0.9869;ERATE=0.0008;THETA=0.0023;AC=814;AN=2184 GT:DS:GL:BD 0.37271062 0
1 2372397 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6951;AVGPOST=0.9931;RSQ=0.9879;ERATE=0.0009;THETA=0.0005;AC=1521;AN=2184 GT:DS:GL:BD 0.69642860 1
1 2372434 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.703;LDAF=0.0137;AVGPOST=0.9942;RSQ=0.8416;ERATE=0.0003;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 2372624 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.983;LDAF=0.0483;AVGPOST=0.9976;RSQ=0.9833;ERATE=0.0004;THETA=0.0004;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 2372626 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.981;LDAF=0.0476;AVGPOST=0.9964;RSQ=0.9750;ERATE=0.0005;THETA=0.0004;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 2372763 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0248;AVGPOST=0.9946;RSQ=0.9230;ERATE=0.0010;THETA=0.0007;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 2372766 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.691;LDAF=0.0048;AVGPOST=0.9945;RSQ=0.5547;ERATE=0.0004;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2372858 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.956;LDAF=0.7512;AVGPOST=0.9784;RSQ=0.9630;ERATE=0.0009;THETA=0.0007;AC=1642;AN=2184 GT:DS:GL:BD 0.75183153 1
1 2372874 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0116;AVGPOST=0.9971;RSQ=0.8892;ERATE=0.0008;THETA=0.0007;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 2372940 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.976;LDAF=0.0649;AVGPOST=0.9958;RSQ=0.9756;ERATE=0.0004;THETA=0.0005;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 2372954 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.6958;AVGPOST=0.9977;RSQ=0.9962;ERATE=0.0004;THETA=0.0005;AC=1521;AN=2184 GT:DS:GL:BD 0.69642860 1
1 2372995 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.555;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5628;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2373089 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.3484;AVGPOST=0.9919;RSQ=0.9858;ERATE=0.0010;THETA=0.0003;AC=759;AN=2184 GT:DS:GL:BD 0.34752747 0
1 2373168 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.994;LDAF=0.6952;AVGPOST=0.9951;RSQ=0.9922;ERATE=0.0005;THETA=0.0004;AC=1522;AN=2184 GT:DS:GL:BD 0.69688642 1
1 2373236 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0168;AVGPOST=0.9973;RSQ=0.9364;ERATE=0.0004;THETA=0.0006;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 2373387 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.991;LDAF=0.5386;AVGPOST=0.9774;RSQ=0.9654;ERATE=0.0034;THETA=0.0004;AC=1183;AN=2184 GT:DS:GL:BD 0.54166669 1
1 2373427 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7974;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2373429 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.760;LDAF=0.0032;AVGPOST=0.9978;RSQ=0.7250;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2373543 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.619;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4514;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2373588 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.650;LDAF=0.0079;AVGPOST=0.9948;RSQ=0.7209;ERATE=0.0007;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2373609 rs112894255 CT C 7773 PASS INDEL;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0910;AVGPOST=0.9966;RSQ=0.9836;ERATE=0.0006;THETA=0.0003;AC=199;AN=2184 GT:DS:GL:BD 0.09111722 0
1 2373611 . TG T 684 PASS INDEL;BAVGPOST=0.981;BRSQ=0.889;LDAF=0.0893;AVGPOST=0.9949;RSQ=0.9754;ERATE=0.0005;THETA=0.0005;AC=196;AN=2184 GT:DS:GL:BD 0.08974359 0
1 2373837 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0030;AVGPOST=0.9986;RSQ=0.8452;ERATE=0.0003;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2373856 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.827;LDAF=0.0089;AVGPOST=0.9961;RSQ=0.8173;ERATE=0.0004;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2373987 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1229;AVGPOST=0.9973;RSQ=0.9892;ERATE=0.0005;THETA=0.0007;AC=267;AN=2184 GT:DS:GL:BD 0.12225275 0
1 2374111 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0026;AVGPOST=0.9983;RSQ=0.7557;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2374120 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2981;AVGPOST=0.9974;RSQ=0.9953;ERATE=0.0005;THETA=0.0004;AC=652;AN=2184 GT:DS:GL:BD 0.29853481 0
1 2374129 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7726;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2374304 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.581;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.4778;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2374311 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6712;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2374342 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0160;AVGPOST=0.9986;RSQ=0.9589;ERATE=0.0006;THETA=0.0001;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 2374361 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.807;LDAF=0.0170;AVGPOST=0.9967;RSQ=0.9229;ERATE=0.0004;THETA=0.0005;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 2374374 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0398;AVGPOST=0.9986;RSQ=0.9870;ERATE=0.0004;THETA=0.0009;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 2374431 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1235;AVGPOST=0.9980;RSQ=0.9922;ERATE=0.0005;THETA=0.0006;AC=269;AN=2184 GT:DS:GL:BD 0.12316850 0
1 2374724 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.714;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.3900;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2374758 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.986;LDAF=0.6923;AVGPOST=0.9904;RSQ=0.9851;ERATE=0.0007;THETA=0.0004;AC=1516;AN=2184 GT:DS:GL:BD 0.69413918 1
1 2374792 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1590;AVGPOST=0.9936;RSQ=0.9820;ERATE=0.0004;THETA=0.0010;AC=343;AN=2184 GT:DS:GL:BD 0.15705128 0
1 2374800 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0092;AVGPOST=0.9981;RSQ=0.9228;ERATE=0.0004;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 2374849 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.948;LDAF=0.0205;AVGPOST=0.9904;RSQ=0.8405;ERATE=0.0009;THETA=0.0004;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 2374896 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.935;LDAF=0.1972;AVGPOST=0.9614;RSQ=0.9132;ERATE=0.0027;THETA=0.0003;AC=422;AN=2184 GT:DS:GL:BD 0.19322345 0
1 2375136 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.844;BRSQ=0.416;LDAF=0.1906;AVGPOST=0.9280;RSQ=0.8266;ERATE=0.0039;THETA=0.0004;AC=380;AN=2184 GT:DS:GL:BD 0.17399268 0
1 2375506 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.916;BRSQ=0.853;LDAF=0.5774;AVGPOST=0.8803;RSQ=0.8191;ERATE=0.0139;THETA=0.0013;AC=1273;AN=2184 GT:DS:GL:BD 0.58287543 1
1 2375587 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.1279;AVGPOST=0.9916;RSQ=0.9658;ERATE=0.0011;THETA=0.0005;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 2375791 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.661;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4585;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2375844 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.6715;AVGPOST=0.9836;RSQ=0.9738;ERATE=0.0016;THETA=0.0003;AC=1465;AN=2184 GT:DS:GL:BD 0.67078757 1
1 2375909 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0120;AVGPOST=0.9959;RSQ=0.8590;ERATE=0.0007;THETA=0.0009;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 2375974 . T TG 4937 PASS INDEL;BAVGPOST=0.965;BRSQ=0.926;LDAF=0.2639;AVGPOST=0.9602;RSQ=0.9348;ERATE=0.0006;THETA=0.0004;AC=588;AN=2184 GT:DS:GL:BD 0.26923078 0
1 2375975 rs78539657 G GT 19209 PASS INDEL;BAVGPOST=0.968;BRSQ=0.936;LDAF=0.2963;AVGPOST=0.9829;RSQ=0.9710;ERATE=0.0009;THETA=0.0005;AC=652;AN=2184 GT:DS:GL:BD 0.29853481 0
1 2375976 . T TC 4627 PASS INDEL;BAVGPOST=0.965;BRSQ=0.926;LDAF=0.2637;AVGPOST=0.9597;RSQ=0.9345;ERATE=0.0004;THETA=0.0008;AC=586;AN=2184 GT:DS:GL:BD 0.26831502 0
1 2375978 . T TG 4639 PASS INDEL;BAVGPOST=0.961;BRSQ=0.917;LDAF=0.2606;AVGPOST=0.9553;RSQ=0.9241;ERATE=0.0009;THETA=0.0004;AC=588;AN=2184 GT:DS:GL:BD 0.26923078 0
1 2376017 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0410;AVGPOST=0.9981;RSQ=0.9849;ERATE=0.0003;THETA=0.0003;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 2376046 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.980;LDAF=0.0657;AVGPOST=0.9954;RSQ=0.9748;ERATE=0.0004;THETA=0.0007;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 2376270 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0188;AVGPOST=0.9971;RSQ=0.9506;ERATE=0.0005;THETA=0.0011;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 2376370 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0017;AVGPOST=0.9982;RSQ=0.5595;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2376442 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6963;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2376524 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.759;LDAF=0.0029;AVGPOST=0.9986;RSQ=0.7844;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2376683 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.671;LDAF=0.0051;AVGPOST=0.9963;RSQ=0.7266;ERATE=0.0007;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2376733 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1567;AVGPOST=0.9960;RSQ=0.9883;ERATE=0.0006;THETA=0.0007;AC=341;AN=2184 GT:DS:GL:BD 0.15613553 0
1 2376748 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.557;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4144;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2376895 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.962;LDAF=0.0193;AVGPOST=0.9980;RSQ=0.9617;ERATE=0.0005;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 2377029 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0101;AVGPOST=0.9964;RSQ=0.8733;ERATE=0.0005;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2377066 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.983;LDAF=0.1255;AVGPOST=0.9942;RSQ=0.9754;ERATE=0.0009;THETA=0.0004;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 2377082 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6070;ERATE=0.0006;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2377212 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.720;LDAF=0.0078;AVGPOST=0.9940;RSQ=0.6839;ERATE=0.0011;THETA=0.0021;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2377229 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0030;AVGPOST=0.9949;RSQ=0.4173;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2377309 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2377310 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0055;AVGPOST=0.9990;RSQ=0.9281;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2377326 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.848;LDAF=0.0062;AVGPOST=0.9984;RSQ=0.9099;ERATE=0.0004;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2377400 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.1257;AVGPOST=0.9972;RSQ=0.9884;ERATE=0.0006;THETA=0.0006;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 2377433 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0053;AVGPOST=0.9993;RSQ=0.9343;ERATE=0.0004;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2377480 rs59377883 AG A 4073 PASS INDEL;BAVGPOST=0.975;BRSQ=0.863;LDAF=0.0812;AVGPOST=0.9862;RSQ=0.9338;ERATE=0.0011;THETA=0.0009;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 2377482 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.832;LDAF=0.0058;AVGPOST=0.9962;RSQ=0.7359;ERATE=0.0006;THETA=0.0015;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2377502 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0057;AVGPOST=0.9986;RSQ=0.8944;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2377525 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.974;LDAF=0.1255;AVGPOST=0.9966;RSQ=0.9859;ERATE=0.0006;THETA=0.0002;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 2377654 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.699;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4772;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2377704 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.707;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4908;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2377790 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.839;LDAF=0.0085;AVGPOST=0.9952;RSQ=0.7779;ERATE=0.0008;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2377803 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0070;AVGPOST=0.9988;RSQ=0.9339;ERATE=0.0004;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2377944 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.786;LDAF=0.0148;AVGPOST=0.9920;RSQ=0.7947;ERATE=0.0009;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 2378046 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.962;LDAF=0.1279;AVGPOST=0.9893;RSQ=0.9626;ERATE=0.0009;THETA=0.0003;AC=281;AN=2184 GT:DS:GL:BD 0.12866300 0
1 2378238 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.775;LDAF=0.0557;AVGPOST=0.9877;RSQ=0.9118;ERATE=0.0015;THETA=0.0003;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 2378239 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.563;LDAF=0.0030;AVGPOST=0.9959;RSQ=0.4405;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2378377 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.774;LDAF=0.0030;AVGPOST=0.9983;RSQ=0.7903;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2378527 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.694;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5779;ERATE=0.0004;THETA=0.0036;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2378612 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0075;AVGPOST=0.9994;RSQ=0.9703;ERATE=0.0004;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2378692 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8087;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2378802 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.895;LDAF=0.0084;AVGPOST=0.9978;RSQ=0.9041;ERATE=0.0004;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2378934 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0007;AVGPOST=0.9989;RSQ=0.3215;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2379062 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0118;AVGPOST=0.9991;RSQ=0.9647;ERATE=0.0003;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 2379065 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.858;LDAF=0.0120;AVGPOST=0.9956;RSQ=0.8584;ERATE=0.0004;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 2379143 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0031;AVGPOST=0.9975;RSQ=0.7177;ERATE=0.0004;THETA=0.0027;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2379151 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2379248 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.986;LDAF=0.3130;AVGPOST=0.9881;RSQ=0.9794;ERATE=0.0015;THETA=0.0004;AC=683;AN=2184 GT:DS:GL:BD 0.31272894 0
1 2379463 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7078;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2379501 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.991;LDAF=0.3142;AVGPOST=0.9924;RSQ=0.9882;ERATE=0.0008;THETA=0.0005;AC=683;AN=2184 GT:DS:GL:BD 0.31272894 0
1 2379550 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.994;LDAF=0.3071;AVGPOST=0.9932;RSQ=0.9885;ERATE=0.0008;THETA=0.0003;AC=669;AN=2184 GT:DS:GL:BD 0.30631867 0
1 2379556 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5611;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2379670 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0176;AVGPOST=0.9986;RSQ=0.9635;ERATE=0.0005;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 2379705 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.988;LDAF=0.7018;AVGPOST=0.9926;RSQ=0.9874;ERATE=0.0010;THETA=0.0019;AC=1535;AN=2184 GT:DS:GL:BD 0.70283884 1
1 2379726 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.5957;ERATE=0.0005;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2379870 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.785;LDAF=0.0020;AVGPOST=0.9984;RSQ=0.6463;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2380078 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0083;AVGPOST=0.9989;RSQ=0.9511;ERATE=0.0004;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2380147 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.978;LDAF=0.1210;AVGPOST=0.9963;RSQ=0.9848;ERATE=0.0005;THETA=0.0002;AC=265;AN=2184 GT:DS:GL:BD 0.12133700 0
1 2380273 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.970;LDAF=0.0871;AVGPOST=0.9944;RSQ=0.9735;ERATE=0.0006;THETA=0.0026;AC=188;AN=2184 GT:DS:GL:BD 0.08608059 0
1 2380279 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.987;LDAF=0.0572;AVGPOST=0.9955;RSQ=0.9743;ERATE=0.0007;THETA=0.0004;AC=123;AN=2184 GT:DS:GL:BD 0.05631868 0
1 2380292 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.918;LDAF=0.1198;AVGPOST=0.9952;RSQ=0.9805;ERATE=0.0006;THETA=0.0006;AC=262;AN=2184 GT:DS:GL:BD 0.11996337 0
1 2380384 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.968;LDAF=0.0934;AVGPOST=0.9908;RSQ=0.9624;ERATE=0.0004;THETA=0.0003;AC=202;AN=2184 GT:DS:GL:BD 0.09249084 0
1 2380402 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.971;LDAF=0.0412;AVGPOST=0.9952;RSQ=0.9584;ERATE=0.0009;THETA=0.0006;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 2380404 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.743;LDAF=0.0021;AVGPOST=0.9983;RSQ=0.6158;ERATE=0.0007;THETA=0.0021;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2380519 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.980;LDAF=0.0385;AVGPOST=0.9957;RSQ=0.9618;ERATE=0.0006;THETA=0.0019;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 2380569 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.938;LDAF=0.0097;AVGPOST=0.9957;RSQ=0.8336;ERATE=0.0005;THETA=0.0009;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2380620 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.626;LDAF=0.0034;AVGPOST=0.9963;RSQ=0.5694;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2380700 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.874;LDAF=0.0339;AVGPOST=0.9771;RSQ=0.7329;ERATE=0.0015;THETA=0.0010;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 2380702 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.514;LDAF=0.0044;AVGPOST=0.9957;RSQ=0.5970;ERATE=0.0007;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2380742 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.422;LDAF=0.0124;AVGPOST=0.9808;RSQ=0.3737;ERATE=0.0041;THETA=0.0027;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2380847 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.913;LDAF=0.0654;AVGPOST=0.9870;RSQ=0.9157;ERATE=0.0003;THETA=0.0006;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 2381070 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2381164 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0178;AVGPOST=0.9995;RSQ=0.9868;ERATE=0.0003;THETA=0.0009;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 2381278 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0041;AVGPOST=0.9970;RSQ=0.7091;ERATE=0.0004;THETA=0.0050;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2381460 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.836;LDAF=0.0081;AVGPOST=0.9986;RSQ=0.9315;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2381531 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.946;LDAF=0.0205;AVGPOST=0.9982;RSQ=0.9633;ERATE=0.0004;THETA=0.0003;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 2381539 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.983;LDAF=0.3149;AVGPOST=0.9804;RSQ=0.9660;ERATE=0.0011;THETA=0.0004;AC=687;AN=2184 GT:DS:GL:BD 0.31456044 0
1 2381568 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.989;LDAF=0.6986;AVGPOST=0.9884;RSQ=0.9819;ERATE=0.0006;THETA=0.0011;AC=1529;AN=2184 GT:DS:GL:BD 0.70009160 1
1 2381622 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.985;LDAF=0.4706;AVGPOST=0.9824;RSQ=0.9730;ERATE=0.0012;THETA=0.0010;AC=1030;AN=2184 GT:DS:GL:BD 0.47161171 0
1 2381624 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.622;LDAF=0.0054;AVGPOST=0.9968;RSQ=0.7906;ERATE=0.0004;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2381918 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.630;LDAF=0.0026;AVGPOST=0.9956;RSQ=0.2679;ERATE=0.0007;THETA=0.0065;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2381981 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.943;BRSQ=0.862;LDAF=0.2796;AVGPOST=0.8691;RSQ=0.7600;ERATE=0.0068;THETA=0.0005;AC=574;AN=2184 GT:DS:GL:BD 0.26282051 0
1 2382025 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.925;BRSQ=0.398;LDAF=0.0747;AVGPOST=0.9313;RSQ=0.6184;ERATE=0.0044;THETA=0.0006;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 2382122 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.511;BRSQ=0.025;LDAF=0.2258;AVGPOST=0.7112;RSQ=0.3205;ERATE=0.0125;THETA=0.0035;AC=250;AN=2184 GT:DS:GL:BD 0.11446887 0
1 2382152 . G GC 124 PASS INDEL;BAVGPOST=0.715;BRSQ=0.054;LDAF=0.2024;AVGPOST=0.7536;RSQ=0.3987;ERATE=0.0127;THETA=0.0014;AC=261;AN=2184 GT:DS:GL:BD 0.11950549 0
1 2382241 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0073;AVGPOST=0.9984;RSQ=0.9142;ERATE=0.0004;THETA=0.0010;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2382272 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.936;LDAF=0.0232;AVGPOST=0.9964;RSQ=0.9415;ERATE=0.0003;THETA=0.0020;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 2382284 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.727;LDAF=0.0029;AVGPOST=0.9954;RSQ=0.3809;ERATE=0.0005;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2382330 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.873;LDAF=0.0046;AVGPOST=0.9988;RSQ=0.8908;ERATE=0.0003;THETA=0.0027;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2382333 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2382334 . GT G 580 PASS INDEL;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0046;AVGPOST=0.9987;RSQ=0.8826;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2382641 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.685;LDAF=0.0042;AVGPOST=0.9962;RSQ=0.6136;ERATE=0.0007;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2382710 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0026;AVGPOST=0.9982;RSQ=0.6875;ERATE=0.0008;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2382749 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.731;LDAF=0.0034;AVGPOST=0.9971;RSQ=0.6891;ERATE=0.0004;THETA=0.0055;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2382968 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0076;AVGPOST=0.9976;RSQ=0.8948;ERATE=0.0005;THETA=0.0045;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 2383039 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.983;LDAF=0.6903;AVGPOST=0.9828;RSQ=0.9720;ERATE=0.0012;THETA=0.0014;AC=1516;AN=2184 GT:DS:GL:BD 0.69413918 1
1 2383045 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.581;LDAF=0.0053;AVGPOST=0.9933;RSQ=0.4736;ERATE=0.0007;THETA=0.0025;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2383070 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.839;LDAF=0.0113;AVGPOST=0.9937;RSQ=0.7731;ERATE=0.0008;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2383073 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0168;AVGPOST=0.9910;RSQ=0.7733;ERATE=0.0014;THETA=0.0008;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2383092 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.976;LDAF=0.2125;AVGPOST=0.9841;RSQ=0.9605;ERATE=0.0012;THETA=0.0012;AC=468;AN=2184 GT:DS:GL:BD 0.21428572 0
1 2383331 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0083;AVGPOST=0.9968;RSQ=0.8225;ERATE=0.0005;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 2383348 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0117;AVGPOST=0.9986;RSQ=0.9430;ERATE=0.0005;THETA=0.0026;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 2383374 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.987;LDAF=0.1585;AVGPOST=0.9904;RSQ=0.9731;ERATE=0.0012;THETA=0.0004;AC=342;AN=2184 GT:DS:GL:BD 0.15659341 0
1 2383438 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.968;LDAF=0.0090;AVGPOST=0.9973;RSQ=0.8957;ERATE=0.0004;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2383473 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.464;LDAF=0.0094;AVGPOST=0.9872;RSQ=0.4802;ERATE=0.0006;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2383484 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0116;AVGPOST=0.9947;RSQ=0.8362;ERATE=0.0007;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 2383488 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.692;LDAF=0.0151;AVGPOST=0.9883;RSQ=0.7273;ERATE=0.0006;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 2383589 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.946;LDAF=0.0137;AVGPOST=0.9912;RSQ=0.7386;ERATE=0.0011;THETA=0.0007;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 2383687 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.406;LDAF=0.0029;AVGPOST=0.9960;RSQ=0.4413;ERATE=0.0005;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2383745 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.579;LDAF=0.0031;AVGPOST=0.9967;RSQ=0.5435;ERATE=0.0007;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2383756 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.981;LDAF=0.5112;AVGPOST=0.9888;RSQ=0.9826;ERATE=0.0006;THETA=0.0008;AC=1119;AN=2184 GT:DS:GL:BD 0.51236266 1
1 2383946 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0120;AVGPOST=0.9973;RSQ=0.9006;ERATE=0.0005;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 2383979 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.677;LDAF=0.0050;AVGPOST=0.9939;RSQ=0.5218;ERATE=0.0009;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2383993 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0119;AVGPOST=0.9980;RSQ=0.9262;ERATE=0.0004;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 2384017 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2066;AVGPOST=0.9968;RSQ=0.9919;ERATE=0.0003;THETA=0.0003;AC=453;AN=2184 GT:DS:GL:BD 0.20741758 0
1 2384048 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0160;AVGPOST=0.9989;RSQ=0.9707;ERATE=0.0004;THETA=0.0002;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 2384108 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.6871;AVGPOST=0.9926;RSQ=0.9878;ERATE=0.0008;THETA=0.0005;AC=1504;AN=2184 GT:DS:GL:BD 0.68864471 1
1 2384146 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.580;LDAF=0.0028;AVGPOST=0.9967;RSQ=0.4898;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2384150 . TGG T 22 PASS INDEL;BAVGPOST=0.999;BRSQ=0.596;LDAF=0.0036;AVGPOST=0.9956;RSQ=0.5524;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2384173 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.1950;AVGPOST=0.9934;RSQ=0.9824;ERATE=0.0006;THETA=0.0010;AC=428;AN=2184 GT:DS:GL:BD 0.19597070 0
1 2384262 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.924;LDAF=0.0122;AVGPOST=0.9957;RSQ=0.8809;ERATE=0.0004;THETA=0.0007;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 2384356 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.777;LDAF=0.0061;AVGPOST=0.9956;RSQ=0.7137;ERATE=0.0005;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2384461 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0014;AVGPOST=0.9979;RSQ=0.3163;ERATE=0.0007;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2384495 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.971;LDAF=0.0407;AVGPOST=0.9932;RSQ=0.9402;ERATE=0.0009;THETA=0.0008;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 2384532 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.973;LDAF=0.1953;AVGPOST=0.9932;RSQ=0.9837;ERATE=0.0007;THETA=0.0009;AC=429;AN=2184 GT:DS:GL:BD 0.19642857 0
1 2384533 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.806;LDAF=0.0232;AVGPOST=0.9879;RSQ=0.7906;ERATE=0.0004;THETA=0.0004;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 2384556 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.751;LDAF=0.0043;AVGPOST=0.9933;RSQ=0.3471;ERATE=0.0014;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2384624 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.988;LDAF=0.1570;AVGPOST=0.9952;RSQ=0.9858;ERATE=0.0005;THETA=0.0010;AC=343;AN=2184 GT:DS:GL:BD 0.15705128 0
1 2384635 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0091;AVGPOST=0.9964;RSQ=0.8364;ERATE=0.0004;THETA=0.0022;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2384695 . CG C 438 PASS INDEL;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0095;AVGPOST=0.9965;RSQ=0.8661;ERATE=0.0004;THETA=0.0008;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2384774 . CCT C 65 PASS INDEL;BAVGPOST=1.000;BRSQ=0.692;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.5954;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2384782 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9319;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2385080 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.727;LDAF=0.0042;AVGPOST=0.9944;RSQ=0.4520;ERATE=0.0020;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2385192 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.665;LDAF=0.0038;AVGPOST=0.9962;RSQ=0.5900;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2385236 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.991;LDAF=0.6980;AVGPOST=0.9858;RSQ=0.9768;ERATE=0.0012;THETA=0.0006;AC=1527;AN=2184 GT:DS:GL:BD 0.69917583 1
1 2385311 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.613;LDAF=0.0040;AVGPOST=0.9940;RSQ=0.4207;ERATE=0.0007;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2385475 . G GA 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.647;LDAF=0.0052;AVGPOST=0.9934;RSQ=0.4287;ERATE=0.0013;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2385513 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.3794;ERATE=0.0006;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2385570 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0024;AVGPOST=0.9962;RSQ=0.4003;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2385614 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.721;LDAF=0.0077;AVGPOST=0.9944;RSQ=0.7318;ERATE=0.0011;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2385777 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0035;AVGPOST=0.9984;RSQ=0.8067;ERATE=0.0006;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2385826 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5443;ERATE=0.0004;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2385862 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0087;AVGPOST=0.9983;RSQ=0.9264;ERATE=0.0004;THETA=0.0020;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 2386090 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.613;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.4120;ERATE=0.0008;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2386098 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.974;LDAF=0.2226;AVGPOST=0.9861;RSQ=0.9675;ERATE=0.0009;THETA=0.0004;AC=483;AN=2184 GT:DS:GL:BD 0.22115384 0
1 2386177 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.873;LDAF=0.0112;AVGPOST=0.9931;RSQ=0.7913;ERATE=0.0007;THETA=0.0008;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 2386237 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0056;AVGPOST=0.9989;RSQ=0.9241;ERATE=0.0004;THETA=0.0024;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2386309 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.383;LDAF=0.0020;AVGPOST=0.9972;RSQ=0.4218;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2386363 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.521;LDAF=0.0026;AVGPOST=0.9960;RSQ=0.3804;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2386397 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.912;LDAF=0.0118;AVGPOST=0.9957;RSQ=0.8699;ERATE=0.0006;THETA=0.0025;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 2386425 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.791;LDAF=0.0492;AVGPOST=0.9872;RSQ=0.8999;ERATE=0.0007;THETA=0.0011;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 2386447 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.909;LDAF=0.0113;AVGPOST=0.9962;RSQ=0.8808;ERATE=0.0004;THETA=0.0014;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 2386546 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.740;LDAF=0.0046;AVGPOST=0.9949;RSQ=0.5875;ERATE=0.0007;THETA=0.0021;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2386611 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.969;LDAF=0.0293;AVGPOST=0.9964;RSQ=0.9561;ERATE=0.0003;THETA=0.0004;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 2386666 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.906;LDAF=0.0090;AVGPOST=0.9970;RSQ=0.8748;ERATE=0.0005;THETA=0.0046;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 2386736 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.920;LDAF=0.1526;AVGPOST=0.9839;RSQ=0.9551;ERATE=0.0007;THETA=0.0027;AC=330;AN=2184 GT:DS:GL:BD 0.15109891 0
1 2386878 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.969;LDAF=0.1726;AVGPOST=0.9876;RSQ=0.9675;ERATE=0.0022;THETA=0.0005;AC=377;AN=2184 GT:DS:GL:BD 0.17261904 0
1 2386907 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.622;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.5022;ERATE=0.0006;THETA=0.0073;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2387101 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.965;LDAF=0.6083;AVGPOST=0.9765;RSQ=0.9666;ERATE=0.0016;THETA=0.0019;AC=1328;AN=2184 GT:DS:GL:BD 0.60805863 1
1 2387134 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.702;LDAF=0.0225;AVGPOST=0.9885;RSQ=0.7930;ERATE=0.0007;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 2387269 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.947;LDAF=0.2679;AVGPOST=0.9772;RSQ=0.9536;ERATE=0.0014;THETA=0.0006;AC=585;AN=2184 GT:DS:GL:BD 0.26785713 0
1 2387309 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.694;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8735;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2387331 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.561;LDAF=0.0019;AVGPOST=0.9982;RSQ=0.6164;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2387354 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0195;AVGPOST=0.9968;RSQ=0.9353;ERATE=0.0014;THETA=0.0032;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 2387444 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8474;ERATE=0.0003;THETA=0.0055;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2387515 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.750;LDAF=0.0019;AVGPOST=0.9985;RSQ=0.6813;ERATE=0.0004;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2387518 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0020;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2387556 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.851;LDAF=0.0043;AVGPOST=0.9984;RSQ=0.8364;ERATE=0.0004;THETA=0.0042;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2387646 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.743;LDAF=0.0022;AVGPOST=0.9977;RSQ=0.5615;ERATE=0.0005;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2387715 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.951;BRSQ=0.824;LDAF=0.1445;AVGPOST=0.9625;RSQ=0.8954;ERATE=0.0006;THETA=0.0028;AC=307;AN=2184 GT:DS:GL:BD 0.14056776 0
1 2387761 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.476;LDAF=0.0069;AVGPOST=0.9890;RSQ=0.4243;ERATE=0.0007;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2387828 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.984;LDAF=0.1840;AVGPOST=0.9889;RSQ=0.9700;ERATE=0.0009;THETA=0.0020;AC=400;AN=2184 GT:DS:GL:BD 0.18315019 0
1 2387880 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.776;LDAF=0.0029;AVGPOST=0.9978;RSQ=0.6651;ERATE=0.0007;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2387913 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.2003;AVGPOST=0.9944;RSQ=0.9859;ERATE=0.0005;THETA=0.0003;AC=438;AN=2184 GT:DS:GL:BD 0.20054945 0
1 2388109 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0193;AVGPOST=0.9954;RSQ=0.9100;ERATE=0.0005;THETA=0.0046;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 2388141 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.802;LDAF=0.0037;AVGPOST=0.9980;RSQ=0.7708;ERATE=0.0004;THETA=0.0042;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2388143 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.800;LDAF=0.0047;AVGPOST=0.9978;RSQ=0.7831;ERATE=0.0006;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2388282 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.627;LDAF=0.0028;AVGPOST=0.9974;RSQ=0.6083;ERATE=0.0005;THETA=0.0056;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2388292 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1494;AVGPOST=0.9961;RSQ=0.9878;ERATE=0.0006;THETA=0.0007;AC=326;AN=2184 GT:DS:GL:BD 0.14926741 0
1 2388314 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0154;AVGPOST=0.9995;RSQ=0.9844;ERATE=0.0004;THETA=0.0010;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 2388385 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1482;AVGPOST=0.9972;RSQ=0.9913;ERATE=0.0004;THETA=0.0007;AC=323;AN=2184 GT:DS:GL:BD 0.14789377 0
1 2388485 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.562;LDAF=0.0052;AVGPOST=0.9958;RSQ=0.6689;ERATE=0.0004;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2388492 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.361;LDAF=0.0024;AVGPOST=0.9967;RSQ=0.4473;ERATE=0.0006;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2388506 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.751;LDAF=0.0027;AVGPOST=0.9968;RSQ=0.4968;ERATE=0.0005;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2388538 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.706;LDAF=0.0104;AVGPOST=0.9911;RSQ=0.6930;ERATE=0.0008;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2388648 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4040;ERATE=0.0005;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2388678 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.537;LDAF=0.0038;AVGPOST=0.9951;RSQ=0.4621;ERATE=0.0009;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2388697 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.694;LDAF=0.0066;AVGPOST=0.9956;RSQ=0.7223;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2388823 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.987;LDAF=0.2207;AVGPOST=0.9909;RSQ=0.9797;ERATE=0.0013;THETA=0.0004;AC=479;AN=2184 GT:DS:GL:BD 0.21932234 0
1 2388828 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.675;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4440;ERATE=0.0007;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2388995 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.512;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6141;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2389049 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.919;LDAF=0.0090;AVGPOST=0.9972;RSQ=0.8876;ERATE=0.0006;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2389152 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.986;LDAF=0.3389;AVGPOST=0.9929;RSQ=0.9877;ERATE=0.0004;THETA=0.0005;AC=741;AN=2184 GT:DS:GL:BD 0.33928570 0
1 2389162 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.846;LDAF=0.0042;AVGPOST=0.9979;RSQ=0.8184;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2389234 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0152;AVGPOST=0.9987;RSQ=0.9622;ERATE=0.0005;THETA=0.0002;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 2389352 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.576;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6151;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2389376 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.971;LDAF=0.0395;AVGPOST=0.9974;RSQ=0.9756;ERATE=0.0004;THETA=0.0005;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 2389435 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.992;LDAF=0.4383;AVGPOST=0.9913;RSQ=0.9868;ERATE=0.0005;THETA=0.0003;AC=957;AN=2184 GT:DS:GL:BD 0.43818682 0
1 2389571 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.511;LDAF=0.0033;AVGPOST=0.9970;RSQ=0.6315;ERATE=0.0005;THETA=0.0020;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2389586 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0229;AVGPOST=0.9987;RSQ=0.9741;ERATE=0.0005;THETA=0.0009;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 2389624 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.688;LDAF=0.0024;AVGPOST=0.9974;RSQ=0.5412;ERATE=0.0008;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2389681 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.929;LDAF=0.0068;AVGPOST=0.9980;RSQ=0.8776;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2389702 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1896;AVGPOST=0.9971;RSQ=0.9928;ERATE=0.0006;THETA=0.0045;AC=413;AN=2184 GT:DS:GL:BD 0.18910256 0
1 2389711 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.971;LDAF=0.0324;AVGPOST=0.9966;RSQ=0.9604;ERATE=0.0007;THETA=0.0007;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 2389845 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1869;AVGPOST=0.9972;RSQ=0.9927;ERATE=0.0006;THETA=0.0002;AC=407;AN=2184 GT:DS:GL:BD 0.18635531 0
1 2389879 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.862;LDAF=0.0056;AVGPOST=0.9983;RSQ=0.8668;ERATE=0.0004;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2389917 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.685;LDAF=0.0017;AVGPOST=0.9982;RSQ=0.5431;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2389925 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1495;AVGPOST=0.9980;RSQ=0.9932;ERATE=0.0004;THETA=0.0007;AC=326;AN=2184 GT:DS:GL:BD 0.14926741 0
1 2389975 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0023;AVGPOST=0.9981;RSQ=0.6203;ERATE=0.0007;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2390091 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8524;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2390121 rs35697743 TG T 10825 PASS INDEL;BAVGPOST=0.992;BRSQ=0.974;LDAF=0.1900;AVGPOST=0.9892;RSQ=0.9715;ERATE=0.0012;THETA=0.0025;AC=409;AN=2184 GT:DS:GL:BD 0.18727106 0
1 2390133 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0306;AVGPOST=0.9983;RSQ=0.9752;ERATE=0.0005;THETA=0.0003;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 2390149 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.981;LDAF=0.0340;AVGPOST=0.9972;RSQ=0.9709;ERATE=0.0005;THETA=0.0004;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 2390189 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0164;AVGPOST=0.9962;RSQ=0.9087;ERATE=0.0004;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 2390204 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.878;LDAF=0.0073;AVGPOST=0.9971;RSQ=0.8576;ERATE=0.0004;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2390216 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5543;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2390258 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5882;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2390331 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.975;LDAF=0.3381;AVGPOST=0.9858;RSQ=0.9767;ERATE=0.0034;THETA=0.0052;AC=737;AN=2184 GT:DS:GL:BD 0.33745420 0
1 2390332 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.607;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4171;ERATE=0.0006;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2390333 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.971;LDAF=0.0308;AVGPOST=0.9973;RSQ=0.9658;ERATE=0.0005;THETA=0.0006;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 2390353 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0389;AVGPOST=0.9986;RSQ=0.9859;ERATE=0.0004;THETA=0.0005;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 2390413 . GTC G 2788 PASS INDEL;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0420;AVGPOST=0.9971;RSQ=0.9705;ERATE=0.0005;THETA=0.0048;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 2390423 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7629;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2390466 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.915;LDAF=0.0073;AVGPOST=0.9990;RSQ=0.9369;ERATE=0.0006;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 2390469 . GC G 1013 PASS INDEL;BAVGPOST=0.989;BRSQ=0.752;LDAF=0.0229;AVGPOST=0.9886;RSQ=0.7951;ERATE=0.0004;THETA=0.0006;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 2390507 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4520;ERATE=0.0004;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2390580 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4912;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2390588 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.987;LDAF=0.6648;AVGPOST=0.9903;RSQ=0.9845;ERATE=0.0019;THETA=0.0008;AC=1456;AN=2184 GT:DS:GL:BD 0.66666669 1
1 2390608 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.970;LDAF=0.0181;AVGPOST=0.9985;RSQ=0.9656;ERATE=0.0005;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 2390615 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.978;LDAF=0.0253;AVGPOST=0.9986;RSQ=0.9812;ERATE=0.0003;THETA=0.0007;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 2390650 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.969;LDAF=0.0978;AVGPOST=0.9952;RSQ=0.9802;ERATE=0.0004;THETA=0.0003;AC=211;AN=2184 GT:DS:GL:BD 0.09661172 0
1 2390715 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.983;LDAF=0.6673;AVGPOST=0.9900;RSQ=0.9851;ERATE=0.0009;THETA=0.0021;AC=1458;AN=2184 GT:DS:GL:BD 0.66758239 1
1 2390840 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.849;BRSQ=0.710;LDAF=0.5690;AVGPOST=0.7999;RSQ=0.6671;ERATE=0.0466;THETA=0.0006;AC=1288;AN=2184 GT:DS:GL:BD 0.58974361 1
1 2390865 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.753;BRSQ=0.278;LDAF=0.2742;AVGPOST=0.7291;RSQ=0.3794;ERATE=0.0564;THETA=0.0008;AC=392;AN=2184 GT:DS:GL:BD 0.17948718 0
1 2390881 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.766;BRSQ=0.288;LDAF=0.2650;AVGPOST=0.7119;RSQ=0.3459;ERATE=0.0478;THETA=0.0009;AC=358;AN=2184 GT:DS:GL:BD 0.16391942 0
1 2390894 . T TG 54 PASS INDEL;BAVGPOST=0.974;BRSQ=0.176;LDAF=0.0625;AVGPOST=0.9036;RSQ=0.3514;ERATE=0.0053;THETA=0.0015;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 2390911 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.849;BRSQ=0.282;LDAF=0.1701;AVGPOST=0.7912;RSQ=0.3937;ERATE=0.0189;THETA=0.0004;AC=201;AN=2184 GT:DS:GL:BD 0.09203297 0
1 2390927 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.667;BRSQ=0.299;LDAF=0.3584;AVGPOST=0.6933;RSQ=0.3532;ERATE=0.0650;THETA=0.0006;AC=567;AN=2184 GT:DS:GL:BD 0.25961539 0
1 2390990 . T TG 144 PASS INDEL;BAVGPOST=0.997;BRSQ=0.547;LDAF=0.0066;AVGPOST=0.9899;RSQ=0.3451;ERATE=0.0020;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2390993 . TG T 84 PASS INDEL;BAVGPOST=0.997;BRSQ=0.546;LDAF=0.0025;AVGPOST=0.9963;RSQ=0.3796;ERATE=0.0007;THETA=0.0028;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2391009 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.961;BRSQ=0.559;LDAF=0.0533;AVGPOST=0.9419;RSQ=0.5502;ERATE=0.0138;THETA=0.0009;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 2391025 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.575;LDAF=0.0205;AVGPOST=0.9814;RSQ=0.6365;ERATE=0.0018;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2391033 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.895;BRSQ=0.708;LDAF=0.2091;AVGPOST=0.8918;RSQ=0.7580;ERATE=0.0209;THETA=0.0007;AC=434;AN=2184 GT:DS:GL:BD 0.19871795 0
1 2391055 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.577;LDAF=0.0462;AVGPOST=0.9490;RSQ=0.5438;ERATE=0.0079;THETA=0.0009;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 2391058 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.856;BRSQ=0.478;LDAF=0.1856;AVGPOST=0.8382;RSQ=0.5693;ERATE=0.0284;THETA=0.0020;AC=292;AN=2184 GT:DS:GL:BD 0.13369964 0
1 2391065 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.861;BRSQ=0.410;LDAF=0.1574;AVGPOST=0.8618;RSQ=0.5860;ERATE=0.0176;THETA=0.0009;AC=253;AN=2184 GT:DS:GL:BD 0.11584249 0
1 2391074 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.781;BRSQ=0.662;LDAF=0.3952;AVGPOST=0.7873;RSQ=0.6586;ERATE=0.0532;THETA=0.0007;AC=854;AN=2184 GT:DS:GL:BD 0.39102563 0
1 2391081 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.924;BRSQ=0.820;LDAF=0.2949;AVGPOST=0.8399;RSQ=0.6664;ERATE=0.0448;THETA=0.0006;AC=582;AN=2184 GT:DS:GL:BD 0.26648352 0
1 2391103 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.928;BRSQ=0.676;LDAF=0.1660;AVGPOST=0.8665;RSQ=0.5772;ERATE=0.0289;THETA=0.0008;AC=256;AN=2184 GT:DS:GL:BD 0.11721612 0
1 2391106 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.933;BRSQ=0.669;LDAF=0.1367;AVGPOST=0.8875;RSQ=0.5945;ERATE=0.0164;THETA=0.0004;AC=216;AN=2184 GT:DS:GL:BD 0.09890110 0
1 2391139 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4559;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2391231 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.834;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8982;ERATE=0.0003;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2391252 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.988;LDAF=0.6607;AVGPOST=0.9946;RSQ=0.9919;ERATE=0.0007;THETA=0.0006;AC=1444;AN=2184 GT:DS:GL:BD 0.66117215 1
1 2391301 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.722;LDAF=0.0020;AVGPOST=0.9978;RSQ=0.5330;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2391367 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.964;LDAF=0.2606;AVGPOST=0.9804;RSQ=0.9606;ERATE=0.0024;THETA=0.0012;AC=569;AN=2184 GT:DS:GL:BD 0.26053113 0
1 2391382 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.661;LDAF=0.0175;AVGPOST=0.9893;RSQ=0.7403;ERATE=0.0007;THETA=0.0032;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2391465 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0101;AVGPOST=0.9945;RSQ=0.7929;ERATE=0.0007;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2391478 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0081;AVGPOST=0.9992;RSQ=0.9523;ERATE=0.0005;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2391491 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2582;AVGPOST=0.9945;RSQ=0.9887;ERATE=0.0005;THETA=0.0002;AC=561;AN=2184 GT:DS:GL:BD 0.25686812 0
1 2391537 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.947;LDAF=0.0085;AVGPOST=0.9991;RSQ=0.9590;ERATE=0.0004;THETA=0.0019;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2391561 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1850;AVGPOST=0.9917;RSQ=0.9800;ERATE=0.0006;THETA=0.0003;AC=402;AN=2184 GT:DS:GL:BD 0.18406594 0
1 2391582 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.704;LDAF=0.0119;AVGPOST=0.9922;RSQ=0.7366;ERATE=0.0011;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2391853 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6037;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2391891 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.897;LDAF=0.0908;AVGPOST=0.9920;RSQ=0.9681;ERATE=0.0005;THETA=0.0002;AC=199;AN=2184 GT:DS:GL:BD 0.09111722 0
1 2391905 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.733;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5605;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2392141 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.700;LDAF=0.0079;AVGPOST=0.9941;RSQ=0.7052;ERATE=0.0005;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2392146 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0025;AVGPOST=0.9982;RSQ=0.6718;ERATE=0.0006;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2392330 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.672;LDAF=0.0021;AVGPOST=0.9987;RSQ=0.7511;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2392339 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1857;AVGPOST=0.9961;RSQ=0.9893;ERATE=0.0005;THETA=0.0006;AC=404;AN=2184 GT:DS:GL:BD 0.18498169 0
1 2392458 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.630;LDAF=0.0034;AVGPOST=0.9977;RSQ=0.7113;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2392648 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.7173;AVGPOST=0.9967;RSQ=0.9940;ERATE=0.0005;THETA=0.0004;AC=1567;AN=2184 GT:DS:GL:BD 0.71749085 1
1 2392700 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.780;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.6022;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2392707 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.690;LDAF=0.0122;AVGPOST=0.9906;RSQ=0.6814;ERATE=0.0007;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 2392710 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.668;LDAF=0.0096;AVGPOST=0.9969;RSQ=0.8485;ERATE=0.0005;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 2392719 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.646;LDAF=0.0025;AVGPOST=0.9984;RSQ=0.7340;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2392771 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0170;AVGPOST=0.9964;RSQ=0.9218;ERATE=0.0005;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 2392879 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0017;AVGPOST=0.9988;RSQ=0.6846;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2392911 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.521;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5128;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2392944 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.7728;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2393080 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.6694;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2393306 . T TC 14436 PASS INDEL;BAVGPOST=0.990;BRSQ=0.988;LDAF=0.6551;AVGPOST=0.9891;RSQ=0.9822;ERATE=0.0011;THETA=0.0006;AC=1435;AN=2184 GT:DS:GL:BD 0.65705127 1
1 2393457 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0193;AVGPOST=0.9962;RSQ=0.9208;ERATE=0.0008;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 2393517 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.322;LDAF=0.0015;AVGPOST=0.9978;RSQ=0.3309;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2393523 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1844;AVGPOST=0.9941;RSQ=0.9842;ERATE=0.0009;THETA=0.0007;AC=401;AN=2184 GT:DS:GL:BD 0.18360806 0
1 2393534 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.580;LDAF=0.0045;AVGPOST=0.9964;RSQ=0.6530;ERATE=0.0009;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2393562 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.955;BRSQ=0.690;LDAF=0.0816;AVGPOST=0.9603;RSQ=0.8300;ERATE=0.0012;THETA=0.0004;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 2393569 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.936;BRSQ=0.595;LDAF=0.0963;AVGPOST=0.9081;RSQ=0.6073;ERATE=0.0086;THETA=0.0003;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 2393586 . A AC 34 PASS INDEL;BAVGPOST=0.981;BRSQ=0.303;LDAF=0.0293;AVGPOST=0.9624;RSQ=0.5165;ERATE=0.0019;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 2393620 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.446;LDAF=0.0057;AVGPOST=0.9928;RSQ=0.4802;ERATE=0.0010;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2393658 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.496;LDAF=0.0138;AVGPOST=0.9796;RSQ=0.3761;ERATE=0.0038;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2393678 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.562;LDAF=0.0027;AVGPOST=0.9973;RSQ=0.5703;ERATE=0.0007;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2393682 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0114;AVGPOST=0.9954;RSQ=0.8327;ERATE=0.0008;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2393810 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.1731;AVGPOST=0.9862;RSQ=0.9614;ERATE=0.0017;THETA=0.0004;AC=368;AN=2184 GT:DS:GL:BD 0.16849817 0
1 2393833 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.982;LDAF=0.1474;AVGPOST=0.9923;RSQ=0.9745;ERATE=0.0010;THETA=0.0006;AC=320;AN=2184 GT:DS:GL:BD 0.14652015 0
1 2393886 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0160;AVGPOST=0.9991;RSQ=0.9789;ERATE=0.0004;THETA=0.0002;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 2393887 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.714;LDAF=0.0035;AVGPOST=0.9979;RSQ=0.7457;ERATE=0.0005;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2393915 rs77131659 AC A 2967 PASS INDEL;BAVGPOST=0.990;BRSQ=0.946;LDAF=0.0944;AVGPOST=0.9943;RSQ=0.9759;ERATE=0.0005;THETA=0.0005;AC=204;AN=2184 GT:DS:GL:BD 0.09340660 0
1 2393926 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0157;AVGPOST=0.9988;RSQ=0.9726;ERATE=0.0003;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 2394074 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.6570;AVGPOST=0.9954;RSQ=0.9931;ERATE=0.0006;THETA=0.0007;AC=1435;AN=2184 GT:DS:GL:BD 0.65705127 1
1 2394216 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.783;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.5627;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2394226 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.2691;AVGPOST=0.9957;RSQ=0.9908;ERATE=0.0006;THETA=0.0011;AC=587;AN=2184 GT:DS:GL:BD 0.26877290 0
1 2394318 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.934;LDAF=0.0115;AVGPOST=0.9986;RSQ=0.9419;ERATE=0.0004;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 2394349 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.926;LDAF=0.0047;AVGPOST=0.9989;RSQ=0.9302;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2394471 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.604;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.7966;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2394503 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0088;AVGPOST=0.9995;RSQ=0.9730;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 2394633 . GT G 1355 PASS INDEL;BAVGPOST=0.997;BRSQ=0.911;LDAF=0.0175;AVGPOST=0.9973;RSQ=0.9297;ERATE=0.0007;THETA=0.0006;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 2394648 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.969;LDAF=0.1681;AVGPOST=0.9949;RSQ=0.9861;ERATE=0.0006;THETA=0.0043;AC=368;AN=2184 GT:DS:GL:BD 0.16849817 0
1 2394760 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.715;LDAF=0.0058;AVGPOST=0.9964;RSQ=0.7518;ERATE=0.0005;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2394824 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1862;AVGPOST=0.9970;RSQ=0.9923;ERATE=0.0004;THETA=0.0004;AC=406;AN=2184 GT:DS:GL:BD 0.18589744 0
1 2394988 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8096;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2395068 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.5071;AVGPOST=0.9817;RSQ=0.9717;ERATE=0.0029;THETA=0.0041;AC=1113;AN=2184 GT:DS:GL:BD 0.50961536 1
1 2395070 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.860;LDAF=0.0026;AVGPOST=0.9967;RSQ=0.4533;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2395214 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6252;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2395257 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.752;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4282;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2395391 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0058;AVGPOST=0.9976;RSQ=0.8458;ERATE=0.0004;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2395452 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2146;AVGPOST=0.9988;RSQ=0.9972;ERATE=0.0003;THETA=0.0004;AC=469;AN=2184 GT:DS:GL:BD 0.21474358 0
1 2395538 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7172;AVGPOST=0.9969;RSQ=0.9943;ERATE=0.0005;THETA=0.0004;AC=1568;AN=2184 GT:DS:GL:BD 0.71794873 1
1 2395555 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0093;AVGPOST=0.9993;RSQ=0.9634;ERATE=0.0004;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2395563 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2924;AVGPOST=0.9957;RSQ=0.9916;ERATE=0.0007;THETA=0.0004;AC=639;AN=2184 GT:DS:GL:BD 0.29258242 0
1 2395607 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.885;LDAF=0.0075;AVGPOST=0.9995;RSQ=0.9650;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2395765 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7003;ERATE=0.0004;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2395798 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6745;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2395813 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.773;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6783;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2395859 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.723;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6712;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2395881 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0147;AVGPOST=0.9980;RSQ=0.9498;ERATE=0.0004;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 2396002 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.962;LDAF=0.0179;AVGPOST=0.9988;RSQ=0.9747;ERATE=0.0003;THETA=0.0002;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 2396220 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5051;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2396275 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2140;AVGPOST=0.9984;RSQ=0.9958;ERATE=0.0006;THETA=0.0005;AC=467;AN=2184 GT:DS:GL:BD 0.21382783 0
1 2396312 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.944;LDAF=0.0181;AVGPOST=0.9969;RSQ=0.9336;ERATE=0.0005;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 2396378 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.607;LDAF=0.0024;AVGPOST=0.9981;RSQ=0.6986;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2396426 . CA C 182 PASS INDEL;BAVGPOST=0.999;BRSQ=0.645;LDAF=0.0071;AVGPOST=0.9899;RSQ=0.4116;ERATE=0.0014;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2396454 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0627;AVGPOST=0.9973;RSQ=0.9844;ERATE=0.0004;THETA=0.0004;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 2396576 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0019;AVGPOST=0.9982;RSQ=0.5930;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2396611 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.742;LDAF=0.0098;AVGPOST=0.9953;RSQ=0.8133;ERATE=0.0006;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2396674 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.831;LDAF=0.0241;AVGPOST=0.9907;RSQ=0.8496;ERATE=0.0005;THETA=0.0005;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 2396755 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5075;AVGPOST=0.9970;RSQ=0.9952;ERATE=0.0007;THETA=0.0003;AC=1108;AN=2184 GT:DS:GL:BD 0.50732601 1
1 2396850 . TC T 41 PASS INDEL;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0011;AVGPOST=0.9984;RSQ=0.4427;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2396858 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.732;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5492;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2397054 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0069;AVGPOST=0.9965;RSQ=0.8077;ERATE=0.0004;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2397136 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.989;LDAF=0.2314;AVGPOST=0.9970;RSQ=0.9930;ERATE=0.0007;THETA=0.0018;AC=506;AN=2184 GT:DS:GL:BD 0.23168498 0
1 2397174 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2948;AVGPOST=0.9939;RSQ=0.9885;ERATE=0.0006;THETA=0.0003;AC=641;AN=2184 GT:DS:GL:BD 0.29349816 0
1 2397229 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0176;AVGPOST=0.9969;RSQ=0.9270;ERATE=0.0004;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 2397283 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.775;LDAF=0.0139;AVGPOST=0.9946;RSQ=0.8466;ERATE=0.0005;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 2397319 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.5182;AVGPOST=0.9957;RSQ=0.9932;ERATE=0.0005;THETA=0.0004;AC=1131;AN=2184 GT:DS:GL:BD 0.51785713 1
1 2397338 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.827;LDAF=0.0074;AVGPOST=0.9976;RSQ=0.8736;ERATE=0.0004;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2397365 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.942;LDAF=0.0811;AVGPOST=0.9944;RSQ=0.9740;ERATE=0.0004;THETA=0.0002;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 2397531 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.942;LDAF=0.0801;AVGPOST=0.9949;RSQ=0.9755;ERATE=0.0004;THETA=0.0005;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 2397712 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6633;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2397749 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2157;AVGPOST=0.9976;RSQ=0.9942;ERATE=0.0004;THETA=0.0004;AC=470;AN=2184 GT:DS:GL:BD 0.21520147 0
1 2397793 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.746;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4831;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2397810 . AG A 53 PASS INDEL;BAVGPOST=0.999;BRSQ=0.620;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.3728;ERATE=0.0011;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2397846 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.640;LDAF=0.0061;AVGPOST=0.9938;RSQ=0.6137;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2397941 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.739;LDAF=0.0091;AVGPOST=0.9973;RSQ=0.8783;ERATE=0.0007;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2397996 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5187;AVGPOST=0.9954;RSQ=0.9925;ERATE=0.0006;THETA=0.0004;AC=1131;AN=2184 GT:DS:GL:BD 0.51785713 1
1 2398016 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.702;LDAF=0.0033;AVGPOST=0.9943;RSQ=0.3491;ERATE=0.0006;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2398049 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.801;LDAF=0.0064;AVGPOST=0.9970;RSQ=0.8761;ERATE=0.0004;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 2398050 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2148;AVGPOST=0.9977;RSQ=0.9942;ERATE=0.0007;THETA=0.0004;AC=468;AN=2184 GT:DS:GL:BD 0.21428572 0
1 2398107 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2556;AVGPOST=0.9977;RSQ=0.9947;ERATE=0.0004;THETA=0.0004;AC=558;AN=2184 GT:DS:GL:BD 0.25549451 0
1 2398202 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.562;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5659;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2398211 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0119;AVGPOST=0.9984;RSQ=0.9425;ERATE=0.0004;THETA=0.0016;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 2398376 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5173;AVGPOST=0.9973;RSQ=0.9956;ERATE=0.0003;THETA=0.0005;AC=1130;AN=2184 GT:DS:GL:BD 0.51739925 1
1 2398412 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0154;AVGPOST=0.9992;RSQ=0.9780;ERATE=0.0003;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 2398442 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.684;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8255;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2398763 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.973;LDAF=0.5184;AVGPOST=0.9802;RSQ=0.9700;ERATE=0.0021;THETA=0.0004;AC=1131;AN=2184 GT:DS:GL:BD 0.51785713 1
1 2398864 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.927;LDAF=0.1538;AVGPOST=0.9748;RSQ=0.9209;ERATE=0.0022;THETA=0.0012;AC=324;AN=2184 GT:DS:GL:BD 0.14835165 0
1 2398881 rs74797132 GCCTTCCTCA G 9565 PASS INDEL;BAVGPOST=0.783;BRSQ=0.649;LDAF=0.4114;AVGPOST=0.8633;RSQ=0.8088;ERATE=0.0019;THETA=0.0003;AC=957;AN=2184 GT:DS:GL:BD 0.43818682 0
1 2398891 . CCTTCCTCA C 4441 PASS INDEL;BAVGPOST=0.716;BRSQ=0.523;LDAF=0.3320;AVGPOST=0.8167;RSQ=0.7158;ERATE=0.0038;THETA=0.0008;AC=728;AN=2184 GT:DS:GL:BD 0.33333334 0
1 2398892 . CTTCCTCACG C 6106 PASS INDEL;BAVGPOST=0.718;BRSQ=0.525;LDAF=0.3381;AVGPOST=0.8193;RSQ=0.7254;ERATE=0.0033;THETA=0.0008;AC=735;AN=2184 GT:DS:GL:BD 0.33653846 0
1 2398991 . C CCGG 431 PASS INDEL;BAVGPOST=0.995;BRSQ=0.865;LDAF=0.0324;AVGPOST=0.9783;RSQ=0.7332;ERATE=0.0016;THETA=0.0005;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 2399119 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.7008;AVGPOST=0.9884;RSQ=0.9807;ERATE=0.0007;THETA=0.0013;AC=1535;AN=2184 GT:DS:GL:BD 0.70283884 1
1 2399131 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.845;LDAF=0.0154;AVGPOST=0.9989;RSQ=0.9723;ERATE=0.0004;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 2399149 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.990;LDAF=0.6754;AVGPOST=0.9850;RSQ=0.9767;ERATE=0.0014;THETA=0.0006;AC=1483;AN=2184 GT:DS:GL:BD 0.67902929 1
1 2399402 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.2138;AVGPOST=0.9939;RSQ=0.9870;ERATE=0.0008;THETA=0.0006;AC=466;AN=2184 GT:DS:GL:BD 0.21336997 0
1 2399425 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0068;AVGPOST=0.9970;RSQ=0.8223;ERATE=0.0004;THETA=0.0017;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2399482 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.660;LDAF=0.0109;AVGPOST=0.9963;RSQ=0.8576;ERATE=0.0005;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 2399494 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.664;LDAF=0.0031;AVGPOST=0.9973;RSQ=0.6366;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2399553 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.500;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.3815;ERATE=0.0006;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2399604 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.983;LDAF=0.5149;AVGPOST=0.9875;RSQ=0.9816;ERATE=0.0008;THETA=0.0005;AC=1125;AN=2184 GT:DS:GL:BD 0.51510990 1
1 2399610 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.626;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4548;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2399614 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.983;LDAF=0.5121;AVGPOST=0.9856;RSQ=0.9791;ERATE=0.0007;THETA=0.0011;AC=1118;AN=2184 GT:DS:GL:BD 0.51190478 1
1 2399839 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0016;AVGPOST=0.9983;RSQ=0.5265;ERATE=0.0005;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2399847 . C CG 45 PASS INDEL;BAVGPOST=0.998;BRSQ=0.788;LDAF=0.0032;AVGPOST=0.9953;RSQ=0.3705;ERATE=0.0007;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2400132 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.549;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4403;ERATE=0.0006;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2400300 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.973;LDAF=0.0335;AVGPOST=0.9987;RSQ=0.9843;ERATE=0.0004;THETA=0.0005;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 2400470 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8602;ERATE=0.0003;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2400506 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6216;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2400532 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.665;LDAF=0.0023;AVGPOST=0.9984;RSQ=0.7036;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2400534 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.978;LDAF=0.2229;AVGPOST=0.9875;RSQ=0.9736;ERATE=0.0009;THETA=0.0011;AC=487;AN=2184 GT:DS:GL:BD 0.22298534 0
1 2400535 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0155;AVGPOST=0.9991;RSQ=0.9766;ERATE=0.0004;THETA=0.0011;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 2400662 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4516;ERATE=0.0004;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2400674 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5410;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2400679 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.675;LDAF=0.0063;AVGPOST=0.9971;RSQ=0.7982;ERATE=0.0004;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2400743 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.890;LDAF=0.0835;AVGPOST=0.9872;RSQ=0.9412;ERATE=0.0005;THETA=0.0013;AC=179;AN=2184 GT:DS:GL:BD 0.08195971 0
1 2400805 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0175;AVGPOST=0.9987;RSQ=0.9674;ERATE=0.0004;THETA=0.0008;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 2400905 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.712;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.5745;ERATE=0.0004;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2400934 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.770;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.5695;ERATE=0.0004;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2401021 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.763;LDAF=0.0099;AVGPOST=0.9945;RSQ=0.7778;ERATE=0.0006;THETA=0.0007;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2401124 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.933;LDAF=0.0114;AVGPOST=0.9968;RSQ=0.8942;ERATE=0.0004;THETA=0.0011;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 2401138 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.781;LDAF=0.0063;AVGPOST=0.9963;RSQ=0.7644;ERATE=0.0005;THETA=0.0060;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2401216 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.3857;ERATE=0.0008;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2401227 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0095;AVGPOST=0.9978;RSQ=0.8938;ERATE=0.0006;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 2401238 . GGGTGGAGTT G 1263 PASS INDEL;BAVGPOST=0.997;BRSQ=0.850;LDAF=0.0078;AVGPOST=0.9986;RSQ=0.9333;ERATE=0.0004;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2401346 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6674;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2401354 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.917;LDAF=0.0046;AVGPOST=0.9989;RSQ=0.9149;ERATE=0.0003;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2401364 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.987;LDAF=0.4117;AVGPOST=0.9814;RSQ=0.9696;ERATE=0.0009;THETA=0.0027;AC=899;AN=2184 GT:DS:GL:BD 0.41163003 0
1 2401372 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.902;LDAF=0.0167;AVGPOST=0.9958;RSQ=0.9071;ERATE=0.0005;THETA=0.0017;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 2401473 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.930;LDAF=0.0098;AVGPOST=0.9993;RSQ=0.9694;ERATE=0.0004;THETA=0.0012;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 2401496 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.0278;AVGPOST=0.9986;RSQ=0.9794;ERATE=0.0004;THETA=0.0037;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 2401502 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.871;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.6754;ERATE=0.0004;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2401566 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.978;LDAF=0.0264;AVGPOST=0.9985;RSQ=0.9764;ERATE=0.0005;THETA=0.0013;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 2401568 . GC G 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5492;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2401579 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0169;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0015;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 2401585 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0004;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2401608 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2401650 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9998;AVGPOST=0.9996;RSQ=0.0830;ERATE=0.0003;THETA=0.0011;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 2401668 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.922;LDAF=0.0204;AVGPOST=0.9923;RSQ=0.8534;ERATE=0.0007;THETA=0.0009;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 2401692 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.734;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4808;ERATE=0.0005;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2401779 . GAC G 24 PASS INDEL;BAVGPOST=0.999;BRSQ=0.468;LDAF=0.0082;AVGPOST=0.9885;RSQ=0.4825;ERATE=0.0010;THETA=0.0016;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2401837 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0172;AVGPOST=0.9992;RSQ=0.9793;ERATE=0.0004;THETA=0.0041;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 2401996 . GC G 296 PASS INDEL;BAVGPOST=0.989;BRSQ=0.449;LDAF=0.0178;AVGPOST=0.9824;RSQ=0.6064;ERATE=0.0010;THETA=0.0041;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2402005 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0170;AVGPOST=0.9957;RSQ=0.8888;ERATE=0.0005;THETA=0.0023;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 2402114 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.410;LDAF=0.0035;AVGPOST=0.9956;RSQ=0.4328;ERATE=0.0007;THETA=0.0026;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2402126 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.965;LDAF=0.0190;AVGPOST=0.9976;RSQ=0.9515;ERATE=0.0006;THETA=0.0009;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 2402192 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.914;LDAF=0.0097;AVGPOST=0.9963;RSQ=0.8492;ERATE=0.0006;THETA=0.0014;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2402367 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0175;AVGPOST=0.9988;RSQ=0.9705;ERATE=0.0004;THETA=0.0026;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 2402482 . T TG 37 PASS INDEL;BAVGPOST=0.991;BRSQ=0.402;LDAF=0.0181;AVGPOST=0.9710;RSQ=0.3199;ERATE=0.0029;THETA=0.0016;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2402499 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.964;LDAF=0.6511;AVGPOST=0.9598;RSQ=0.9375;ERATE=0.0008;THETA=0.0045;AC=1435;AN=2184 GT:DS:GL:BD 0.65705127 1
1 2402619 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0180;AVGPOST=0.9977;RSQ=0.9469;ERATE=0.0006;THETA=0.0072;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 2402637 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.964;LDAF=0.0188;AVGPOST=0.9979;RSQ=0.9610;ERATE=0.0004;THETA=0.0099;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 2402740 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.759;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6253;ERATE=0.0008;THETA=0.0107;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2402802 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.678;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.5903;ERATE=0.0006;THETA=0.0129;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2402807 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4241;ERATE=0.0004;THETA=0.0040;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2402818 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.753;LDAF=0.0017;AVGPOST=0.9979;RSQ=0.5163;ERATE=0.0006;THETA=0.0035;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2402862 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4498;ERATE=0.0004;THETA=0.0089;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2402990 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5002;ERATE=0.0004;THETA=0.0098;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2403135 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.765;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5682;ERATE=0.0004;THETA=0.0107;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2403223 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.910;LDAF=0.0082;AVGPOST=0.9974;RSQ=0.8932;ERATE=0.0005;THETA=0.0086;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2403577 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.615;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.3133;ERATE=0.0005;THETA=0.0034;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2403640 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0006;AVGPOST=0.9989;RSQ=0.0649;ERATE=0.0005;THETA=0.0125;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 2403854 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.861;BRSQ=0.757;LDAF=0.4121;AVGPOST=0.7920;RSQ=0.6931;ERATE=0.0150;THETA=0.0108;AC=857;AN=2184 GT:DS:GL:BD 0.39239928 0
1 2403887 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.551;LDAF=0.0120;AVGPOST=0.9920;RSQ=0.7143;ERATE=0.0007;THETA=0.0041;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 2403892 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.582;LDAF=0.0030;AVGPOST=0.9968;RSQ=0.5230;ERATE=0.0005;THETA=0.0099;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2403945 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.660;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4202;ERATE=0.0004;THETA=0.0066;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2404057 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.651;LDAF=0.0027;AVGPOST=0.9971;RSQ=0.5157;ERATE=0.0008;THETA=0.0037;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2404074 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.727;LDAF=0.0047;AVGPOST=0.9973;RSQ=0.8003;ERATE=0.0004;THETA=0.0077;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2404111 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.785;LDAF=0.0214;AVGPOST=0.9910;RSQ=0.8493;ERATE=0.0004;THETA=0.0183;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 2404238 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.604;LDAF=0.0071;AVGPOST=0.9926;RSQ=0.6154;ERATE=0.0005;THETA=0.0170;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2404242 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.3776;ERATE=0.0003;THETA=0.0099;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2404246 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.841;LDAF=0.0051;AVGPOST=0.9975;RSQ=0.7878;ERATE=0.0005;THETA=0.0140;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2404252 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.431;LDAF=0.0021;AVGPOST=0.9967;RSQ=0.3789;ERATE=0.0005;THETA=0.0072;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2404256 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.869;BRSQ=0.751;LDAF=0.3466;AVGPOST=0.8587;RSQ=0.7711;ERATE=0.0165;THETA=0.0157;AC=689;AN=2184 GT:DS:GL:BD 0.31547618 0
1 2404291 . GT G 855 PASS INDEL;BAVGPOST=0.992;BRSQ=0.738;LDAF=0.0092;AVGPOST=0.9939;RSQ=0.7284;ERATE=0.0008;THETA=0.0142;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2404307 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.944;BRSQ=0.785;LDAF=0.1155;AVGPOST=0.9395;RSQ=0.7955;ERATE=0.0009;THETA=0.0098;AC=211;AN=2184 GT:DS:GL:BD 0.09661172 0
1 2404321 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.901;BRSQ=0.772;LDAF=0.2368;AVGPOST=0.8985;RSQ=0.7913;ERATE=0.0045;THETA=0.0129;AC=466;AN=2184 GT:DS:GL:BD 0.21336997 0
1 2404358 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.631;LDAF=0.0053;AVGPOST=0.9958;RSQ=0.6695;ERATE=0.0006;THETA=0.0210;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2404401 rs34886292 C CA 45890 PASS INDEL;BAVGPOST=0.891;BRSQ=0.808;LDAF=0.5991;AVGPOST=0.8951;RSQ=0.8465;ERATE=0.0007;THETA=0.0025;AC=1322;AN=2184 GT:DS:GL:BD 0.60531133 1
1 2404402 . A AC 14202 PASS INDEL;BAVGPOST=0.890;BRSQ=0.808;LDAF=0.5964;AVGPOST=0.8928;RSQ=0.8428;ERATE=0.0008;THETA=0.0085;AC=1318;AN=2184 GT:DS:GL:BD 0.60347986 1
1 2404426 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.901;LDAF=0.0088;AVGPOST=0.9978;RSQ=0.8921;ERATE=0.0004;THETA=0.0224;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2404432 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7279;ERATE=0.0005;THETA=0.0195;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2404449 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.658;LDAF=0.0022;AVGPOST=0.9989;RSQ=0.7706;ERATE=0.0004;THETA=0.0124;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2404510 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.736;LDAF=0.0031;AVGPOST=0.9981;RSQ=0.7049;ERATE=0.0009;THETA=0.0189;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2404511 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.658;LDAF=0.0196;AVGPOST=0.9832;RSQ=0.6458;ERATE=0.0008;THETA=0.0197;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 2404547 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.648;LDAF=0.0020;AVGPOST=0.9973;RSQ=0.4116;ERATE=0.0009;THETA=0.0269;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2404563 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.736;LDAF=0.0111;AVGPOST=0.9920;RSQ=0.6844;ERATE=0.0007;THETA=0.0178;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2404607 . CT C 337 PASS INDEL;BAVGPOST=0.996;BRSQ=0.707;LDAF=0.0070;AVGPOST=0.9928;RSQ=0.5596;ERATE=0.0010;THETA=0.0012;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2404617 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0024;AVGPOST=0.9969;RSQ=0.4886;ERATE=0.0005;THETA=0.0102;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2404667 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.749;LDAF=0.0029;AVGPOST=0.9982;RSQ=0.7192;ERATE=0.0005;THETA=0.0068;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2404894 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4488;ERATE=0.0005;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2404923 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.746;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4406;ERATE=0.0006;THETA=0.0114;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2404956 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.662;LDAF=0.0082;AVGPOST=0.9918;RSQ=0.6032;ERATE=0.0010;THETA=0.0151;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2404996 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.784;LDAF=0.0235;AVGPOST=0.9836;RSQ=0.7243;ERATE=0.0030;THETA=0.0298;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 2405045 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.947;BRSQ=0.844;LDAF=0.1359;AVGPOST=0.9558;RSQ=0.8960;ERATE=0.0017;THETA=0.0192;AC=282;AN=2184 GT:DS:GL:BD 0.12912089 0
1 2405089 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.687;LDAF=0.0025;AVGPOST=0.9972;RSQ=0.5221;ERATE=0.0007;THETA=0.0080;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2405099 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5229;ERATE=0.0006;THETA=0.0339;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2405286 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.795;LDAF=0.0104;AVGPOST=0.9946;RSQ=0.7874;ERATE=0.0004;THETA=0.0161;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2405475 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.674;LDAF=0.0027;AVGPOST=0.9970;RSQ=0.4783;ERATE=0.0006;THETA=0.0291;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2405681 . GC G 928 PASS INDEL;BAVGPOST=0.985;BRSQ=0.677;LDAF=0.0163;AVGPOST=0.9890;RSQ=0.7326;ERATE=0.0005;THETA=0.0132;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 2405710 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.780;LDAF=0.0024;AVGPOST=0.9976;RSQ=0.5469;ERATE=0.0004;THETA=0.0102;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2405737 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.519;LDAF=0.0040;AVGPOST=0.9952;RSQ=0.5349;ERATE=0.0006;THETA=0.0308;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2405832 . GA G 5846 PASS INDEL;BAVGPOST=0.781;BRSQ=0.666;LDAF=0.5880;AVGPOST=0.8127;RSQ=0.7371;ERATE=0.0013;THETA=0.0036;AC=1334;AN=2184 GT:DS:GL:BD 0.61080587 1
1 2405834 rs113289194 AG A 30185 PASS INDEL;BAVGPOST=0.808;BRSQ=0.687;LDAF=0.6090;AVGPOST=0.8290;RSQ=0.7610;ERATE=0.0006;THETA=0.0019;AC=1351;AN=2184 GT:DS:GL:BD 0.61858976 1
1 2405837 . GA G 7003 PASS INDEL;BAVGPOST=0.792;BRSQ=0.675;LDAF=0.5925;AVGPOST=0.8152;RSQ=0.7374;ERATE=0.0030;THETA=0.0120;AC=1326;AN=2184 GT:DS:GL:BD 0.60714287 1
1 2405952 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.733;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5002;ERATE=0.0005;THETA=0.0076;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2405997 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0087;AVGPOST=0.9963;RSQ=0.8216;ERATE=0.0003;THETA=0.0077;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 2406086 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.731;LDAF=0.0035;AVGPOST=0.9985;RSQ=0.8195;ERATE=0.0005;THETA=0.0170;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2406104 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0090;AVGPOST=0.9971;RSQ=0.8584;ERATE=0.0005;THETA=0.0018;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2406329 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.479;LDAF=0.0045;AVGPOST=0.9961;RSQ=0.6484;ERATE=0.0003;THETA=0.0077;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2406343 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.630;LDAF=0.0044;AVGPOST=0.9951;RSQ=0.5131;ERATE=0.0008;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2406355 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.710;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6641;ERATE=0.0003;THETA=0.0168;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2406366 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.943;LDAF=0.0223;AVGPOST=0.9952;RSQ=0.9186;ERATE=0.0003;THETA=0.0086;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 2406472 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.788;LDAF=0.0127;AVGPOST=0.9929;RSQ=0.7797;ERATE=0.0012;THETA=0.0086;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 2406586 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0053;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2406646 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.795;LDAF=0.0280;AVGPOST=0.9911;RSQ=0.8733;ERATE=0.0008;THETA=0.0016;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 2406657 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.916;LDAF=0.0158;AVGPOST=0.9961;RSQ=0.9013;ERATE=0.0005;THETA=0.0041;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 2406721 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0104;AVGPOST=0.9963;RSQ=0.8582;ERATE=0.0005;THETA=0.0138;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2406757 rs58416950 GGAGCCAGTA G 4645 PASS INDEL;BAVGPOST=0.983;BRSQ=0.746;LDAF=0.0292;AVGPOST=0.9857;RSQ=0.8027;ERATE=0.0012;THETA=0.0096;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 2406795 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.683;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4194;ERATE=0.0007;THETA=0.0040;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2406815 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.754;LDAF=0.0041;AVGPOST=0.9972;RSQ=0.6964;ERATE=0.0008;THETA=0.0063;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2406887 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.964;BRSQ=0.869;LDAF=0.1487;AVGPOST=0.9487;RSQ=0.8467;ERATE=0.0006;THETA=0.0081;AC=293;AN=2184 GT:DS:GL:BD 0.13415751 0
1 2406990 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.793;LDAF=0.0033;AVGPOST=0.9988;RSQ=0.8395;ERATE=0.0007;THETA=0.0029;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2407125 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0093;AVGPOST=0.9980;RSQ=0.9114;ERATE=0.0003;THETA=0.0128;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2407126 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.647;LDAF=0.0025;AVGPOST=0.9978;RSQ=0.6040;ERATE=0.0006;THETA=0.0078;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2407148 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.766;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0003;THETA=0.0056;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2407344 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.455;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.4880;ERATE=0.0004;THETA=0.0078;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2407483 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.439;LDAF=0.0039;AVGPOST=0.9950;RSQ=0.4521;ERATE=0.0015;THETA=0.0101;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2407781 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.828;LDAF=0.0418;AVGPOST=0.9797;RSQ=0.8089;ERATE=0.0004;THETA=0.0048;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 2407927 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.583;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.4846;ERATE=0.0004;THETA=0.0065;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2407980 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.813;LDAF=0.0055;AVGPOST=0.9984;RSQ=0.8743;ERATE=0.0004;THETA=0.0055;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2407991 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5324;ERATE=0.0003;THETA=0.0070;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2408021 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.728;LDAF=0.0014;AVGPOST=0.9979;RSQ=0.4245;ERATE=0.0004;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2408110 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.820;LDAF=0.0139;AVGPOST=0.9944;RSQ=0.8513;ERATE=0.0004;THETA=0.0044;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 2408266 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.613;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.7478;ERATE=0.0005;THETA=0.0021;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2408283 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.749;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2408318 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.889;LDAF=0.0080;AVGPOST=0.9977;RSQ=0.8750;ERATE=0.0003;THETA=0.0020;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2408379 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0082;AVGPOST=0.9968;RSQ=0.8498;ERATE=0.0006;THETA=0.0025;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 2408471 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0098;AVGPOST=0.9991;RSQ=0.9609;ERATE=0.0003;THETA=0.0042;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 2408545 . ACT A 38 PASS INDEL;BAVGPOST=0.999;BRSQ=0.621;LDAF=0.0020;AVGPOST=0.9974;RSQ=0.4801;ERATE=0.0006;THETA=0.0095;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2408571 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0053;AVGPOST=0.9984;RSQ=0.8745;ERATE=0.0004;THETA=0.0014;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2408585 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.887;LDAF=0.0081;AVGPOST=0.9984;RSQ=0.9159;ERATE=0.0004;THETA=0.0074;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2408625 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.644;LDAF=0.0090;AVGPOST=0.9906;RSQ=0.5725;ERATE=0.0009;THETA=0.0113;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2408661 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.957;LDAF=0.7024;AVGPOST=0.9642;RSQ=0.9369;ERATE=0.0005;THETA=0.0056;AC=1544;AN=2184 GT:DS:GL:BD 0.70695972 1
1 2408779 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.724;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.6545;ERATE=0.0006;THETA=0.0034;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2408834 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.752;LDAF=0.0608;AVGPOST=0.9658;RSQ=0.7755;ERATE=0.0008;THETA=0.0026;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 2408878 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.588;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.4668;ERATE=0.0006;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2408895 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.666;LDAF=0.0067;AVGPOST=0.9940;RSQ=0.6318;ERATE=0.0031;THETA=0.0029;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2408901 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.674;LDAF=0.0033;AVGPOST=0.9974;RSQ=0.7001;ERATE=0.0008;THETA=0.0061;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2408930 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0095;AVGPOST=0.9992;RSQ=0.9630;ERATE=0.0003;THETA=0.0053;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2408985 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2409019 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5396;ERATE=0.0005;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2409141 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.5787;ERATE=0.0004;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2409235 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.825;LDAF=0.0266;AVGPOST=0.9912;RSQ=0.8694;ERATE=0.0005;THETA=0.0015;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 2409238 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.764;LDAF=0.0037;AVGPOST=0.9970;RSQ=0.6543;ERATE=0.0006;THETA=0.0021;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2409276 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.978;LDAF=0.6432;AVGPOST=0.9834;RSQ=0.9719;ERATE=0.0015;THETA=0.0013;AC=1409;AN=2184 GT:DS:GL:BD 0.64514655 1
1 2409330 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.634;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4543;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2409340 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0102;AVGPOST=0.9986;RSQ=0.9315;ERATE=0.0005;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 2409360 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.930;BRSQ=0.871;LDAF=0.5616;AVGPOST=0.9170;RSQ=0.8762;ERATE=0.0053;THETA=0.0016;AC=1256;AN=2184 GT:DS:GL:BD 0.57509160 1
1 2409383 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.965;LDAF=0.1337;AVGPOST=0.9842;RSQ=0.9475;ERATE=0.0006;THETA=0.0008;AC=287;AN=2184 GT:DS:GL:BD 0.13141026 0
1 2409385 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0059;AVGPOST=0.9947;RSQ=0.6892;ERATE=0.0004;THETA=0.0037;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2409811 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0063;AVGPOST=0.9973;RSQ=0.8348;ERATE=0.0004;THETA=0.0028;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2409849 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.756;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5198;ERATE=0.0003;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2409892 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.6858;AVGPOST=0.9952;RSQ=0.9920;ERATE=0.0005;THETA=0.0019;AC=1499;AN=2184 GT:DS:GL:BD 0.68635529 1
1 2410115 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.751;LDAF=0.0053;AVGPOST=0.9969;RSQ=0.7608;ERATE=0.0007;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2410286 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.633;LDAF=0.0030;AVGPOST=0.9967;RSQ=0.5212;ERATE=0.0007;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2410453 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4053;ERATE=0.0007;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2410484 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0048;AVGPOST=0.9987;RSQ=0.8840;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2410607 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0031;AVGPOST=0.9985;RSQ=0.7950;ERATE=0.0004;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2410698 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0090;AVGPOST=0.9991;RSQ=0.9527;ERATE=0.0005;THETA=0.0008;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 2410711 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.871;LDAF=0.0199;AVGPOST=0.9948;RSQ=0.9049;ERATE=0.0004;THETA=0.0022;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 2410789 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.985;LDAF=0.6120;AVGPOST=0.9870;RSQ=0.9806;ERATE=0.0007;THETA=0.0007;AC=1341;AN=2184 GT:DS:GL:BD 0.61401099 1
1 2411127 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.780;LDAF=0.0120;AVGPOST=0.9936;RSQ=0.7826;ERATE=0.0009;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 2411250 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4503;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2411279 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5938;ERATE=0.0004;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2411391 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4943;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2411435 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8523;ERATE=0.0004;THETA=0.0018;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2411451 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.989;LDAF=0.6417;AVGPOST=0.9896;RSQ=0.9831;ERATE=0.0027;THETA=0.0006;AC=1405;AN=2184 GT:DS:GL:BD 0.64331502 1
1 2411523 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.964;LDAF=0.0253;AVGPOST=0.9976;RSQ=0.9634;ERATE=0.0004;THETA=0.0008;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 2411636 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.6973;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2411713 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2411730 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2411789 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.967;LDAF=0.0117;AVGPOST=0.9994;RSQ=0.9741;ERATE=0.0004;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 2411798 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.693;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2411986 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.809;LDAF=0.0029;AVGPOST=0.9978;RSQ=0.6762;ERATE=0.0005;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2412121 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.901;LDAF=0.0080;AVGPOST=0.9984;RSQ=0.9060;ERATE=0.0005;THETA=0.0025;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2412225 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.772;LDAF=0.0043;AVGPOST=0.9984;RSQ=0.8224;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2412279 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.6276;AVGPOST=0.9911;RSQ=0.9851;ERATE=0.0013;THETA=0.0006;AC=1374;AN=2184 GT:DS:GL:BD 0.62912089 1
1 2412293 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.976;LDAF=0.1334;AVGPOST=0.9900;RSQ=0.9686;ERATE=0.0005;THETA=0.0008;AC=286;AN=2184 GT:DS:GL:BD 0.13095239 0
1 2412378 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5771;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2412442 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0023;AVGPOST=0.9987;RSQ=0.7347;ERATE=0.0003;THETA=0.0016;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2412452 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2412453 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.832;LDAF=0.0042;AVGPOST=0.9982;RSQ=0.8197;ERATE=0.0006;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2412533 . GCA G 11 PASS INDEL;BAVGPOST=0.996;BRSQ=0.567;LDAF=0.0053;AVGPOST=0.9943;RSQ=0.5663;ERATE=0.0023;THETA=0.0016;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2412567 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.780;LDAF=0.0034;AVGPOST=0.9978;RSQ=0.7150;ERATE=0.0006;THETA=0.0032;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2412574 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5045;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2412588 . CCT C 94 PASS INDEL;BAVGPOST=1.000;BRSQ=0.762;LDAF=0.0021;AVGPOST=0.9974;RSQ=0.4565;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2412650 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.875;LDAF=0.0066;AVGPOST=0.9968;RSQ=0.7699;ERATE=0.0004;THETA=0.0012;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2412929 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.769;LDAF=0.0128;AVGPOST=0.9948;RSQ=0.8160;ERATE=0.0010;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 2412986 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0118;AVGPOST=0.9992;RSQ=0.9668;ERATE=0.0004;THETA=0.0008;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 2413077 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6420;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2413139 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0035;AVGPOST=0.9989;RSQ=0.8595;ERATE=0.0009;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2413149 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.956;LDAF=0.0119;AVGPOST=0.9990;RSQ=0.9609;ERATE=0.0005;THETA=0.0009;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 2413166 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.696;LDAF=0.0174;AVGPOST=0.9920;RSQ=0.8096;ERATE=0.0004;THETA=0.0009;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 2413225 . AG A 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.658;LDAF=0.0020;AVGPOST=0.9969;RSQ=0.3312;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2413251 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0032;AVGPOST=0.9984;RSQ=0.7994;ERATE=0.0004;THETA=0.0017;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2413382 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0026;AVGPOST=0.9984;RSQ=0.7354;ERATE=0.0005;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2413384 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0059;AVGPOST=0.9988;RSQ=0.9333;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2413464 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0093;AVGPOST=0.9995;RSQ=0.9740;ERATE=0.0003;THETA=0.0007;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2413498 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.812;LDAF=0.0023;AVGPOST=0.9988;RSQ=0.7529;ERATE=0.0006;THETA=0.0025;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2413621 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0070;AVGPOST=0.9975;RSQ=0.8854;ERATE=0.0004;THETA=0.0012;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2413626 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4653;ERATE=0.0005;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2413634 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.6263;AVGPOST=0.9921;RSQ=0.9868;ERATE=0.0007;THETA=0.0017;AC=1372;AN=2184 GT:DS:GL:BD 0.62820512 1
1 2413796 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0052;AVGPOST=0.9979;RSQ=0.8215;ERATE=0.0006;THETA=0.0048;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2413895 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.600;LDAF=0.0024;AVGPOST=0.9975;RSQ=0.5468;ERATE=0.0007;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2414000 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0053;AVGPOST=0.9984;RSQ=0.8575;ERATE=0.0006;THETA=0.0046;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2414044 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.456;LDAF=0.0030;AVGPOST=0.9966;RSQ=0.5252;ERATE=0.0006;THETA=0.0026;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2414119 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.808;LDAF=0.0087;AVGPOST=0.9970;RSQ=0.8642;ERATE=0.0006;THETA=0.0008;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2414412 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.741;LDAF=0.0029;AVGPOST=0.9975;RSQ=0.6360;ERATE=0.0009;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2414564 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9244;ERATE=0.0004;THETA=0.0046;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2414589 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.724;LDAF=0.0026;AVGPOST=0.9987;RSQ=0.7810;ERATE=0.0005;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2414763 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.834;LDAF=0.0022;AVGPOST=0.9989;RSQ=0.7648;ERATE=0.0005;THETA=0.0040;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2414777 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5326;ERATE=0.0004;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2414849 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7758;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2414896 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.949;LDAF=0.0391;AVGPOST=0.9958;RSQ=0.9637;ERATE=0.0004;THETA=0.0010;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 2414928 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.990;LDAF=0.5989;AVGPOST=0.9858;RSQ=0.9788;ERATE=0.0010;THETA=0.0018;AC=1309;AN=2184 GT:DS:GL:BD 0.59935898 1
1 2414944 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.680;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5461;ERATE=0.0004;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2415055 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.825;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.7290;ERATE=0.0006;THETA=0.0040;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2415108 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.939;LDAF=0.0137;AVGPOST=0.9966;RSQ=0.8993;ERATE=0.0004;THETA=0.0018;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 2415189 . T TGTTGACCCCCGTGTGGGGGGC 20091 PASS INDEL;BAVGPOST=0.923;BRSQ=0.883;LDAF=0.5990;AVGPOST=0.9320;RSQ=0.9004;ERATE=0.0027;THETA=0.0013;AC=1330;AN=2184 GT:DS:GL:BD 0.60897434 1
1 2415195 rs70956306 C CCCCCGTGTGGGGGGCGCTGA 15603 PASS INDEL;BAVGPOST=0.919;BRSQ=0.871;LDAF=0.5951;AVGPOST=0.9373;RSQ=0.9084;ERATE=0.0014;THETA=0.0006;AC=1325;AN=2184 GT:DS:GL:BD 0.60668498 1
1 2415202 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.844;BRSQ=0.586;LDAF=0.2646;AVGPOST=0.8261;RSQ=0.6072;ERATE=0.0189;THETA=0.0030;AC=475;AN=2184 GT:DS:GL:BD 0.21749084 0
1 2415203 rs70956306 TG T 9251 PASS INDEL;BAVGPOST=0.720;BRSQ=0.460;LDAF=0.3731;AVGPOST=0.7456;RSQ=0.5228;ERATE=0.0320;THETA=0.0014;AC=742;AN=2184 GT:DS:GL:BD 0.33974358 0
1 2415213 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.867;BRSQ=0.489;LDAF=0.1601;AVGPOST=0.8712;RSQ=0.6071;ERATE=0.0107;THETA=0.0010;AC=255;AN=2184 GT:DS:GL:BD 0.11675824 0
1 2415218 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.858;BRSQ=0.577;LDAF=0.2327;AVGPOST=0.8445;RSQ=0.6195;ERATE=0.0134;THETA=0.0009;AC=407;AN=2184 GT:DS:GL:BD 0.18635531 0
1 2415224 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.840;BRSQ=0.522;LDAF=0.2258;AVGPOST=0.8168;RSQ=0.5453;ERATE=0.0360;THETA=0.0090;AC=379;AN=2184 GT:DS:GL:BD 0.17353480 0
1 2415230 . G GT 820 PASS INDEL;BAVGPOST=0.925;BRSQ=0.464;LDAF=0.0904;AVGPOST=0.9038;RSQ=0.5462;ERATE=0.0067;THETA=0.0059;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 2415252 rs33917914 GT G 1484 PASS INDEL;BAVGPOST=0.871;BRSQ=0.296;LDAF=0.1646;AVGPOST=0.7952;RSQ=0.3594;ERATE=0.0257;THETA=0.0065;AC=165;AN=2184 GT:DS:GL:BD 0.07554945 0
1 2415270 rs35850445 TG T 2386 PASS INDEL;BAVGPOST=0.722;BRSQ=0.550;LDAF=0.5086;AVGPOST=0.7382;RSQ=0.6081;ERATE=0.0146;THETA=0.0010;AC=1153;AN=2184 GT:DS:GL:BD 0.52793038 1
1 2415274 . GGT G 2414 PASS INDEL;BAVGPOST=0.757;BRSQ=0.629;LDAF=0.5001;AVGPOST=0.7763;RSQ=0.6873;ERATE=0.0066;THETA=0.0010;AC=1148;AN=2184 GT:DS:GL:BD 0.52564102 1
1 2415297 . GT G 353 PASS INDEL;BAVGPOST=0.872;BRSQ=0.216;LDAF=0.1445;AVGPOST=0.8085;RSQ=0.3576;ERATE=0.0154;THETA=0.0005;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 2415298 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.788;BRSQ=0.250;LDAF=0.2282;AVGPOST=0.7319;RSQ=0.3437;ERATE=0.0354;THETA=0.0024;AC=257;AN=2184 GT:DS:GL:BD 0.11767399 0
1 2415319 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.744;BRSQ=0.582;LDAF=0.5213;AVGPOST=0.7609;RSQ=0.6431;ERATE=0.0214;THETA=0.0048;AC=1183;AN=2184 GT:DS:GL:BD 0.54166669 1
1 2415329 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.672;BRSQ=0.417;LDAF=0.3948;AVGPOST=0.7190;RSQ=0.5121;ERATE=0.0244;THETA=0.0033;AC=796;AN=2184 GT:DS:GL:BD 0.36446887 0
1 2415338 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.908;BRSQ=0.263;LDAF=0.1142;AVGPOST=0.8334;RSQ=0.3341;ERATE=0.0134;THETA=0.0110;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 2415350 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.633;BRSQ=0.394;LDAF=0.2929;AVGPOST=0.7526;RSQ=0.5263;ERATE=0.0062;THETA=0.0050;AC=568;AN=2184 GT:DS:GL:BD 0.26007327 0
1 2415351 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.684;BRSQ=0.201;LDAF=0.2796;AVGPOST=0.6858;RSQ=0.3444;ERATE=0.0295;THETA=0.0006;AC=382;AN=2184 GT:DS:GL:BD 0.17490843 0
1 2415360 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.641;BRSQ=0.403;LDAF=0.3151;AVGPOST=0.7405;RSQ=0.5189;ERATE=0.0047;THETA=0.0087;AC=608;AN=2184 GT:DS:GL:BD 0.27838829 0
1 2415373 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.832;BRSQ=0.163;LDAF=0.1246;AVGPOST=0.8139;RSQ=0.3273;ERATE=0.0080;THETA=0.0044;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 2415384 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.608;BRSQ=0.311;LDAF=0.3501;AVGPOST=0.6894;RSQ=0.4464;ERATE=0.0158;THETA=0.0006;AC=668;AN=2184 GT:DS:GL:BD 0.30586082 0
1 2415392 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.913;BRSQ=0.154;LDAF=0.0994;AVGPOST=0.8404;RSQ=0.2518;ERATE=0.0136;THETA=0.0015;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 2415394 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.639;BRSQ=0.391;LDAF=0.3344;AVGPOST=0.7558;RSQ=0.6042;ERATE=0.0015;THETA=0.0021;AC=711;AN=2184 GT:DS:GL:BD 0.32554945 0
1 2415401 . TG T 154 PASS INDEL;BAVGPOST=0.884;BRSQ=0.142;LDAF=0.1104;AVGPOST=0.8272;RSQ=0.2583;ERATE=0.0100;THETA=0.0044;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 2415403 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.889;BRSQ=0.243;LDAF=0.1092;AVGPOST=0.8609;RSQ=0.4240;ERATE=0.0048;THETA=0.0047;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 2415415 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.721;BRSQ=0.542;LDAF=0.4168;AVGPOST=0.7977;RSQ=0.6897;ERATE=0.0043;THETA=0.0018;AC=939;AN=2184 GT:DS:GL:BD 0.42994505 0
1 2415416 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.824;BRSQ=0.248;LDAF=0.1553;AVGPOST=0.8043;RSQ=0.3958;ERATE=0.0102;THETA=0.0030;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 2415425 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.771;BRSQ=0.629;LDAF=0.4678;AVGPOST=0.8003;RSQ=0.7030;ERATE=0.0037;THETA=0.0006;AC=1065;AN=2184 GT:DS:GL:BD 0.48763737 0
1 2415437 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.897;BRSQ=0.277;LDAF=0.0834;AVGPOST=0.8922;RSQ=0.4394;ERATE=0.0016;THETA=0.0013;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 2415447 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.883;BRSQ=0.810;LDAF=0.5670;AVGPOST=0.8290;RSQ=0.7450;ERATE=0.0168;THETA=0.0095;AC=1273;AN=2184 GT:DS:GL:BD 0.58287543 1
1 2415479 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.683;LDAF=0.0248;AVGPOST=0.9799;RSQ=0.6626;ERATE=0.0036;THETA=0.0038;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 2415492 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.883;LDAF=0.0109;AVGPOST=0.9957;RSQ=0.8475;ERATE=0.0008;THETA=0.0021;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 2415495 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.864;LDAF=0.0106;AVGPOST=0.9985;RSQ=0.9380;ERATE=0.0005;THETA=0.0019;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 2415497 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.976;LDAF=0.5975;AVGPOST=0.9811;RSQ=0.9711;ERATE=0.0014;THETA=0.0028;AC=1312;AN=2184 GT:DS:GL:BD 0.60073262 1
1 2415500 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.377;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4012;ERATE=0.0008;THETA=0.0059;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2415545 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.961;LDAF=0.0254;AVGPOST=0.9980;RSQ=0.9734;ERATE=0.0004;THETA=0.0029;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 2415675 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.881;LDAF=0.0166;AVGPOST=0.9959;RSQ=0.9074;ERATE=0.0004;THETA=0.0009;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 2415679 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7063;ERATE=0.0004;THETA=0.0043;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2415712 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.793;LDAF=0.0023;AVGPOST=0.9988;RSQ=0.7960;ERATE=0.0006;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2415725 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0097;AVGPOST=0.9995;RSQ=0.9789;ERATE=0.0003;THETA=0.0023;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 2415883 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0169;AVGPOST=0.9984;RSQ=0.9656;ERATE=0.0004;THETA=0.0029;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 2415951 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5782;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2416068 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6526;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2416109 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6495;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2416158 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0047;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2416214 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8057;ERATE=0.0004;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2416263 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5201;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2416357 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.994;LDAF=0.6002;AVGPOST=0.9893;RSQ=0.9837;ERATE=0.0005;THETA=0.0005;AC=1311;AN=2184 GT:DS:GL:BD 0.60027474 1
1 2416383 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0004;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2416388 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0081;AVGPOST=0.9991;RSQ=0.9538;ERATE=0.0004;THETA=0.0007;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2416530 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.707;LDAF=0.0073;AVGPOST=0.9942;RSQ=0.6802;ERATE=0.0018;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2416711 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5035;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2417120 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.759;LDAF=0.0020;AVGPOST=0.9978;RSQ=0.5910;ERATE=0.0005;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2417416 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.762;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4253;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2417423 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0054;AVGPOST=0.9980;RSQ=0.8522;ERATE=0.0006;THETA=0.0016;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2417462 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0050;AVGPOST=0.9980;RSQ=0.8564;ERATE=0.0004;THETA=0.0010;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2417683 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.636;LDAF=0.0028;AVGPOST=0.9978;RSQ=0.6504;ERATE=0.0009;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2417902 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0043;AVGPOST=0.9984;RSQ=0.8295;ERATE=0.0005;THETA=0.0012;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2417930 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0204;AVGPOST=0.9980;RSQ=0.9571;ERATE=0.0004;THETA=0.0030;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 2417939 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0032;AVGPOST=0.9982;RSQ=0.7953;ERATE=0.0004;THETA=0.0029;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2417958 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.6031;AVGPOST=0.9920;RSQ=0.9872;ERATE=0.0007;THETA=0.0028;AC=1319;AN=2184 GT:DS:GL:BD 0.60393775 1
1 2418019 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2418032 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0045;AVGPOST=0.9994;RSQ=0.9450;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2418074 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9996;RSQ=0.9584;ERATE=0.0004;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2418160 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7882;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2418167 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0063;AVGPOST=0.9985;RSQ=0.9310;ERATE=0.0003;THETA=0.0009;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2418190 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2418191 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8902;ERATE=0.0003;THETA=0.0043;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2418424 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2418492 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2418602 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.896;LDAF=0.0141;AVGPOST=0.9959;RSQ=0.8893;ERATE=0.0024;THETA=0.0027;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2418625 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1340;AVGPOST=0.9988;RSQ=0.9957;ERATE=0.0003;THETA=0.0009;AC=293;AN=2184 GT:DS:GL:BD 0.13415751 0
1 2418718 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9203;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2418737 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8303;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2418890 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0065;AVGPOST=0.9997;RSQ=0.9799;ERATE=0.0004;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2418890 rs111260262 C CG 602 PASS INDEL;BAVGPOST=0.997;BRSQ=0.896;LDAF=0.0115;AVGPOST=0.9965;RSQ=0.8639;ERATE=0.0008;THETA=0.0008;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 2418895 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0065;AVGPOST=0.9986;RSQ=0.9281;ERATE=0.0004;THETA=0.0022;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2418935 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.6225;AVGPOST=0.9951;RSQ=0.9915;ERATE=0.0006;THETA=0.0011;AC=1362;AN=2184 GT:DS:GL:BD 0.62362635 1
1 2419415 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.912;LDAF=0.0158;AVGPOST=0.9951;RSQ=0.8853;ERATE=0.0011;THETA=0.0037;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 2419447 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4339;ERATE=0.0003;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2419650 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7386;ERATE=0.0004;THETA=0.0085;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2419764 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.774;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8539;ERATE=0.0004;THETA=0.0022;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2419771 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0145;AVGPOST=0.9989;RSQ=0.9710;ERATE=0.0003;THETA=0.0011;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 2420063 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0022;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2420069 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.851;LDAF=0.0027;AVGPOST=0.9983;RSQ=0.7053;ERATE=0.0011;THETA=0.0027;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2420098 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.985;LDAF=0.1332;AVGPOST=0.9946;RSQ=0.9828;ERATE=0.0004;THETA=0.0011;AC=292;AN=2184 GT:DS:GL:BD 0.13369964 0
1 2420137 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4081;ERATE=0.0006;THETA=0.0075;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2420233 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0102;AVGPOST=0.9993;RSQ=0.9743;ERATE=0.0003;THETA=0.0013;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 2420265 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.811;LDAF=0.0072;AVGPOST=0.9971;RSQ=0.8465;ERATE=0.0004;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2420266 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9558;ERATE=0.0003;THETA=0.0015;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2420307 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0113;AVGPOST=0.9993;RSQ=0.9749;ERATE=0.0003;THETA=0.0013;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 2420393 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2420410 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0107;AVGPOST=0.9994;RSQ=0.9739;ERATE=0.0005;THETA=0.0041;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 2420495 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0056;AVGPOST=0.9986;RSQ=0.8859;ERATE=0.0005;THETA=0.0130;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2420531 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2420551 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9346;ERATE=0.0003;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2420557 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0008;THETA=0.0016;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2420590 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.920;LDAF=0.8419;AVGPOST=0.9676;RSQ=0.9179;ERATE=0.0095;THETA=0.0011;AC=1854;AN=2184 GT:DS:GL:BD 0.84890109 1
1 2420613 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6908;ERATE=0.0004;THETA=0.0036;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2420667 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0013;AVGPOST=0.9997;RSQ=0.9118;ERATE=0.0003;THETA=0.0024;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2420863 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0005;THETA=0.0033;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2420913 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.980;LDAF=0.6691;AVGPOST=0.9862;RSQ=0.9768;ERATE=0.0011;THETA=0.0081;AC=1463;AN=2184 GT:DS:GL:BD 0.66987181 1
1 2420955 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0004;THETA=0.0232;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2421026 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0090;AVGPOST=0.9982;RSQ=0.9250;ERATE=0.0008;THETA=0.0019;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2421073 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9244;ERATE=0.0003;THETA=0.0067;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2421117 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9205;ERATE=0.0006;THETA=0.0045;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2421121 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0152;AVGPOST=0.9981;RSQ=0.9497;ERATE=0.0005;THETA=0.0076;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 2421165 . CA C 54 PASS INDEL;BAVGPOST=1.000;BRSQ=0.734;LDAF=0.0013;AVGPOST=0.9981;RSQ=0.3223;ERATE=0.0005;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2421243 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0072;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2421279 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9152;ERATE=0.0008;THETA=0.0039;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2421386 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2421426 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9555;ERATE=0.0003;THETA=0.0103;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2421439 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0004;THETA=0.0039;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2421553 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0010;AVGPOST=0.9987;RSQ=0.4210;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2421683 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.619;LDAF=0.0008;AVGPOST=0.9989;RSQ=0.4382;ERATE=0.0005;THETA=0.0071;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2421830 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.744;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.4613;ERATE=0.0004;THETA=0.0088;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2421841 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0103;AVGPOST=0.9984;RSQ=0.9258;ERATE=0.0005;THETA=0.0043;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 2421858 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0103;AVGPOST=0.9984;RSQ=0.9325;ERATE=0.0004;THETA=0.0093;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 2421873 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.747;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5378;ERATE=0.0005;THETA=0.0054;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2421989 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.747;LDAF=0.0011;AVGPOST=0.9984;RSQ=0.3445;ERATE=0.0007;THETA=0.0012;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 2421994 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.751;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5951;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2422014 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.764;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4206;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2422244 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.5683;ERATE=0.0006;THETA=0.0082;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2422281 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.764;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4486;ERATE=0.0004;THETA=0.0052;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2422309 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.574;LDAF=0.0023;AVGPOST=0.9987;RSQ=0.7478;ERATE=0.0004;THETA=0.0014;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2422409 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.698;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5415;ERATE=0.0005;THETA=0.0068;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2422412 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.698;LDAF=0.0029;AVGPOST=0.9961;RSQ=0.5204;ERATE=0.0006;THETA=0.0057;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2422458 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.775;LDAF=0.0143;AVGPOST=0.9939;RSQ=0.8369;ERATE=0.0004;THETA=0.0039;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 2422614 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.7710;AVGPOST=0.9958;RSQ=0.9913;ERATE=0.0008;THETA=0.0025;AC=1686;AN=2184 GT:DS:GL:BD 0.77197802 1
1 2422631 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0004;THETA=0.0018;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2422961 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0215;AVGPOST=0.9973;RSQ=0.9581;ERATE=0.0005;THETA=0.0027;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 2422985 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6210;ERATE=0.0005;THETA=0.0031;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2423061 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.758;LDAF=0.0024;AVGPOST=0.9983;RSQ=0.6874;ERATE=0.0006;THETA=0.0017;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2423260 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0110;AVGPOST=0.9971;RSQ=0.8936;ERATE=0.0005;THETA=0.0007;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 2423309 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.748;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4488;ERATE=0.0004;THETA=0.0048;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2423363 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0196;AVGPOST=0.9953;RSQ=0.9080;ERATE=0.0006;THETA=0.0009;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 2423380 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.764;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5077;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2423385 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.620;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4036;ERATE=0.0007;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2423418 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.817;LDAF=0.0252;AVGPOST=0.9881;RSQ=0.8326;ERATE=0.0006;THETA=0.0024;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 2423566 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.8304;AVGPOST=0.9934;RSQ=0.9829;ERATE=0.0008;THETA=0.0047;AC=1818;AN=2184 GT:DS:GL:BD 0.83241761 1
1 2423582 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7664;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2423674 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.832;LDAF=0.0022;AVGPOST=0.9991;RSQ=0.8083;ERATE=0.0003;THETA=0.0031;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2424015 . CT C 222 PASS INDEL;BAVGPOST=0.999;BRSQ=0.697;LDAF=0.0037;AVGPOST=0.9948;RSQ=0.3869;ERATE=0.0012;THETA=0.0032;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2424026 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0105;AVGPOST=0.9991;RSQ=0.9664;ERATE=0.0003;THETA=0.0022;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 2424122 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.946;LDAF=0.0507;AVGPOST=0.9936;RSQ=0.9492;ERATE=0.0004;THETA=0.0010;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 2424143 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.652;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4853;ERATE=0.0004;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2424307 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6075;ERATE=0.0006;THETA=0.0041;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2424319 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.771;LDAF=0.0177;AVGPOST=0.9922;RSQ=0.8162;ERATE=0.0005;THETA=0.0047;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 2424417 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.8471;AVGPOST=0.9900;RSQ=0.9718;ERATE=0.0008;THETA=0.0005;AC=1854;AN=2184 GT:DS:GL:BD 0.84890109 1
1 2424541 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0061;AVGPOST=0.9981;RSQ=0.8596;ERATE=0.0005;THETA=0.0017;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2424617 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8864;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2424633 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0062;AVGPOST=0.9994;RSQ=0.9550;ERATE=0.0004;THETA=0.0018;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2424711 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0111;AVGPOST=0.9987;RSQ=0.9539;ERATE=0.0005;THETA=0.0007;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 2424751 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.713;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0004;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2424765 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.982;LDAF=0.4157;AVGPOST=0.9840;RSQ=0.9766;ERATE=0.0015;THETA=0.0006;AC=909;AN=2184 GT:DS:GL:BD 0.41620880 0
1 2424795 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0045;AVGPOST=0.9958;RSQ=0.6854;ERATE=0.0006;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2424831 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.709;LDAF=0.0076;AVGPOST=0.9955;RSQ=0.7680;ERATE=0.0006;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2424851 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5072;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2424894 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.988;LDAF=0.3755;AVGPOST=0.9886;RSQ=0.9816;ERATE=0.0011;THETA=0.0013;AC=820;AN=2184 GT:DS:GL:BD 0.37545788 0
1 2425048 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.868;LDAF=0.0075;AVGPOST=0.9962;RSQ=0.7937;ERATE=0.0005;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2425084 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0036;AVGPOST=0.9963;RSQ=0.5549;ERATE=0.0016;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2425118 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.778;LDAF=0.0162;AVGPOST=0.9904;RSQ=0.7570;ERATE=0.0015;THETA=0.0035;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 2425167 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.620;LDAF=0.0048;AVGPOST=0.9980;RSQ=0.8336;ERATE=0.0004;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2425168 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6076;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2425287 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6624;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2425338 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7347;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2425374 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0021;AVGPOST=0.9982;RSQ=0.6318;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2425413 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.778;LDAF=0.0028;AVGPOST=0.9972;RSQ=0.6188;ERATE=0.0004;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2425427 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4570;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2425433 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.825;LDAF=0.0040;AVGPOST=0.9968;RSQ=0.7087;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2425499 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.4227;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2425665 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.8986;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2425710 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5466;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2425941 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6077;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2425942 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6238;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2425992 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.8304;AVGPOST=0.9953;RSQ=0.9870;ERATE=0.0012;THETA=0.0004;AC=1817;AN=2184 GT:DS:GL:BD 0.83195972 1
1 2426013 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4226;ERATE=0.0004;THETA=0.0034;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2426047 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.796;LDAF=0.0103;AVGPOST=0.9958;RSQ=0.8328;ERATE=0.0005;THETA=0.0007;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 2426077 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.488;LDAF=0.0023;AVGPOST=0.9986;RSQ=0.7103;ERATE=0.0005;THETA=0.0048;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2426149 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.3277;AVGPOST=0.9938;RSQ=0.9891;ERATE=0.0006;THETA=0.0005;AC=717;AN=2184 GT:DS:GL:BD 0.32829669 0
1 2426248 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0136;AVGPOST=0.9989;RSQ=0.9622;ERATE=0.0005;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 2426264 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.695;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6607;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2426313 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.964;LDAF=0.0311;AVGPOST=0.9963;RSQ=0.9529;ERATE=0.0006;THETA=0.0005;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 2426557 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4444;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2426598 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0125;AVGPOST=0.9988;RSQ=0.9562;ERATE=0.0004;THETA=0.0009;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 2426662 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.590;LDAF=0.0030;AVGPOST=0.9953;RSQ=0.3438;ERATE=0.0007;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2426689 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.3284;AVGPOST=0.9940;RSQ=0.9898;ERATE=0.0008;THETA=0.0006;AC=716;AN=2184 GT:DS:GL:BD 0.32783884 0
1 2426721 . CT C 44 PASS INDEL;BAVGPOST=0.999;BRSQ=0.639;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8072;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2426757 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0127;AVGPOST=0.9976;RSQ=0.9230;ERATE=0.0004;THETA=0.0007;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 2426766 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.991;LDAF=0.4487;AVGPOST=0.9824;RSQ=0.9760;ERATE=0.0018;THETA=0.0005;AC=982;AN=2184 GT:DS:GL:BD 0.44963369 0
1 2426813 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.560;LDAF=0.0029;AVGPOST=0.9977;RSQ=0.6752;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2426837 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.737;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4466;ERATE=0.0004;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2426960 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0004;AVGPOST=0.9995;RSQ=0.5552;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2427134 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.562;LDAF=0.0024;AVGPOST=0.9984;RSQ=0.7213;ERATE=0.0007;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2427275 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.568;LDAF=0.0043;AVGPOST=0.9965;RSQ=0.6545;ERATE=0.0009;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2427340 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.972;LDAF=0.3941;AVGPOST=0.9824;RSQ=0.9717;ERATE=0.0009;THETA=0.0003;AC=862;AN=2184 GT:DS:GL:BD 0.39468864 0
1 2427368 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.3264;AVGPOST=0.9865;RSQ=0.9784;ERATE=0.0006;THETA=0.0045;AC=712;AN=2184 GT:DS:GL:BD 0.32600734 0
1 2427712 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.987;LDAF=0.3992;AVGPOST=0.9845;RSQ=0.9771;ERATE=0.0022;THETA=0.0006;AC=871;AN=2184 GT:DS:GL:BD 0.39880952 0
1 2427793 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0134;AVGPOST=0.9986;RSQ=0.9578;ERATE=0.0004;THETA=0.0007;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2428121 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8313;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2428334 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8292;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2428427 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8241;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2428484 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0114;AVGPOST=0.9996;RSQ=0.9856;ERATE=0.0003;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 2428534 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.7038;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2428719 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0166;AVGPOST=0.9957;RSQ=0.9057;ERATE=0.0008;THETA=0.0002;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 2428740 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.676;LDAF=0.0047;AVGPOST=0.9963;RSQ=0.6954;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2428836 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8653;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2428874 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.8443;AVGPOST=0.9971;RSQ=0.9915;ERATE=0.0005;THETA=0.0002;AC=1847;AN=2184 GT:DS:GL:BD 0.84569597 1
1 2428936 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7511;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2429171 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.797;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8483;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2429529 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.870;LDAF=0.0084;AVGPOST=0.9973;RSQ=0.8505;ERATE=0.0008;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2429649 . ACT A 31 PASS INDEL;BAVGPOST=0.999;BRSQ=0.565;LDAF=0.0034;AVGPOST=0.9941;RSQ=0.2747;ERATE=0.0012;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2429722 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.946;LDAF=0.0328;AVGPOST=0.9963;RSQ=0.9530;ERATE=0.0005;THETA=0.0043;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 2429800 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0126;AVGPOST=0.9984;RSQ=0.9415;ERATE=0.0006;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 2430344 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0028;AVGPOST=0.9969;RSQ=0.5434;ERATE=0.0006;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2430470 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0113;AVGPOST=0.9979;RSQ=0.9208;ERATE=0.0006;THETA=0.0007;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 2430617 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.4344;AVGPOST=0.9937;RSQ=0.9912;ERATE=0.0017;THETA=0.0003;AC=951;AN=2184 GT:DS:GL:BD 0.43543956 0
1 2430706 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0045;AVGPOST=0.9992;RSQ=0.9159;ERATE=0.0004;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2430871 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0121;AVGPOST=0.9967;RSQ=0.8838;ERATE=0.0009;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 2430889 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.797;LDAF=0.0060;AVGPOST=0.9973;RSQ=0.8043;ERATE=0.0006;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2431031 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2431057 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3374;AVGPOST=0.9957;RSQ=0.9934;ERATE=0.0024;THETA=0.0004;AC=736;AN=2184 GT:DS:GL:BD 0.33699635 0
1 2431099 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0102;AVGPOST=0.9992;RSQ=0.9681;ERATE=0.0003;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 2431102 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0100;AVGPOST=0.9991;RSQ=0.9562;ERATE=0.0005;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 2431127 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2431375 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0103;AVGPOST=0.9990;RSQ=0.9580;ERATE=0.0005;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 2431813 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6426;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2431854 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.859;LDAF=0.0135;AVGPOST=0.9926;RSQ=0.8215;ERATE=0.0006;THETA=0.0009;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 2431892 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.443;LDAF=0.0016;AVGPOST=0.9976;RSQ=0.5151;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2432053 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.848;LDAF=0.0057;AVGPOST=0.9933;RSQ=0.5460;ERATE=0.0005;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2432196 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.779;LDAF=0.0285;AVGPOST=0.9771;RSQ=0.6922;ERATE=0.0007;THETA=0.0004;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 2432277 . C CCT 286 PASS INDEL;BAVGPOST=0.785;BRSQ=0.081;LDAF=0.2134;AVGPOST=0.7056;RSQ=0.2690;ERATE=0.0196;THETA=0.0004;AC=212;AN=2184 GT:DS:GL:BD 0.09706960 0
1 2432331 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.964;BRSQ=0.936;LDAF=0.4194;AVGPOST=0.9777;RSQ=0.9676;ERATE=0.0018;THETA=0.0019;AC=919;AN=2184 GT:DS:GL:BD 0.42078754 0
1 2432464 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3521;AVGPOST=0.9940;RSQ=0.9901;ERATE=0.0007;THETA=0.0005;AC=770;AN=2184 GT:DS:GL:BD 0.35256410 0
1 2432510 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.663;LDAF=0.0030;AVGPOST=0.9949;RSQ=0.2790;ERATE=0.0007;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2432535 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.751;LDAF=0.0169;AVGPOST=0.9909;RSQ=0.8088;ERATE=0.0004;THETA=0.0009;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 2432749 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3268;AVGPOST=0.9928;RSQ=0.9865;ERATE=0.0012;THETA=0.0006;AC=712;AN=2184 GT:DS:GL:BD 0.32600734 0
1 2432761 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0063;AVGPOST=0.9979;RSQ=0.8609;ERATE=0.0004;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2432762 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4173;AVGPOST=0.9938;RSQ=0.9903;ERATE=0.0007;THETA=0.0005;AC=913;AN=2184 GT:DS:GL:BD 0.41804031 0
1 2432867 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0045;AVGPOST=0.9991;RSQ=0.9086;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2432957 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2433044 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.796;LDAF=0.0231;AVGPOST=0.9908;RSQ=0.8465;ERATE=0.0004;THETA=0.0003;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 2433133 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6165;ERATE=0.0006;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2433163 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0019;AVGPOST=0.9992;RSQ=0.8270;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2433290 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4846;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2433333 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.776;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4203;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2433367 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0008;AVGPOST=0.9984;RSQ=0.0957;ERATE=0.0005;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 2433389 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0027;AVGPOST=0.9977;RSQ=0.6481;ERATE=0.0007;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2433409 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.522;LDAF=0.0060;AVGPOST=0.9907;RSQ=0.3827;ERATE=0.0017;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2433410 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8596;ERATE=0.0005;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2433425 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0069;AVGPOST=0.9971;RSQ=0.8249;ERATE=0.0008;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2433601 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0044;AVGPOST=0.9991;RSQ=0.9012;ERATE=0.0005;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2433629 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.635;LDAF=0.0035;AVGPOST=0.9968;RSQ=0.6239;ERATE=0.0007;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2433642 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.689;LDAF=0.0043;AVGPOST=0.9964;RSQ=0.6448;ERATE=0.0006;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2433773 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.495;LDAF=0.0096;AVGPOST=0.9872;RSQ=0.4082;ERATE=0.0017;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2433894 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0110;AVGPOST=0.9963;RSQ=0.8655;ERATE=0.0005;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 2433900 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.988;LDAF=0.4543;AVGPOST=0.9863;RSQ=0.9803;ERATE=0.0009;THETA=0.0004;AC=994;AN=2184 GT:DS:GL:BD 0.45512819 0
1 2433914 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.492;LDAF=0.0053;AVGPOST=0.9934;RSQ=0.4634;ERATE=0.0008;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2433973 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.538;LDAF=0.0080;AVGPOST=0.9931;RSQ=0.6575;ERATE=0.0007;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2433974 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.877;LDAF=0.0197;AVGPOST=0.9932;RSQ=0.8408;ERATE=0.0009;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 2433975 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0092;AVGPOST=0.9962;RSQ=0.8265;ERATE=0.0005;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2433985 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.420;LDAF=0.0028;AVGPOST=0.9957;RSQ=0.3406;ERATE=0.0007;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2434017 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.591;LDAF=0.0121;AVGPOST=0.9859;RSQ=0.5242;ERATE=0.0016;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 2434171 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.710;LDAF=0.0099;AVGPOST=0.9918;RSQ=0.6478;ERATE=0.0012;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2434441 . GCCT G 1396 PASS INDEL;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0093;AVGPOST=0.9965;RSQ=0.8427;ERATE=0.0004;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2434464 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0043;AVGPOST=0.9982;RSQ=0.8267;ERATE=0.0005;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2434523 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2434564 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4279;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2434661 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0121;AVGPOST=0.9984;RSQ=0.9382;ERATE=0.0005;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 2434702 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.700;LDAF=0.0069;AVGPOST=0.9954;RSQ=0.7549;ERATE=0.0004;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2434744 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1579;AVGPOST=0.9965;RSQ=0.9900;ERATE=0.0004;THETA=0.0007;AC=343;AN=2184 GT:DS:GL:BD 0.15705128 0
1 2434979 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0084;AVGPOST=0.9921;RSQ=0.6186;ERATE=0.0008;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2435072 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.713;LDAF=0.0028;AVGPOST=0.9976;RSQ=0.6237;ERATE=0.0008;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2435101 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.731;LDAF=0.0051;AVGPOST=0.9929;RSQ=0.5386;ERATE=0.0007;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2435648 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0041;AVGPOST=0.9964;RSQ=0.6364;ERATE=0.0005;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2435738 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0207;AVGPOST=0.9989;RSQ=0.9749;ERATE=0.0005;THETA=0.0006;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 2435749 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.535;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.5494;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2435759 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0059;AVGPOST=0.9991;RSQ=0.9408;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2435776 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0064;AVGPOST=0.9987;RSQ=0.9138;ERATE=0.0006;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2435830 . TTCC T 45 PASS INDEL;BAVGPOST=0.998;BRSQ=0.474;LDAF=0.0043;AVGPOST=0.9942;RSQ=0.4810;ERATE=0.0006;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2435972 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9460;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2436256 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.697;LDAF=0.0153;AVGPOST=0.9904;RSQ=0.7463;ERATE=0.0005;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 2436271 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.693;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7094;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2436303 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0174;AVGPOST=0.9983;RSQ=0.9588;ERATE=0.0004;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 2436404 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0346;AVGPOST=0.9977;RSQ=0.9719;ERATE=0.0005;THETA=0.0009;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 2436506 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.659;LDAF=0.0062;AVGPOST=0.9976;RSQ=0.8238;ERATE=0.0006;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2436605 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.679;LDAF=0.0038;AVGPOST=0.9968;RSQ=0.6261;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2436655 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0066;AVGPOST=0.9977;RSQ=0.8487;ERATE=0.0007;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2436743 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.684;LDAF=0.0045;AVGPOST=0.9955;RSQ=0.6254;ERATE=0.0006;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2436762 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.410;LDAF=0.0026;AVGPOST=0.9957;RSQ=0.2963;ERATE=0.0009;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2436778 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.3785;AVGPOST=0.9851;RSQ=0.9776;ERATE=0.0017;THETA=0.0005;AC=826;AN=2184 GT:DS:GL:BD 0.37820512 0
1 2437053 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.699;LDAF=0.0054;AVGPOST=0.9954;RSQ=0.6398;ERATE=0.0007;THETA=0.0025;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2437112 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.572;LDAF=0.0044;AVGPOST=0.9961;RSQ=0.6340;ERATE=0.0008;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2437263 . CACTT C 158 PASS INDEL;BAVGPOST=0.998;BRSQ=0.694;LDAF=0.0036;AVGPOST=0.9962;RSQ=0.6350;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2437305 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3756;AVGPOST=0.9941;RSQ=0.9909;ERATE=0.0011;THETA=0.0006;AC=821;AN=2184 GT:DS:GL:BD 0.37591577 0
1 2437383 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.7018;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2437394 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.762;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4961;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2437400 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=0.9979;RSQ=0.8599;ERATE=0.0005;THETA=0.0018;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2437451 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0125;AVGPOST=0.9986;RSQ=0.9493;ERATE=0.0005;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 2437581 . AG A 17 PASS INDEL;BAVGPOST=0.999;BRSQ=0.585;LDAF=0.0031;AVGPOST=0.9952;RSQ=0.3072;ERATE=0.0007;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2437658 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0023;AVGPOST=0.9984;RSQ=0.7094;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2437663 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.593;LDAF=0.0027;AVGPOST=0.9969;RSQ=0.5752;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2437716 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.590;LDAF=0.0059;AVGPOST=0.9938;RSQ=0.6435;ERATE=0.0004;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2437754 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0145;AVGPOST=0.9975;RSQ=0.9164;ERATE=0.0007;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2437895 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3262;AVGPOST=0.9953;RSQ=0.9914;ERATE=0.0010;THETA=0.0004;AC=711;AN=2184 GT:DS:GL:BD 0.32554945 0
1 2437945 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.593;LDAF=0.0032;AVGPOST=0.9963;RSQ=0.4805;ERATE=0.0007;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2438072 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.5344;ERATE=0.0007;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2438122 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.508;LDAF=0.0054;AVGPOST=0.9922;RSQ=0.4048;ERATE=0.0011;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2438167 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.968;LDAF=0.0556;AVGPOST=0.9903;RSQ=0.9310;ERATE=0.0005;THETA=0.0002;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 2438229 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.757;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6353;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2438283 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2438307 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3266;AVGPOST=0.9979;RSQ=0.9964;ERATE=0.0004;THETA=0.0005;AC=713;AN=2184 GT:DS:GL:BD 0.32646519 0
1 2438393 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.994;LDAF=0.3266;AVGPOST=0.9961;RSQ=0.9928;ERATE=0.0008;THETA=0.0005;AC=713;AN=2184 GT:DS:GL:BD 0.32646519 0
1 2438612 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3274;AVGPOST=0.9971;RSQ=0.9949;ERATE=0.0007;THETA=0.0002;AC=715;AN=2184 GT:DS:GL:BD 0.32738096 0
1 2438627 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.697;LDAF=0.0032;AVGPOST=0.9963;RSQ=0.5251;ERATE=0.0009;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2438653 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.948;LDAF=0.0126;AVGPOST=0.9983;RSQ=0.9400;ERATE=0.0004;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 2438763 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0117;AVGPOST=0.9995;RSQ=0.9792;ERATE=0.0004;THETA=0.0012;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 2438768 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.7903;AVGPOST=0.9968;RSQ=0.9923;ERATE=0.0004;THETA=0.0003;AC=1728;AN=2184 GT:DS:GL:BD 0.79120880 1
1 2438828 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3779;AVGPOST=0.9950;RSQ=0.9925;ERATE=0.0012;THETA=0.0004;AC=826;AN=2184 GT:DS:GL:BD 0.37820512 0
1 2438866 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0116;AVGPOST=0.9960;RSQ=0.8606;ERATE=0.0008;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 2438962 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0059;AVGPOST=0.9987;RSQ=0.9027;ERATE=0.0005;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2438982 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3434;AVGPOST=0.9955;RSQ=0.9926;ERATE=0.0010;THETA=0.0021;AC=749;AN=2184 GT:DS:GL:BD 0.34294870 0
1 2439080 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0156;AVGPOST=0.9978;RSQ=0.9451;ERATE=0.0003;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 2439191 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3344;AVGPOST=0.9889;RSQ=0.9815;ERATE=0.0016;THETA=0.0004;AC=724;AN=2184 GT:DS:GL:BD 0.33150184 0
1 2439219 . TG T 54 PASS INDEL;BAVGPOST=0.999;BRSQ=0.607;LDAF=0.0019;AVGPOST=0.9973;RSQ=0.4335;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2439234 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0116;AVGPOST=0.9997;RSQ=0.9885;ERATE=0.0003;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 2439276 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0023;AVGPOST=0.9975;RSQ=0.5847;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2439417 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0209;AVGPOST=0.9991;RSQ=0.9795;ERATE=0.0005;THETA=0.0005;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 2439438 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.720;LDAF=0.0025;AVGPOST=0.9982;RSQ=0.6851;ERATE=0.0005;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2439533 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.703;LDAF=0.0171;AVGPOST=0.9846;RSQ=0.6734;ERATE=0.0006;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 2439599 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.8100;AVGPOST=0.9918;RSQ=0.9797;ERATE=0.0012;THETA=0.0004;AC=1774;AN=2184 GT:DS:GL:BD 0.81227106 1
1 2439617 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5493;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2439681 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8227;AVGPOST=0.9974;RSQ=0.9928;ERATE=0.0005;THETA=0.0004;AC=1799;AN=2184 GT:DS:GL:BD 0.82371795 1
1 2439685 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4503;AVGPOST=0.9971;RSQ=0.9957;ERATE=0.0004;THETA=0.0005;AC=984;AN=2184 GT:DS:GL:BD 0.45054945 0
1 2439687 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0044;AVGPOST=0.9967;RSQ=0.7296;ERATE=0.0007;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2439704 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0036;AVGPOST=0.9984;RSQ=0.8119;ERATE=0.0005;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2439929 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.916;LDAF=0.0245;AVGPOST=0.9860;RSQ=0.7737;ERATE=0.0022;THETA=0.0006;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 2439947 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0122;AVGPOST=0.9884;RSQ=0.6355;ERATE=0.0010;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2439948 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.552;LDAF=0.0114;AVGPOST=0.9857;RSQ=0.5190;ERATE=0.0012;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2440171 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8061;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2440281 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2440303 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0001;AVGPOST=0.9998;RSQ=0.0498;ERATE=0.0003;THETA=0.0012;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 2440456 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2440518 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0045;AVGPOST=0.9994;RSQ=0.9454;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2440524 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8888;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2440568 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2440675 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0256;AVGPOST=0.9979;RSQ=0.9666;ERATE=0.0003;THETA=0.0006;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 2440681 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0058;AVGPOST=0.9992;RSQ=0.9402;ERATE=0.0004;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2440786 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5572;ERATE=0.0007;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2440831 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9426;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2440838 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7687;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2440987 . GAC G 58 PASS INDEL;BAVGPOST=0.999;BRSQ=0.630;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5093;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2441006 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0083;AVGPOST=0.9986;RSQ=0.9324;ERATE=0.0003;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2441020 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.980;LDAF=0.0409;AVGPOST=0.9972;RSQ=0.9686;ERATE=0.0004;THETA=0.0007;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 2441060 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0099;AVGPOST=0.9988;RSQ=0.9532;ERATE=0.0004;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 2441192 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9411;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2441194 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2441272 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2441358 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3899;AVGPOST=1.0000;RSQ=0.9999;ERATE=0.0003;THETA=0.0004;AC=852;AN=2184 GT:DS:GL:BD 0.39010990 0
1 2441385 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2441392 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3898;AVGPOST=0.9999;RSQ=0.9998;ERATE=0.0004;THETA=0.0013;AC=852;AN=2184 GT:DS:GL:BD 0.39010990 0
1 2441457 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8562;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2441466 . GC G 113 PASS INDEL;BAVGPOST=0.996;BRSQ=0.649;LDAF=0.0147;AVGPOST=0.9787;RSQ=0.4136;ERATE=0.0035;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2441524 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2441664 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0023;AVGPOST=0.9983;RSQ=0.7237;ERATE=0.0007;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2441722 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.698;LDAF=0.0021;AVGPOST=0.9974;RSQ=0.5168;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2441782 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.664;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5467;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2441935 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0026;AVGPOST=0.9983;RSQ=0.6997;ERATE=0.0009;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2442082 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2442098 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2442374 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3282;AVGPOST=0.9991;RSQ=0.9983;ERATE=0.0003;THETA=0.0002;AC=717;AN=2184 GT:DS:GL:BD 0.32829669 0
1 2442386 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.762;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8132;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2442473 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0028;AVGPOST=0.9976;RSQ=0.6306;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2442517 . AG A 61 PASS INDEL;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0023;AVGPOST=0.9985;RSQ=0.7031;ERATE=0.0006;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2442686 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.912;LDAF=0.0141;AVGPOST=0.9974;RSQ=0.9265;ERATE=0.0004;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2442725 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0222;AVGPOST=0.9994;RSQ=0.9898;ERATE=0.0003;THETA=0.0004;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 2442731 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2442858 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0004;AVGPOST=0.9998;RSQ=0.8054;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2442866 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2442913 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2442953 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3269;AVGPOST=0.9995;RSQ=0.9991;ERATE=0.0003;THETA=0.0003;AC=714;AN=2184 GT:DS:GL:BD 0.32692307 0
1 2443135 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2443212 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3301;AVGPOST=0.9997;RSQ=0.9994;ERATE=0.0006;THETA=0.0002;AC=721;AN=2184 GT:DS:GL:BD 0.33012819 0
1 2443319 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.979;LDAF=0.0271;AVGPOST=0.9998;RSQ=0.9966;ERATE=0.0003;THETA=0.0008;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 2443326 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.739;LDAF=0.0015;AVGPOST=0.9990;RSQ=0.7336;ERATE=0.0006;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2443356 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9133;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2443543 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8412;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2443577 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0118;AVGPOST=0.9992;RSQ=0.9684;ERATE=0.0004;THETA=0.0007;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 2443655 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.939;LDAF=0.2258;AVGPOST=0.9861;RSQ=0.9697;ERATE=0.0006;THETA=0.0005;AC=489;AN=2184 GT:DS:GL:BD 0.22390109 0
1 2443690 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5713;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2443743 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0126;AVGPOST=0.9988;RSQ=0.9539;ERATE=0.0006;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 2443748 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.555;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.4442;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2443903 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8374;ERATE=0.0006;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2443911 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0028;AVGPOST=0.9988;RSQ=0.8228;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2443948 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0120;AVGPOST=0.9978;RSQ=0.9222;ERATE=0.0004;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 2444012 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2444038 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0076;AVGPOST=0.9990;RSQ=0.9428;ERATE=0.0004;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2444055 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.764;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5897;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2444126 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.743;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8359;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2444141 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8951;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2444145 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.558;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6318;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2444164 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0057;AVGPOST=0.9990;RSQ=0.9227;ERATE=0.0004;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2444226 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3891;AVGPOST=0.9988;RSQ=0.9981;ERATE=0.0004;THETA=0.0007;AC=850;AN=2184 GT:DS:GL:BD 0.38919413 0
1 2444244 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8634;ERATE=0.0008;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2444309 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2444314 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=1.0000;RSQ=0.9947;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2444323 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7497;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2444335 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2444341 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2444414 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2790;AVGPOST=0.9968;RSQ=0.9947;ERATE=0.0004;THETA=0.0003;AC=610;AN=2184 GT:DS:GL:BD 0.27930403 0
1 2444469 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9792;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2444470 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0133;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0010;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2444482 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2444635 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8174;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2444643 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0114;AVGPOST=0.9999;RSQ=0.9942;ERATE=0.0003;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 2444644 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5873;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2444889 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.623;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6430;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2444925 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0021;AVGPOST=0.9989;RSQ=0.7772;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2444935 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0206;AVGPOST=0.9998;RSQ=0.9946;ERATE=0.0003;THETA=0.0004;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 2444953 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0132;AVGPOST=0.9984;RSQ=0.9454;ERATE=0.0004;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 2444986 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0127;AVGPOST=0.9963;RSQ=0.8881;ERATE=0.0005;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 2445089 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3551;AVGPOST=0.9987;RSQ=0.9975;ERATE=0.0005;THETA=0.0002;AC=776;AN=2184 GT:DS:GL:BD 0.35531136 0
1 2445399 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2445406 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.992;LDAF=0.3858;AVGPOST=0.9950;RSQ=0.9929;ERATE=0.0040;THETA=0.0003;AC=843;AN=2184 GT:DS:GL:BD 0.38598901 0
1 2445410 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0115;AVGPOST=0.9999;RSQ=0.9961;ERATE=0.0004;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 2445576 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0554;AVGPOST=0.9996;RSQ=0.9968;ERATE=0.0003;THETA=0.0007;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 2445578 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7633;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2445606 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.854;LDAF=0.0027;AVGPOST=0.9980;RSQ=0.7638;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2445748 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.948;LDAF=0.0255;AVGPOST=0.9963;RSQ=0.9410;ERATE=0.0181;THETA=0.0004;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 2445778 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2445893 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9282;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2445896 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2446034 . C CT 492 PASS INDEL;BAVGPOST=0.912;BRSQ=0.350;LDAF=0.1228;AVGPOST=0.8860;RSQ=0.6079;ERATE=0.0065;THETA=0.0001;AC=208;AN=2184 GT:DS:GL:BD 0.09523810 0
1 2446038 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.939;BRSQ=0.287;LDAF=0.0823;AVGPOST=0.9105;RSQ=0.5715;ERATE=0.0075;THETA=0.0004;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 2446229 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.685;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6538;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2446241 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.709;LDAF=0.0069;AVGPOST=0.9909;RSQ=0.4797;ERATE=0.0006;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2446260 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.724;LDAF=0.0026;AVGPOST=0.9970;RSQ=0.5154;ERATE=0.0008;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2446330 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3940;AVGPOST=0.9952;RSQ=0.9930;ERATE=0.0007;THETA=0.0006;AC=862;AN=2184 GT:DS:GL:BD 0.39468864 0
1 2446339 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.637;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4913;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2446596 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0055;AVGPOST=0.9951;RSQ=0.6466;ERATE=0.0015;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2446600 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.951;LDAF=0.0147;AVGPOST=0.9965;RSQ=0.9018;ERATE=0.0011;THETA=0.0007;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2446711 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0333;AVGPOST=0.9990;RSQ=0.9873;ERATE=0.0005;THETA=0.0006;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 2446818 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9605;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2446880 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3912;AVGPOST=0.9996;RSQ=0.9993;ERATE=0.0003;THETA=0.0009;AC=855;AN=2184 GT:DS:GL:BD 0.39148352 0
1 2446960 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.3880;AVGPOST=0.9961;RSQ=0.9947;ERATE=0.0011;THETA=0.0005;AC=850;AN=2184 GT:DS:GL:BD 0.38919413 0
1 2446961 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0057;AVGPOST=0.9996;RSQ=0.9694;ERATE=0.0004;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2446963 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2446990 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0270;AVGPOST=0.9999;RSQ=0.9983;ERATE=0.0003;THETA=0.0004;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 2447028 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8689;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2447051 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9181;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2447082 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2447091 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2447106 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2447172 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2447205 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0022;AVGPOST=0.9975;RSQ=0.5828;ERATE=0.0012;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2447241 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9999;RSQ=0.9881;ERATE=0.0003;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2447268 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0121;AVGPOST=0.9996;RSQ=0.9836;ERATE=0.0006;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 2447291 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0112;AVGPOST=0.9990;RSQ=0.9626;ERATE=0.0004;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 2447414 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0023;AVGPOST=0.9986;RSQ=0.7590;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2447526 . CCT C 70 PASS INDEL;BAVGPOST=0.999;BRSQ=0.549;LDAF=0.0022;AVGPOST=0.9972;RSQ=0.5972;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2447695 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0030;AVGPOST=0.9983;RSQ=0.7577;ERATE=0.0006;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2447790 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.920;LDAF=0.0118;AVGPOST=0.9957;RSQ=0.8700;ERATE=0.0005;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 2447815 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.785;LDAF=0.0199;AVGPOST=0.9882;RSQ=0.7606;ERATE=0.0004;THETA=0.0006;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 2447910 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3285;AVGPOST=0.9974;RSQ=0.9950;ERATE=0.0007;THETA=0.0002;AC=717;AN=2184 GT:DS:GL:BD 0.32829669 0
1 2447925 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.975;LDAF=0.0312;AVGPOST=0.9990;RSQ=0.9859;ERATE=0.0004;THETA=0.0004;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 2447982 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0034;AVGPOST=0.9994;RSQ=0.9102;ERATE=0.0007;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2447989 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0316;AVGPOST=0.9984;RSQ=0.9788;ERATE=0.0004;THETA=0.0002;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 2448127 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.528;LDAF=0.0078;AVGPOST=0.9934;RSQ=0.6454;ERATE=0.0008;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2448188 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.3311;AVGPOST=0.9955;RSQ=0.9917;ERATE=0.0010;THETA=0.0006;AC=724;AN=2184 GT:DS:GL:BD 0.33150184 0
1 2448221 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.639;LDAF=0.0023;AVGPOST=0.9985;RSQ=0.7002;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2448553 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.856;LDAF=0.0076;AVGPOST=0.9985;RSQ=0.9093;ERATE=0.0004;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2448561 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3555;AVGPOST=0.9982;RSQ=0.9967;ERATE=0.0005;THETA=0.0002;AC=776;AN=2184 GT:DS:GL:BD 0.35531136 0
1 2448653 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0021;AVGPOST=0.9969;RSQ=0.3474;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2448705 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.786;LDAF=0.0053;AVGPOST=0.9963;RSQ=0.7504;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2448726 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8483;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2448764 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3948;AVGPOST=0.9959;RSQ=0.9940;ERATE=0.0009;THETA=0.0007;AC=861;AN=2184 GT:DS:GL:BD 0.39423078 0
1 2448868 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0346;AVGPOST=0.9987;RSQ=0.9854;ERATE=0.0004;THETA=0.0003;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 2448939 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.720;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5559;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2448964 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.559;LDAF=0.0109;AVGPOST=0.9956;RSQ=0.8267;ERATE=0.0009;THETA=0.0007;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 2449074 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.689;LDAF=0.0028;AVGPOST=0.9968;RSQ=0.5638;ERATE=0.0006;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2449192 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0271;AVGPOST=0.9996;RSQ=0.9932;ERATE=0.0003;THETA=0.0005;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 2449203 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0060;AVGPOST=0.9982;RSQ=0.8651;ERATE=0.0004;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2449301 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0029;AVGPOST=0.9988;RSQ=0.8146;ERATE=0.0007;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2449353 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0270;AVGPOST=0.9998;RSQ=0.9967;ERATE=0.0003;THETA=0.0002;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 2449367 . T TA 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4772;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2449396 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2449407 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8981;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2449417 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2449582 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8742;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2449619 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6818;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2449639 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2449660 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2449711 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0311;AVGPOST=0.9991;RSQ=0.9902;ERATE=0.0004;THETA=0.0002;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 2449716 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2449788 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2449814 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8316;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2449879 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0275;AVGPOST=0.9989;RSQ=0.9828;ERATE=0.0004;THETA=0.0005;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 2449924 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0165;AVGPOST=0.9989;RSQ=0.9683;ERATE=0.0004;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 2449936 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.669;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5749;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2449937 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7905;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2449946 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8036;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2449947 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0022;AVGPOST=0.9989;RSQ=0.8293;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2450092 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8829;ERATE=0.0008;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2450126 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0341;AVGPOST=0.9984;RSQ=0.9824;ERATE=0.0005;THETA=0.0004;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 2450143 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0035;AVGPOST=0.9990;RSQ=0.8784;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2450151 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7664;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2450310 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.870;LDAF=0.0068;AVGPOST=0.9965;RSQ=0.7994;ERATE=0.0004;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 2450394 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3906;AVGPOST=0.9984;RSQ=0.9976;ERATE=0.0004;THETA=0.0004;AC=854;AN=2184 GT:DS:GL:BD 0.39102563 0
1 2450502 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0125;AVGPOST=0.9998;RSQ=0.9919;ERATE=0.0006;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 2450544 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.0043;AVGPOST=0.9994;RSQ=0.9522;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2450571 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2450860 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9310;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2450887 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.7518;ERATE=0.0004;THETA=0.0021;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2450928 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.854;LDAF=0.0047;AVGPOST=0.9992;RSQ=0.9393;ERATE=0.0003;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2450934 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7301;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2451039 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0056;AVGPOST=0.9993;RSQ=0.9462;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2451045 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0037;AVGPOST=0.9990;RSQ=0.9014;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2451046 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6392;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2451058 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7308;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2451071 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.6075;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2451229 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0034;AVGPOST=0.9984;RSQ=0.8040;ERATE=0.0009;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2451289 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=0.9996;RSQ=0.9645;ERATE=0.0004;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2451298 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8902;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2451319 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7640;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2451481 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.866;LDAF=0.0122;AVGPOST=0.9956;RSQ=0.8641;ERATE=0.0004;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 2451534 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.755;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8193;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2451550 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.721;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.5938;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2451551 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.889;LDAF=0.0047;AVGPOST=0.9981;RSQ=0.8648;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2451608 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2451616 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.936;LDAF=0.0139;AVGPOST=0.9983;RSQ=0.9451;ERATE=0.0004;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2451676 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9741;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2451699 . TC T 48 PASS INDEL;BAVGPOST=0.999;BRSQ=0.568;LDAF=0.0019;AVGPOST=0.9970;RSQ=0.2913;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2451700 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2451724 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2451754 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.705;LDAF=0.0028;AVGPOST=0.9986;RSQ=0.8045;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2451851 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2451865 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9797;ERATE=0.0009;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2451887 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2451916 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6902;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2452041 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0004;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2452053 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2452054 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0069;AVGPOST=0.9996;RSQ=0.9745;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 2452080 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=0.9999;RSQ=0.9921;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2452120 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2452190 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9682;ERATE=0.0010;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2452266 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2452321 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0270;AVGPOST=1.0000;RSQ=0.9991;ERATE=0.0003;THETA=0.0007;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 2452357 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3902;AVGPOST=0.9996;RSQ=0.9994;ERATE=0.0003;THETA=0.0005;AC=853;AN=2184 GT:DS:GL:BD 0.39056778 0
1 2452377 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2452385 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2452418 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2452419 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0065;AVGPOST=0.9977;RSQ=0.8684;ERATE=0.0044;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2452444 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3577;AVGPOST=0.9995;RSQ=0.9992;ERATE=0.0003;THETA=0.0004;AC=782;AN=2184 GT:DS:GL:BD 0.35805860 0
1 2452569 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8437;AVGPOST=0.9998;RSQ=0.9993;ERATE=0.0004;THETA=0.0007;AC=1844;AN=2184 GT:DS:GL:BD 0.84432232 1
1 2452593 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8316;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2452658 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2452699 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2452771 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0010;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 2452798 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2452799 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2452815 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0270;AVGPOST=1.0000;RSQ=0.9991;ERATE=0.0003;THETA=0.0004;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 2452931 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0033;AVGPOST=0.9996;RSQ=0.9476;ERATE=0.0006;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2452979 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0133;AVGPOST=0.9999;RSQ=0.9950;ERATE=0.0003;THETA=0.0002;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2453003 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2453163 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0173;AVGPOST=0.9995;RSQ=0.9899;ERATE=0.0003;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 2453205 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2453232 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2453248 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2453252 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2453263 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2453352 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.8015;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2453361 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2453544 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0061;AVGPOST=0.9997;RSQ=0.9787;ERATE=0.0004;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2453612 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2453640 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8967;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2453653 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0024;AVGPOST=0.9983;RSQ=0.7333;ERATE=0.0006;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2453663 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6475;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2453684 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.770;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7421;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2453710 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.686;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4245;ERATE=0.0006;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2453746 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0007;AVGPOST=0.9989;RSQ=0.3620;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2453758 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.880;LDAF=0.0086;AVGPOST=0.9969;RSQ=0.8581;ERATE=0.0007;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2453812 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3291;AVGPOST=0.9929;RSQ=0.9886;ERATE=0.0005;THETA=0.0004;AC=717;AN=2184 GT:DS:GL:BD 0.32829669 0
1 2453870 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0037;AVGPOST=0.9983;RSQ=0.8113;ERATE=0.0004;THETA=0.0012;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2453906 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2453918 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9734;ERATE=0.0006;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2453924 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5730;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2453932 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6313;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2453975 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.845;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9289;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2454032 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.0076;AVGPOST=0.9979;RSQ=0.8855;ERATE=0.0006;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 2454071 . AAAC A 5764 PASS INDEL;BAVGPOST=0.998;BRSQ=0.975;LDAF=0.0326;AVGPOST=0.9995;RSQ=0.9936;ERATE=0.0004;THETA=0.0004;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 2454133 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.751;LDAF=0.0195;AVGPOST=0.9846;RSQ=0.6904;ERATE=0.0070;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 2454448 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0133;AVGPOST=0.9999;RSQ=0.9950;ERATE=0.0003;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2454551 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2454555 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5981;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2454679 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0034;AVGPOST=0.9982;RSQ=0.7818;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2454683 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0132;AVGPOST=0.9982;RSQ=0.9479;ERATE=0.0004;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 2454709 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.8162;AVGPOST=0.9927;RSQ=0.9812;ERATE=0.0012;THETA=0.0005;AC=1787;AN=2184 GT:DS:GL:BD 0.81822342 1
1 2454780 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8363;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2454830 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5800;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2454865 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0044;AVGPOST=0.9988;RSQ=0.8797;ERATE=0.0005;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2454930 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4006;AVGPOST=0.9975;RSQ=0.9961;ERATE=0.0004;THETA=0.0004;AC=876;AN=2184 GT:DS:GL:BD 0.40109891 0
1 2455086 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0027;AVGPOST=0.9969;RSQ=0.5041;ERATE=0.0006;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2455112 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.714;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4648;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2455146 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.763;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5069;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2455483 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5081;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2455500 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.4224;AVGPOST=0.9954;RSQ=0.9928;ERATE=0.0005;THETA=0.0004;AC=925;AN=2184 GT:DS:GL:BD 0.42353481 0
1 2455603 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5767;ERATE=0.0003;THETA=0.0059;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2455633 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0474;AVGPOST=0.9974;RSQ=0.9807;ERATE=0.0003;THETA=0.0004;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 2455776 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9483;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2455798 . AG A 208 PASS INDEL;BAVGPOST=0.999;BRSQ=0.775;LDAF=0.0017;AVGPOST=0.9987;RSQ=0.7017;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2455862 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0103;AVGPOST=0.9989;RSQ=0.9578;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 2455863 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.979;LDAF=0.0556;AVGPOST=0.9954;RSQ=0.9670;ERATE=0.0005;THETA=0.0003;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 2455961 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2455969 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2455972 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0087;AVGPOST=0.9986;RSQ=0.9339;ERATE=0.0003;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2455981 . T TA 48 PASS INDEL;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5953;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2456059 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.698;LDAF=0.0019;AVGPOST=0.9971;RSQ=0.3790;ERATE=0.0007;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2456167 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.896;LDAF=0.0041;AVGPOST=0.9978;RSQ=0.7891;ERATE=0.0006;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2456203 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8663;AVGPOST=0.9985;RSQ=0.9948;ERATE=0.0004;THETA=0.0004;AC=1894;AN=2184 GT:DS:GL:BD 0.86721611 1
1 2456417 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0054;AVGPOST=0.9988;RSQ=0.9130;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2456547 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9546;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2456799 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6262;ERATE=0.0004;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 2456816 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.918;LDAF=0.0946;AVGPOST=0.9858;RSQ=0.9484;ERATE=0.0004;THETA=0.0005;AC=203;AN=2184 GT:DS:GL:BD 0.09294872 0
1 2456868 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0110;AVGPOST=0.9993;RSQ=0.9705;ERATE=0.0004;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 2456954 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0173;AVGPOST=0.9989;RSQ=0.9715;ERATE=0.0003;THETA=0.0011;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 2457021 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6323;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2457034 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7030;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2457086 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0017;AVGPOST=0.9996;RSQ=0.9195;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2457103 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0051;AVGPOST=0.9995;RSQ=0.9536;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2457309 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.605;LDAF=0.0048;AVGPOST=0.9962;RSQ=0.6642;ERATE=0.0006;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2458010 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0190;AVGPOST=0.9995;RSQ=0.9893;ERATE=0.0003;THETA=0.0004;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 2458049 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7905;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2458475 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5703;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2458522 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0056;AVGPOST=0.9980;RSQ=0.8396;ERATE=0.0005;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2458701 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6426;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2458874 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0084;AVGPOST=0.9990;RSQ=0.9519;ERATE=0.0004;THETA=0.0010;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2458888 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0028;AVGPOST=0.9971;RSQ=0.5342;ERATE=0.0007;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2458931 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5922;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2458967 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.856;LDAF=0.0095;AVGPOST=0.9963;RSQ=0.8425;ERATE=0.0016;THETA=0.0031;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2459039 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0081;AVGPOST=0.9992;RSQ=0.9624;ERATE=0.0004;THETA=0.0011;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2459304 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0077;AVGPOST=0.9991;RSQ=0.9456;ERATE=0.0005;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2459313 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.766;LDAF=0.0043;AVGPOST=0.9978;RSQ=0.8135;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2459462 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.755;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6314;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2459684 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.682;LDAF=0.0256;AVGPOST=0.9818;RSQ=0.7584;ERATE=0.0006;THETA=0.0006;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 2459737 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.748;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2459836 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.724;LDAF=0.0041;AVGPOST=0.9976;RSQ=0.7649;ERATE=0.0006;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2459879 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0090;AVGPOST=0.9966;RSQ=0.8622;ERATE=0.0004;THETA=0.0013;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2459897 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0087;AVGPOST=0.9967;RSQ=0.8561;ERATE=0.0005;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2460014 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.697;LDAF=0.0064;AVGPOST=0.9952;RSQ=0.7047;ERATE=0.0006;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2460164 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.743;LDAF=0.0021;AVGPOST=0.9982;RSQ=0.6212;ERATE=0.0011;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2460175 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=0.9989;RSQ=0.8906;ERATE=0.0005;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2460215 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7934;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2460232 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.648;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5069;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2460248 . CTG C 403 PASS INDEL;BAVGPOST=0.996;BRSQ=0.635;LDAF=0.0059;AVGPOST=0.9944;RSQ=0.6223;ERATE=0.0007;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2460428 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0025;AVGPOST=0.9985;RSQ=0.7506;ERATE=0.0006;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2460465 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0091;AVGPOST=0.9978;RSQ=0.8913;ERATE=0.0005;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2460564 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0136;AVGPOST=0.9967;RSQ=0.8967;ERATE=0.0007;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 2460608 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.906;LDAF=0.0533;AVGPOST=0.9911;RSQ=0.9289;ERATE=0.0007;THETA=0.0020;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 2460896 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.238;LDAF=0.0279;AVGPOST=0.9619;RSQ=0.4524;ERATE=0.0024;THETA=0.0009;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 2461207 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.715;LDAF=0.0234;AVGPOST=0.9886;RSQ=0.8014;ERATE=0.0007;THETA=0.0003;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 2461279 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6087;ERATE=0.0006;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2461373 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.524;LDAF=0.0262;AVGPOST=0.9679;RSQ=0.4987;ERATE=0.0111;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 2461416 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.703;LDAF=0.0024;AVGPOST=0.9962;RSQ=0.3401;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2461427 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6652;ERATE=0.0006;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2461571 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0119;AVGPOST=0.9981;RSQ=0.9332;ERATE=0.0004;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 2462179 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0097;AVGPOST=0.9979;RSQ=0.9129;ERATE=0.0004;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 2462183 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0116;AVGPOST=0.9987;RSQ=0.9565;ERATE=0.0004;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 2462199 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.630;LDAF=0.0051;AVGPOST=0.9957;RSQ=0.6479;ERATE=0.0007;THETA=0.0029;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2462236 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0120;AVGPOST=0.9979;RSQ=0.9251;ERATE=0.0006;THETA=0.0018;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 2462382 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.889;LDAF=0.0483;AVGPOST=0.9909;RSQ=0.9250;ERATE=0.0007;THETA=0.0034;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 2462410 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.424;LDAF=0.0091;AVGPOST=0.9876;RSQ=0.4500;ERATE=0.0016;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2462738 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.724;LDAF=0.0152;AVGPOST=0.9922;RSQ=0.7932;ERATE=0.0006;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 2462818 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.970;LDAF=0.8222;AVGPOST=0.9899;RSQ=0.9737;ERATE=0.0012;THETA=0.0009;AC=1798;AN=2184 GT:DS:GL:BD 0.82326007 1
1 2462835 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.7747;AVGPOST=0.9939;RSQ=0.9867;ERATE=0.0009;THETA=0.0008;AC=1696;AN=2184 GT:DS:GL:BD 0.77655679 1
1 2462896 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0035;AVGPOST=0.9986;RSQ=0.8215;ERATE=0.0006;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2462902 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0140;AVGPOST=0.9968;RSQ=0.9104;ERATE=0.0004;THETA=0.0007;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 2463113 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.5020;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2463163 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0108;AVGPOST=0.9974;RSQ=0.8968;ERATE=0.0005;THETA=0.0040;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 2463201 . CA C 537 PASS INDEL;BAVGPOST=0.994;BRSQ=0.717;LDAF=0.0110;AVGPOST=0.9941;RSQ=0.7889;ERATE=0.0005;THETA=0.0013;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 2463414 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.4100;AVGPOST=0.9950;RSQ=0.9922;ERATE=0.0004;THETA=0.0005;AC=898;AN=2184 GT:DS:GL:BD 0.41117215 0
1 2463420 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.755;LDAF=0.0025;AVGPOST=0.9989;RSQ=0.8592;ERATE=0.0003;THETA=0.0025;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2463566 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0018;AVGPOST=0.9974;RSQ=0.3998;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2463583 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0033;AVGPOST=0.9988;RSQ=0.8642;ERATE=0.0011;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2463735 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.638;LDAF=0.0030;AVGPOST=0.9966;RSQ=0.5289;ERATE=0.0007;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2463749 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.4096;AVGPOST=0.9951;RSQ=0.9922;ERATE=0.0006;THETA=0.0005;AC=898;AN=2184 GT:DS:GL:BD 0.41117215 0
1 2463873 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.607;LDAF=0.0040;AVGPOST=0.9929;RSQ=0.2823;ERATE=0.0009;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2463948 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.606;LDAF=0.0048;AVGPOST=0.9966;RSQ=0.7145;ERATE=0.0008;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2463995 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.685;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4468;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2464045 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.986;LDAF=0.7696;AVGPOST=0.9822;RSQ=0.9632;ERATE=0.0017;THETA=0.0002;AC=1690;AN=2184 GT:DS:GL:BD 0.77380955 1
1 2464193 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.466;LDAF=0.0050;AVGPOST=0.9930;RSQ=0.4361;ERATE=0.0009;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2464357 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.7142;ERATE=0.0005;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2464385 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0063;AVGPOST=0.9973;RSQ=0.8294;ERATE=0.0004;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2464422 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.693;LDAF=0.0028;AVGPOST=0.9978;RSQ=0.6846;ERATE=0.0005;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2464430 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.627;LDAF=0.0016;AVGPOST=0.9983;RSQ=0.5980;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2464477 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0038;AVGPOST=0.9952;RSQ=0.5681;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2464492 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0027;AVGPOST=0.9980;RSQ=0.6799;ERATE=0.0005;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2464567 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.7659;AVGPOST=0.9947;RSQ=0.9889;ERATE=0.0009;THETA=0.0005;AC=1677;AN=2184 GT:DS:GL:BD 0.76785713 1
1 2464637 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.705;LDAF=0.0065;AVGPOST=0.9971;RSQ=0.8090;ERATE=0.0009;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2464732 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8313;ERATE=0.0004;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2464752 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0126;AVGPOST=0.9988;RSQ=0.9634;ERATE=0.0003;THETA=0.0006;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 2464906 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.952;LDAF=0.0159;AVGPOST=0.9990;RSQ=0.9705;ERATE=0.0003;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 2465007 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5098;ERATE=0.0004;THETA=0.0054;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2465069 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.930;LDAF=0.0142;AVGPOST=0.9952;RSQ=0.8577;ERATE=0.0007;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 2465081 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.753;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4281;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2465095 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.974;LDAF=0.4105;AVGPOST=0.9763;RSQ=0.9657;ERATE=0.0026;THETA=0.0004;AC=901;AN=2184 GT:DS:GL:BD 0.41254580 0
1 2465144 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.7710;AVGPOST=0.9957;RSQ=0.9903;ERATE=0.0006;THETA=0.0005;AC=1689;AN=2184 GT:DS:GL:BD 0.77335167 1
1 2465168 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.724;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4398;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2465171 . TCAAACGGCG T 758 PASS INDEL;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0062;AVGPOST=0.9979;RSQ=0.8633;ERATE=0.0004;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2465292 . TG T 840 PASS INDEL;BAVGPOST=0.995;BRSQ=0.798;LDAF=0.0103;AVGPOST=0.9947;RSQ=0.7933;ERATE=0.0006;THETA=0.0009;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2465329 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.987;LDAF=0.4162;AVGPOST=0.9877;RSQ=0.9821;ERATE=0.0014;THETA=0.0009;AC=912;AN=2184 GT:DS:GL:BD 0.41758242 0
1 2465335 . CA C 1769 PASS INDEL;BAVGPOST=0.997;BRSQ=0.956;LDAF=0.0182;AVGPOST=0.9972;RSQ=0.9354;ERATE=0.0005;THETA=0.0006;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 2465355 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.962;LDAF=0.3369;AVGPOST=0.9862;RSQ=0.9764;ERATE=0.0008;THETA=0.0010;AC=733;AN=2184 GT:DS:GL:BD 0.33562270 0
1 2465402 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0016;AVGPOST=0.9988;RSQ=0.7116;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2465405 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.584;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.4191;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2465663 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2465671 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.8176;AVGPOST=0.9967;RSQ=0.9920;ERATE=0.0004;THETA=0.0012;AC=1786;AN=2184 GT:DS:GL:BD 0.81776559 1
1 2465718 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.6464;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2465792 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.975;LDAF=0.8218;AVGPOST=0.9847;RSQ=0.9630;ERATE=0.0026;THETA=0.0007;AC=1804;AN=2184 GT:DS:GL:BD 0.82600731 1
1 2465823 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.744;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5782;ERATE=0.0004;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2465855 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0040;AVGPOST=0.9968;RSQ=0.6614;ERATE=0.0004;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2465912 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.979;LDAF=0.7770;AVGPOST=0.9867;RSQ=0.9729;ERATE=0.0016;THETA=0.0236;AC=1706;AN=2184 GT:DS:GL:BD 0.78113556 1
1 2465950 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.413;LDAF=0.9938;AVGPOST=0.9924;RSQ=0.5391;ERATE=0.0010;THETA=0.0103;AC=2170;AN=2184 GT:DS:GL:BD 0.99358976 1
1 2465974 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.763;LDAF=0.0164;AVGPOST=0.9908;RSQ=0.7814;ERATE=0.0007;THETA=0.0037;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 2466294 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.895;LDAF=0.0178;AVGPOST=0.9970;RSQ=0.9300;ERATE=0.0008;THETA=0.0057;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 2466346 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0153;AVGPOST=0.9975;RSQ=0.9250;ERATE=0.0006;THETA=0.0049;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 2466377 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.960;LDAF=0.0307;AVGPOST=0.9969;RSQ=0.9556;ERATE=0.0007;THETA=0.0020;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 2466425 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.914;BRSQ=0.850;LDAF=0.5449;AVGPOST=0.8762;RSQ=0.8113;ERATE=0.0383;THETA=0.0055;AC=1197;AN=2184 GT:DS:GL:BD 0.54807693 1
1 2466453 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.895;LDAF=0.0144;AVGPOST=0.9976;RSQ=0.9379;ERATE=0.0004;THETA=0.0033;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 2466460 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.879;LDAF=0.0030;AVGPOST=0.9993;RSQ=0.9012;ERATE=0.0003;THETA=0.0108;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2466496 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.715;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6963;ERATE=0.0004;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2466592 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7185;ERATE=0.0010;THETA=0.0051;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2466632 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.515;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6236;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2466633 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.933;LDAF=0.8377;AVGPOST=0.9743;RSQ=0.9343;ERATE=0.0062;THETA=0.0142;AC=1836;AN=2184 GT:DS:GL:BD 0.84065932 1
1 2466652 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.969;LDAF=0.0163;AVGPOST=0.9980;RSQ=0.9532;ERATE=0.0004;THETA=0.0039;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 2466734 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.890;LDAF=0.0051;AVGPOST=0.9987;RSQ=0.8794;ERATE=0.0008;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2466826 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.681;LDAF=0.0015;AVGPOST=0.9981;RSQ=0.5816;ERATE=0.0004;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2466949 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.733;LDAF=0.0025;AVGPOST=0.9962;RSQ=0.3532;ERATE=0.0006;THETA=0.0082;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2467041 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.724;LDAF=0.0019;AVGPOST=0.9971;RSQ=0.2865;ERATE=0.0007;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2467107 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.595;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.3966;ERATE=0.0007;THETA=0.0044;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2467127 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.755;LDAF=0.0190;AVGPOST=0.9923;RSQ=0.8317;ERATE=0.0006;THETA=0.0082;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 2467303 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8120;ERATE=0.0005;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2467543 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.795;LDAF=0.0024;AVGPOST=0.9980;RSQ=0.6240;ERATE=0.0005;THETA=0.0171;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2467566 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5543;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2467626 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.725;LDAF=0.0043;AVGPOST=0.9984;RSQ=0.8534;ERATE=0.0006;THETA=0.0064;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2467670 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.962;LDAF=0.0753;AVGPOST=0.9950;RSQ=0.9726;ERATE=0.0004;THETA=0.0015;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 2467723 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0185;AVGPOST=0.9994;RSQ=0.9844;ERATE=0.0003;THETA=0.0006;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 2467764 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0102;AVGPOST=0.9995;RSQ=0.9789;ERATE=0.0004;THETA=0.0102;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 2467845 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0096;AVGPOST=0.9991;RSQ=0.9629;ERATE=0.0003;THETA=0.0010;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 2468080 . G GT 13 PASS INDEL;BAVGPOST=0.998;BRSQ=0.547;LDAF=0.0027;AVGPOST=0.9973;RSQ=0.6000;ERATE=0.0005;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2468085 . TTTTG T 167 PASS INDEL;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0025;AVGPOST=0.9980;RSQ=0.6613;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2468177 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0586;AVGPOST=0.9992;RSQ=0.9938;ERATE=0.0003;THETA=0.0013;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 2468297 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6351;ERATE=0.0008;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2468425 . TGC T 1484 PASS INDEL;BAVGPOST=0.961;BRSQ=0.654;LDAF=0.0660;AVGPOST=0.9586;RSQ=0.7553;ERATE=0.0011;THETA=0.0007;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 2468427 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.868;LDAF=0.0374;AVGPOST=0.9852;RSQ=0.8551;ERATE=0.0025;THETA=0.0009;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 2468486 . GTGCC G 443 PASS INDEL;BAVGPOST=0.999;BRSQ=0.746;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6443;ERATE=0.0007;THETA=0.0037;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2468503 . AGT A 572 PASS INDEL;BAVGPOST=0.988;BRSQ=0.720;LDAF=0.0310;AVGPOST=0.9710;RSQ=0.5991;ERATE=0.0146;THETA=0.0034;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 2468666 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.784;LDAF=0.0032;AVGPOST=0.9979;RSQ=0.7611;ERATE=0.0006;THETA=0.0018;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2468726 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.887;LDAF=0.0118;AVGPOST=0.9964;RSQ=0.8839;ERATE=0.0004;THETA=0.0008;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 2468744 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.311;LDAF=0.0033;AVGPOST=0.9944;RSQ=0.3277;ERATE=0.0012;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2468752 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7568;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2468760 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.459;LDAF=0.0023;AVGPOST=0.9974;RSQ=0.5369;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2468786 . CT C 6589 PASS INDEL;BAVGPOST=0.997;BRSQ=0.982;LDAF=0.0587;AVGPOST=0.9983;RSQ=0.9870;ERATE=0.0005;THETA=0.0017;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 2468856 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5068;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2468857 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.956;LDAF=0.0292;AVGPOST=0.9983;RSQ=0.9759;ERATE=0.0004;THETA=0.0012;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 2468906 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8722;ERATE=0.0005;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2468977 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.363;LDAF=0.0199;AVGPOST=0.9707;RSQ=0.4232;ERATE=0.0057;THETA=0.0008;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2468998 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0040;AVGPOST=0.9974;RSQ=0.7272;ERATE=0.0005;THETA=0.0014;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2469097 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0574;AVGPOST=0.9977;RSQ=0.9873;ERATE=0.0004;THETA=0.0040;AC=126;AN=2184 GT:DS:GL:BD 0.05769231 0
1 2469135 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0042;AVGPOST=0.9988;RSQ=0.8743;ERATE=0.0003;THETA=0.0021;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2469156 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0042;AVGPOST=0.9989;RSQ=0.8798;ERATE=0.0004;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2469207 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0585;AVGPOST=0.9991;RSQ=0.9931;ERATE=0.0004;THETA=0.0016;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 2469243 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.975;LDAF=0.0596;AVGPOST=0.9961;RSQ=0.9731;ERATE=0.0007;THETA=0.0017;AC=129;AN=2184 GT:DS:GL:BD 0.05906593 0
1 2469482 . AGG A 496 PASS INDEL;BAVGPOST=0.997;BRSQ=0.849;LDAF=0.0071;AVGPOST=0.9968;RSQ=0.8266;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2469483 . GGGTGGGC G 1477 PASS INDEL;BAVGPOST=0.997;BRSQ=0.847;LDAF=0.0066;AVGPOST=0.9978;RSQ=0.8631;ERATE=0.0004;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2469512 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0589;AVGPOST=0.9984;RSQ=0.9902;ERATE=0.0004;THETA=0.0006;AC=129;AN=2184 GT:DS:GL:BD 0.05906593 0
1 2469594 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.947;LDAF=0.0141;AVGPOST=0.9960;RSQ=0.8827;ERATE=0.0007;THETA=0.0013;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2469631 . T TC 20 PASS INDEL;BAVGPOST=0.998;BRSQ=0.765;LDAF=0.0027;AVGPOST=0.9968;RSQ=0.5263;ERATE=0.0004;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2469692 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0582;AVGPOST=0.9991;RSQ=0.9931;ERATE=0.0003;THETA=0.0006;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 2469836 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.915;LDAF=0.0272;AVGPOST=0.9890;RSQ=0.8526;ERATE=0.0008;THETA=0.0013;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 2469958 . G GT 561 PASS INDEL;BAVGPOST=0.987;BRSQ=0.689;LDAF=0.0240;AVGPOST=0.9824;RSQ=0.7058;ERATE=0.0052;THETA=0.0008;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 2469981 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6043;ERATE=0.0004;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2470026 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.930;LDAF=0.0514;AVGPOST=0.9930;RSQ=0.9472;ERATE=0.0010;THETA=0.0011;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 2470049 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.829;LDAF=0.0331;AVGPOST=0.9837;RSQ=0.8166;ERATE=0.0029;THETA=0.0028;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 2470291 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0087;AVGPOST=0.9981;RSQ=0.9187;ERATE=0.0004;THETA=0.0009;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2470304 . C CTTA 1557 PASS INDEL;BAVGPOST=0.993;BRSQ=0.745;LDAF=0.0097;AVGPOST=0.9957;RSQ=0.8202;ERATE=0.0007;THETA=0.0014;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2470368 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0592;AVGPOST=0.9978;RSQ=0.9867;ERATE=0.0003;THETA=0.0029;AC=129;AN=2184 GT:DS:GL:BD 0.05906593 0
1 2470376 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.915;LDAF=0.0210;AVGPOST=0.9924;RSQ=0.8593;ERATE=0.0005;THETA=0.0011;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 2470418 . CCT C 109 PASS INDEL;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5597;ERATE=0.0004;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2470444 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5993;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2470673 . ATTTCAGTG A 8441 PASS INDEL;BAVGPOST=0.820;BRSQ=0.487;LDAF=0.2179;AVGPOST=0.8122;RSQ=0.5618;ERATE=0.0428;THETA=0.0009;AC=338;AN=2184 GT:DS:GL:BD 0.15476191 0
1 2470681 . G GGCA 35405 PASS INDEL;BAVGPOST=0.950;BRSQ=0.918;LDAF=0.4725;AVGPOST=0.9197;RSQ=0.8817;ERATE=0.0111;THETA=0.0023;AC=1058;AN=2184 GT:DS:GL:BD 0.48443222 0
1 2470800 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.930;LDAF=0.0119;AVGPOST=0.9971;RSQ=0.8920;ERATE=0.0003;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 2470845 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0587;AVGPOST=0.9991;RSQ=0.9933;ERATE=0.0005;THETA=0.0003;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 2470848 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.985;LDAF=0.5045;AVGPOST=0.9821;RSQ=0.9730;ERATE=0.0010;THETA=0.0007;AC=1104;AN=2184 GT:DS:GL:BD 0.50549453 1
1 2470877 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0588;AVGPOST=0.9989;RSQ=0.9913;ERATE=0.0004;THETA=0.0007;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 2470903 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0080;AVGPOST=0.9993;RSQ=0.9562;ERATE=0.0004;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2470909 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.745;LDAF=0.0039;AVGPOST=0.9951;RSQ=0.4833;ERATE=0.0011;THETA=0.0023;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2471251 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8810;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2471321 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.668;LDAF=0.0024;AVGPOST=0.9984;RSQ=0.7086;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2471504 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.741;LDAF=0.0046;AVGPOST=0.9973;RSQ=0.7562;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2471663 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6249;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2471745 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0582;AVGPOST=0.9978;RSQ=0.9854;ERATE=0.0004;THETA=0.0011;AC=126;AN=2184 GT:DS:GL:BD 0.05769231 0
1 2471755 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.841;LDAF=0.0116;AVGPOST=0.9963;RSQ=0.8734;ERATE=0.0004;THETA=0.0008;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 2471775 . C CA 24 PASS INDEL;BAVGPOST=0.999;BRSQ=0.608;LDAF=0.0030;AVGPOST=0.9953;RSQ=0.3689;ERATE=0.0007;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2471778 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.570;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.3577;ERATE=0.0007;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2471955 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.971;LDAF=0.0592;AVGPOST=0.9948;RSQ=0.9626;ERATE=0.0012;THETA=0.0052;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 2472041 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.700;LDAF=0.0035;AVGPOST=0.9959;RSQ=0.5521;ERATE=0.0006;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2472081 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.986;LDAF=0.5725;AVGPOST=0.9833;RSQ=0.9741;ERATE=0.0007;THETA=0.0017;AC=1259;AN=2184 GT:DS:GL:BD 0.57646519 1
1 2472090 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.972;LDAF=0.0592;AVGPOST=0.9928;RSQ=0.9513;ERATE=0.0008;THETA=0.0002;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 2472144 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.957;LDAF=0.5031;AVGPOST=0.9756;RSQ=0.9631;ERATE=0.0009;THETA=0.0010;AC=1106;AN=2184 GT:DS:GL:BD 0.50641024 1
1 2472370 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.532;LDAF=0.0282;AVGPOST=0.9771;RSQ=0.6975;ERATE=0.0012;THETA=0.0005;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 2472946 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.939;LDAF=0.0586;AVGPOST=0.9963;RSQ=0.9745;ERATE=0.0005;THETA=0.0008;AC=126;AN=2184 GT:DS:GL:BD 0.05769231 0
1 2473030 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.774;LDAF=0.0031;AVGPOST=0.9967;RSQ=0.6039;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2473113 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5000;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2473191 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.895;LDAF=0.0117;AVGPOST=0.9973;RSQ=0.9045;ERATE=0.0005;THETA=0.0011;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 2473225 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.779;LDAF=0.0024;AVGPOST=0.9969;RSQ=0.4981;ERATE=0.0008;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2473258 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0582;AVGPOST=0.9989;RSQ=0.9928;ERATE=0.0004;THETA=0.0004;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 2473276 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.586;LDAF=0.0021;AVGPOST=0.9988;RSQ=0.7304;ERATE=0.0004;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2473642 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.830;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9167;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2473644 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5392;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2473666 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8494;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2473713 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7147;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2473803 . CT C 362 PASS INDEL;BAVGPOST=0.999;BRSQ=0.909;LDAF=0.0079;AVGPOST=0.9960;RSQ=0.8049;ERATE=0.0007;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 2473805 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5650;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2473875 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.828;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7186;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2473986 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7278;ERATE=0.0004;THETA=0.0047;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2473992 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.783;LDAF=0.0087;AVGPOST=0.9943;RSQ=0.7624;ERATE=0.0008;THETA=0.0008;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2474171 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4891;ERATE=0.0005;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2474205 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.988;LDAF=0.5831;AVGPOST=0.9893;RSQ=0.9838;ERATE=0.0006;THETA=0.0008;AC=1277;AN=2184 GT:DS:GL:BD 0.58470696 1
1 2474225 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0071;AVGPOST=0.9965;RSQ=0.8066;ERATE=0.0005;THETA=0.0009;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2474229 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.815;LDAF=0.0053;AVGPOST=0.9981;RSQ=0.8693;ERATE=0.0004;THETA=0.0012;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2474293 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0582;AVGPOST=0.9982;RSQ=0.9899;ERATE=0.0004;THETA=0.0010;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 2474313 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0117;AVGPOST=0.9975;RSQ=0.9057;ERATE=0.0003;THETA=0.0010;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 2474476 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.955;LDAF=0.0355;AVGPOST=0.9938;RSQ=0.9377;ERATE=0.0004;THETA=0.0005;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 2474540 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.7772;ERATE=0.0006;THETA=0.0024;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2474681 rs59506374 C CTG 3148 PASS INDEL;BAVGPOST=0.985;BRSQ=0.850;LDAF=0.0520;AVGPOST=0.9934;RSQ=0.9558;ERATE=0.0005;THETA=0.0005;AC=114;AN=2184 GT:DS:GL:BD 0.05219780 0
1 2474683 rs60257328 C CGGTA 4977 PASS INDEL;BAVGPOST=0.983;BRSQ=0.819;LDAF=0.0522;AVGPOST=0.9911;RSQ=0.9364;ERATE=0.0013;THETA=0.0004;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 2474685 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.843;LDAF=0.0551;AVGPOST=0.9883;RSQ=0.9138;ERATE=0.0012;THETA=0.0006;AC=122;AN=2184 GT:DS:GL:BD 0.05586081 0
1 2474770 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.805;LDAF=0.0030;AVGPOST=0.9984;RSQ=0.7759;ERATE=0.0004;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2475074 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.586;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.4368;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2475113 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.960;BRSQ=0.587;LDAF=0.0450;AVGPOST=0.9745;RSQ=0.7553;ERATE=0.0017;THETA=0.0009;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 2475212 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.988;LDAF=0.5092;AVGPOST=0.9815;RSQ=0.9718;ERATE=0.0012;THETA=0.0010;AC=1117;AN=2184 GT:DS:GL:BD 0.51144689 1
1 2475378 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0095;AVGPOST=0.9979;RSQ=0.9074;ERATE=0.0005;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 2475437 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0050;AVGPOST=0.9963;RSQ=0.6855;ERATE=0.0009;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2475439 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0027;AVGPOST=0.9974;RSQ=0.6464;ERATE=0.0009;THETA=0.0030;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2475444 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0287;AVGPOST=0.9989;RSQ=0.9833;ERATE=0.0004;THETA=0.0007;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 2475465 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.775;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5407;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2475474 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.958;LDAF=0.1115;AVGPOST=0.9840;RSQ=0.9434;ERATE=0.0006;THETA=0.0006;AC=237;AN=2184 GT:DS:GL:BD 0.10851648 0
1 2475628 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.5588;ERATE=0.0003;THETA=0.0050;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2475739 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.742;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.4997;ERATE=0.0007;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2475760 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0015;AVGPOST=0.9981;RSQ=0.5182;ERATE=0.0005;THETA=0.0026;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2475833 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.766;LDAF=0.0125;AVGPOST=0.9966;RSQ=0.9071;ERATE=0.0006;THETA=0.0009;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 2475926 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.844;LDAF=0.0094;AVGPOST=0.9985;RSQ=0.9315;ERATE=0.0004;THETA=0.0010;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 2476052 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.558;LDAF=0.0028;AVGPOST=0.9982;RSQ=0.7134;ERATE=0.0005;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2476053 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.537;LDAF=0.0019;AVGPOST=0.9970;RSQ=0.4195;ERATE=0.0007;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2476234 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.979;LDAF=0.0287;AVGPOST=0.9989;RSQ=0.9826;ERATE=0.0003;THETA=0.0017;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 2476484 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.673;LDAF=0.0040;AVGPOST=0.9967;RSQ=0.6443;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2476499 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0144;AVGPOST=0.9905;RSQ=0.7795;ERATE=0.0005;THETA=0.0016;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 2476784 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.913;LDAF=0.0270;AVGPOST=0.9914;RSQ=0.8819;ERATE=0.0011;THETA=0.0002;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 2476849 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.757;LDAF=0.0043;AVGPOST=0.9965;RSQ=0.6888;ERATE=0.0005;THETA=0.0039;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2476879 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.816;LDAF=0.0096;AVGPOST=0.9960;RSQ=0.8545;ERATE=0.0004;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 2477105 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7802;ERATE=0.0004;THETA=0.0041;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2477150 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0080;AVGPOST=0.9994;RSQ=0.9620;ERATE=0.0004;THETA=0.0009;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2477157 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7213;ERATE=0.0004;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2477199 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5552;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2477358 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.962;LDAF=0.5361;AVGPOST=0.9606;RSQ=0.9405;ERATE=0.0038;THETA=0.0039;AC=1168;AN=2184 GT:DS:GL:BD 0.53479856 1
1 2477483 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.451;LDAF=0.0034;AVGPOST=0.9955;RSQ=0.3901;ERATE=0.0007;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2477625 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.375;LDAF=0.0139;AVGPOST=0.9862;RSQ=0.5976;ERATE=0.0008;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 2477690 . GA G 86 PASS INDEL;BAVGPOST=0.413;BRSQ=0.011;LDAF=0.1840;AVGPOST=0.7671;RSQ=0.3877;ERATE=0.0066;THETA=0.0005;AC=267;AN=2184 GT:DS:GL:BD 0.12225275 0
1 2477697 . GT G 50 PASS INDEL;BAVGPOST=0.533;BRSQ=0.009;LDAF=0.1813;AVGPOST=0.7440;RSQ=0.2985;ERATE=0.0169;THETA=0.0014;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 2477831 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.519;LDAF=0.0268;AVGPOST=0.9875;RSQ=0.7974;ERATE=0.0014;THETA=0.0010;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 2477839 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.317;LDAF=0.0466;AVGPOST=0.9377;RSQ=0.4399;ERATE=0.0052;THETA=0.0007;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 2477864 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.297;LDAF=0.0347;AVGPOST=0.9604;RSQ=0.5590;ERATE=0.0017;THETA=0.0008;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 2478023 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.974;LDAF=0.0347;AVGPOST=0.9951;RSQ=0.9492;ERATE=0.0005;THETA=0.0007;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 2478186 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.473;LDAF=0.0054;AVGPOST=0.9924;RSQ=0.4582;ERATE=0.0010;THETA=0.0039;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2478511 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.5678;AVGPOST=0.9850;RSQ=0.9765;ERATE=0.0007;THETA=0.0005;AC=1243;AN=2184 GT:DS:GL:BD 0.56913918 1
1 2478637 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.933;LDAF=0.0153;AVGPOST=0.9920;RSQ=0.7782;ERATE=0.0010;THETA=0.0019;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2478653 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.707;LDAF=0.0048;AVGPOST=0.9943;RSQ=0.5403;ERATE=0.0007;THETA=0.0011;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2478823 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0113;AVGPOST=0.9991;RSQ=0.9650;ERATE=0.0004;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 2478836 . CTG C 123 PASS INDEL;BAVGPOST=0.999;BRSQ=0.709;LDAF=0.0068;AVGPOST=0.9889;RSQ=0.3663;ERATE=0.0012;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2478982 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.701;LDAF=0.0025;AVGPOST=0.9960;RSQ=0.3775;ERATE=0.0007;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2479241 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.804;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.7323;ERATE=0.0004;THETA=0.0018;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2479340 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.643;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7654;ERATE=0.0005;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2479351 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.766;LDAF=0.0010;AVGPOST=0.9987;RSQ=0.4443;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2479451 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.735;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.5849;ERATE=0.0004;THETA=0.0023;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2479474 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0361;AVGPOST=0.9969;RSQ=0.9608;ERATE=0.0011;THETA=0.0008;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 2479646 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.793;LDAF=0.0142;AVGPOST=0.9947;RSQ=0.8449;ERATE=0.0004;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 2479666 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.607;LDAF=0.0008;AVGPOST=0.9988;RSQ=0.3490;ERATE=0.0005;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2479682 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.695;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4979;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2479738 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0034;AVGPOST=0.9978;RSQ=0.7589;ERATE=0.0005;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2479808 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0040;AVGPOST=0.9968;RSQ=0.7069;ERATE=0.0005;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2479850 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.717;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4744;ERATE=0.0005;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2479938 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0111;AVGPOST=0.9961;RSQ=0.8640;ERATE=0.0004;THETA=0.0009;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 2479983 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.5588;AVGPOST=0.9792;RSQ=0.9671;ERATE=0.0018;THETA=0.0005;AC=1224;AN=2184 GT:DS:GL:BD 0.56043959 1
1 2480001 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5655;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2480169 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0071;AVGPOST=0.9938;RSQ=0.6823;ERATE=0.0010;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2480210 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.818;LDAF=0.0065;AVGPOST=0.9980;RSQ=0.8749;ERATE=0.0004;THETA=0.0017;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2480222 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.676;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.4367;ERATE=0.0005;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2480337 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.926;LDAF=0.0300;AVGPOST=0.9943;RSQ=0.9305;ERATE=0.0004;THETA=0.0013;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 2480340 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4467;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2480423 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0097;AVGPOST=0.9989;RSQ=0.9483;ERATE=0.0004;THETA=0.0012;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2480486 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.430;LDAF=0.0099;AVGPOST=0.9846;RSQ=0.4026;ERATE=0.0031;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2480760 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5277;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2480790 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.793;LDAF=0.0046;AVGPOST=0.9970;RSQ=0.7139;ERATE=0.0007;THETA=0.0011;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2480827 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0040;AVGPOST=0.9979;RSQ=0.7701;ERATE=0.0005;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2480931 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.759;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6340;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2481014 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0025;AVGPOST=0.9977;RSQ=0.6446;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2481110 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0154;AVGPOST=0.9931;RSQ=0.8205;ERATE=0.0007;THETA=0.0026;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 2481254 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.767;LDAF=0.0042;AVGPOST=0.9978;RSQ=0.7671;ERATE=0.0004;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2481258 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0106;AVGPOST=0.9982;RSQ=0.9331;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 2481285 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0045;AVGPOST=0.9983;RSQ=0.8519;ERATE=0.0006;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2481312 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.719;LDAF=0.0055;AVGPOST=0.9962;RSQ=0.7219;ERATE=0.0004;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2481324 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.669;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4876;ERATE=0.0007;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2481464 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0127;AVGPOST=0.9971;RSQ=0.9094;ERATE=0.0004;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 2481497 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.780;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4512;ERATE=0.0006;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2481643 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.302;LDAF=0.0030;AVGPOST=0.9957;RSQ=0.4181;ERATE=0.0009;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2481649 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.748;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5281;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2481702 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0149;AVGPOST=0.9987;RSQ=0.9671;ERATE=0.0004;THETA=0.0007;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 2481757 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.911;LDAF=0.0125;AVGPOST=0.9946;RSQ=0.8150;ERATE=0.0009;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 2481909 . AG A 114 PASS INDEL;BAVGPOST=0.996;BRSQ=0.632;LDAF=0.0128;AVGPOST=0.9823;RSQ=0.4481;ERATE=0.0043;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2482042 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.613;LDAF=0.0024;AVGPOST=0.9978;RSQ=0.6821;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2482090 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0034;AVGPOST=0.9987;RSQ=0.8294;ERATE=0.0005;THETA=0.0022;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2482156 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.679;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5441;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2482237 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.587;LDAF=0.0033;AVGPOST=0.9969;RSQ=0.5842;ERATE=0.0008;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2482353 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.710;LDAF=0.0069;AVGPOST=0.9960;RSQ=0.7668;ERATE=0.0005;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2482381 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0212;AVGPOST=0.9996;RSQ=0.9909;ERATE=0.0003;THETA=0.0009;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 2482492 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0100;AVGPOST=0.9988;RSQ=0.9466;ERATE=0.0004;THETA=0.0008;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 2482499 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7163;ERATE=0.0004;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2482539 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0004;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2482541 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.616;LDAF=0.0165;AVGPOST=0.9818;RSQ=0.5655;ERATE=0.0059;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 2482553 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4802;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2482621 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.900;LDAF=0.0094;AVGPOST=0.9986;RSQ=0.9379;ERATE=0.0004;THETA=0.0012;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2482651 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.642;LDAF=0.0131;AVGPOST=0.9850;RSQ=0.5613;ERATE=0.0059;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2482691 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0093;AVGPOST=0.9997;RSQ=0.9857;ERATE=0.0003;THETA=0.0007;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2482699 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.591;LDAF=0.0145;AVGPOST=0.9860;RSQ=0.6361;ERATE=0.0039;THETA=0.0007;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 2482763 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6584;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2482834 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0073;AVGPOST=0.9986;RSQ=0.9301;ERATE=0.0003;THETA=0.0012;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 2482842 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0071;AVGPOST=0.9979;RSQ=0.8925;ERATE=0.0004;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2482848 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.936;LDAF=0.0068;AVGPOST=0.9986;RSQ=0.9239;ERATE=0.0003;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2482876 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6186;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2482908 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8072;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2482921 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5921;AVGPOST=0.9962;RSQ=0.9938;ERATE=0.0004;THETA=0.0005;AC=1295;AN=2184 GT:DS:GL:BD 0.59294873 1
1 2482932 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0103;AVGPOST=0.9991;RSQ=0.9644;ERATE=0.0003;THETA=0.0008;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 2483012 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.854;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8722;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2483031 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0094;AVGPOST=0.9994;RSQ=0.9682;ERATE=0.0004;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2483079 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.934;LDAF=0.0258;AVGPOST=0.9951;RSQ=0.9151;ERATE=0.0006;THETA=0.0002;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 2483141 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0112;AVGPOST=0.9952;RSQ=0.8344;ERATE=0.0006;THETA=0.0008;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2483256 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.748;LDAF=0.0044;AVGPOST=0.9951;RSQ=0.5553;ERATE=0.0007;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2483270 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5469;AVGPOST=0.9930;RSQ=0.9889;ERATE=0.0011;THETA=0.0010;AC=1198;AN=2184 GT:DS:GL:BD 0.54853481 1
1 2483298 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.5600;AVGPOST=0.9953;RSQ=0.9927;ERATE=0.0004;THETA=0.0004;AC=1224;AN=2184 GT:DS:GL:BD 0.56043959 1
1 2483328 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.704;LDAF=0.0100;AVGPOST=0.9902;RSQ=0.6162;ERATE=0.0033;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2483389 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5640;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2483568 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.663;LDAF=0.0114;AVGPOST=0.9914;RSQ=0.7360;ERATE=0.0005;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 2483569 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0096;AVGPOST=0.9953;RSQ=0.8076;ERATE=0.0009;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2483620 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0101;AVGPOST=0.9975;RSQ=0.8950;ERATE=0.0006;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2483628 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.663;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6729;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2483750 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0095;AVGPOST=0.9991;RSQ=0.9637;ERATE=0.0004;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2483840 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.925;LDAF=0.0272;AVGPOST=0.9963;RSQ=0.9477;ERATE=0.0004;THETA=0.0045;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 2483868 . CG C 11 PASS INDEL;BAVGPOST=0.999;BRSQ=0.594;LDAF=0.0051;AVGPOST=0.9939;RSQ=0.4828;ERATE=0.0007;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2483879 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0096;AVGPOST=0.9990;RSQ=0.9580;ERATE=0.0004;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2483933 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.630;LDAF=0.0024;AVGPOST=0.9977;RSQ=0.6098;ERATE=0.0006;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2483961 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.947;LDAF=0.4022;AVGPOST=0.9572;RSQ=0.9335;ERATE=0.0051;THETA=0.0003;AC=891;AN=2184 GT:DS:GL:BD 0.40796703 0
1 2484005 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.575;LDAF=0.0054;AVGPOST=0.9918;RSQ=0.4143;ERATE=0.0008;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2484112 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0104;AVGPOST=0.9973;RSQ=0.8820;ERATE=0.0004;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2484449 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.708;BRSQ=0.426;LDAF=0.2588;AVGPOST=0.7490;RSQ=0.5066;ERATE=0.0404;THETA=0.0003;AC=432;AN=2184 GT:DS:GL:BD 0.19780220 0
1 2484521 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.526;LDAF=0.0265;AVGPOST=0.9666;RSQ=0.4978;ERATE=0.0066;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 2484537 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.519;LDAF=0.0025;AVGPOST=0.9963;RSQ=0.4198;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2484665 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0144;AVGPOST=0.9957;RSQ=0.8914;ERATE=0.0004;THETA=0.0007;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 2484673 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.604;LDAF=0.0149;AVGPOST=0.9880;RSQ=0.6620;ERATE=0.0011;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 2484748 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.982;LDAF=0.5539;AVGPOST=0.9603;RSQ=0.9404;ERATE=0.0033;THETA=0.0008;AC=1221;AN=2184 GT:DS:GL:BD 0.55906594 1
1 2485241 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0100;AVGPOST=0.9979;RSQ=0.9083;ERATE=0.0004;THETA=0.0010;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2485326 . TCCC T 81 PASS INDEL;BAVGPOST=0.998;BRSQ=0.684;LDAF=0.0047;AVGPOST=0.9950;RSQ=0.5623;ERATE=0.0013;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2485357 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.535;LDAF=0.0069;AVGPOST=0.9934;RSQ=0.6397;ERATE=0.0004;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2485735 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0127;AVGPOST=0.9991;RSQ=0.9744;ERATE=0.0003;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 2485821 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0211;AVGPOST=0.9970;RSQ=0.9462;ERATE=0.0006;THETA=0.0005;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 2486102 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.5506;ERATE=0.0005;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2486110 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.841;LDAF=0.0633;AVGPOST=0.9800;RSQ=0.8872;ERATE=0.0007;THETA=0.0009;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 2486113 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0019;AVGPOST=0.9993;RSQ=0.8327;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2486489 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.667;LDAF=0.0018;AVGPOST=0.9976;RSQ=0.4468;ERATE=0.0005;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2486868 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.959;BRSQ=0.908;LDAF=0.2295;AVGPOST=0.9647;RSQ=0.9284;ERATE=0.0014;THETA=0.0005;AC=501;AN=2184 GT:DS:GL:BD 0.22939560 0
1 2487071 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.816;LDAF=0.0189;AVGPOST=0.9955;RSQ=0.9160;ERATE=0.0004;THETA=0.0006;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 2487286 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.710;LDAF=0.0021;AVGPOST=0.9973;RSQ=0.4647;ERATE=0.0012;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2487294 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.716;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5526;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2487316 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.715;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5198;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2487555 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0040;AVGPOST=0.9990;RSQ=0.9083;ERATE=0.0004;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2487663 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.5351;AVGPOST=0.9924;RSQ=0.9882;ERATE=0.0012;THETA=0.0004;AC=1171;AN=2184 GT:DS:GL:BD 0.53617215 1
1 2487693 . TGA T 20 PASS INDEL;BAVGPOST=0.999;BRSQ=0.589;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4325;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2487766 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5495;AVGPOST=0.9968;RSQ=0.9949;ERATE=0.0004;THETA=0.0011;AC=1201;AN=2184 GT:DS:GL:BD 0.54990840 1
1 2487801 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.697;LDAF=0.0015;AVGPOST=0.9982;RSQ=0.5532;ERATE=0.0004;THETA=0.0029;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2487855 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.8771;ERATE=0.0005;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2487877 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0042;AVGPOST=0.9987;RSQ=0.8723;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2487883 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0101;AVGPOST=0.9987;RSQ=0.9525;ERATE=0.0004;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 2487984 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2487987 . A ATTCTCT 363 PASS INDEL;BAVGPOST=0.999;BRSQ=0.558;LDAF=0.0034;AVGPOST=0.9949;RSQ=0.3542;ERATE=0.0013;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2488087 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2488112 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.894;LDAF=0.0028;AVGPOST=0.9997;RSQ=0.9619;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2488153 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5451;AVGPOST=0.9983;RSQ=0.9976;ERATE=0.0012;THETA=0.0005;AC=1190;AN=2184 GT:DS:GL:BD 0.54487181 1
1 2488203 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9647;ERATE=0.0004;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2488398 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.917;LDAF=0.0219;AVGPOST=0.9967;RSQ=0.9365;ERATE=0.0017;THETA=0.0006;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 2488405 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.809;LDAF=0.0036;AVGPOST=0.9963;RSQ=0.6242;ERATE=0.0007;THETA=0.0025;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2488421 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.690;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5386;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2488481 . TGTCTCTGGGC T 2672 PASS INDEL;BAVGPOST=0.962;BRSQ=0.541;LDAF=0.0413;AVGPOST=0.9580;RSQ=0.6303;ERATE=0.0012;THETA=0.0016;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 2488560 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.913;LDAF=0.0184;AVGPOST=0.9952;RSQ=0.8914;ERATE=0.0014;THETA=0.0015;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 2488608 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.947;LDAF=0.5759;AVGPOST=0.9387;RSQ=0.9057;ERATE=0.0150;THETA=0.0004;AC=1256;AN=2184 GT:DS:GL:BD 0.57509160 1
1 2488669 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.400;LDAF=0.0017;AVGPOST=0.9974;RSQ=0.3372;ERATE=0.0006;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2488771 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.563;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4947;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2488843 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.682;LDAF=0.0025;AVGPOST=0.9963;RSQ=0.4735;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2488881 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.767;LDAF=0.0034;AVGPOST=0.9975;RSQ=0.7230;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2488901 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0069;AVGPOST=0.9976;RSQ=0.8542;ERATE=0.0004;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2488913 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0056;AVGPOST=0.9996;RSQ=0.9650;ERATE=0.0003;THETA=0.0014;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2488930 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.5554;AVGPOST=0.9859;RSQ=0.9795;ERATE=0.0025;THETA=0.0002;AC=1213;AN=2184 GT:DS:GL:BD 0.55540293 1
1 2488944 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.693;LDAF=0.0028;AVGPOST=0.9979;RSQ=0.7154;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2488984 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7709;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2489158 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2489200 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0094;AVGPOST=0.9994;RSQ=0.9762;ERATE=0.0003;THETA=0.0010;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2489413 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.734;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5189;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2489501 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9871;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2489597 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.937;LDAF=0.0093;AVGPOST=0.9984;RSQ=0.9343;ERATE=0.0007;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2489607 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6343;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2489707 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7766;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2489708 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0009;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2489734 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0006;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2489768 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9904;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2489804 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8540;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2489846 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0006;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2489981 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6027;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2490088 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.779;LDAF=0.0036;AVGPOST=0.9982;RSQ=0.8166;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2490174 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9721;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2490210 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0031;AVGPOST=0.9988;RSQ=0.8304;ERATE=0.0004;THETA=0.0012;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2490219 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8136;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2490452 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.688;LDAF=0.0065;AVGPOST=0.9979;RSQ=0.8649;ERATE=0.0004;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2490513 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0076;AVGPOST=0.9966;RSQ=0.8422;ERATE=0.0006;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2490671 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7116;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2490799 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0088;AVGPOST=0.9984;RSQ=0.9128;ERATE=0.0006;THETA=0.0027;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2490898 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.5754;AVGPOST=0.9940;RSQ=0.9911;ERATE=0.0007;THETA=0.0008;AC=1259;AN=2184 GT:DS:GL:BD 0.57646519 1
1 2490899 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0022;AVGPOST=0.9981;RSQ=0.6267;ERATE=0.0007;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2490922 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0127;AVGPOST=0.9984;RSQ=0.9467;ERATE=0.0004;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 2490934 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5809;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2490942 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.5379;AVGPOST=0.9919;RSQ=0.9880;ERATE=0.0010;THETA=0.0008;AC=1175;AN=2184 GT:DS:GL:BD 0.53800368 1
1 2491039 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2491060 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0213;AVGPOST=0.9964;RSQ=0.9336;ERATE=0.0018;THETA=0.0004;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 2491061 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.778;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8870;ERATE=0.0004;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2491071 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0034;AVGPOST=0.9993;RSQ=0.9106;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2491132 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0182;AVGPOST=0.9993;RSQ=0.9844;ERATE=0.0003;THETA=0.0008;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 2491164 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0211;AVGPOST=0.9970;RSQ=0.9429;ERATE=0.0004;THETA=0.0006;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 2491205 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.5790;AVGPOST=0.9913;RSQ=0.9869;ERATE=0.0023;THETA=0.0018;AC=1262;AN=2184 GT:DS:GL:BD 0.57783884 1
1 2491278 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8540;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2491305 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.968;LDAF=0.0140;AVGPOST=0.9973;RSQ=0.9237;ERATE=0.0019;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 2491306 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0214;AVGPOST=0.9993;RSQ=0.9869;ERATE=0.0003;THETA=0.0006;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 2491341 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9558;ERATE=0.0008;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2491365 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0021;AVGPOST=0.9964;RSQ=0.2622;ERATE=0.0012;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2491444 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5687;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2491873 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5058;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2491899 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0063;AVGPOST=0.9993;RSQ=0.9527;ERATE=0.0005;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2492065 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2492123 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0056;AVGPOST=0.9999;RSQ=0.9881;ERATE=0.0003;THETA=0.0012;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2492202 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2492276 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.944;LDAF=0.0370;AVGPOST=0.9959;RSQ=0.9567;ERATE=0.0006;THETA=0.0013;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 2492411 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0059;AVGPOST=0.9982;RSQ=0.8951;ERATE=0.0003;THETA=0.0042;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2492435 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0049;AVGPOST=0.9990;RSQ=0.9357;ERATE=0.0004;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2492541 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0022;AVGPOST=0.9989;RSQ=0.7748;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2492641 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.845;LDAF=0.0045;AVGPOST=0.9980;RSQ=0.8271;ERATE=0.0004;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2492665 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.971;LDAF=0.1020;AVGPOST=0.9952;RSQ=0.9792;ERATE=0.0004;THETA=0.0005;AC=220;AN=2184 GT:DS:GL:BD 0.10073260 0
1 2492783 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.895;LDAF=0.0085;AVGPOST=0.9989;RSQ=0.9432;ERATE=0.0004;THETA=0.0098;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2492804 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5736;ERATE=0.0004;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2492805 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0061;AVGPOST=0.9996;RSQ=0.9681;ERATE=0.0003;THETA=0.0027;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2492863 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8315;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2492946 . AG A 787 PASS INDEL;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0045;AVGPOST=0.9979;RSQ=0.8020;ERATE=0.0007;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2493136 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9709;ERATE=0.0005;THETA=0.0032;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2493158 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2493296 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2493360 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.939;LDAF=0.0108;AVGPOST=0.9980;RSQ=0.9242;ERATE=0.0004;THETA=0.0007;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 2493472 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.8802;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2493499 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.753;LDAF=0.0025;AVGPOST=0.9977;RSQ=0.6120;ERATE=0.0008;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2493519 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2493530 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0371;AVGPOST=0.9980;RSQ=0.9835;ERATE=0.0005;THETA=0.0006;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 2493579 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0034;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2493611 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0212;AVGPOST=0.9989;RSQ=0.9803;ERATE=0.0003;THETA=0.0005;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 2493618 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0024;AVGPOST=0.9978;RSQ=0.6665;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2493705 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.817;LDAF=0.0136;AVGPOST=0.9957;RSQ=0.8759;ERATE=0.0004;THETA=0.0007;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 2493731 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.655;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.7769;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2493755 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.917;LDAF=0.0101;AVGPOST=0.9982;RSQ=0.9228;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 2493784 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.698;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6051;ERATE=0.0005;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2493892 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0091;AVGPOST=0.9986;RSQ=0.9338;ERATE=0.0006;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 2494034 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8856;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2494142 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7882;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2494203 . CAGG C 130 PASS INDEL;BAVGPOST=0.999;BRSQ=0.635;LDAF=0.0030;AVGPOST=0.9958;RSQ=0.4175;ERATE=0.0011;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2494330 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1143;AVGPOST=0.9996;RSQ=0.9984;ERATE=0.0003;THETA=0.0005;AC=248;AN=2184 GT:DS:GL:BD 0.11355311 0
1 2494351 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8400;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2494366 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2494524 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2494525 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2494541 . A AG 41 PASS INDEL;BAVGPOST=0.999;BRSQ=0.611;LDAF=0.0041;AVGPOST=0.9940;RSQ=0.4971;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2494561 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=0.9999;RSQ=0.9841;ERATE=0.0006;THETA=0.0014;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2494649 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2494655 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2494728 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2494731 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2494755 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2494785 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5722;AVGPOST=0.9994;RSQ=0.9990;ERATE=0.0004;THETA=0.0007;AC=1249;AN=2184 GT:DS:GL:BD 0.57188642 1
1 2494816 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0137;AVGPOST=0.9991;RSQ=0.9761;ERATE=0.0005;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2494886 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.7185;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2495052 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.844;LDAF=0.0023;AVGPOST=0.9980;RSQ=0.6474;ERATE=0.0006;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2495088 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0221;AVGPOST=0.9984;RSQ=0.9706;ERATE=0.0005;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 2495410 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0018;AVGPOST=0.9988;RSQ=0.7466;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2495452 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6144;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2495495 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0137;AVGPOST=0.9990;RSQ=0.9723;ERATE=0.0004;THETA=0.0026;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2495673 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.713;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6542;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2495682 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.559;LDAF=0.0016;AVGPOST=0.9981;RSQ=0.4778;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2495778 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.567;LDAF=0.0022;AVGPOST=0.9974;RSQ=0.5668;ERATE=0.0004;THETA=0.0026;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2495825 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.707;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2495911 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0147;AVGPOST=0.9988;RSQ=0.9641;ERATE=0.0005;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 2495946 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.896;LDAF=0.0153;AVGPOST=0.9993;RSQ=0.9825;ERATE=0.0004;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 2495966 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.772;LDAF=0.0046;AVGPOST=0.9985;RSQ=0.8521;ERATE=0.0004;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2495985 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.825;LDAF=0.0025;AVGPOST=0.9978;RSQ=0.5912;ERATE=0.0007;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2496056 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0020;AVGPOST=0.9969;RSQ=0.3647;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2496161 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.5829;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2496179 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0220;AVGPOST=0.9987;RSQ=0.9765;ERATE=0.0004;THETA=0.0008;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 2496207 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.854;LDAF=0.0076;AVGPOST=0.9982;RSQ=0.9098;ERATE=0.0004;THETA=0.0019;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2496214 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5484;AVGPOST=0.9961;RSQ=0.9936;ERATE=0.0005;THETA=0.0008;AC=1197;AN=2184 GT:DS:GL:BD 0.54807693 1
1 2496319 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0386;AVGPOST=0.9986;RSQ=0.9888;ERATE=0.0004;THETA=0.0003;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 2496463 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2496521 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9359;ERATE=0.0003;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2496582 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.889;LDAF=0.9927;AVGPOST=0.9988;RSQ=0.9236;ERATE=0.0004;THETA=0.0009;AC=2169;AN=2184 GT:DS:GL:BD 0.99313188 1
1 2496649 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.991;LDAF=0.5412;AVGPOST=0.9928;RSQ=0.9885;ERATE=0.0004;THETA=0.0005;AC=1182;AN=2184 GT:DS:GL:BD 0.54120880 1
1 2496653 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.6035;AVGPOST=0.9931;RSQ=0.9892;ERATE=0.0008;THETA=0.0028;AC=1318;AN=2184 GT:DS:GL:BD 0.60347986 1
1 2496714 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.719;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5677;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2496741 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.811;LDAF=0.0067;AVGPOST=0.9939;RSQ=0.6747;ERATE=0.0011;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2496774 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0054;AVGPOST=0.9983;RSQ=0.8855;ERATE=0.0005;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2496800 . GGAA G 111 PASS INDEL;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0024;AVGPOST=0.9980;RSQ=0.6201;ERATE=0.0007;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2496917 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.986;LDAF=0.0382;AVGPOST=0.9995;RSQ=0.9940;ERATE=0.0004;THETA=0.0010;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 2496927 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0138;AVGPOST=0.9989;RSQ=0.9634;ERATE=0.0004;THETA=0.0007;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2497271 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.718;LDAF=0.0027;AVGPOST=0.9955;RSQ=0.2625;ERATE=0.0006;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2497274 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.599;LDAF=0.0029;AVGPOST=0.9952;RSQ=0.3606;ERATE=0.0009;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2497443 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6283;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2497465 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0044;AVGPOST=0.9977;RSQ=0.8378;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2497603 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5011;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2497641 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5787;AVGPOST=0.9975;RSQ=0.9957;ERATE=0.0007;THETA=0.0006;AC=1263;AN=2184 GT:DS:GL:BD 0.57829672 1
1 2497678 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.5422;AVGPOST=0.9967;RSQ=0.9942;ERATE=0.0006;THETA=0.0004;AC=1182;AN=2184 GT:DS:GL:BD 0.54120880 1
1 2497972 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0227;AVGPOST=0.9968;RSQ=0.9411;ERATE=0.0007;THETA=0.0005;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 2498027 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.6058;AVGPOST=0.9955;RSQ=0.9937;ERATE=0.0006;THETA=0.0001;AC=1323;AN=2184 GT:DS:GL:BD 0.60576922 1
1 2498052 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.976;LDAF=0.5330;AVGPOST=0.9713;RSQ=0.9545;ERATE=0.0054;THETA=0.0008;AC=1171;AN=2184 GT:DS:GL:BD 0.53617215 1
1 2498063 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.893;LDAF=0.0138;AVGPOST=0.9981;RSQ=0.9341;ERATE=0.0006;THETA=0.0010;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2498115 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.719;LDAF=0.0039;AVGPOST=0.9931;RSQ=0.2795;ERATE=0.0011;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2498123 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.744;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4279;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2498261 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.844;LDAF=0.0146;AVGPOST=0.9979;RSQ=0.9400;ERATE=0.0004;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 2498268 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.715;LDAF=0.0363;AVGPOST=0.9666;RSQ=0.6247;ERATE=0.0051;THETA=0.0005;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 2498276 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0108;AVGPOST=0.9963;RSQ=0.8549;ERATE=0.0006;THETA=0.0008;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2498314 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.417;LDAF=0.0028;AVGPOST=0.9965;RSQ=0.4809;ERATE=0.0008;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2498377 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0105;AVGPOST=0.9968;RSQ=0.8684;ERATE=0.0007;THETA=0.0017;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2498569 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.632;LDAF=0.0048;AVGPOST=0.9955;RSQ=0.6131;ERATE=0.0012;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2498585 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.722;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.5930;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2498618 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.5938;AVGPOST=0.9878;RSQ=0.9817;ERATE=0.0024;THETA=0.0007;AC=1297;AN=2184 GT:DS:GL:BD 0.59386444 1
1 2498626 rs70956310 T TC 384 PASS INDEL;BAVGPOST=0.997;BRSQ=0.891;LDAF=0.0154;AVGPOST=0.9952;RSQ=0.8637;ERATE=0.0006;THETA=0.0039;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2498629 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.634;LDAF=0.0077;AVGPOST=0.9932;RSQ=0.6768;ERATE=0.0005;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2498674 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.640;LDAF=0.0028;AVGPOST=0.9962;RSQ=0.4947;ERATE=0.0007;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2498862 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5405;AVGPOST=0.9974;RSQ=0.9955;ERATE=0.0007;THETA=0.0002;AC=1180;AN=2184 GT:DS:GL:BD 0.54029304 1
1 2498954 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0049;AVGPOST=0.9994;RSQ=0.9488;ERATE=0.0003;THETA=0.0010;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2499025 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0155;AVGPOST=0.9980;RSQ=0.9537;ERATE=0.0005;THETA=0.0005;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 2499183 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0173;AVGPOST=0.9963;RSQ=0.9093;ERATE=0.0008;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 2499254 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.991;LDAF=0.5193;AVGPOST=0.9931;RSQ=0.9894;ERATE=0.0011;THETA=0.0004;AC=1135;AN=2184 GT:DS:GL:BD 0.51968867 1
1 2499265 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6112;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2499281 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.676;LDAF=0.0016;AVGPOST=0.9975;RSQ=0.3224;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2499459 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.950;BRSQ=0.905;LDAF=0.5390;AVGPOST=0.8813;RSQ=0.8230;ERATE=0.0112;THETA=0.0008;AC=1196;AN=2184 GT:DS:GL:BD 0.54761904 1
1 2499780 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.960;LDAF=0.5781;AVGPOST=0.9012;RSQ=0.8552;ERATE=0.0130;THETA=0.0007;AC=1280;AN=2184 GT:DS:GL:BD 0.58608061 1
1 2499810 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.984;LDAF=0.5293;AVGPOST=0.9452;RSQ=0.9168;ERATE=0.0056;THETA=0.0006;AC=1159;AN=2184 GT:DS:GL:BD 0.53067768 1
1 2499898 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.931;BRSQ=0.877;LDAF=0.4602;AVGPOST=0.9564;RSQ=0.9337;ERATE=0.0015;THETA=0.0005;AC=1001;AN=2184 GT:DS:GL:BD 0.45833334 0
1 2500008 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.811;LDAF=0.0137;AVGPOST=0.9924;RSQ=0.7895;ERATE=0.0005;THETA=0.0006;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 2500399 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.523;LDAF=0.0335;AVGPOST=0.9612;RSQ=0.5482;ERATE=0.0050;THETA=0.0002;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 2500545 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.858;LDAF=0.0131;AVGPOST=0.9976;RSQ=0.9284;ERATE=0.0004;THETA=0.0002;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 2500554 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.654;LDAF=0.0033;AVGPOST=0.9955;RSQ=0.4236;ERATE=0.0007;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2500631 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.600;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7329;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2500637 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7841;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2500639 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0218;AVGPOST=0.9951;RSQ=0.9021;ERATE=0.0007;THETA=0.0010;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 2500663 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.739;LDAF=0.0036;AVGPOST=0.9960;RSQ=0.5435;ERATE=0.0007;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2500737 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.735;LDAF=0.0023;AVGPOST=0.9973;RSQ=0.4957;ERATE=0.0007;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2500787 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7495;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2500841 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.657;LDAF=0.0016;AVGPOST=0.9982;RSQ=0.5457;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2500893 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.984;LDAF=0.5241;AVGPOST=0.9882;RSQ=0.9814;ERATE=0.0026;THETA=0.0005;AC=1148;AN=2184 GT:DS:GL:BD 0.52564102 1
1 2501015 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.392;LDAF=0.0041;AVGPOST=0.9948;RSQ=0.4880;ERATE=0.0011;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2501064 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.844;LDAF=0.0776;AVGPOST=0.9665;RSQ=0.8300;ERATE=0.0013;THETA=0.0005;AC=157;AN=2184 GT:DS:GL:BD 0.07188645 0
1 2501222 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.992;LDAF=0.4375;AVGPOST=0.9943;RSQ=0.9908;ERATE=0.0009;THETA=0.0002;AC=955;AN=2184 GT:DS:GL:BD 0.43727106 0
1 2501308 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.639;LDAF=0.0054;AVGPOST=0.9948;RSQ=0.6197;ERATE=0.0006;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2501338 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.983;LDAF=0.5271;AVGPOST=0.9963;RSQ=0.9937;ERATE=0.0006;THETA=0.0005;AC=1152;AN=2184 GT:DS:GL:BD 0.52747256 1
1 2501455 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4046;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2501516 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.980;LDAF=0.5219;AVGPOST=0.9874;RSQ=0.9810;ERATE=0.0038;THETA=0.0008;AC=1143;AN=2184 GT:DS:GL:BD 0.52335167 1
1 2501624 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7765;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2501631 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7764;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2501722 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0147;AVGPOST=0.9998;RSQ=0.9930;ERATE=0.0003;THETA=0.0011;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 2501917 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9354;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2501952 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9058;ERATE=0.0005;THETA=0.0026;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2502010 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5560;AVGPOST=0.9993;RSQ=0.9987;ERATE=0.0004;THETA=0.0008;AC=1214;AN=2184 GT:DS:GL:BD 0.55586082 1
1 2502026 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0147;AVGPOST=0.9999;RSQ=0.9957;ERATE=0.0003;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 2502047 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6288;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2502087 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7873;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2502173 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2502357 . CACTT C 38 PASS INDEL;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5291;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2502398 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0149;AVGPOST=0.9995;RSQ=0.9850;ERATE=0.0003;THETA=0.0008;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 2502607 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0147;AVGPOST=0.9997;RSQ=0.9915;ERATE=0.0003;THETA=0.0006;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 2502637 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6351;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2502668 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0054;AVGPOST=0.9989;RSQ=0.9465;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2502694 . G GA 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4335;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2502780 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5415;AVGPOST=0.9988;RSQ=0.9979;ERATE=0.0004;THETA=0.0004;AC=1182;AN=2184 GT:DS:GL:BD 0.54120880 1
1 2502834 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5399;AVGPOST=0.9921;RSQ=0.9884;ERATE=0.0014;THETA=0.0003;AC=1181;AN=2184 GT:DS:GL:BD 0.54075092 1
1 2502897 . AG A 9 PASS INDEL;BAVGPOST=0.999;BRSQ=0.585;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7417;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2502920 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0217;AVGPOST=0.9996;RSQ=0.9914;ERATE=0.0003;THETA=0.0005;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 2503125 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.723;LDAF=0.0050;AVGPOST=0.9964;RSQ=0.7023;ERATE=0.0007;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2503202 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0026;AVGPOST=0.9984;RSQ=0.7251;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2503248 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6921;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2503305 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.719;LDAF=0.0024;AVGPOST=0.9982;RSQ=0.6962;ERATE=0.0006;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2503355 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.736;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.6744;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2503433 . A AAT 27 PASS INDEL;BAVGPOST=0.999;BRSQ=0.786;LDAF=0.0049;AVGPOST=0.9940;RSQ=0.5097;ERATE=0.0012;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2503476 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.865;LDAF=0.0172;AVGPOST=0.9955;RSQ=0.9002;ERATE=0.0003;THETA=0.0006;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 2503591 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.942;LDAF=0.0188;AVGPOST=0.9926;RSQ=0.8493;ERATE=0.0011;THETA=0.0010;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 2503683 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7629;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2503849 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.852;LDAF=0.0100;AVGPOST=0.9960;RSQ=0.8428;ERATE=0.0004;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 2503895 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4609;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2503975 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2503982 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8500;ERATE=0.0006;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2503983 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6040;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2504102 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0138;AVGPOST=0.9997;RSQ=0.9908;ERATE=0.0003;THETA=0.0007;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 2504155 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7494;ERATE=0.0004;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2504234 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5799;AVGPOST=0.9979;RSQ=0.9967;ERATE=0.0004;THETA=0.0003;AC=1266;AN=2184 GT:DS:GL:BD 0.57967031 1
1 2504240 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9647;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2504281 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.917;LDAF=0.0113;AVGPOST=0.9981;RSQ=0.9350;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 2504290 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.880;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6983;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2504363 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1026;AVGPOST=0.9995;RSQ=0.9974;ERATE=0.0004;THETA=0.0004;AC=222;AN=2184 GT:DS:GL:BD 0.10164835 0
1 2504384 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7725;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2504708 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2504733 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0043;AVGPOST=0.9994;RSQ=0.9580;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2504736 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.653;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8648;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2504752 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8848;ERATE=0.0006;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2504785 . ATG A 155 PASS INDEL;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4787;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2505074 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0036;AVGPOST=0.9995;RSQ=0.9451;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2505141 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2505229 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0025;AVGPOST=0.9975;RSQ=0.6546;ERATE=0.0003;THETA=0.0036;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2505301 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.859;LDAF=0.0057;AVGPOST=0.9987;RSQ=0.9131;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2505362 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0137;AVGPOST=0.9996;RSQ=0.9880;ERATE=0.0004;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 2505379 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.744;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8476;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2505556 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0148;AVGPOST=0.9997;RSQ=0.9905;ERATE=0.0003;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 2505628 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0054;AVGPOST=0.9992;RSQ=0.9337;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2505645 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.759;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.7753;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2505646 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7787;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2505713 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1024;AVGPOST=0.9992;RSQ=0.9969;ERATE=0.0003;THETA=0.0006;AC=222;AN=2184 GT:DS:GL:BD 0.10164835 0
1 2505769 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8177;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2505774 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7109;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2505899 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2505941 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2506059 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0216;AVGPOST=0.9997;RSQ=0.9941;ERATE=0.0003;THETA=0.0006;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 2506132 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.898;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.8893;ERATE=0.0008;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2506174 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.837;LDAF=0.0010;AVGPOST=0.9980;RSQ=0.2417;ERATE=0.0004;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 2506187 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.871;LDAF=0.0038;AVGPOST=0.9965;RSQ=0.6485;ERATE=0.0006;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2506196 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.802;LDAF=0.0023;AVGPOST=0.9980;RSQ=0.6602;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2506198 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.711;LDAF=0.0024;AVGPOST=0.9968;RSQ=0.5023;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2506213 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.7036;ERATE=0.0005;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2506229 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.976;LDAF=0.2672;AVGPOST=0.9907;RSQ=0.9823;ERATE=0.0004;THETA=0.0007;AC=584;AN=2184 GT:DS:GL:BD 0.26739928 0
1 2506359 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.716;LDAF=0.9793;AVGPOST=0.9810;RSQ=0.6411;ERATE=0.0069;THETA=0.0005;AC=2157;AN=2184 GT:DS:GL:BD 0.98763734 1
1 2506397 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.691;LDAF=0.0178;AVGPOST=0.9879;RSQ=0.7472;ERATE=0.0045;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 2506411 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.600;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5875;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2506455 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0051;AVGPOST=0.9993;RSQ=0.9392;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2506483 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.703;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5165;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2506488 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.985;LDAF=0.5652;AVGPOST=0.9759;RSQ=0.9630;ERATE=0.0056;THETA=0.0005;AC=1241;AN=2184 GT:DS:GL:BD 0.56822342 1
1 2506494 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0094;AVGPOST=0.9970;RSQ=0.8799;ERATE=0.0007;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2506651 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7129;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2506676 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0201;AVGPOST=0.9990;RSQ=0.9840;ERATE=0.0004;THETA=0.0005;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 2506686 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.831;LDAF=0.0055;AVGPOST=0.9973;RSQ=0.8039;ERATE=0.0006;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2506752 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4119;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2506765 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6129;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2506797 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5495;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2506851 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7478;ERATE=0.0008;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2506861 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.950;LDAF=0.0112;AVGPOST=0.9995;RSQ=0.9766;ERATE=0.0004;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 2507079 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2507086 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0028;AVGPOST=0.9981;RSQ=0.7181;ERATE=0.0006;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2507162 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4347;ERATE=0.0007;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2507252 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0039;AVGPOST=0.9979;RSQ=0.7740;ERATE=0.0005;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2507359 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0014;AVGPOST=0.9978;RSQ=0.4189;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2507388 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0138;AVGPOST=0.9996;RSQ=0.9859;ERATE=0.0003;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 2507405 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0019;AVGPOST=0.9996;RSQ=0.9119;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2507414 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.760;LDAF=0.0030;AVGPOST=0.9988;RSQ=0.8392;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2507415 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.989;LDAF=0.4231;AVGPOST=0.9896;RSQ=0.9847;ERATE=0.0007;THETA=0.0005;AC=923;AN=2184 GT:DS:GL:BD 0.42261904 0
1 2507442 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.800;LDAF=0.0045;AVGPOST=0.9977;RSQ=0.7894;ERATE=0.0005;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2507607 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5910;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2507666 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4783;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2507701 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7148;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2507737 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5809;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2507757 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4730;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2507872 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5286;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2507899 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.764;LDAF=0.0023;AVGPOST=0.9977;RSQ=0.6363;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2507938 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5222;AVGPOST=0.9964;RSQ=0.9944;ERATE=0.0007;THETA=0.0008;AC=1141;AN=2184 GT:DS:GL:BD 0.52243590 1
1 2507960 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0048;AVGPOST=0.9996;RSQ=0.9678;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2507971 . T TC 1327 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0144;AVGPOST=0.9984;RSQ=0.9500;ERATE=0.0005;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 2508016 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4710;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2508386 . T TA 7 PASS INDEL;BAVGPOST=0.999;BRSQ=0.636;LDAF=0.0078;AVGPOST=0.9879;RSQ=0.3728;ERATE=0.0014;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2508482 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0205;AVGPOST=0.9966;RSQ=0.9433;ERATE=0.0004;THETA=0.0004;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 2508529 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.699;LDAF=0.0104;AVGPOST=0.9948;RSQ=0.7872;ERATE=0.0007;THETA=0.0007;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 2508638 . CTG C 42 PASS INDEL;BAVGPOST=0.999;BRSQ=0.574;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.3713;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2508716 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0152;AVGPOST=0.9970;RSQ=0.9162;ERATE=0.0007;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 2508722 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0173;AVGPOST=0.9927;RSQ=0.8431;ERATE=0.0010;THETA=0.0007;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 2508788 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5545;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2508931 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6368;ERATE=0.0005;THETA=0.0027;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2509188 . G GC 65 PASS INDEL;BAVGPOST=0.996;BRSQ=0.541;LDAF=0.0125;AVGPOST=0.9875;RSQ=0.5896;ERATE=0.0008;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 2509252 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0143;AVGPOST=0.9988;RSQ=0.9600;ERATE=0.0004;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 2509281 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.832;LDAF=0.0124;AVGPOST=0.9949;RSQ=0.8541;ERATE=0.0006;THETA=0.0007;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 2509369 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0141;AVGPOST=0.9993;RSQ=0.9748;ERATE=0.0004;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 2509645 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.604;LDAF=0.0072;AVGPOST=0.9937;RSQ=0.6452;ERATE=0.0010;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2509720 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.736;LDAF=0.0018;AVGPOST=0.9979;RSQ=0.5420;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2509794 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0036;AVGPOST=0.9972;RSQ=0.7159;ERATE=0.0004;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2509858 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5826;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2509868 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0140;AVGPOST=0.9994;RSQ=0.9800;ERATE=0.0004;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 2509875 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.0063;AVGPOST=0.9991;RSQ=0.9366;ERATE=0.0004;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2510043 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0141;AVGPOST=0.9992;RSQ=0.9737;ERATE=0.0004;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 2510135 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.4616;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2510246 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6467;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2510377 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0140;AVGPOST=0.9994;RSQ=0.9786;ERATE=0.0004;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 2510446 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9607;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2510605 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.939;LDAF=0.0247;AVGPOST=0.9971;RSQ=0.9527;ERATE=0.0004;THETA=0.0004;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 2510755 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.1047;AVGPOST=0.9947;RSQ=0.9773;ERATE=0.0008;THETA=0.0009;AC=222;AN=2184 GT:DS:GL:BD 0.10164835 0
1 2510808 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0107;AVGPOST=0.9975;RSQ=0.9090;ERATE=0.0005;THETA=0.0008;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 2510913 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0125;AVGPOST=0.9955;RSQ=0.8546;ERATE=0.0005;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 2510916 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.953;LDAF=0.0203;AVGPOST=0.9983;RSQ=0.9651;ERATE=0.0006;THETA=0.0009;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 2511226 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0127;AVGPOST=0.9993;RSQ=0.9771;ERATE=0.0003;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 2511270 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0053;AVGPOST=0.9971;RSQ=0.8200;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2511280 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5717;AVGPOST=0.9987;RSQ=0.9979;ERATE=0.0004;THETA=0.0002;AC=1247;AN=2184 GT:DS:GL:BD 0.57097071 1
1 2511298 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2511388 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1223;AVGPOST=0.9994;RSQ=0.9976;ERATE=0.0004;THETA=0.0002;AC=265;AN=2184 GT:DS:GL:BD 0.12133700 0
1 2511427 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2511574 . A AGATG 40 PASS INDEL;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5229;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2511647 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.784;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.5828;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2511896 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5926;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2511910 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.776;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7811;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2512150 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0152;AVGPOST=0.9975;RSQ=0.9353;ERATE=0.0004;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 2512205 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0017;AVGPOST=0.9976;RSQ=0.4592;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2512282 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8570;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2512289 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0137;AVGPOST=0.9999;RSQ=0.9967;ERATE=0.0003;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 2512361 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.822;LDAF=0.0353;AVGPOST=0.9932;RSQ=0.9282;ERATE=0.0004;THETA=0.0005;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 2512452 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5921;AVGPOST=0.9988;RSQ=0.9981;ERATE=0.0004;THETA=0.0004;AC=1292;AN=2184 GT:DS:GL:BD 0.59157509 1
1 2512456 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.915;LDAF=0.0201;AVGPOST=0.9958;RSQ=0.9217;ERATE=0.0003;THETA=0.0004;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 2512548 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2512650 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.5771;AVGPOST=0.9953;RSQ=0.9928;ERATE=0.0007;THETA=0.0005;AC=1262;AN=2184 GT:DS:GL:BD 0.57783884 1
1 2512710 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.5765;AVGPOST=0.9920;RSQ=0.9876;ERATE=0.0014;THETA=0.0003;AC=1263;AN=2184 GT:DS:GL:BD 0.57829672 1
1 2512786 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0016;AVGPOST=0.9983;RSQ=0.5084;ERATE=0.0007;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2512816 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.751;LDAF=0.0015;AVGPOST=0.9981;RSQ=0.4711;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2512955 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0029;AVGPOST=0.9993;RSQ=0.8926;ERATE=0.0006;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2513014 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0221;AVGPOST=0.9997;RSQ=0.9931;ERATE=0.0003;THETA=0.0005;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 2513055 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5916;AVGPOST=0.9991;RSQ=0.9985;ERATE=0.0004;THETA=0.0002;AC=1292;AN=2184 GT:DS:GL:BD 0.59157509 1
1 2513105 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1065;AVGPOST=0.9988;RSQ=0.9947;ERATE=0.0003;THETA=0.0004;AC=230;AN=2184 GT:DS:GL:BD 0.10531136 0
1 2513128 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.7056;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2513144 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2513161 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0203;AVGPOST=0.9996;RSQ=0.9923;ERATE=0.0003;THETA=0.0003;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 2513164 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0052;AVGPOST=0.9984;RSQ=0.8825;ERATE=0.0004;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2513179 . CAA C 355 PASS INDEL;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0057;AVGPOST=0.9966;RSQ=0.7439;ERATE=0.0005;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2513215 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.762;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6746;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2513216 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5777;AVGPOST=0.9982;RSQ=0.9972;ERATE=0.0004;THETA=0.0002;AC=1262;AN=2184 GT:DS:GL:BD 0.57783884 1
1 2513280 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6529;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2513284 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2513320 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0017;AVGPOST=0.9995;RSQ=0.9023;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2513594 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.574;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.5938;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2513632 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5912;AVGPOST=0.9975;RSQ=0.9958;ERATE=0.0008;THETA=0.0005;AC=1292;AN=2184 GT:DS:GL:BD 0.59157509 1
1 2513652 rs59345997 AAAAC A 45703 PASS INDEL;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.5752;AVGPOST=0.9933;RSQ=0.9896;ERATE=0.0011;THETA=0.0005;AC=1259;AN=2184 GT:DS:GL:BD 0.57646519 1
1 2513678 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5776;AVGPOST=0.9983;RSQ=0.9971;ERATE=0.0004;THETA=0.0005;AC=1262;AN=2184 GT:DS:GL:BD 0.57783884 1
1 2513840 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7582;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2513915 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7258;ERATE=0.0004;THETA=0.0034;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2514082 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0090;AVGPOST=0.9980;RSQ=0.9227;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2514261 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0066;AVGPOST=0.9978;RSQ=0.8630;ERATE=0.0006;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2514266 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2514370 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.790;LDAF=0.0037;AVGPOST=0.9979;RSQ=0.7658;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2514405 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0019;AVGPOST=0.9983;RSQ=0.6103;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2514567 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.657;LDAF=0.0049;AVGPOST=0.9912;RSQ=0.3526;ERATE=0.0008;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2514575 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.944;LDAF=0.5629;AVGPOST=0.9209;RSQ=0.8838;ERATE=0.0271;THETA=0.0007;AC=1238;AN=2184 GT:DS:GL:BD 0.56684983 1
1 2514625 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.614;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7158;ERATE=0.0006;THETA=0.0033;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2514645 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5736;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2514747 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6211;ERATE=0.0004;THETA=0.0023;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2514841 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2514866 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0133;AVGPOST=0.9998;RSQ=0.9935;ERATE=0.0003;THETA=0.0019;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2514876 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2515001 . T TC 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.650;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4988;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2515047 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.764;LDAF=0.0024;AVGPOST=0.9974;RSQ=0.5693;ERATE=0.0005;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2515137 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.908;LDAF=0.0211;AVGPOST=0.9965;RSQ=0.9332;ERATE=0.0004;THETA=0.0007;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 2515141 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6475;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2515153 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0042;AVGPOST=0.9970;RSQ=0.7676;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2515157 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9812;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2515210 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0017;AVGPOST=0.9987;RSQ=0.7203;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2515312 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2515313 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0045;AVGPOST=1.0000;RSQ=0.9952;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2515339 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0052;AVGPOST=0.9989;RSQ=0.9191;ERATE=0.0003;THETA=0.0037;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2515448 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0088;AVGPOST=0.9984;RSQ=0.9191;ERATE=0.0006;THETA=0.0031;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2515508 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0004;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2515522 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5490;ERATE=0.0004;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2515548 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7524;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2515615 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0160;AVGPOST=0.9989;RSQ=0.9704;ERATE=0.0005;THETA=0.0006;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 2515616 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2515626 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7694;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2515775 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6183;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2515778 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2515822 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7608;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2515850 . CCTGT C 318 PASS INDEL;BAVGPOST=1.000;BRSQ=0.722;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5883;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2515885 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.749;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6120;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2515957 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.933;LDAF=0.0128;AVGPOST=0.9990;RSQ=0.9642;ERATE=0.0004;THETA=0.0010;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 2516004 . CTT C 113 PASS INDEL;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0021;AVGPOST=0.9981;RSQ=0.6720;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2516338 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.896;LDAF=0.0047;AVGPOST=0.9995;RSQ=0.9505;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2516550 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.909;LDAF=0.0047;AVGPOST=0.9986;RSQ=0.8949;ERATE=0.0003;THETA=0.0010;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2516583 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0020;AVGPOST=0.9976;RSQ=0.5550;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2516781 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.986;LDAF=0.4403;AVGPOST=0.9586;RSQ=0.9404;ERATE=0.0037;THETA=0.0005;AC=972;AN=2184 GT:DS:GL:BD 0.44505495 0
1 2517049 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0251;AVGPOST=0.9992;RSQ=0.9862;ERATE=0.0004;THETA=0.0004;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 2517106 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.783;LDAF=0.0040;AVGPOST=0.9974;RSQ=0.7212;ERATE=0.0005;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2517308 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.719;LDAF=0.0040;AVGPOST=0.9962;RSQ=0.6239;ERATE=0.0009;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2517336 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.709;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5253;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2517493 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7540;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2517523 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0126;AVGPOST=0.9926;RSQ=0.7767;ERATE=0.0008;THETA=0.0009;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 2517851 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.340;LDAF=0.0198;AVGPOST=0.9777;RSQ=0.5589;ERATE=0.0013;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 2518049 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0206;AVGPOST=0.9923;RSQ=0.8569;ERATE=0.0007;THETA=0.0004;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 2518160 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.644;LDAF=0.0259;AVGPOST=0.9782;RSQ=0.6682;ERATE=0.0017;THETA=0.0008;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 2518186 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0;LDAF=0.9957;AVGPOST=0.9919;RSQ=0.2477;ERATE=0.0008;THETA=0.0026;AC=2179;AN=2184 GT:DS:GL:BD 0.99771065 1
1 2518410 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0160;AVGPOST=0.9963;RSQ=0.9065;ERATE=0.0005;THETA=0.0007;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 2518411 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0096;AVGPOST=0.9980;RSQ=0.9073;ERATE=0.0005;THETA=0.0008;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2518854 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0183;AVGPOST=0.9990;RSQ=0.9793;ERATE=0.0004;THETA=0.0009;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 2518856 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.756;LDAF=0.0026;AVGPOST=0.9976;RSQ=0.6785;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2518930 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.703;LDAF=0.0037;AVGPOST=0.9967;RSQ=0.6329;ERATE=0.0007;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2518980 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0174;AVGPOST=0.9987;RSQ=0.9646;ERATE=0.0004;THETA=0.0007;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 2518988 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2519044 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0162;AVGPOST=0.9995;RSQ=0.9848;ERATE=0.0003;THETA=0.0023;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 2519073 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2519599 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.815;LDAF=0.0118;AVGPOST=0.9948;RSQ=0.8232;ERATE=0.0005;THETA=0.0022;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 2519810 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0179;AVGPOST=0.9998;RSQ=0.9953;ERATE=0.0003;THETA=0.0010;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 2519975 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2520141 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0047;AVGPOST=0.9993;RSQ=0.9289;ERATE=0.0004;THETA=0.0039;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2520302 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4950;AVGPOST=0.9989;RSQ=0.9984;ERATE=0.0003;THETA=0.0006;AC=1083;AN=2184 GT:DS:GL:BD 0.49587911 0
1 2520428 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0045;AVGPOST=0.9998;RSQ=0.9787;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2520500 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4938;AVGPOST=0.9989;RSQ=0.9983;ERATE=0.0004;THETA=0.0003;AC=1080;AN=2184 GT:DS:GL:BD 0.49450549 0
1 2520516 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0046;AVGPOST=0.9995;RSQ=0.9525;ERATE=0.0004;THETA=0.0015;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2520527 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4938;AVGPOST=0.9989;RSQ=0.9982;ERATE=0.0004;THETA=0.0005;AC=1080;AN=2184 GT:DS:GL:BD 0.49450549 0
1 2520623 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2520714 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6895;ERATE=0.0004;THETA=0.0018;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2520743 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.918;LDAF=0.0163;AVGPOST=0.9984;RSQ=0.9547;ERATE=0.0004;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 2520820 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2521030 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0082;AVGPOST=0.9998;RSQ=0.9893;ERATE=0.0003;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2521049 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2521053 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0021;AVGPOST=0.9977;RSQ=0.6364;ERATE=0.0005;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2521058 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9212;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2521212 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0031;AVGPOST=0.9983;RSQ=0.7702;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2521384 . ACT A 17 PASS INDEL;BAVGPOST=1.000;BRSQ=0.682;LDAF=0.0021;AVGPOST=0.9965;RSQ=0.3364;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2521430 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.939;LDAF=0.1557;AVGPOST=0.9871;RSQ=0.9626;ERATE=0.0028;THETA=0.0007;AC=336;AN=2184 GT:DS:GL:BD 0.15384616 0
1 2521668 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0021;AVGPOST=0.9987;RSQ=0.7489;ERATE=0.0005;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2521680 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6096;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2521846 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.821;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.7217;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2521916 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.848;LDAF=0.0049;AVGPOST=0.9974;RSQ=0.7975;ERATE=0.0005;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2521987 . ACTCT A 112 PASS INDEL;BAVGPOST=0.998;BRSQ=0.795;LDAF=0.0042;AVGPOST=0.9970;RSQ=0.7313;ERATE=0.0006;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2521990 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0021;AVGPOST=0.9967;RSQ=0.3299;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2522132 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.762;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5771;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2522204 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.912;LDAF=0.1372;AVGPOST=0.9845;RSQ=0.9511;ERATE=0.0009;THETA=0.0008;AC=297;AN=2184 GT:DS:GL:BD 0.13598901 0
1 2522223 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.729;LDAF=0.0031;AVGPOST=0.9974;RSQ=0.6892;ERATE=0.0006;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2522266 . CA C 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.656;LDAF=0.0032;AVGPOST=0.9961;RSQ=0.5307;ERATE=0.0007;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2522356 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0056;AVGPOST=0.9988;RSQ=0.9050;ERATE=0.0004;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2522385 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7059;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2522392 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.979;LDAF=0.2441;AVGPOST=0.9887;RSQ=0.9777;ERATE=0.0006;THETA=0.0005;AC=531;AN=2184 GT:DS:GL:BD 0.24313186 0
1 2522487 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7756;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2522677 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2522852 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0100;AVGPOST=0.9988;RSQ=0.9527;ERATE=0.0003;THETA=0.0014;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2522893 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2522925 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0326;AVGPOST=0.9993;RSQ=0.9905;ERATE=0.0004;THETA=0.0005;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 2522983 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2523015 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2523113 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9691;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2523212 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4330;AVGPOST=0.9986;RSQ=0.9975;ERATE=0.0004;THETA=0.0006;AC=947;AN=2184 GT:DS:GL:BD 0.43360806 0
1 2523236 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9291;ERATE=0.0003;THETA=0.0012;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2523344 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0133;AVGPOST=1.0000;RSQ=0.9983;ERATE=0.0003;THETA=0.0008;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2523361 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0028;AVGPOST=0.9997;RSQ=0.9555;ERATE=0.0007;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2523418 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9304;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2523431 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2523668 . G GA 41 PASS INDEL;BAVGPOST=0.998;BRSQ=0.342;LDAF=0.0044;AVGPOST=0.9921;RSQ=0.2684;ERATE=0.0009;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2523696 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0137;AVGPOST=0.9991;RSQ=0.9691;ERATE=0.0004;THETA=0.0008;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2523706 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.986;LDAF=0.4360;AVGPOST=0.9822;RSQ=0.9738;ERATE=0.0030;THETA=0.0005;AC=946;AN=2184 GT:DS:GL:BD 0.43315017 0
1 2523723 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.959;LDAF=0.4531;AVGPOST=0.9835;RSQ=0.9747;ERATE=0.0027;THETA=0.0007;AC=981;AN=2184 GT:DS:GL:BD 0.44917583 0
1 2523744 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.780;LDAF=0.0398;AVGPOST=0.9813;RSQ=0.8047;ERATE=0.0020;THETA=0.0027;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 2523769 . GC G 2504 PASS INDEL;BAVGPOST=0.829;BRSQ=0.729;LDAF=0.4262;AVGPOST=0.7717;RSQ=0.6242;ERATE=0.0182;THETA=0.0019;AC=886;AN=2184 GT:DS:GL:BD 0.40567765 0
1 2523776 . CT C 484 PASS INDEL;BAVGPOST=0.738;BRSQ=0.517;LDAF=0.4160;AVGPOST=0.8010;RSQ=0.6774;ERATE=0.0092;THETA=0.0003;AC=900;AN=2184 GT:DS:GL:BD 0.41208792 0
1 2523807 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.816;BRSQ=0.672;LDAF=0.4054;AVGPOST=0.8278;RSQ=0.7272;ERATE=0.0093;THETA=0.0013;AC=873;AN=2184 GT:DS:GL:BD 0.39972529 0
1 2523810 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.806;BRSQ=0.656;LDAF=0.4019;AVGPOST=0.9314;RSQ=0.8951;ERATE=0.0017;THETA=0.0006;AC=890;AN=2184 GT:DS:GL:BD 0.40750915 0
1 2523811 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.803;BRSQ=0.649;LDAF=0.4072;AVGPOST=0.8803;RSQ=0.8099;ERATE=0.0059;THETA=0.0009;AC=879;AN=2184 GT:DS:GL:BD 0.40247253 0
1 2523818 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.824;BRSQ=0.419;LDAF=0.1937;AVGPOST=0.8815;RSQ=0.7177;ERATE=0.0051;THETA=0.0004;AC=378;AN=2184 GT:DS:GL:BD 0.17307693 0
1 2523839 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.535;BRSQ=0.103;LDAF=0.3497;AVGPOST=0.7657;RSQ=0.6105;ERATE=0.0146;THETA=0.0005;AC=753;AN=2184 GT:DS:GL:BD 0.34478021 0
1 2523863 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.841;BRSQ=0.034;LDAF=0.2016;AVGPOST=0.7162;RSQ=0.2735;ERATE=0.0228;THETA=0.0007;AC=214;AN=2184 GT:DS:GL:BD 0.09798535 0
1 2523878 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.798;BRSQ=0.033;LDAF=0.1522;AVGPOST=0.8004;RSQ=0.3707;ERATE=0.0115;THETA=0.0005;AC=212;AN=2184 GT:DS:GL:BD 0.09706960 0
1 2523879 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.790;BRSQ=0.026;LDAF=0.1587;AVGPOST=0.7937;RSQ=0.3721;ERATE=0.0114;THETA=0.0002;AC=209;AN=2184 GT:DS:GL:BD 0.09569597 0
1 2523969 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.655;BRSQ=0.350;LDAF=0.3859;AVGPOST=0.8378;RSQ=0.7411;ERATE=0.0088;THETA=0.0004;AC=836;AN=2184 GT:DS:GL:BD 0.38278389 0
1 2523978 . G GC 404 PASS INDEL;BAVGPOST=0.523;BRSQ=0.127;LDAF=0.4290;AVGPOST=0.7269;RSQ=0.5543;ERATE=0.0162;THETA=0.0022;AC=920;AN=2184 GT:DS:GL:BD 0.42124543 0
1 2523993 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.940;BRSQ=0.894;LDAF=0.4580;AVGPOST=0.9221;RSQ=0.8881;ERATE=0.0046;THETA=0.0006;AC=999;AN=2184 GT:DS:GL:BD 0.45741758 0
1 2523999 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.919;BRSQ=0.858;LDAF=0.4626;AVGPOST=0.9527;RSQ=0.9293;ERATE=0.0041;THETA=0.0007;AC=1011;AN=2184 GT:DS:GL:BD 0.46291208 0
1 2524047 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.829;BRSQ=0.654;LDAF=0.3316;AVGPOST=0.8091;RSQ=0.6578;ERATE=0.0824;THETA=0.0008;AC=663;AN=2184 GT:DS:GL:BD 0.30357143 0
1 2524164 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0045;AVGPOST=1.0000;RSQ=0.9952;ERATE=0.0005;THETA=0.0024;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2524205 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4320;AVGPOST=0.9993;RSQ=0.9988;ERATE=0.0005;THETA=0.0021;AC=944;AN=2184 GT:DS:GL:BD 0.43223444 0
1 2524242 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0225;AVGPOST=0.9998;RSQ=0.9963;ERATE=0.0003;THETA=0.0007;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 2524457 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4754;AVGPOST=0.9994;RSQ=0.9989;ERATE=0.0004;THETA=0.0005;AC=1039;AN=2184 GT:DS:GL:BD 0.47573259 0
1 2524485 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.971;LDAF=0.2223;AVGPOST=0.9933;RSQ=0.9844;ERATE=0.0006;THETA=0.0005;AC=485;AN=2184 GT:DS:GL:BD 0.22206959 0
1 2524599 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.654;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2524786 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0057;AVGPOST=0.9993;RSQ=0.9417;ERATE=0.0003;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2524793 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0031;AVGPOST=0.9976;RSQ=0.6680;ERATE=0.0006;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2524841 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.815;LDAF=0.0078;AVGPOST=0.9973;RSQ=0.8615;ERATE=0.0004;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2524895 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.963;BRSQ=0.892;LDAF=0.1923;AVGPOST=0.9864;RSQ=0.9685;ERATE=0.0005;THETA=0.0002;AC=416;AN=2184 GT:DS:GL:BD 0.19047619 0
1 2524915 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4337;AVGPOST=0.9970;RSQ=0.9954;ERATE=0.0005;THETA=0.0003;AC=948;AN=2184 GT:DS:GL:BD 0.43406594 0
1 2524943 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.4745;AVGPOST=0.9971;RSQ=0.9953;ERATE=0.0005;THETA=0.0003;AC=1039;AN=2184 GT:DS:GL:BD 0.47573259 0
1 2524966 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.4562;AVGPOST=0.9985;RSQ=0.9977;ERATE=0.0003;THETA=0.0006;AC=998;AN=2184 GT:DS:GL:BD 0.45695969 0
1 2525070 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0188;AVGPOST=0.9999;RSQ=0.9964;ERATE=0.0003;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 2525121 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2525152 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0134;AVGPOST=0.9997;RSQ=0.9911;ERATE=0.0003;THETA=0.0008;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2525164 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0224;AVGPOST=0.9999;RSQ=0.9982;ERATE=0.0003;THETA=0.0003;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 2525208 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0192;AVGPOST=0.9991;RSQ=0.9828;ERATE=0.0003;THETA=0.0005;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 2525272 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2525378 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2525386 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2525548 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.776;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4157;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2525660 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.4243;AVGPOST=0.9967;RSQ=0.9945;ERATE=0.0004;THETA=0.0004;AC=928;AN=2184 GT:DS:GL:BD 0.42490843 0
1 2525665 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.4751;AVGPOST=0.9962;RSQ=0.9942;ERATE=0.0006;THETA=0.0004;AC=1040;AN=2184 GT:DS:GL:BD 0.47619048 0
1 2525920 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.743;LDAF=0.0123;AVGPOST=0.9877;RSQ=0.6124;ERATE=0.0063;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2526008 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0060;AVGPOST=0.9995;RSQ=0.9655;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2526200 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2526250 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2526336 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.960;LDAF=0.0200;AVGPOST=0.9995;RSQ=0.9898;ERATE=0.0021;THETA=0.0007;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 2526445 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0184;AVGPOST=0.9998;RSQ=0.9943;ERATE=0.0003;THETA=0.0007;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 2526458 . TG T 1641 PASS INDEL;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0155;AVGPOST=0.9965;RSQ=0.9058;ERATE=0.0005;THETA=0.0006;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 2526523 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0049;AVGPOST=0.9995;RSQ=0.9608;ERATE=0.0003;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2526537 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0055;AVGPOST=0.9998;RSQ=0.9805;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2526571 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0836;AVGPOST=0.9995;RSQ=0.9973;ERATE=0.0003;THETA=0.0006;AC=183;AN=2184 GT:DS:GL:BD 0.08379121 0
1 2526621 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0134;AVGPOST=0.9997;RSQ=0.9894;ERATE=0.0003;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2526746 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4771;AVGPOST=0.9997;RSQ=0.9995;ERATE=0.0006;THETA=0.0003;AC=1043;AN=2184 GT:DS:GL:BD 0.47756410 0
1 2526936 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9824;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2527180 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0135;AVGPOST=0.9996;RSQ=0.9861;ERATE=0.0003;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2527256 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.871;LDAF=0.0029;AVGPOST=0.9987;RSQ=0.8208;ERATE=0.0003;THETA=0.0024;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2527257 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.846;LDAF=0.0047;AVGPOST=0.9976;RSQ=0.7737;ERATE=0.0009;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2527263 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.747;LDAF=0.0026;AVGPOST=0.9978;RSQ=0.6572;ERATE=0.0005;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2527412 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8149;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2527437 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2527457 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0041;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2527478 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2527517 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 2527678 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.5668;AVGPOST=0.9973;RSQ=0.9954;ERATE=0.0020;THETA=0.0003;AC=1238;AN=2184 GT:DS:GL:BD 0.56684983 1
1 2527694 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0134;AVGPOST=0.9997;RSQ=0.9894;ERATE=0.0003;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2527859 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7380;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2527901 . TG T 4682 PASS INDEL;BAVGPOST=0.984;BRSQ=0.852;LDAF=0.0568;AVGPOST=0.9924;RSQ=0.9474;ERATE=0.0005;THETA=0.0004;AC=122;AN=2184 GT:DS:GL:BD 0.05586081 0
1 2527972 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0016;AVGPOST=0.9988;RSQ=0.7062;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2528133 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5658;AVGPOST=0.9997;RSQ=0.9994;ERATE=0.0003;THETA=0.0006;AC=1235;AN=2184 GT:DS:GL:BD 0.56547618 1
1 2528294 . T TGCG 324 PASS INDEL;BAVGPOST=0.995;BRSQ=0.506;LDAF=0.0083;AVGPOST=0.9920;RSQ=0.6087;ERATE=0.0010;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2528297 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.805;LDAF=0.0044;AVGPOST=0.9974;RSQ=0.7584;ERATE=0.0014;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2528340 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.966;LDAF=0.0609;AVGPOST=0.9985;RSQ=0.9896;ERATE=0.0004;THETA=0.0005;AC=133;AN=2184 GT:DS:GL:BD 0.06089744 0
1 2528425 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5510;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2528465 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9047;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2528562 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.861;LDAF=0.0076;AVGPOST=0.9974;RSQ=0.8559;ERATE=0.0004;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2528571 . TC T 571 PASS INDEL;BAVGPOST=0.997;BRSQ=0.766;LDAF=0.0078;AVGPOST=0.9954;RSQ=0.7614;ERATE=0.0006;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2528679 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8483;ERATE=0.0004;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2528680 . C CT 77 PASS INDEL;BAVGPOST=1.000;BRSQ=0.719;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.3830;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2528682 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5616;AVGPOST=0.9985;RSQ=0.9975;ERATE=0.0006;THETA=0.0007;AC=1226;AN=2184 GT:DS:GL:BD 0.56135529 1
1 2528775 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0788;AVGPOST=0.9995;RSQ=0.9967;ERATE=0.0004;THETA=0.0003;AC=172;AN=2184 GT:DS:GL:BD 0.07875458 0
1 2528841 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.599;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.4175;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2528933 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.877;LDAF=0.0075;AVGPOST=0.9991;RSQ=0.9471;ERATE=0.0003;THETA=0.0008;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2528999 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5241;AVGPOST=0.9966;RSQ=0.9948;ERATE=0.0006;THETA=0.0008;AC=1145;AN=2184 GT:DS:GL:BD 0.52426738 1
1 2529097 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5241;AVGPOST=0.9962;RSQ=0.9939;ERATE=0.0009;THETA=0.0005;AC=1145;AN=2184 GT:DS:GL:BD 0.52426738 1
1 2529157 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.743;LDAF=0.0081;AVGPOST=0.9955;RSQ=0.7853;ERATE=0.0006;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2529158 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.5115;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2529192 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5612;AVGPOST=0.9984;RSQ=0.9972;ERATE=0.0005;THETA=0.0003;AC=1226;AN=2184 GT:DS:GL:BD 0.56135529 1
1 2529268 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.792;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.7995;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2529281 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0038;AVGPOST=0.9985;RSQ=0.8519;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2529283 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.869;LDAF=0.0143;AVGPOST=0.9977;RSQ=0.9267;ERATE=0.0006;THETA=0.0008;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 2529360 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5255;AVGPOST=0.9974;RSQ=0.9960;ERATE=0.0005;THETA=0.0006;AC=1146;AN=2184 GT:DS:GL:BD 0.52472526 1
1 2529437 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5244;AVGPOST=0.9990;RSQ=0.9987;ERATE=0.0003;THETA=0.0005;AC=1145;AN=2184 GT:DS:GL:BD 0.52426738 1
1 2529552 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0367;AVGPOST=0.9996;RSQ=0.9952;ERATE=0.0004;THETA=0.0004;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 2529855 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2529881 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7747;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2529922 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9885;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2530245 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9880;ERATE=0.0005;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2530295 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2530341 rs80303002 A AG 69748 PASS INDEL;BAVGPOST=0.984;BRSQ=0.969;LDAF=0.5661;AVGPOST=0.9937;RSQ=0.9897;ERATE=0.0012;THETA=0.0003;AC=1237;AN=2184 GT:DS:GL:BD 0.56639194 1
1 2530342 . G GT 22526 PASS INDEL;BAVGPOST=0.977;BRSQ=0.958;LDAF=0.5571;AVGPOST=0.9782;RSQ=0.9667;ERATE=0.0037;THETA=0.0009;AC=1224;AN=2184 GT:DS:GL:BD 0.56043959 1
1 2530411 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=0.9999;RSQ=0.9921;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2530474 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2530558 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5633;AVGPOST=0.9977;RSQ=0.9959;ERATE=0.0007;THETA=0.0004;AC=1229;AN=2184 GT:DS:GL:BD 0.56272894 1
1 2530578 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5943;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2530694 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5674;AVGPOST=0.9972;RSQ=0.9954;ERATE=0.0006;THETA=0.0007;AC=1238;AN=2184 GT:DS:GL:BD 0.56684983 1
1 2530743 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.832;LDAF=0.0024;AVGPOST=0.9985;RSQ=0.7829;ERATE=0.0006;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2530808 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0027;AVGPOST=0.9982;RSQ=0.7520;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2531003 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0019;AVGPOST=0.9978;RSQ=0.5397;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2531165 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.431;LDAF=0.0100;AVGPOST=0.9842;RSQ=0.4108;ERATE=0.0031;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2531211 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.649;LDAF=0.0077;AVGPOST=0.9961;RSQ=0.7779;ERATE=0.0008;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2531310 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.561;LDAF=0.0030;AVGPOST=0.9954;RSQ=0.3991;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2531372 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5638;AVGPOST=0.9985;RSQ=0.9974;ERATE=0.0005;THETA=0.0011;AC=1230;AN=2184 GT:DS:GL:BD 0.56318682 1
1 2531381 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6045;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2531404 . C CTTTT 1410 PASS INDEL;BAVGPOST=0.998;BRSQ=0.930;LDAF=0.0154;AVGPOST=0.9957;RSQ=0.8935;ERATE=0.0006;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 2531412 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.801;LDAF=0.0045;AVGPOST=0.9978;RSQ=0.8116;ERATE=0.0005;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2531467 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5635;AVGPOST=0.9961;RSQ=0.9942;ERATE=0.0006;THETA=0.0005;AC=1230;AN=2184 GT:DS:GL:BD 0.56318682 1
1 2531505 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.983;LDAF=0.5245;AVGPOST=0.9745;RSQ=0.9643;ERATE=0.0033;THETA=0.0002;AC=1144;AN=2184 GT:DS:GL:BD 0.52380955 1
1 2531514 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.985;LDAF=0.5615;AVGPOST=0.9948;RSQ=0.9910;ERATE=0.0008;THETA=0.0006;AC=1229;AN=2184 GT:DS:GL:BD 0.56272894 1
1 2531621 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.667;LDAF=0.0041;AVGPOST=0.9964;RSQ=0.6318;ERATE=0.0007;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2531673 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0023;AVGPOST=0.9980;RSQ=0.6345;ERATE=0.0006;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2531773 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8510;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2531973 . GGGA G 260 PASS INDEL;BAVGPOST=0.992;BRSQ=0.638;LDAF=0.0223;AVGPOST=0.9743;RSQ=0.5372;ERATE=0.0073;THETA=0.0010;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2532009 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.523;LDAF=0.0021;AVGPOST=0.9968;RSQ=0.3837;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2532046 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0177;AVGPOST=0.9980;RSQ=0.9522;ERATE=0.0004;THETA=0.0006;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 2532073 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.759;LDAF=0.0085;AVGPOST=0.9956;RSQ=0.8154;ERATE=0.0004;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 2532081 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.729;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4005;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2532159 . C CTGT 59413 PASS INDEL;BAVGPOST=0.966;BRSQ=0.941;LDAF=0.5573;AVGPOST=0.9867;RSQ=0.9796;ERATE=0.0008;THETA=0.0007;AC=1227;AN=2184 GT:DS:GL:BD 0.56181318 1
1 2532161 . G GTTT 33169 PASS INDEL;BAVGPOST=0.946;BRSQ=0.908;LDAF=0.5088;AVGPOST=0.8958;RSQ=0.8390;ERATE=0.0330;THETA=0.0004;AC=1133;AN=2184 GT:DS:GL:BD 0.51877290 1
1 2532330 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.504;LDAF=0.0021;AVGPOST=0.9982;RSQ=0.6618;ERATE=0.0004;THETA=0.0030;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2532416 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5648;AVGPOST=0.9982;RSQ=0.9968;ERATE=0.0005;THETA=0.0005;AC=1234;AN=2184 GT:DS:GL:BD 0.56501830 1
1 2532431 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0024;AVGPOST=0.9978;RSQ=0.6484;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2532453 rs34791736 C CT 56554 PASS INDEL;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5640;AVGPOST=0.9927;RSQ=0.9883;ERATE=0.0013;THETA=0.0015;AC=1232;AN=2184 GT:DS:GL:BD 0.56410259 1
1 2532479 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.617;LDAF=0.0025;AVGPOST=0.9983;RSQ=0.7534;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2532506 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5639;AVGPOST=0.9975;RSQ=0.9955;ERATE=0.0006;THETA=0.0006;AC=1232;AN=2184 GT:DS:GL:BD 0.56410259 1
1 2532517 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.695;LDAF=0.0024;AVGPOST=0.9971;RSQ=0.4725;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2532527 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0395;AVGPOST=0.9990;RSQ=0.9879;ERATE=0.0004;THETA=0.0011;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 2532565 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8702;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2532624 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5649;AVGPOST=0.9968;RSQ=0.9948;ERATE=0.0010;THETA=0.0012;AC=1232;AN=2184 GT:DS:GL:BD 0.56410259 1
1 2532652 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6591;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2532661 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.7041;ERATE=0.0004;THETA=0.0029;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2532730 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2532787 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0024;AVGPOST=0.9982;RSQ=0.7084;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2532847 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.669;LDAF=0.0006;AVGPOST=0.9988;RSQ=0.3195;ERATE=0.0004;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 2532851 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7402;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2532899 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5681;AVGPOST=0.9987;RSQ=0.9979;ERATE=0.0004;THETA=0.0004;AC=1240;AN=2184 GT:DS:GL:BD 0.56776559 1
1 2533108 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.831;LDAF=0.0115;AVGPOST=0.9972;RSQ=0.9048;ERATE=0.0004;THETA=0.0002;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 2533165 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0130;AVGPOST=0.9985;RSQ=0.9543;ERATE=0.0004;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 2533225 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2533250 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4331;AVGPOST=0.9989;RSQ=0.9981;ERATE=0.0005;THETA=0.0004;AC=947;AN=2184 GT:DS:GL:BD 0.43360806 0
1 2533311 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.868;LDAF=0.0039;AVGPOST=0.9987;RSQ=0.8600;ERATE=0.0005;THETA=0.0056;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2533337 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2533341 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.660;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.5348;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2533402 rs113131975 CAG C 6069 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0419;AVGPOST=0.9985;RSQ=0.9838;ERATE=0.0005;THETA=0.0007;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 2533550 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2533552 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4328;AVGPOST=0.9974;RSQ=0.9962;ERATE=0.0012;THETA=0.0004;AC=948;AN=2184 GT:DS:GL:BD 0.43406594 0
1 2533706 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4328;AVGPOST=0.9995;RSQ=0.9990;ERATE=0.0004;THETA=0.0005;AC=946;AN=2184 GT:DS:GL:BD 0.43315017 0
1 2533767 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.947;LDAF=0.0313;AVGPOST=0.9982;RSQ=0.9753;ERATE=0.0003;THETA=0.0007;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 2533792 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0057;AVGPOST=0.9986;RSQ=0.9115;ERATE=0.0006;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2534062 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0041;AVGPOST=0.9968;RSQ=0.7110;ERATE=0.0006;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2534087 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4210;AVGPOST=0.9981;RSQ=0.9967;ERATE=0.0005;THETA=0.0006;AC=919;AN=2184 GT:DS:GL:BD 0.42078754 0
1 2534122 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.898;LDAF=0.0268;AVGPOST=0.9965;RSQ=0.9434;ERATE=0.0004;THETA=0.0008;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 2534177 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0091;AVGPOST=0.9984;RSQ=0.9237;ERATE=0.0006;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 2534197 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0133;AVGPOST=0.9993;RSQ=0.9742;ERATE=0.0003;THETA=0.0007;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2534247 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0416;AVGPOST=0.9990;RSQ=0.9885;ERATE=0.0004;THETA=0.0002;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 2534338 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6140;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2534375 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0844;AVGPOST=0.9986;RSQ=0.9925;ERATE=0.0004;THETA=0.0004;AC=185;AN=2184 GT:DS:GL:BD 0.08470696 0
1 2534386 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.951;LDAF=0.0218;AVGPOST=0.9969;RSQ=0.9514;ERATE=0.0003;THETA=0.0006;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 2534387 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.950;LDAF=0.0225;AVGPOST=0.9965;RSQ=0.9443;ERATE=0.0003;THETA=0.0006;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 2534401 . CTTTG C 146 PASS INDEL;BAVGPOST=0.999;BRSQ=0.753;LDAF=0.0022;AVGPOST=0.9976;RSQ=0.5470;ERATE=0.0006;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2534472 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.672;LDAF=0.0059;AVGPOST=0.9947;RSQ=0.6752;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2534505 . GC G 111 PASS INDEL;BAVGPOST=1.000;BRSQ=0.776;LDAF=0.0017;AVGPOST=0.9974;RSQ=0.4005;ERATE=0.0007;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2534728 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0107;AVGPOST=0.9984;RSQ=0.9365;ERATE=0.0005;THETA=0.0014;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 2534801 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4315;AVGPOST=0.9932;RSQ=0.9887;ERATE=0.0012;THETA=0.0004;AC=942;AN=2184 GT:DS:GL:BD 0.43131867 0
1 2534933 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.737;LDAF=0.0055;AVGPOST=0.9986;RSQ=0.8686;ERATE=0.0004;THETA=0.0031;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2534952 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.668;LDAF=0.0088;AVGPOST=0.9939;RSQ=0.7471;ERATE=0.0004;THETA=0.0018;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2534978 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.4210;AVGPOST=0.9989;RSQ=0.9978;ERATE=0.0005;THETA=0.0004;AC=920;AN=2184 GT:DS:GL:BD 0.42124543 0
1 2535092 rs35090174 ACT A 33664 PASS INDEL;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.4207;AVGPOST=0.9830;RSQ=0.9727;ERATE=0.0032;THETA=0.0004;AC=918;AN=2184 GT:DS:GL:BD 0.42032966 0
1 2535149 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2535201 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2535202 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0061;AVGPOST=0.9998;RSQ=0.9826;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2535275 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0124;AVGPOST=1.0000;RSQ=0.9984;ERATE=0.0003;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 2535282 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2535287 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9667;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2535397 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8893;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2535440 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9902;ERATE=0.0003;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2535496 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0375;AVGPOST=0.9969;RSQ=0.9705;ERATE=0.0004;THETA=0.0004;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 2535569 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.929;LDAF=0.0202;AVGPOST=0.9988;RSQ=0.9746;ERATE=0.0004;THETA=0.0004;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 2535613 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4333;AVGPOST=0.9998;RSQ=0.9996;ERATE=0.0003;THETA=0.0003;AC=947;AN=2184 GT:DS:GL:BD 0.43360806 0
1 2535632 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=0.9999;RSQ=0.9920;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2535758 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.979;LDAF=0.4646;AVGPOST=0.9832;RSQ=0.9746;ERATE=0.0055;THETA=0.0002;AC=1023;AN=2184 GT:DS:GL:BD 0.46840659 0
1 2535812 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7937;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2535884 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0081;AVGPOST=0.9985;RSQ=0.9377;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2535895 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4314;AVGPOST=0.9971;RSQ=0.9951;ERATE=0.0008;THETA=0.0018;AC=944;AN=2184 GT:DS:GL:BD 0.43223444 0
1 2535921 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0104;AVGPOST=0.9992;RSQ=0.9674;ERATE=0.0005;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 2535971 . A AT 67 PASS INDEL;BAVGPOST=0.997;BRSQ=0.623;LDAF=0.0047;AVGPOST=0.9947;RSQ=0.5424;ERATE=0.0007;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2536002 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4325;AVGPOST=0.9983;RSQ=0.9970;ERATE=0.0004;THETA=0.0005;AC=945;AN=2184 GT:DS:GL:BD 0.43269232 0
1 2536014 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5439;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2536485 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7764;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2536543 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.744;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6219;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2536644 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.477;LDAF=0.0013;AVGPOST=0.9975;RSQ=0.2656;ERATE=0.0005;THETA=0.0009;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 2536679 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.789;LDAF=0.0036;AVGPOST=0.9961;RSQ=0.5600;ERATE=0.0012;THETA=0.0024;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2536714 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9490;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2536742 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.680;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.4802;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2536813 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0789;AVGPOST=0.9989;RSQ=0.9941;ERATE=0.0003;THETA=0.0004;AC=172;AN=2184 GT:DS:GL:BD 0.07875458 0
1 2536845 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0121;AVGPOST=0.9996;RSQ=0.9865;ERATE=0.0003;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 2536898 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0037;AVGPOST=0.9997;RSQ=0.9656;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2537072 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0255;AVGPOST=0.9996;RSQ=0.9931;ERATE=0.0003;THETA=0.0006;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 2537095 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4452;AVGPOST=0.9993;RSQ=0.9988;ERATE=0.0019;THETA=0.0015;AC=973;AN=2184 GT:DS:GL:BD 0.44551283 0
1 2537166 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0172;AVGPOST=0.9993;RSQ=0.9804;ERATE=0.0005;THETA=0.0004;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 2537229 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.975;LDAF=0.0412;AVGPOST=0.9917;RSQ=0.9187;ERATE=0.0020;THETA=0.0003;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 2537236 . TG T 12 PASS INDEL;BAVGPOST=0.996;BRSQ=0.196;LDAF=0.0155;AVGPOST=0.9807;RSQ=0.5491;ERATE=0.0009;THETA=0.0002;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 2537413 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0093;AVGPOST=0.9950;RSQ=0.7750;ERATE=0.0008;THETA=0.0080;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2537448 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.821;LDAF=0.0062;AVGPOST=0.9972;RSQ=0.8157;ERATE=0.0005;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2537464 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4757;AVGPOST=0.9980;RSQ=0.9969;ERATE=0.0004;THETA=0.0004;AC=1041;AN=2184 GT:DS:GL:BD 0.47664836 0
1 2537801 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0174;AVGPOST=0.9999;RSQ=0.9974;ERATE=0.0004;THETA=0.0002;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 2537838 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.4170;AVGPOST=0.9995;RSQ=0.9991;ERATE=0.0003;THETA=0.0004;AC=911;AN=2184 GT:DS:GL:BD 0.41712454 0
1 2538061 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0017;AVGPOST=0.9987;RSQ=0.6639;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2538209 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.4168;AVGPOST=0.9992;RSQ=0.9985;ERATE=0.0005;THETA=0.0004;AC=911;AN=2184 GT:DS:GL:BD 0.41712454 0
1 2538344 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0495;AVGPOST=0.9995;RSQ=0.9955;ERATE=0.0003;THETA=0.0004;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 2538349 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.980;LDAF=0.4100;AVGPOST=0.9919;RSQ=0.9867;ERATE=0.0038;THETA=0.0004;AC=901;AN=2184 GT:DS:GL:BD 0.41254580 0
1 2538444 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0101;AVGPOST=0.9999;RSQ=0.9956;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 2538520 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0036;AVGPOST=1.0000;RSQ=0.9940;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2538521 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2538604 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0060;AVGPOST=1.0000;RSQ=0.9963;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2538706 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.894;LDAF=0.0084;AVGPOST=0.9995;RSQ=0.9716;ERATE=0.0004;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2538738 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0752;AVGPOST=0.9985;RSQ=0.9916;ERATE=0.0004;THETA=0.0007;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 2538809 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.7068;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2538826 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.855;LDAF=0.0063;AVGPOST=0.9974;RSQ=0.8148;ERATE=0.0005;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2538886 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4161;AVGPOST=0.9963;RSQ=0.9932;ERATE=0.0012;THETA=0.0004;AC=910;AN=2184 GT:DS:GL:BD 0.41666666 0
1 2538958 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.729;LDAF=0.0100;AVGPOST=0.9920;RSQ=0.6986;ERATE=0.0006;THETA=0.0010;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2539006 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4669;AVGPOST=0.9966;RSQ=0.9953;ERATE=0.0006;THETA=0.0004;AC=1018;AN=2184 GT:DS:GL:BD 0.46611720 0
1 2539037 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0076;AVGPOST=0.9989;RSQ=0.9422;ERATE=0.0004;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2539181 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4657;AVGPOST=0.9975;RSQ=0.9957;ERATE=0.0007;THETA=0.0005;AC=1018;AN=2184 GT:DS:GL:BD 0.46611720 0
1 2539229 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0144;AVGPOST=0.9962;RSQ=0.8902;ERATE=0.0007;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 2539400 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.987;LDAF=0.4351;AVGPOST=0.9684;RSQ=0.9504;ERATE=0.0054;THETA=0.0005;AC=950;AN=2184 GT:DS:GL:BD 0.43498167 0
1 2539414 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0046;AVGPOST=0.9982;RSQ=0.8431;ERATE=0.0004;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2539532 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.4644;AVGPOST=0.9947;RSQ=0.9924;ERATE=0.0005;THETA=0.0006;AC=1018;AN=2184 GT:DS:GL:BD 0.46611720 0
1 2539555 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.4620;AVGPOST=0.9917;RSQ=0.9866;ERATE=0.0017;THETA=0.0007;AC=1011;AN=2184 GT:DS:GL:BD 0.46291208 0
1 2539590 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.4702;AVGPOST=0.9969;RSQ=0.9953;ERATE=0.0004;THETA=0.0004;AC=1028;AN=2184 GT:DS:GL:BD 0.47069597 0
1 2539603 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.4187;AVGPOST=0.9961;RSQ=0.9929;ERATE=0.0010;THETA=0.0004;AC=914;AN=2184 GT:DS:GL:BD 0.41849816 0
1 2539659 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0133;AVGPOST=0.9987;RSQ=0.9571;ERATE=0.0006;THETA=0.0006;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 2539674 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0147;AVGPOST=0.9977;RSQ=0.9382;ERATE=0.0005;THETA=0.0006;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 2539796 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.4211;AVGPOST=0.9979;RSQ=0.9966;ERATE=0.0003;THETA=0.0006;AC=920;AN=2184 GT:DS:GL:BD 0.42124543 0
1 2539813 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.763;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6226;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2539852 . G GC 32 PASS INDEL;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4507;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2539901 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4653;AVGPOST=0.9980;RSQ=0.9967;ERATE=0.0005;THETA=0.0004;AC=1017;AN=2184 GT:DS:GL:BD 0.46565935 0
1 2539946 . CAT C 57304 PASS INDEL;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4234;AVGPOST=0.9976;RSQ=0.9962;ERATE=0.0007;THETA=0.0005;AC=926;AN=2184 GT:DS:GL:BD 0.42399266 0
1 2540102 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2540228 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9221;ERATE=0.0003;THETA=0.0031;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2540229 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0047;AVGPOST=0.9983;RSQ=0.8637;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2540238 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8628;ERATE=0.0004;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2540244 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7999;ERATE=0.0006;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2540262 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4708;AVGPOST=0.9984;RSQ=0.9973;ERATE=0.0005;THETA=0.0005;AC=1030;AN=2184 GT:DS:GL:BD 0.47161171 0
1 2540277 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6228;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2540299 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6781;ERATE=0.0007;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2540364 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4736;AVGPOST=0.9964;RSQ=0.9946;ERATE=0.0006;THETA=0.0002;AC=1037;AN=2184 GT:DS:GL:BD 0.47481686 0
1 2540391 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8228;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2540594 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0084;AVGPOST=0.9997;RSQ=0.9817;ERATE=0.0004;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2540881 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9524;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2541056 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0032;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2541133 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9830;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2541143 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2541189 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8839;ERATE=0.0007;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2541237 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7882;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2541269 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4662;AVGPOST=1.0000;RSQ=0.9999;ERATE=0.0004;THETA=0.0006;AC=1019;AN=2184 GT:DS:GL:BD 0.46657509 0
1 2541303 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2541367 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6870;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2541512 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6602;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2541556 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.764;LDAF=0.0071;AVGPOST=0.9973;RSQ=0.8488;ERATE=0.0003;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2541648 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0037;AVGPOST=0.9990;RSQ=0.8837;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2541688 . GC G 160 PASS INDEL;BAVGPOST=0.998;BRSQ=0.777;LDAF=0.0072;AVGPOST=0.9956;RSQ=0.7758;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2541727 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0377;AVGPOST=0.9973;RSQ=0.9715;ERATE=0.0004;THETA=0.0008;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 2541730 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.5063;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2541804 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9490;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2541808 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.718;LDAF=0.0021;AVGPOST=0.9976;RSQ=0.5729;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2541875 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0016;AVGPOST=0.9981;RSQ=0.4927;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2541914 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0033;AVGPOST=0.9973;RSQ=0.6868;ERATE=0.0006;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2541972 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2542163 . A AC 1120 PASS INDEL;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0235;AVGPOST=0.9947;RSQ=0.9104;ERATE=0.0006;THETA=0.0005;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 2542169 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.724;LDAF=0.0017;AVGPOST=0.9974;RSQ=0.3190;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2542180 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0060;AVGPOST=0.9964;RSQ=0.7962;ERATE=0.0006;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2542375 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0085;AVGPOST=0.9989;RSQ=0.9480;ERATE=0.0003;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2542499 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.752;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8511;ERATE=0.0004;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2542562 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.718;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5905;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2542653 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.984;LDAF=0.4691;AVGPOST=0.9948;RSQ=0.9918;ERATE=0.0013;THETA=0.0004;AC=1026;AN=2184 GT:DS:GL:BD 0.46978021 0
1 2542896 . G GT 21 PASS INDEL;BAVGPOST=0.996;BRSQ=0.483;LDAF=0.0120;AVGPOST=0.9798;RSQ=0.3055;ERATE=0.0025;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2542979 . G GGGGGT 211 PASS INDEL;BAVGPOST=0.997;BRSQ=0.742;LDAF=0.0072;AVGPOST=0.9960;RSQ=0.7483;ERATE=0.0007;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2543301 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0076;AVGPOST=0.9989;RSQ=0.9348;ERATE=0.0006;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2543511 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9293;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2543521 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9420;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2543664 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2543791 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9413;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2543803 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2543835 . CTG C 166 PASS INDEL;BAVGPOST=1.000;BRSQ=0.703;LDAF=0.0020;AVGPOST=0.9984;RSQ=0.6148;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2543847 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9666;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2543875 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0131;AVGPOST=0.9994;RSQ=0.9781;ERATE=0.0004;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 2544068 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2544232 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.786;LDAF=0.0080;AVGPOST=0.9972;RSQ=0.8441;ERATE=0.0003;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 2544288 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0015;AVGPOST=0.9983;RSQ=0.5722;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2544479 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0024;AVGPOST=0.9982;RSQ=0.7009;ERATE=0.0003;THETA=0.0029;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2544490 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0024;AVGPOST=0.9978;RSQ=0.6686;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2544612 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9364;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2544639 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.834;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9358;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2544640 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.4169;AVGPOST=0.9968;RSQ=0.9945;ERATE=0.0006;THETA=0.0007;AC=911;AN=2184 GT:DS:GL:BD 0.41712454 0
1 2544647 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0022;AVGPOST=0.9991;RSQ=0.8145;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2544824 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8024;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2544891 . GC G 582 PASS INDEL;BAVGPOST=0.999;BRSQ=0.807;LDAF=0.0039;AVGPOST=0.9985;RSQ=0.8106;ERATE=0.0006;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2544951 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8033;ERATE=0.0006;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2545006 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9782;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2545088 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.896;LDAF=0.0134;AVGPOST=0.9974;RSQ=0.9369;ERATE=0.0003;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 2545142 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.692;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5438;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2545269 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0369;AVGPOST=0.9993;RSQ=0.9917;ERATE=0.0005;THETA=0.0006;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 2545468 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=0.9998;RSQ=0.9628;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2545488 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0022;AVGPOST=0.9994;RSQ=0.9086;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2545515 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6553;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2545526 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.873;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.8128;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2545654 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0033;AVGPOST=0.9993;RSQ=0.9021;ERATE=0.0004;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2545655 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7359;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2545785 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0032;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2545833 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0386;AVGPOST=0.9996;RSQ=0.9966;ERATE=0.0003;THETA=0.0008;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 2545848 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6817;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2546089 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0040;AVGPOST=0.9992;RSQ=0.9259;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2546229 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4179;AVGPOST=0.9948;RSQ=0.9910;ERATE=0.0010;THETA=0.0008;AC=912;AN=2184 GT:DS:GL:BD 0.41758242 0
1 2546291 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0144;AVGPOST=0.9985;RSQ=0.9539;ERATE=0.0004;THETA=0.0012;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 2546343 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0036;AVGPOST=0.9997;RSQ=0.9617;ERATE=0.0003;THETA=0.0011;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2546356 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2546377 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8558;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2546390 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.4788;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2546446 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7388;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2546478 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0096;AVGPOST=0.9997;RSQ=0.9874;ERATE=0.0003;THETA=0.0008;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 2546593 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.937;LDAF=0.0340;AVGPOST=0.9958;RSQ=0.9539;ERATE=0.0004;THETA=0.0006;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 2546761 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6262;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2546778 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7502;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2546808 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0094;AVGPOST=0.9995;RSQ=0.9774;ERATE=0.0004;THETA=0.0007;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2547023 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2547124 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5466;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2547211 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.934;LDAF=0.0118;AVGPOST=0.9988;RSQ=0.9524;ERATE=0.0005;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 2547277 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.854;LDAF=0.0038;AVGPOST=0.9981;RSQ=0.7973;ERATE=0.0005;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2547294 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0055;AVGPOST=0.9998;RSQ=0.9840;ERATE=0.0003;THETA=0.0009;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2547336 . T TA 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5793;ERATE=0.0004;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2547467 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.929;LDAF=0.0259;AVGPOST=0.9973;RSQ=0.9567;ERATE=0.0003;THETA=0.0008;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 2547560 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0071;AVGPOST=0.9979;RSQ=0.8889;ERATE=0.0004;THETA=0.0012;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2547587 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2547609 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0130;AVGPOST=0.9996;RSQ=0.9864;ERATE=0.0004;THETA=0.0006;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 2547681 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0016;AVGPOST=0.9975;RSQ=0.3218;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2547710 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0041;AVGPOST=0.9994;RSQ=0.9366;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2547805 . C CA 115 PASS INDEL;BAVGPOST=0.997;BRSQ=0.501;LDAF=0.0068;AVGPOST=0.9958;RSQ=0.7554;ERATE=0.0006;THETA=0.0008;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2547849 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0129;AVGPOST=0.9996;RSQ=0.9862;ERATE=0.0003;THETA=0.0038;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 2547952 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.775;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6288;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2547961 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0050;AVGPOST=0.9990;RSQ=0.9164;ERATE=0.0004;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2548028 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.850;LDAF=0.9934;AVGPOST=0.9985;RSQ=0.9184;ERATE=0.0004;THETA=0.0005;AC=2170;AN=2184 GT:DS:GL:BD 0.99358976 1
1 2548057 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6409;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2548241 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0054;AVGPOST=0.9992;RSQ=0.9314;ERATE=0.0004;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2548288 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5903;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2548313 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0027;AVGPOST=0.9993;RSQ=0.9012;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2548349 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0049;AVGPOST=0.9992;RSQ=0.9367;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2548383 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.844;LDAF=0.0032;AVGPOST=0.9979;RSQ=0.7407;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2548444 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2548449 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7117;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2548466 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0020;AVGPOST=0.9985;RSQ=0.6813;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2548547 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0046;AVGPOST=0.9980;RSQ=0.8297;ERATE=0.0004;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2548582 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.3967;ERATE=0.0007;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2548667 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.454;LDAF=0.0100;AVGPOST=0.9880;RSQ=0.5524;ERATE=0.0012;THETA=0.0014;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2548682 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0059;AVGPOST=0.9969;RSQ=0.7686;ERATE=0.0007;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2548783 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.356;LDAF=0.0304;AVGPOST=0.9620;RSQ=0.5141;ERATE=0.0006;THETA=0.0007;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 2548852 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.711;BRSQ=0.462;LDAF=0.3167;AVGPOST=0.7506;RSQ=0.5660;ERATE=0.0273;THETA=0.0010;AC=598;AN=2184 GT:DS:GL:BD 0.27380952 0
1 2548865 rs59497482 C CA 45 PASS INDEL;BAVGPOST=0.586;BRSQ=0.054;LDAF=0.2460;AVGPOST=0.6935;RSQ=0.3131;ERATE=0.0207;THETA=0.0005;AC=311;AN=2184 GT:DS:GL:BD 0.14239927 0
1 2548900 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0181;AVGPOST=0.9975;RSQ=0.9459;ERATE=0.0004;THETA=0.0005;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 2549089 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0363;AVGPOST=0.9996;RSQ=0.9955;ERATE=0.0003;THETA=0.0006;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 2549113 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0019;AVGPOST=0.9985;RSQ=0.7053;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2549149 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0367;AVGPOST=0.9988;RSQ=0.9860;ERATE=0.0004;THETA=0.0004;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 2549153 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.721;LDAF=0.0079;AVGPOST=0.9973;RSQ=0.8578;ERATE=0.0005;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 2549173 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5760;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2549194 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6818;ERATE=0.0003;THETA=0.0037;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2549241 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0059;AVGPOST=0.9992;RSQ=0.9486;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2549602 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9607;ERATE=0.0004;THETA=0.0012;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2549845 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6889;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2549855 . CA C 115 PASS INDEL;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5794;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2549937 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2550108 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2550181 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5492;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2550339 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0004;AVGPOST=0.9994;RSQ=0.4378;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2550343 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0018;AVGPOST=0.9999;RSQ=0.9756;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2550377 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5514;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2550411 . CA C 63 PASS INDEL;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0017;AVGPOST=0.9976;RSQ=0.4880;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2550586 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6622;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2550587 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.850;LDAF=0.0026;AVGPOST=0.9987;RSQ=0.8029;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2550636 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2550720 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5932;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2550729 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2550791 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5020;ERATE=0.0004;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2550942 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.873;LDAF=0.0080;AVGPOST=0.9981;RSQ=0.8936;ERATE=0.0005;THETA=0.0011;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2550965 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0348;AVGPOST=0.9988;RSQ=0.9886;ERATE=0.0004;THETA=0.0007;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 2551036 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.793;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8175;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2551052 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0024;AVGPOST=0.9966;RSQ=0.4667;ERATE=0.0005;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2551053 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4707;AVGPOST=0.9963;RSQ=0.9939;ERATE=0.0006;THETA=0.0007;AC=1031;AN=2184 GT:DS:GL:BD 0.47206959 0
1 2551168 . T TA 18 PASS INDEL;BAVGPOST=0.999;BRSQ=0.694;LDAF=0.0016;AVGPOST=0.9983;RSQ=0.6076;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2551189 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0048;AVGPOST=0.9972;RSQ=0.7733;ERATE=0.0004;THETA=0.0011;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2551453 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5469;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2551498 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.6162;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2551660 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4151;AVGPOST=0.9968;RSQ=0.9949;ERATE=0.0006;THETA=0.0023;AC=908;AN=2184 GT:DS:GL:BD 0.41575092 0
1 2551785 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.1448;AVGPOST=0.9960;RSQ=0.9882;ERATE=0.0004;THETA=0.0004;AC=314;AN=2184 GT:DS:GL:BD 0.14377290 0
1 2551834 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.7076;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2551900 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.979;LDAF=0.2475;AVGPOST=0.9935;RSQ=0.9857;ERATE=0.0006;THETA=0.0003;AC=538;AN=2184 GT:DS:GL:BD 0.24633700 0
1 2551952 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0021;AVGPOST=0.9990;RSQ=0.8577;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2552059 . T TG 6 PASS INDEL;BAVGPOST=0.999;BRSQ=0.679;LDAF=0.0028;AVGPOST=0.9973;RSQ=0.6194;ERATE=0.0006;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2552071 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4719;AVGPOST=0.9987;RSQ=0.9978;ERATE=0.0006;THETA=0.0003;AC=1031;AN=2184 GT:DS:GL:BD 0.47206959 0
1 2552103 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0024;AVGPOST=0.9980;RSQ=0.6464;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2552290 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7307;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2552422 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5018;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2552598 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.7725;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2552669 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.616;LDAF=0.0027;AVGPOST=0.9981;RSQ=0.7261;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2552733 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0020;AVGPOST=0.9992;RSQ=0.8835;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2552779 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.6208;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2552822 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0097;AVGPOST=0.9989;RSQ=0.9562;ERATE=0.0005;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2552831 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0132;AVGPOST=0.9991;RSQ=0.9698;ERATE=0.0004;THETA=0.0006;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 2552978 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7189;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2553022 . T TG 158 PASS INDEL;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7612;ERATE=0.0007;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2553083 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.4710;AVGPOST=0.9879;RSQ=0.9811;ERATE=0.0026;THETA=0.0002;AC=1029;AN=2184 GT:DS:GL:BD 0.47115386 0
1 2553091 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.659;LDAF=0.0083;AVGPOST=0.9946;RSQ=0.7447;ERATE=0.0007;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2553150 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0038;AVGPOST=0.9976;RSQ=0.7817;ERATE=0.0003;THETA=0.0024;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2553233 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5519;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2553251 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.776;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2553261 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.816;LDAF=0.0028;AVGPOST=0.9985;RSQ=0.7607;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2553382 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0200;AVGPOST=0.9992;RSQ=0.9828;ERATE=0.0004;THETA=0.0004;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 2553383 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.770;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8170;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2553492 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8448;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2553494 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0082;AVGPOST=0.9997;RSQ=0.9821;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2553542 rs74731535 TAGG T 46771 PASS INDEL;BAVGPOST=0.967;BRSQ=0.953;LDAF=0.4587;AVGPOST=0.9905;RSQ=0.9853;ERATE=0.0007;THETA=0.0003;AC=1008;AN=2184 GT:DS:GL:BD 0.46153846 0
1 2553546 rs72502767 AG A 2678 PASS INDEL;BAVGPOST=0.886;BRSQ=0.800;LDAF=0.3523;AVGPOST=0.8558;RSQ=0.7976;ERATE=0.0226;THETA=0.0006;AC=787;AN=2184 GT:DS:GL:BD 0.36034799 0
1 2553624 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4308;AVGPOST=0.9986;RSQ=0.9975;ERATE=0.0005;THETA=0.0003;AC=942;AN=2184 GT:DS:GL:BD 0.43131867 0
1 2553644 . T TC 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.4099;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2553657 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.953;LDAF=0.0313;AVGPOST=0.9979;RSQ=0.9732;ERATE=0.0003;THETA=0.0003;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 2553751 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0129;AVGPOST=0.9998;RSQ=0.9931;ERATE=0.0003;THETA=0.0012;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 2553758 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4729;AVGPOST=0.9971;RSQ=0.9957;ERATE=0.0005;THETA=0.0003;AC=1032;AN=2184 GT:DS:GL:BD 0.47252747 0
1 2554010 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.835;LDAF=0.0057;AVGPOST=0.9993;RSQ=0.9571;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2554045 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.874;LDAF=0.0144;AVGPOST=0.9975;RSQ=0.9337;ERATE=0.0004;THETA=0.0009;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2554051 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.765;LDAF=0.0025;AVGPOST=0.9978;RSQ=0.6912;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2554120 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.889;LDAF=0.0505;AVGPOST=0.9951;RSQ=0.9595;ERATE=0.0003;THETA=0.0003;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 2554186 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9734;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2554254 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.676;LDAF=0.0071;AVGPOST=0.9976;RSQ=0.8592;ERATE=0.0005;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2554343 . GT G 654 PASS INDEL;BAVGPOST=0.756;BRSQ=0.482;LDAF=0.2330;AVGPOST=0.7935;RSQ=0.5971;ERATE=0.0176;THETA=0.0002;AC=440;AN=2184 GT:DS:GL:BD 0.20146520 0
1 2554344 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.961;LDAF=0.4402;AVGPOST=0.9479;RSQ=0.9215;ERATE=0.0079;THETA=0.0004;AC=968;AN=2184 GT:DS:GL:BD 0.44322345 0
1 2554563 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.973;LDAF=0.4200;AVGPOST=0.9739;RSQ=0.9579;ERATE=0.0036;THETA=0.0004;AC=919;AN=2184 GT:DS:GL:BD 0.42078754 0
1 2554632 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.755;LDAF=0.0015;AVGPOST=0.9981;RSQ=0.5636;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2554714 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9843;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2554753 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7010;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2554786 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5258;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2554789 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9863;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2554825 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0023;AVGPOST=0.9963;RSQ=0.4031;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2555129 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0756;AVGPOST=0.9975;RSQ=0.9853;ERATE=0.0003;THETA=0.0002;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 2555464 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0062;AVGPOST=0.9991;RSQ=0.9383;ERATE=0.0004;THETA=0.0035;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2555480 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0029;AVGPOST=0.9990;RSQ=0.8484;ERATE=0.0005;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2555512 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0017;AVGPOST=0.9980;RSQ=0.5593;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2555572 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5104;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2555640 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4395;AVGPOST=0.9978;RSQ=0.9961;ERATE=0.0008;THETA=0.0004;AC=960;AN=2184 GT:DS:GL:BD 0.43956044 0
1 2555670 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6208;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2555711 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.853;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9017;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2555756 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.916;LDAF=0.0098;AVGPOST=0.9991;RSQ=0.9575;ERATE=0.0004;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 2555763 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8615;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2555776 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.939;LDAF=0.0167;AVGPOST=0.9991;RSQ=0.9757;ERATE=0.0003;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 2555810 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0081;AVGPOST=0.9993;RSQ=0.9643;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2556011 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9865;ERATE=0.0003;THETA=0.0016;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2556125 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4169;AVGPOST=0.9987;RSQ=0.9977;ERATE=0.0005;THETA=0.0029;AC=911;AN=2184 GT:DS:GL:BD 0.41712454 0
1 2556286 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0080;AVGPOST=0.9994;RSQ=0.9625;ERATE=0.0004;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2556346 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0177;AVGPOST=0.9992;RSQ=0.9839;ERATE=0.0003;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 2556382 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.8234;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2556387 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0059;AVGPOST=0.9991;RSQ=0.9358;ERATE=0.0003;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2556416 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7457;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2556418 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.859;LDAF=0.0063;AVGPOST=0.9983;RSQ=0.8752;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2556529 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0130;AVGPOST=0.9995;RSQ=0.9803;ERATE=0.0004;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 2556548 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4274;AVGPOST=0.9943;RSQ=0.9912;ERATE=0.0009;THETA=0.0006;AC=932;AN=2184 GT:DS:GL:BD 0.42673993 0
1 2556694 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.0030;AVGPOST=0.9976;RSQ=0.7315;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2556709 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4259;AVGPOST=0.9969;RSQ=0.9950;ERATE=0.0009;THETA=0.0004;AC=930;AN=2184 GT:DS:GL:BD 0.42582417 0
1 2556753 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7303;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2556766 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0059;AVGPOST=0.9989;RSQ=0.9194;ERATE=0.0004;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2556767 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0056;AVGPOST=0.9994;RSQ=0.9478;ERATE=0.0004;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2556908 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.889;LDAF=0.0045;AVGPOST=0.9983;RSQ=0.8456;ERATE=0.0004;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2556987 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.813;LDAF=0.0133;AVGPOST=0.9943;RSQ=0.8420;ERATE=0.0005;THETA=0.0037;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 2557010 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.6079;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2557191 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5737;AVGPOST=0.9978;RSQ=0.9958;ERATE=0.0008;THETA=0.0003;AC=1252;AN=2184 GT:DS:GL:BD 0.57326007 1
1 2557262 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9019;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2557276 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.870;LDAF=0.0032;AVGPOST=0.9987;RSQ=0.8353;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2557311 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9730;ERATE=0.0004;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2557376 rs112944993 G GGAA 83358 PASS INDEL;BAVGPOST=0.989;BRSQ=0.979;LDAF=0.5131;AVGPOST=0.9636;RSQ=0.9474;ERATE=0.0102;THETA=0.0006;AC=1123;AN=2184 GT:DS:GL:BD 0.51419413 1
1 2557531 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5733;AVGPOST=0.9967;RSQ=0.9940;ERATE=0.0008;THETA=0.0003;AC=1253;AN=2184 GT:DS:GL:BD 0.57371795 1
1 2557616 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0024;AVGPOST=0.9982;RSQ=0.7365;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2557640 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8962;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2557922 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2558047 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.821;LDAF=0.0055;AVGPOST=0.9957;RSQ=0.7392;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2558084 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0027;AVGPOST=0.9976;RSQ=0.6819;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2558165 . A AT 642 PASS INDEL;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0044;AVGPOST=0.9979;RSQ=0.8360;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2558209 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0131;AVGPOST=0.9995;RSQ=0.9799;ERATE=0.0004;THETA=0.0008;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 2558210 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0063;AVGPOST=0.9991;RSQ=0.9439;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2558308 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5738;AVGPOST=0.9952;RSQ=0.9923;ERATE=0.0019;THETA=0.0004;AC=1254;AN=2184 GT:DS:GL:BD 0.57417583 1
1 2558471 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8840;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2558509 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0021;AVGPOST=0.9982;RSQ=0.6507;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2558523 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5742;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2558617 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0075;AVGPOST=0.9991;RSQ=0.9502;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2558618 . T TTC 852 PASS INDEL;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0074;AVGPOST=0.9993;RSQ=0.9586;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2558694 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0058;AVGPOST=0.9989;RSQ=0.9272;ERATE=0.0004;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2558695 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9273;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2558696 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8940;ERATE=0.0005;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2558740 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5766;AVGPOST=0.9989;RSQ=0.9980;ERATE=0.0003;THETA=0.0007;AC=1259;AN=2184 GT:DS:GL:BD 0.57646519 1
1 2558883 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0130;AVGPOST=0.9996;RSQ=0.9851;ERATE=0.0003;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 2558885 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.732;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.6218;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2559186 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0042;AVGPOST=0.9957;RSQ=0.6416;ERATE=0.0005;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2559243 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0037;AVGPOST=0.9997;RSQ=0.9589;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2559423 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0034;AVGPOST=0.9997;RSQ=0.9545;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2559503 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0139;AVGPOST=0.9987;RSQ=0.9602;ERATE=0.0003;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 2559550 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.605;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4545;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2559589 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.5794;AVGPOST=0.9856;RSQ=0.9777;ERATE=0.0029;THETA=0.0005;AC=1263;AN=2184 GT:DS:GL:BD 0.57829672 1
1 2559606 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9421;ERATE=0.0004;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2559734 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.686;LDAF=0.0184;AVGPOST=0.9873;RSQ=0.7187;ERATE=0.0013;THETA=0.0006;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 2559738 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0038;AVGPOST=0.9988;RSQ=0.8513;ERATE=0.0007;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2559900 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0058;AVGPOST=0.9989;RSQ=0.9166;ERATE=0.0004;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2559916 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.579;LDAF=0.0049;AVGPOST=0.9943;RSQ=0.5432;ERATE=0.0012;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2559939 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.560;LDAF=0.0022;AVGPOST=0.9976;RSQ=0.5273;ERATE=0.0008;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2559987 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.933;LDAF=0.0212;AVGPOST=0.9916;RSQ=0.8543;ERATE=0.0007;THETA=0.0021;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 2560009 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.583;LDAF=0.0028;AVGPOST=0.9957;RSQ=0.4237;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2560354 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.777;LDAF=0.0366;AVGPOST=0.9686;RSQ=0.6603;ERATE=0.0015;THETA=0.0005;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 2560615 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0185;AVGPOST=0.9822;RSQ=0.6290;ERATE=0.0015;THETA=0.0006;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 2560735 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.5735;AVGPOST=0.9781;RSQ=0.9646;ERATE=0.0033;THETA=0.0006;AC=1261;AN=2184 GT:DS:GL:BD 0.57738096 1
1 2560882 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5248;AVGPOST=0.9971;RSQ=0.9951;ERATE=0.0007;THETA=0.0004;AC=1145;AN=2184 GT:DS:GL:BD 0.52426738 1
1 2560903 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5747;AVGPOST=0.9982;RSQ=0.9967;ERATE=0.0004;THETA=0.0012;AC=1254;AN=2184 GT:DS:GL:BD 0.57417583 1
1 2560939 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.832;LDAF=0.0091;AVGPOST=0.9963;RSQ=0.8531;ERATE=0.0005;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2561053 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.3624;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2561148 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.664;LDAF=0.0030;AVGPOST=0.9949;RSQ=0.3384;ERATE=0.0012;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2561268 . CT C 71 PASS INDEL;BAVGPOST=0.999;BRSQ=0.664;LDAF=0.0042;AVGPOST=0.9957;RSQ=0.5950;ERATE=0.0009;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2561286 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.5743;AVGPOST=0.9981;RSQ=0.9964;ERATE=0.0005;THETA=0.0008;AC=1254;AN=2184 GT:DS:GL:BD 0.57417583 1
1 2561377 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0059;AVGPOST=0.9992;RSQ=0.9380;ERATE=0.0004;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2561575 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0079;AVGPOST=0.9994;RSQ=0.9657;ERATE=0.0004;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2561752 . TGA T 2165 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0088;AVGPOST=0.9995;RSQ=0.9704;ERATE=0.0004;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 2561847 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.902;LDAF=0.0182;AVGPOST=0.9970;RSQ=0.9423;ERATE=0.0004;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 2561877 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2561889 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.828;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9382;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2561894 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5962;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2561911 . ATG A 1400 PASS INDEL;BAVGPOST=0.990;BRSQ=0.739;LDAF=0.0231;AVGPOST=0.9800;RSQ=0.6649;ERATE=0.0093;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 2561916 . TGTGTGTGCAC T 2024 PASS INDEL;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0080;AVGPOST=0.9993;RSQ=0.9593;ERATE=0.0005;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2561980 . GTC G 5302 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0176;AVGPOST=0.9995;RSQ=0.9881;ERATE=0.0004;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 2561985 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0064;AVGPOST=0.9991;RSQ=0.9468;ERATE=0.0004;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2562008 . CTG C 37 PASS INDEL;BAVGPOST=0.989;BRSQ=0.706;LDAF=0.0139;AVGPOST=0.9909;RSQ=0.7642;ERATE=0.0004;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 2562009 . TGTGA T 6375 PASS INDEL;BAVGPOST=0.993;BRSQ=0.878;LDAF=0.0256;AVGPOST=0.9957;RSQ=0.9343;ERATE=0.0006;THETA=0.0005;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 2562024 . ACG A 18456 PASS INDEL;BAVGPOST=0.962;BRSQ=0.915;LDAF=0.3223;AVGPOST=0.9593;RSQ=0.9282;ERATE=0.0119;THETA=0.0007;AC=718;AN=2184 GT:DS:GL:BD 0.32875457 0
1 2562077 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0130;AVGPOST=0.9996;RSQ=0.9868;ERATE=0.0004;THETA=0.0006;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 2562118 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7076;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2562154 . CTG C 303 PASS INDEL;BAVGPOST=0.998;BRSQ=0.680;LDAF=0.0038;AVGPOST=0.9958;RSQ=0.5435;ERATE=0.0028;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2562169 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5401;AVGPOST=0.9981;RSQ=0.9968;ERATE=0.0004;THETA=0.0005;AC=1180;AN=2184 GT:DS:GL:BD 0.54029304 1
1 2562185 . CAT C 2693 PASS INDEL;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0075;AVGPOST=0.9995;RSQ=0.9703;ERATE=0.0003;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2562216 . CGT C 12370 PASS INDEL;BAVGPOST=0.997;BRSQ=0.965;LDAF=0.0511;AVGPOST=0.9959;RSQ=0.9667;ERATE=0.0003;THETA=0.0005;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 2562249 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8364;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2562274 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.545;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5864;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2562313 . ATG A 648 PASS INDEL;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8592;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2562346 . TTG T 357 PASS INDEL;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0020;AVGPOST=0.9982;RSQ=0.6885;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2562468 . TTG T 161 PASS INDEL;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0022;AVGPOST=0.9980;RSQ=0.6150;ERATE=0.0007;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2562621 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0029;AVGPOST=0.9987;RSQ=0.7858;ERATE=0.0006;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2562655 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7640;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2562787 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.678;LDAF=0.0065;AVGPOST=0.9930;RSQ=0.6308;ERATE=0.0005;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2562820 . GC G 358 PASS INDEL;BAVGPOST=0.997;BRSQ=0.644;LDAF=0.0062;AVGPOST=0.9962;RSQ=0.7619;ERATE=0.0005;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2562934 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.4933;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2562962 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5305;ERATE=0.0006;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2562996 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0183;AVGPOST=0.9984;RSQ=0.9670;ERATE=0.0004;THETA=0.0003;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 2563250 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5234;AVGPOST=0.9975;RSQ=0.9958;ERATE=0.0006;THETA=0.0005;AC=1143;AN=2184 GT:DS:GL:BD 0.52335167 1
1 2563262 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0062;AVGPOST=0.9993;RSQ=0.9490;ERATE=0.0003;THETA=0.0016;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2563399 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.668;LDAF=0.0031;AVGPOST=0.9948;RSQ=0.3415;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2563512 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0041;AVGPOST=0.9955;RSQ=0.5786;ERATE=0.0007;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2563543 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.698;LDAF=0.0022;AVGPOST=0.9972;RSQ=0.4291;ERATE=0.0007;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2563740 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7323;ERATE=0.0005;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2563808 . GTGAA G 113 PASS INDEL;BAVGPOST=0.996;BRSQ=0.704;LDAF=0.0183;AVGPOST=0.9779;RSQ=0.5126;ERATE=0.0039;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 2563837 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9087;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2563901 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0065;AVGPOST=0.9994;RSQ=0.9546;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2563934 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7519;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2563967 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.925;LDAF=0.0126;AVGPOST=0.9976;RSQ=0.9188;ERATE=0.0003;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 2563969 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8474;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2563996 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0130;AVGPOST=0.9993;RSQ=0.9746;ERATE=0.0004;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 2564012 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3718;AVGPOST=0.9970;RSQ=0.9948;ERATE=0.0006;THETA=0.0013;AC=812;AN=2184 GT:DS:GL:BD 0.37179488 0
1 2564068 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5025;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2564081 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8734;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2564183 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5769;AVGPOST=0.9980;RSQ=0.9963;ERATE=0.0005;THETA=0.0005;AC=1260;AN=2184 GT:DS:GL:BD 0.57692307 1
1 2564190 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8394;ERATE=0.0004;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2564279 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0034;AVGPOST=0.9997;RSQ=0.9545;ERATE=0.0004;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2564281 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.5817;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2564395 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7089;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2564465 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5761;AVGPOST=0.9941;RSQ=0.9902;ERATE=0.0014;THETA=0.0004;AC=1260;AN=2184 GT:DS:GL:BD 0.57692307 1
1 2564487 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0191;AVGPOST=0.9991;RSQ=0.9778;ERATE=0.0006;THETA=0.0007;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 2564746 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8311;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2564777 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.524;LDAF=0.0059;AVGPOST=0.9929;RSQ=0.5817;ERATE=0.0008;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2564805 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3539;AVGPOST=0.9926;RSQ=0.9873;ERATE=0.0015;THETA=0.0004;AC=775;AN=2184 GT:DS:GL:BD 0.35485348 0
1 2564999 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0086;AVGPOST=0.9954;RSQ=0.7762;ERATE=0.0007;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2565230 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.977;LDAF=0.0376;AVGPOST=0.9958;RSQ=0.9527;ERATE=0.0006;THETA=0.0011;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 2565327 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.778;LDAF=0.0130;AVGPOST=0.9944;RSQ=0.8348;ERATE=0.0003;THETA=0.0006;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 2565519 . AT A 836 PASS INDEL;BAVGPOST=0.994;BRSQ=0.648;LDAF=0.0138;AVGPOST=0.9887;RSQ=0.6795;ERATE=0.0015;THETA=0.0006;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 2565726 . CAG C 117 PASS INDEL;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0027;AVGPOST=0.9980;RSQ=0.6891;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2565912 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0044;AVGPOST=0.9970;RSQ=0.7082;ERATE=0.0004;THETA=0.0020;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2566025 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3568;AVGPOST=0.9957;RSQ=0.9927;ERATE=0.0008;THETA=0.0007;AC=778;AN=2184 GT:DS:GL:BD 0.35622710 0
1 2566191 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.838;LDAF=0.0257;AVGPOST=0.9873;RSQ=0.8098;ERATE=0.0011;THETA=0.0005;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 2566221 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.913;BRSQ=0.573;LDAF=0.1270;AVGPOST=0.9638;RSQ=0.8797;ERATE=0.0013;THETA=0.0005;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 2566288 . TCCC T 230 PASS INDEL;BAVGPOST=0.988;BRSQ=0.440;LDAF=0.0323;AVGPOST=0.9527;RSQ=0.4135;ERATE=0.0053;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 2566321 . ACACC A 203 PASS INDEL;BAVGPOST=0.989;BRSQ=0.552;LDAF=0.0475;AVGPOST=0.9331;RSQ=0.4234;ERATE=0.0090;THETA=0.0014;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 2566362 . T TCCC 16 PASS INDEL;BAVGPOST=0.999;BRSQ=0.702;LDAF=0.0098;AVGPOST=0.9878;RSQ=0.5270;ERATE=0.0015;THETA=0.0009;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2566433 . TCCC T 1140 PASS INDEL;BAVGPOST=0.935;BRSQ=0.442;LDAF=0.1368;AVGPOST=0.8214;RSQ=0.3712;ERATE=0.0319;THETA=0.0007;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 2566466 rs113402723 ACACC A 1755 PASS INDEL;BAVGPOST=0.867;BRSQ=0.408;LDAF=0.1843;AVGPOST=0.8139;RSQ=0.4958;ERATE=0.0221;THETA=0.0004;AC=280;AN=2184 GT:DS:GL:BD 0.12820514 0
1 2566482 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.867;BRSQ=0.433;LDAF=0.1954;AVGPOST=0.8133;RSQ=0.5202;ERATE=0.0127;THETA=0.0008;AC=324;AN=2184 GT:DS:GL:BD 0.14835165 0
1 2566490 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.825;BRSQ=0.643;LDAF=0.3255;AVGPOST=0.8713;RSQ=0.7928;ERATE=0.0046;THETA=0.0005;AC=724;AN=2184 GT:DS:GL:BD 0.33150184 0
1 2566497 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.833;BRSQ=0.678;LDAF=0.3458;AVGPOST=0.8515;RSQ=0.7628;ERATE=0.0071;THETA=0.0009;AC=750;AN=2184 GT:DS:GL:BD 0.34340659 0
1 2566623 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.967;BRSQ=0.870;LDAF=0.1466;AVGPOST=0.9729;RSQ=0.9177;ERATE=0.0045;THETA=0.0003;AC=313;AN=2184 GT:DS:GL:BD 0.14331502 0
1 2566639 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0056;AVGPOST=0.9991;RSQ=0.9262;ERATE=0.0004;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2566644 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0009;AVGPOST=0.9985;RSQ=0.3903;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2566646 . A ACCT 59 PASS INDEL;BAVGPOST=1.000;BRSQ=0.700;LDAF=0.0035;AVGPOST=0.9965;RSQ=0.6033;ERATE=0.0006;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2566698 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.581;LDAF=0.0048;AVGPOST=0.9975;RSQ=0.7674;ERATE=0.0010;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2566838 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.3880;ERATE=0.0005;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2566937 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.987;LDAF=0.1783;AVGPOST=0.9947;RSQ=0.9854;ERATE=0.0004;THETA=0.0007;AC=386;AN=2184 GT:DS:GL:BD 0.17673993 0
1 2566938 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.957;LDAF=0.0157;AVGPOST=0.9941;RSQ=0.8401;ERATE=0.0008;THETA=0.0007;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2566942 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.366;LDAF=0.0028;AVGPOST=0.9963;RSQ=0.5345;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2566976 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9614;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2567181 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.572;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4425;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2567221 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.683;LDAF=0.0054;AVGPOST=0.9961;RSQ=0.7150;ERATE=0.0005;THETA=0.0017;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2567222 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.793;LDAF=0.0104;AVGPOST=0.9937;RSQ=0.7718;ERATE=0.0004;THETA=0.0011;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2567421 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3939;AVGPOST=0.9969;RSQ=0.9949;ERATE=0.0005;THETA=0.0005;AC=861;AN=2184 GT:DS:GL:BD 0.39423078 0
1 2567491 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.989;LDAF=0.3537;AVGPOST=0.9972;RSQ=0.9953;ERATE=0.0004;THETA=0.0004;AC=774;AN=2184 GT:DS:GL:BD 0.35439560 0
1 2567500 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.994;LDAF=0.5619;AVGPOST=0.9962;RSQ=0.9932;ERATE=0.0006;THETA=0.0006;AC=1228;AN=2184 GT:DS:GL:BD 0.56227106 1
1 2567535 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6307;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2567552 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2567562 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0344;AVGPOST=0.9996;RSQ=0.9953;ERATE=0.0004;THETA=0.0004;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 2567641 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.899;LDAF=0.0066;AVGPOST=0.9994;RSQ=0.9566;ERATE=0.0004;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2567651 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0130;AVGPOST=0.9995;RSQ=0.9845;ERATE=0.0003;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 2567694 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0268;AVGPOST=0.9952;RSQ=0.9422;ERATE=0.0004;THETA=0.0006;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 2567702 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.664;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8210;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2567738 . AG A 169 PASS INDEL;BAVGPOST=0.998;BRSQ=0.735;LDAF=0.0054;AVGPOST=0.9973;RSQ=0.8161;ERATE=0.0005;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2567867 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.834;LDAF=0.0088;AVGPOST=0.9966;RSQ=0.8631;ERATE=0.0003;THETA=0.0009;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2567906 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5041;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2568290 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.762;LDAF=0.0015;AVGPOST=0.9978;RSQ=0.3815;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2568298 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.896;LDAF=0.0074;AVGPOST=0.9973;RSQ=0.8565;ERATE=0.0006;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2568360 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.854;LDAF=0.0093;AVGPOST=0.9989;RSQ=0.9498;ERATE=0.0004;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 2568368 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5051;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2568425 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.3564;AVGPOST=0.9945;RSQ=0.9910;ERATE=0.0006;THETA=0.0007;AC=782;AN=2184 GT:DS:GL:BD 0.35805860 0
1 2568459 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9069;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2568460 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0021;AVGPOST=0.9977;RSQ=0.5515;ERATE=0.0011;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2568703 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9997;RSQ=0.9572;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2568761 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9673;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2568799 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5561;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2568839 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9996;RSQ=0.9660;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2568841 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5431;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2568879 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0004;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2568902 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0079;AVGPOST=0.9997;RSQ=0.9834;ERATE=0.0004;THETA=0.0012;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2568941 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0020;AVGPOST=0.9993;RSQ=0.8449;ERATE=0.0004;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2569034 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0039;AVGPOST=0.9987;RSQ=0.8922;ERATE=0.0003;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2569068 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=0.9995;RSQ=0.9575;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2569170 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.947;LDAF=0.0254;AVGPOST=0.9979;RSQ=0.9659;ERATE=0.0004;THETA=0.0012;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 2569172 rs57154273 TCA T 5510 PASS INDEL;BAVGPOST=0.997;BRSQ=0.966;LDAF=0.0247;AVGPOST=0.9979;RSQ=0.9685;ERATE=0.0004;THETA=0.0004;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 2569333 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0025;AVGPOST=0.9990;RSQ=0.8288;ERATE=0.0003;THETA=0.0014;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2569461 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0049;AVGPOST=0.9994;RSQ=0.9435;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2569471 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7727;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2569489 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6872;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2569552 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0129;AVGPOST=0.9996;RSQ=0.9846;ERATE=0.0003;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 2569575 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7918;ERATE=0.0008;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2569770 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8311;ERATE=0.0005;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2569783 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0054;AVGPOST=0.9991;RSQ=0.9344;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2569879 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.845;LDAF=0.0065;AVGPOST=0.9995;RSQ=0.9680;ERATE=0.0003;THETA=0.0009;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2569880 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0076;AVGPOST=0.9995;RSQ=0.9718;ERATE=0.0003;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2569922 . G GT 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.763;LDAF=0.0020;AVGPOST=0.9969;RSQ=0.3855;ERATE=0.0007;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2569927 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.965;LDAF=0.0209;AVGPOST=0.9991;RSQ=0.9844;ERATE=0.0004;THETA=0.0008;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 2570012 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0157;AVGPOST=0.9989;RSQ=0.9752;ERATE=0.0004;THETA=0.0017;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 2570023 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.5818;AVGPOST=0.9933;RSQ=0.9880;ERATE=0.0007;THETA=0.0005;AC=1272;AN=2184 GT:DS:GL:BD 0.58241761 1
1 2570064 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9987;RSQ=0.8766;ERATE=0.0005;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2570071 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0177;AVGPOST=0.9994;RSQ=0.9847;ERATE=0.0004;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 2570126 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0252;AVGPOST=0.9993;RSQ=0.9886;ERATE=0.0005;THETA=0.0009;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 2570185 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0176;AVGPOST=0.9995;RSQ=0.9878;ERATE=0.0004;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 2570391 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.826;LDAF=0.0137;AVGPOST=0.9983;RSQ=0.9416;ERATE=0.0004;THETA=0.0007;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2570495 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.822;LDAF=0.0062;AVGPOST=0.9962;RSQ=0.7349;ERATE=0.0007;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2570543 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7032;ERATE=0.0007;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2570809 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.828;LDAF=0.0025;AVGPOST=0.9988;RSQ=0.7904;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2570834 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5888;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2570897 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.922;LDAF=0.0197;AVGPOST=0.9952;RSQ=0.9068;ERATE=0.0004;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 2571012 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.613;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6508;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2571016 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9019;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2571040 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.864;LDAF=0.0079;AVGPOST=0.9993;RSQ=0.9618;ERATE=0.0003;THETA=0.0008;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2571048 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.905;LDAF=0.0118;AVGPOST=0.9957;RSQ=0.8723;ERATE=0.0004;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 2571100 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0018;AVGPOST=0.9974;RSQ=0.4285;ERATE=0.0003;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2571137 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9670;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2571157 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2571162 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0049;AVGPOST=0.9993;RSQ=0.9343;ERATE=0.0004;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2571202 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0165;AVGPOST=0.9977;RSQ=0.9463;ERATE=0.0005;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 2571270 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0024;AVGPOST=0.9983;RSQ=0.7176;ERATE=0.0006;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2571295 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0056;AVGPOST=0.9946;RSQ=0.6419;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2571394 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.625;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6870;ERATE=0.0004;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2571476 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9545;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2571495 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9642;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2571586 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0130;AVGPOST=0.9995;RSQ=0.9831;ERATE=0.0004;THETA=0.0007;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 2571593 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6644;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2571675 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0176;AVGPOST=0.9995;RSQ=0.9882;ERATE=0.0004;THETA=0.0007;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 2571679 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.849;LDAF=0.0051;AVGPOST=0.9979;RSQ=0.8650;ERATE=0.0004;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2571701 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.544;LDAF=0.0026;AVGPOST=0.9976;RSQ=0.5908;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2571823 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5816;AVGPOST=0.9952;RSQ=0.9916;ERATE=0.0004;THETA=0.0010;AC=1269;AN=2184 GT:DS:GL:BD 0.58104396 1
1 2571832 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.764;LDAF=0.0068;AVGPOST=0.9988;RSQ=0.9160;ERATE=0.0004;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2571840 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.740;LDAF=0.0030;AVGPOST=0.9976;RSQ=0.6978;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2571861 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.713;LDAF=0.0038;AVGPOST=0.9981;RSQ=0.7780;ERATE=0.0005;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2571981 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.5576;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2572135 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.741;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.5831;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2572312 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.737;LDAF=0.0022;AVGPOST=0.9972;RSQ=0.4869;ERATE=0.0008;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2572413 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0007;AVGPOST=0.9986;RSQ=0.1655;ERATE=0.0005;THETA=0.0007;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 2572643 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.844;LDAF=0.0294;AVGPOST=0.9796;RSQ=0.7329;ERATE=0.0015;THETA=0.0005;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 2573093 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0021;AVGPOST=0.9967;RSQ=0.3274;ERATE=0.0008;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2573199 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.9215;AVGPOST=0.9917;RSQ=0.9543;ERATE=0.0011;THETA=0.0004;AC=2018;AN=2184 GT:DS:GL:BD 0.92399269 1
1 2573266 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.659;LDAF=0.0019;AVGPOST=0.9974;RSQ=0.4075;ERATE=0.0006;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2573436 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.845;LDAF=0.0055;AVGPOST=0.9971;RSQ=0.8089;ERATE=0.0006;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2573480 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.641;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.7565;ERATE=0.0005;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2573727 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.9239;AVGPOST=0.9946;RSQ=0.9676;ERATE=0.0006;THETA=0.0007;AC=2020;AN=2184 GT:DS:GL:BD 0.92490840 1
1 2573777 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2573788 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.693;LDAF=0.0059;AVGPOST=0.9920;RSQ=0.4787;ERATE=0.0007;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2573903 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.3433;AVGPOST=0.9872;RSQ=0.9774;ERATE=0.0009;THETA=0.0006;AC=753;AN=2184 GT:DS:GL:BD 0.34478021 0
1 2573984 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0130;AVGPOST=0.9996;RSQ=0.9863;ERATE=0.0003;THETA=0.0008;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 2574020 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7828;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2574078 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5725;AVGPOST=0.9930;RSQ=0.9878;ERATE=0.0007;THETA=0.0013;AC=1249;AN=2184 GT:DS:GL:BD 0.57188642 1
1 2574268 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.418;LDAF=0.0029;AVGPOST=0.9953;RSQ=0.3055;ERATE=0.0010;THETA=0.0029;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2574314 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.919;LDAF=0.0122;AVGPOST=0.9930;RSQ=0.7805;ERATE=0.0005;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 2574463 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.824;LDAF=0.0302;AVGPOST=0.9771;RSQ=0.7091;ERATE=0.0017;THETA=0.0009;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 2574574 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.841;LDAF=0.0208;AVGPOST=0.9809;RSQ=0.6832;ERATE=0.0017;THETA=0.0011;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 2574587 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.873;LDAF=0.0479;AVGPOST=0.9733;RSQ=0.7733;ERATE=0.0016;THETA=0.0006;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 2575091 . C CG 810 PASS INDEL;BAVGPOST=0.964;BRSQ=0.470;LDAF=0.0662;AVGPOST=0.9325;RSQ=0.5676;ERATE=0.0072;THETA=0.0006;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 2575093 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0052;AVGPOST=0.9972;RSQ=0.7549;ERATE=0.0007;THETA=0.0015;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2575096 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.908;LDAF=0.0421;AVGPOST=0.9893;RSQ=0.9008;ERATE=0.0005;THETA=0.0007;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 2575232 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0061;AVGPOST=0.9998;RSQ=0.9819;ERATE=0.0003;THETA=0.0009;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2575275 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.733;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7993;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2575297 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.942;LDAF=0.0112;AVGPOST=0.9984;RSQ=0.9337;ERATE=0.0005;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 2575390 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.813;LDAF=0.0018;AVGPOST=0.9986;RSQ=0.6642;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2575533 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0130;AVGPOST=0.9995;RSQ=0.9813;ERATE=0.0004;THETA=0.0007;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 2575536 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.665;LDAF=0.0021;AVGPOST=0.9977;RSQ=0.5349;ERATE=0.0008;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2575569 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0103;AVGPOST=0.9974;RSQ=0.9014;ERATE=0.0009;THETA=0.0011;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 2575630 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7478;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2575733 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0160;AVGPOST=0.9991;RSQ=0.9772;ERATE=0.0004;THETA=0.0007;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 2575764 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8638;ERATE=0.0004;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2575798 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.611;LDAF=0.0022;AVGPOST=0.9964;RSQ=0.3204;ERATE=0.0006;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2575811 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.925;LDAF=0.0148;AVGPOST=0.9981;RSQ=0.9447;ERATE=0.0006;THETA=0.0010;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 2575827 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.673;LDAF=0.0023;AVGPOST=0.9963;RSQ=0.3758;ERATE=0.0007;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2575872 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.804;LDAF=0.0037;AVGPOST=0.9988;RSQ=0.8576;ERATE=0.0004;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2576308 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0024;AVGPOST=0.9986;RSQ=0.7319;ERATE=0.0006;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2576337 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.895;LDAF=0.0112;AVGPOST=0.9955;RSQ=0.8521;ERATE=0.0004;THETA=0.0010;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 2576380 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9592;ERATE=0.0004;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2576455 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.794;LDAF=0.9906;AVGPOST=0.9966;RSQ=0.8449;ERATE=0.0006;THETA=0.0008;AC=2166;AN=2184 GT:DS:GL:BD 0.99175823 1
1 2576723 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0067;AVGPOST=0.9984;RSQ=0.8988;ERATE=0.0006;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2576779 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.757;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5297;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2576959 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.871;LDAF=0.0291;AVGPOST=0.9905;RSQ=0.8658;ERATE=0.0008;THETA=0.0009;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 2577020 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0097;AVGPOST=0.9892;RSQ=0.5971;ERATE=0.0006;THETA=0.0011;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2577129 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5756;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2577154 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.7747;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2577229 . AC A 400 PASS INDEL;BAVGPOST=0.997;BRSQ=0.674;LDAF=0.0043;AVGPOST=0.9970;RSQ=0.7351;ERATE=0.0006;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2577280 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0224;AVGPOST=0.9991;RSQ=0.9811;ERATE=0.0003;THETA=0.0007;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 2577312 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.741;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8079;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2577378 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.7825;ERATE=0.0005;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2577403 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4796;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2577436 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0222;AVGPOST=0.9994;RSQ=0.9863;ERATE=0.0004;THETA=0.0004;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 2577560 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7143;ERATE=0.0004;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2577562 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6252;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2577613 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0654;AVGPOST=0.9998;RSQ=0.9987;ERATE=0.0003;THETA=0.0006;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 2577681 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.822;LDAF=0.0022;AVGPOST=0.9982;RSQ=0.6382;ERATE=0.0004;THETA=0.0016;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2577742 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5697;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2577786 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0132;AVGPOST=0.9992;RSQ=0.9777;ERATE=0.0003;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 2577849 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.482;LDAF=0.0033;AVGPOST=0.9955;RSQ=0.4587;ERATE=0.0006;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2577948 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4819;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2578092 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.7432;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2578171 . T TA 12 PASS INDEL;BAVGPOST=0.999;BRSQ=0.773;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.5192;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2578182 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.809;LDAF=0.0041;AVGPOST=0.9984;RSQ=0.8378;ERATE=0.0005;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2578220 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.3433;AVGPOST=0.9942;RSQ=0.9900;ERATE=0.0006;THETA=0.0006;AC=749;AN=2184 GT:DS:GL:BD 0.34294870 0
1 2578243 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.855;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9177;ERATE=0.0010;THETA=0.0017;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2578279 . GGT G 99 PASS INDEL;BAVGPOST=0.999;BRSQ=0.689;LDAF=0.0043;AVGPOST=0.9965;RSQ=0.6731;ERATE=0.0008;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2578549 . CCAA C 382 PASS INDEL;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8724;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2578554 . ATGTGCCTT A 801 PASS INDEL;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0034;AVGPOST=0.9984;RSQ=0.8003;ERATE=0.0005;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2578674 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.748;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8358;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2578729 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.925;LDAF=0.0197;AVGPOST=0.9964;RSQ=0.9283;ERATE=0.0004;THETA=0.0005;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 2578751 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9019;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2578801 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.882;LDAF=0.0395;AVGPOST=0.9902;RSQ=0.9031;ERATE=0.0008;THETA=0.0003;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 2578803 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0160;AVGPOST=0.9989;RSQ=0.9734;ERATE=0.0004;THETA=0.0006;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 2578900 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0097;AVGPOST=0.9983;RSQ=0.9243;ERATE=0.0004;THETA=0.0017;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 2579067 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.894;LDAF=0.0138;AVGPOST=0.9982;RSQ=0.9493;ERATE=0.0004;THETA=0.0007;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2579096 . CTTTTA C 1090 PASS INDEL;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0130;AVGPOST=0.9995;RSQ=0.9812;ERATE=0.0004;THETA=0.0011;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 2579127 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.567;LDAF=0.0026;AVGPOST=0.9976;RSQ=0.6071;ERATE=0.0006;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2579409 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.651;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6434;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2579420 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9943;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2579469 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0129;AVGPOST=0.9999;RSQ=0.9948;ERATE=0.0003;THETA=0.0007;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 2579522 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6808;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2579544 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8371;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2579560 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0024;AVGPOST=0.9994;RSQ=0.8887;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2579598 . ACTT A 3172 PASS INDEL;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0230;AVGPOST=0.9993;RSQ=0.9860;ERATE=0.0005;THETA=0.0024;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 2579734 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0061;AVGPOST=0.9995;RSQ=0.9626;ERATE=0.0003;THETA=0.0018;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2579943 . CTGT C 54 PASS INDEL;BAVGPOST=0.999;BRSQ=0.711;LDAF=0.0018;AVGPOST=0.9986;RSQ=0.6729;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2579948 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0057;AVGPOST=0.9996;RSQ=0.9668;ERATE=0.0004;THETA=0.0028;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2580294 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.568;LDAF=0.0037;AVGPOST=0.9973;RSQ=0.6804;ERATE=0.0011;THETA=0.0023;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2580691 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2580762 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2580831 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.864;LDAF=0.0029;AVGPOST=0.9994;RSQ=0.9063;ERATE=0.0003;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2580877 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0018;AVGPOST=0.9994;RSQ=0.8755;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2580956 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8943;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2581072 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0159;AVGPOST=0.9982;RSQ=0.9512;ERATE=0.0005;THETA=0.0011;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 2581101 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0054;AVGPOST=0.9981;RSQ=0.8645;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2581214 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.816;LDAF=0.0165;AVGPOST=0.9888;RSQ=0.7355;ERATE=0.0028;THETA=0.0009;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 2581234 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.771;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0004;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2581237 rs75566790 G GT 1588 PASS INDEL;BAVGPOST=0.997;BRSQ=0.837;LDAF=0.0084;AVGPOST=0.9952;RSQ=0.7934;ERATE=0.0005;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2581542 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.947;LDAF=0.5808;AVGPOST=0.9446;RSQ=0.9112;ERATE=0.0197;THETA=0.0005;AC=1276;AN=2184 GT:DS:GL:BD 0.58424908 1
1 2581544 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0207;AVGPOST=0.9978;RSQ=0.9601;ERATE=0.0004;THETA=0.0010;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 2581688 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.920;LDAF=0.0279;AVGPOST=0.9958;RSQ=0.9381;ERATE=0.0005;THETA=0.0006;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 2581800 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.4160;ERATE=0.0004;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2581964 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9812;ERATE=0.0004;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2582060 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.913;LDAF=0.0113;AVGPOST=0.9981;RSQ=0.9295;ERATE=0.0004;THETA=0.0006;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 2582084 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0107;AVGPOST=0.9989;RSQ=0.9541;ERATE=0.0003;THETA=0.0011;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 2582167 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9865;ERATE=0.0003;THETA=0.0040;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2582248 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.622;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8481;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2582251 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0134;AVGPOST=0.9987;RSQ=0.9549;ERATE=0.0005;THETA=0.0007;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 2582278 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0052;AVGPOST=0.9987;RSQ=0.9018;ERATE=0.0004;THETA=0.0034;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2582340 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.962;BRSQ=0.908;LDAF=0.3067;AVGPOST=0.9633;RSQ=0.9329;ERATE=0.0066;THETA=0.0018;AC=673;AN=2184 GT:DS:GL:BD 0.30815017 0
1 2582485 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0004;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2582502 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0129;AVGPOST=0.9998;RSQ=0.9931;ERATE=0.0004;THETA=0.0012;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 2582548 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0229;AVGPOST=0.9995;RSQ=0.9889;ERATE=0.0004;THETA=0.0008;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 2582572 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5995;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2582660 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.438;LDAF=0.0055;AVGPOST=0.9924;RSQ=0.4635;ERATE=0.0032;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2582746 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5092;ERATE=0.0005;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2582858 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7946;ERATE=0.0004;THETA=0.0022;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2582865 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0040;AVGPOST=0.9983;RSQ=0.8221;ERATE=0.0004;THETA=0.0045;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2582904 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6894;ERATE=0.0004;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2582995 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0186;AVGPOST=0.9990;RSQ=0.9761;ERATE=0.0004;THETA=0.0007;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 2583124 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7048;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2583151 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6745;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2583272 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.869;LDAF=0.0159;AVGPOST=0.9955;RSQ=0.8850;ERATE=0.0007;THETA=0.0009;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 2583289 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6291;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2583322 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0651;AVGPOST=0.9988;RSQ=0.9927;ERATE=0.0003;THETA=0.0010;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 2583340 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2588573 . C CA 50 PASS INDEL;BAVGPOST=0.947;BRSQ=0.110;LDAF=0.1040;AVGPOST=0.8472;RSQ=0.3453;ERATE=0.0083;THETA=0.0010;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 2588850 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.484;LDAF=0.0177;AVGPOST=0.9788;RSQ=0.5864;ERATE=0.0006;THETA=0.0009;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 2589299 . AC A 9 PASS INDEL;BAVGPOST=0.900;BRSQ=0.038;LDAF=0.1961;AVGPOST=0.7075;RSQ=0.2373;ERATE=0.0197;THETA=0.0004;AC=159;AN=2184 GT:DS:GL:BD 0.07280220 0
1 2589336 . CT C 126 PASS INDEL;BAVGPOST=0.799;BRSQ=0.031;LDAF=0.2507;AVGPOST=0.6439;RSQ=0.2145;ERATE=0.0238;THETA=0.0030;AC=282;AN=2184 GT:DS:GL:BD 0.12912089 0
1 2589378 . AC A 67 PASS INDEL;BAVGPOST=0.804;BRSQ=0.023;LDAF=0.1895;AVGPOST=0.7423;RSQ=0.3177;ERATE=0.0153;THETA=0.0011;AC=216;AN=2184 GT:DS:GL:BD 0.09890110 0
1 2591660 . AC A 2884 PASS INDEL;BAVGPOST=0.412;BRSQ=0.102;LDAF=0.5675;AVGPOST=0.6012;RSQ=0.2552;ERATE=0.0634;THETA=0.0012;AC=1311;AN=2184 GT:DS:GL:BD 0.60027474 1
1 2592182 . AC A 420 PASS INDEL;BAVGPOST=0.948;BRSQ=0.380;LDAF=0.1142;AVGPOST=0.8415;RSQ=0.3752;ERATE=0.0233;THETA=0.0013;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 2597443 . C CTG 38 PASS INDEL;BAVGPOST=0.883;BRSQ=0.014;LDAF=0.1287;AVGPOST=0.8094;RSQ=0.3323;ERATE=0.0094;THETA=0.0008;AC=138;AN=2184 GT:DS:GL:BD 0.06318682 0
1 2606070 . AC A 128 PASS INDEL;BAVGPOST=0.495;BRSQ=0.007;LDAF=0.2117;AVGPOST=0.6954;RSQ=0.2584;ERATE=0.0193;THETA=0.0008;AC=224;AN=2184 GT:DS:GL:BD 0.10256410 0
1 2606125 . GT G 552 PASS INDEL;BAVGPOST=0.749;BRSQ=0.011;LDAF=0.8534;AVGPOST=0.8314;RSQ=0.4694;ERATE=0.0049;THETA=0.0009;AC=1928;AN=2184 GT:DS:GL:BD 0.88278389 1
1 2606154 . CT C 135 PASS INDEL;BAVGPOST=0.791;BRSQ=0.036;LDAF=0.2264;AVGPOST=0.6771;RSQ=0.2248;ERATE=0.0227;THETA=0.0024;AC=216;AN=2184 GT:DS:GL:BD 0.09890110 0
1 2606439 . CA C 2216 PASS INDEL;BAVGPOST=0.763;BRSQ=0.072;LDAF=0.8534;AVGPOST=0.7868;RSQ=0.3278;ERATE=0.0089;THETA=0.0020;AC=2000;AN=2184 GT:DS:GL:BD 0.91575092 1
1 2607073 . CA C 23 PASS INDEL;BAVGPOST=0.913;BRSQ=0.061;LDAF=0.1098;AVGPOST=0.8414;RSQ=0.3617;ERATE=0.0077;THETA=0.0030;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 2607243 . CA C 51 PASS INDEL;BAVGPOST=0.629;BRSQ=0.027;LDAF=0.2448;AVGPOST=0.6701;RSQ=0.2691;ERATE=0.0184;THETA=0.0010;AC=312;AN=2184 GT:DS:GL:BD 0.14285715 0
1 2607405 . CA C 29 PASS INDEL;BAVGPOST=0.676;BRSQ=0.018;LDAF=0.1638;AVGPOST=0.7680;RSQ=0.3289;ERATE=0.0076;THETA=0.0015;AC=197;AN=2184 GT:DS:GL:BD 0.09020147 0
1 2607479 . C CT 13 PASS INDEL;BAVGPOST=0.798;BRSQ=0.018;LDAF=0.1114;AVGPOST=0.8251;RSQ=0.2909;ERATE=0.0109;THETA=0.0011;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 2607680 . CCACACCCCCA C 66 PASS INDEL;BAVGPOST=0.649;BRSQ=0.002;LDAF=0.1765;AVGPOST=0.7242;RSQ=0.2327;ERATE=0.0157;THETA=0.0008;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 2608318 . AC A 204 PASS INDEL;BAVGPOST=0.900;BRSQ=0.130;LDAF=0.1240;AVGPOST=0.8330;RSQ=0.4047;ERATE=0.0071;THETA=0.0042;AC=157;AN=2184 GT:DS:GL:BD 0.07188645 0
1 2609046 . GC G 39 PASS INDEL;BAVGPOST=0.937;BRSQ=0.092;LDAF=0.1617;AVGPOST=0.7513;RSQ=0.2597;ERATE=0.0211;THETA=0.0013;AC=136;AN=2184 GT:DS:GL:BD 0.06227106 0
1 2609690 . A AC 65 PASS INDEL;BAVGPOST=0.642;BRSQ=0.016;LDAF=0.1937;AVGPOST=0.7256;RSQ=0.2743;ERATE=0.0177;THETA=0.0008;AC=204;AN=2184 GT:DS:GL:BD 0.09340660 0
1 2609804 . AC A 116 PASS INDEL;BAVGPOST=0.324;BRSQ=0.007;LDAF=0.2708;AVGPOST=0.6630;RSQ=0.2870;ERATE=0.0145;THETA=0.0018;AC=407;AN=2184 GT:DS:GL:BD 0.18635531 0
1 2609925 . AC A 15 PASS INDEL;BAVGPOST=0.578;BRSQ=0.005;LDAF=0.1688;AVGPOST=0.7540;RSQ=0.2995;ERATE=0.0101;THETA=0.0029;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 2612211 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.861;BRSQ=0.133;LDAF=0.1618;AVGPOST=0.7811;RSQ=0.3608;ERATE=0.0158;THETA=0.0014;AC=196;AN=2184 GT:DS:GL:BD 0.08974359 0
1 2612639 . GA G 23 PASS INDEL;BAVGPOST=0.998;BRSQ=0.427;LDAF=0.0095;AVGPOST=0.9917;RSQ=0.6631;ERATE=0.0009;THETA=0.0019;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2613077 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.829;BRSQ=0.303;LDAF=0.1675;AVGPOST=0.8114;RSQ=0.4819;ERATE=0.0217;THETA=0.0015;AC=233;AN=2184 GT:DS:GL:BD 0.10668498 0
1 2613388 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.789;BRSQ=0.555;LDAF=0.3231;AVGPOST=0.7879;RSQ=0.5823;ERATE=0.0847;THETA=0.0012;AC=605;AN=2184 GT:DS:GL:BD 0.27701464 0
1 2614147 . CA C 1063 PASS INDEL;BAVGPOST=0.701;BRSQ=0.029;LDAF=0.7697;AVGPOST=0.6850;RSQ=0.2683;ERATE=0.0197;THETA=0.0010;AC=1860;AN=2184 GT:DS:GL:BD 0.85164833 1
1 2614187 . CA C 1155 PASS INDEL;BAVGPOST=0.651;BRSQ=0.023;LDAF=0.7718;AVGPOST=0.6862;RSQ=0.2630;ERATE=0.0218;THETA=0.0012;AC=1896;AN=2184 GT:DS:GL:BD 0.86813188 1
1 2618217 . T TGAC 9529 PASS INDEL;BAVGPOST=0.930;BRSQ=0.670;LDAF=0.1493;AVGPOST=0.8929;RSQ=0.6670;ERATE=0.0109;THETA=0.0009;AC=267;AN=2184 GT:DS:GL:BD 0.12225275 0
1 2626097 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.802;BRSQ=0.363;LDAF=0.2209;AVGPOST=0.7688;RSQ=0.4638;ERATE=0.0481;THETA=0.0023;AC=321;AN=2184 GT:DS:GL:BD 0.14697802 0
1 2630880 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.644;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6567;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2631230 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0127;AVGPOST=0.9993;RSQ=0.9803;ERATE=0.0004;THETA=0.0013;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 2631247 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.868;LDAF=0.0165;AVGPOST=0.9946;RSQ=0.8726;ERATE=0.0009;THETA=0.0017;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 2631363 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.894;LDAF=0.0754;AVGPOST=0.9894;RSQ=0.9425;ERATE=0.0005;THETA=0.0010;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 2631388 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0065;AVGPOST=0.9998;RSQ=0.9835;ERATE=0.0004;THETA=0.0075;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2631554 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.981;LDAF=0.3367;AVGPOST=0.9907;RSQ=0.9834;ERATE=0.0008;THETA=0.0006;AC=737;AN=2184 GT:DS:GL:BD 0.33745420 0
1 2631591 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.798;LDAF=0.0074;AVGPOST=0.9983;RSQ=0.9100;ERATE=0.0003;THETA=0.0010;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2631608 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.615;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4800;ERATE=0.0006;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2631626 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.520;LDAF=0.0379;AVGPOST=0.9630;RSQ=0.6091;ERATE=0.0080;THETA=0.0018;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 2631646 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.943;BRSQ=0.677;LDAF=0.1167;AVGPOST=0.9065;RSQ=0.6417;ERATE=0.0216;THETA=0.0007;AC=185;AN=2184 GT:DS:GL:BD 0.08470696 0
1 2631804 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.920;BRSQ=0.810;LDAF=0.4413;AVGPOST=0.8782;RSQ=0.7591;ERATE=0.0886;THETA=0.0009;AC=936;AN=2184 GT:DS:GL:BD 0.42857143 0
1 2631920 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.952;LDAF=0.0237;AVGPOST=0.9990;RSQ=0.9810;ERATE=0.0005;THETA=0.0005;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 2631951 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.859;LDAF=0.0064;AVGPOST=0.9979;RSQ=0.8571;ERATE=0.0005;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2632016 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.964;BRSQ=0.913;LDAF=0.2801;AVGPOST=0.9588;RSQ=0.9136;ERATE=0.0135;THETA=0.0015;AC=606;AN=2184 GT:DS:GL:BD 0.27747253 0
1 2632095 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.774;LDAF=0.0038;AVGPOST=0.9988;RSQ=0.8578;ERATE=0.0004;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2632097 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.952;LDAF=0.3394;AVGPOST=0.9634;RSQ=0.9363;ERATE=0.0067;THETA=0.0006;AC=743;AN=2184 GT:DS:GL:BD 0.34020147 0
1 2632120 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.569;LDAF=0.0041;AVGPOST=0.9962;RSQ=0.5970;ERATE=0.0006;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2632123 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0130;AVGPOST=0.9985;RSQ=0.9503;ERATE=0.0006;THETA=0.0007;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 2632145 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5074;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2632212 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0037;AVGPOST=0.9991;RSQ=0.8977;ERATE=0.0004;THETA=0.0012;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2632223 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.804;LDAF=0.0038;AVGPOST=0.9993;RSQ=0.9176;ERATE=0.0004;THETA=0.0011;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2632273 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.644;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8771;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2632282 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.728;LDAF=0.0139;AVGPOST=0.9941;RSQ=0.8160;ERATE=0.0004;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 2632289 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.849;LDAF=0.0128;AVGPOST=0.9983;RSQ=0.9447;ERATE=0.0004;THETA=0.0010;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 2632299 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2632322 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.964;LDAF=0.0229;AVGPOST=0.9994;RSQ=0.9869;ERATE=0.0004;THETA=0.0006;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 2632338 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.628;LDAF=0.0046;AVGPOST=0.9949;RSQ=0.5726;ERATE=0.0009;THETA=0.0016;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2684321 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.626;LDAF=0.0056;AVGPOST=0.9950;RSQ=0.6361;ERATE=0.0010;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2684338 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0026;AVGPOST=0.9986;RSQ=0.7950;ERATE=0.0007;THETA=0.0049;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2684547 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.984;LDAF=0.3966;AVGPOST=0.9863;RSQ=0.9758;ERATE=0.0011;THETA=0.0005;AC=868;AN=2184 GT:DS:GL:BD 0.39743590 0
1 2684554 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0022;AVGPOST=0.9988;RSQ=0.7520;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2684575 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.705;LDAF=0.0197;AVGPOST=0.9864;RSQ=0.7240;ERATE=0.0019;THETA=0.0009;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 2684678 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.649;LDAF=0.0048;AVGPOST=0.9935;RSQ=0.4729;ERATE=0.0009;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2684748 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0118;AVGPOST=0.9919;RSQ=0.7207;ERATE=0.0011;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 2684773 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.816;LDAF=0.0069;AVGPOST=0.9968;RSQ=0.8025;ERATE=0.0007;THETA=0.0009;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2684782 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.979;LDAF=0.4200;AVGPOST=0.9846;RSQ=0.9732;ERATE=0.0013;THETA=0.0007;AC=916;AN=2184 GT:DS:GL:BD 0.41941392 0
1 2685721 . CA C 33 PASS INDEL;BAVGPOST=0.831;BRSQ=0.021;LDAF=0.1407;AVGPOST=0.7974;RSQ=0.3322;ERATE=0.0117;THETA=0.0005;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 2685819 . G GT 8 PASS INDEL;BAVGPOST=0.976;BRSQ=0.068;LDAF=0.0609;AVGPOST=0.9077;RSQ=0.3885;ERATE=0.0034;THETA=0.0010;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 2685925 . AC A 1017 PASS INDEL;BAVGPOST=0.672;BRSQ=0.095;LDAF=0.2931;AVGPOST=0.6463;RSQ=0.2515;ERATE=0.0370;THETA=0.0007;AC=368;AN=2184 GT:DS:GL:BD 0.16849817 0
1 2685969 . C CT 301 PASS INDEL;BAVGPOST=0.915;BRSQ=0.144;LDAF=0.1367;AVGPOST=0.7982;RSQ=0.3131;ERATE=0.0125;THETA=0.0010;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 2686138 . TC T 490 PASS INDEL;BAVGPOST=0.996;BRSQ=0.925;LDAF=0.0240;AVGPOST=0.9947;RSQ=0.9044;ERATE=0.0008;THETA=0.0007;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 2686719 . CA C 19 PASS INDEL;BAVGPOST=0.858;BRSQ=0.017;LDAF=0.1873;AVGPOST=0.7318;RSQ=0.2860;ERATE=0.0151;THETA=0.0011;AC=204;AN=2184 GT:DS:GL:BD 0.09340660 0
1 2688741 . AC A 971 PASS INDEL;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0122;AVGPOST=0.9983;RSQ=0.9478;ERATE=0.0003;THETA=0.0007;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 2689677 . CA C 21 PASS INDEL;BAVGPOST=0.996;BRSQ=0.516;LDAF=0.0073;AVGPOST=0.9888;RSQ=0.3800;ERATE=0.0013;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2691855 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.9990;AVGPOST=0.9990;RSQ=0.6159;ERATE=0.0003;THETA=0.0008;AC=2182;AN=2184 GT:DS:GL:BD 0.99908423 1
1 2691893 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4882;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2692159 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.726;LDAF=0.0021;AVGPOST=0.9987;RSQ=0.7278;ERATE=0.0006;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2692189 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4759;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2692277 . GC G 69 PASS INDEL;BAVGPOST=1.000;BRSQ=0.651;LDAF=0.0024;AVGPOST=0.9961;RSQ=0.2541;ERATE=0.0006;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2692336 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.557;LDAF=0.0613;AVGPOST=0.9364;RSQ=0.5701;ERATE=0.0182;THETA=0.0008;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 2692438 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.582;LDAF=0.0107;AVGPOST=0.9923;RSQ=0.7373;ERATE=0.0010;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 2692647 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.734;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6030;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2693029 MERGED_DEL_2_800 CTTCAGGTGAGCATCTGACAGCCTGGAACAGCACCCTCCACCTTCAGGTGAGAATATGACAGCCTGAAACAGCACCCCACACCCCAGGCAAAAATCTGACAGCATGGAACAAGACCACTGCCCCCAGGTGAGCATTTGACAGCCCGGGAAAGTACCCTCCATGCACAGGTGAGCATCTGACAGCCTGGAA CG . . SV;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5165;ERATE=0.0006;THETA=0.0017;CIEND=-10,25;CIPOS=-25,9;END=2697101;HOMLEN=2;HOMSEQ=TT;SOURCE=EMBLdelly_2693029_2697102;SVLEN=-4 GT:DS:GL:BD 0.00045788 0
1 2693926 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0240;AVGPOST=0.9977;RSQ=0.9655;ERATE=0.0004;THETA=0.0004;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 2693928 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.969;LDAF=0.0504;AVGPOST=0.9973;RSQ=0.9799;ERATE=0.0004;THETA=0.0005;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 2693944 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.431;LDAF=0.0095;AVGPOST=0.9866;RSQ=0.4352;ERATE=0.0035;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2693956 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.928;LDAF=0.3205;AVGPOST=0.9716;RSQ=0.9485;ERATE=0.0045;THETA=0.0008;AC=708;AN=2184 GT:DS:GL:BD 0.32417583 0
1 2693964 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.556;LDAF=0.0224;AVGPOST=0.9709;RSQ=0.4943;ERATE=0.0062;THETA=0.0012;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 2694010 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0229;AVGPOST=0.9996;RSQ=0.9927;ERATE=0.0003;THETA=0.0007;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 2694028 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.725;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7103;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2694065 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.726;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5541;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2694070 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6094;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2694135 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.902;LDAF=0.0080;AVGPOST=0.9968;RSQ=0.8907;ERATE=0.0004;THETA=0.0011;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2694201 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.630;LDAF=0.0111;AVGPOST=0.9931;RSQ=0.7488;ERATE=0.0012;THETA=0.0008;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 2694240 . G GGA 253 PASS INDEL;BAVGPOST=0.996;BRSQ=0.616;LDAF=0.0066;AVGPOST=0.9974;RSQ=0.8223;ERATE=0.0005;THETA=0.0011;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2694321 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4953;ERATE=0.0007;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2694391 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0130;AVGPOST=0.9988;RSQ=0.9620;ERATE=0.0004;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 2694412 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.882;LDAF=0.0085;AVGPOST=0.9986;RSQ=0.9259;ERATE=0.0004;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2694416 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0036;AVGPOST=0.9991;RSQ=0.8861;ERATE=0.0004;THETA=0.0011;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2694496 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3455;AVGPOST=0.9941;RSQ=0.9903;ERATE=0.0004;THETA=0.0004;AC=757;AN=2184 GT:DS:GL:BD 0.34661171 0
1 2694634 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.685;LDAF=0.0035;AVGPOST=0.9971;RSQ=0.6574;ERATE=0.0010;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2694657 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0098;AVGPOST=0.9977;RSQ=0.9123;ERATE=0.0004;THETA=0.0007;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 2694687 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0092;AVGPOST=0.9984;RSQ=0.9338;ERATE=0.0004;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2694717 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0129;AVGPOST=0.9988;RSQ=0.9601;ERATE=0.0005;THETA=0.0008;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 2694723 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.666;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6921;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2694825 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9414;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2694838 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.768;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6918;ERATE=0.0005;THETA=0.0023;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2695002 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.693;LDAF=0.0030;AVGPOST=0.9982;RSQ=0.7431;ERATE=0.0006;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2695052 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0232;AVGPOST=0.9991;RSQ=0.9815;ERATE=0.0004;THETA=0.0011;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 2695164 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.639;LDAF=0.0026;AVGPOST=0.9984;RSQ=0.7452;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2695183 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0043;AVGPOST=0.9987;RSQ=0.8665;ERATE=0.0004;THETA=0.0011;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2695191 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.803;LDAF=0.0088;AVGPOST=0.9973;RSQ=0.8807;ERATE=0.0004;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2695340 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9249;ERATE=0.0004;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2695379 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.900;LDAF=0.0054;AVGPOST=0.9977;RSQ=0.8586;ERATE=0.0003;THETA=0.0009;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2695437 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9670;ERATE=0.0003;THETA=0.0011;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2695520 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9890;ERATE=0.0003;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2695668 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2695687 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4227;AVGPOST=0.9930;RSQ=0.9878;ERATE=0.0014;THETA=0.0005;AC=925;AN=2184 GT:DS:GL:BD 0.42353481 0
1 2695780 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0036;AVGPOST=0.9991;RSQ=0.9156;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2695864 rs112410867 A AT 7913 PASS INDEL;BAVGPOST=0.962;BRSQ=0.820;LDAF=0.1195;AVGPOST=0.9277;RSQ=0.7592;ERATE=0.0198;THETA=0.0004;AC=209;AN=2184 GT:DS:GL:BD 0.09569597 0
1 2695887 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0065;AVGPOST=0.9995;RSQ=0.9667;ERATE=0.0004;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2695906 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0036;AVGPOST=0.9990;RSQ=0.8787;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2695998 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.730;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4649;ERATE=0.0004;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2696011 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.811;LDAF=0.0064;AVGPOST=0.9980;RSQ=0.8749;ERATE=0.0004;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2696015 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0655;AVGPOST=0.9975;RSQ=0.9841;ERATE=0.0005;THETA=0.0009;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 2696024 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0133;AVGPOST=0.9989;RSQ=0.9684;ERATE=0.0004;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 2696067 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0130;AVGPOST=0.9989;RSQ=0.9659;ERATE=0.0003;THETA=0.0008;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 2696068 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0044;AVGPOST=0.9985;RSQ=0.8635;ERATE=0.0004;THETA=0.0012;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2696140 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.676;LDAF=0.0095;AVGPOST=0.9963;RSQ=0.8419;ERATE=0.0004;THETA=0.0011;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2696157 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9013;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2696161 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2696305 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6040;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2696338 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0161;AVGPOST=0.9997;RSQ=0.9917;ERATE=0.0004;THETA=0.0005;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 2696365 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.6539;ERATE=0.0005;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2696507 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.561;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.5594;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2696517 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.756;LDAF=0.0031;AVGPOST=0.9980;RSQ=0.7373;ERATE=0.0004;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2696531 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.740;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5345;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2696571 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.656;LDAF=0.0057;AVGPOST=0.9930;RSQ=0.5029;ERATE=0.0009;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2696582 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.757;LDAF=0.0329;AVGPOST=0.9903;RSQ=0.8791;ERATE=0.0005;THETA=0.0012;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 2696595 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.513;LDAF=0.0059;AVGPOST=0.9961;RSQ=0.7187;ERATE=0.0009;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2696688 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6639;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2696713 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7822;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2696870 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0096;AVGPOST=0.9997;RSQ=0.9841;ERATE=0.0003;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 2696972 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0024;AVGPOST=0.9985;RSQ=0.7341;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2697012 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8448;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2697037 . GT G 102 PASS INDEL;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8152;ERATE=0.0004;THETA=0.0014;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2697043 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0019;AVGPOST=0.9994;RSQ=0.8627;ERATE=0.0004;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2697121 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9524;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2697238 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0129;AVGPOST=0.9999;RSQ=0.9948;ERATE=0.0003;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 2697262 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8260;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2697396 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2697402 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0020;AVGPOST=0.9984;RSQ=0.6755;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2697446 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9236;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2697542 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.968;LDAF=0.0404;AVGPOST=0.9966;RSQ=0.9658;ERATE=0.0004;THETA=0.0004;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 2697556 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0028;AVGPOST=0.9961;RSQ=0.5482;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2697611 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9376;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2697624 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.704;LDAF=0.0025;AVGPOST=0.9961;RSQ=0.4399;ERATE=0.0006;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2697625 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4917;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2697669 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7165;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2697713 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3425;AVGPOST=0.9975;RSQ=0.9957;ERATE=0.0003;THETA=0.0004;AC=748;AN=2184 GT:DS:GL:BD 0.34249085 0
1 2697714 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0098;AVGPOST=0.9994;RSQ=0.9716;ERATE=0.0004;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 2697966 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0081;AVGPOST=0.9993;RSQ=0.9609;ERATE=0.0004;THETA=0.0007;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2698069 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5969;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2698089 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.6522;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2698179 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7230;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2698211 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.905;LDAF=0.0095;AVGPOST=0.9985;RSQ=0.9382;ERATE=0.0003;THETA=0.0009;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 2698220 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2698278 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0657;AVGPOST=0.9997;RSQ=0.9979;ERATE=0.0004;THETA=0.0007;AC=144;AN=2184 GT:DS:GL:BD 0.06593407 0
1 2698309 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7996;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2698357 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0133;AVGPOST=0.9993;RSQ=0.9783;ERATE=0.0004;THETA=0.0009;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2698376 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9863;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2698481 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2698496 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.8059;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2698561 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.7762;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2698621 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0047;AVGPOST=0.9994;RSQ=0.9407;ERATE=0.0004;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2698875 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0065;AVGPOST=0.9992;RSQ=0.9440;ERATE=0.0004;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2698910 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0020;AVGPOST=0.9994;RSQ=0.8656;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2698950 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.4207;AVGPOST=0.9956;RSQ=0.9930;ERATE=0.0005;THETA=0.0004;AC=919;AN=2184 GT:DS:GL:BD 0.42078754 0
1 2699051 rs34425096 TTC T 30231 PASS INDEL;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3449;AVGPOST=0.9833;RSQ=0.9729;ERATE=0.0045;THETA=0.0007;AC=749;AN=2184 GT:DS:GL:BD 0.34294870 0
1 2699127 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0232;AVGPOST=0.9989;RSQ=0.9811;ERATE=0.0004;THETA=0.0009;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 2699153 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6996;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2699172 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2699268 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.8078;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2699335 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=0.9998;RSQ=0.9887;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2699357 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0047;AVGPOST=0.9982;RSQ=0.8661;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2699362 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5805;ERATE=0.0004;THETA=0.0034;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2699649 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8351;AVGPOST=0.9981;RSQ=0.9947;ERATE=0.0003;THETA=0.0010;AC=1825;AN=2184 GT:DS:GL:BD 0.83562273 1
1 2699680 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2699691 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0027;AVGPOST=0.9996;RSQ=0.9404;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2699734 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.671;LDAF=0.0084;AVGPOST=0.9934;RSQ=0.6906;ERATE=0.0010;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2699773 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0080;AVGPOST=0.9992;RSQ=0.9533;ERATE=0.0005;THETA=0.0007;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2699774 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0083;AVGPOST=0.9986;RSQ=0.9422;ERATE=0.0004;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2699825 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.4254;ERATE=0.0005;THETA=0.0027;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2699891 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2699899 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5265;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2699921 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6158;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2699982 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4912;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2699986 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.754;LDAF=0.0039;AVGPOST=0.9985;RSQ=0.8311;ERATE=0.0005;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2700057 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.708;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5514;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2700077 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7534;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2700117 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3455;AVGPOST=0.9947;RSQ=0.9909;ERATE=0.0007;THETA=0.0003;AC=756;AN=2184 GT:DS:GL:BD 0.34615386 0
1 2700184 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.765;LDAF=0.0060;AVGPOST=0.9966;RSQ=0.7620;ERATE=0.0006;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2700215 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0048;AVGPOST=0.9974;RSQ=0.7741;ERATE=0.0006;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2700332 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.633;LDAF=0.0081;AVGPOST=0.9905;RSQ=0.5458;ERATE=0.0013;THETA=0.0015;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2700337 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0163;AVGPOST=0.9982;RSQ=0.9568;ERATE=0.0005;THETA=0.0010;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 2700372 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.961;BRSQ=0.909;LDAF=0.2332;AVGPOST=0.9769;RSQ=0.9512;ERATE=0.0012;THETA=0.0004;AC=502;AN=2184 GT:DS:GL:BD 0.22985348 0
1 2700585 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.459;LDAF=0.0020;AVGPOST=0.9977;RSQ=0.5470;ERATE=0.0006;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2700622 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5670;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2700647 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0130;AVGPOST=0.9996;RSQ=0.9863;ERATE=0.0004;THETA=0.0007;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 2700740 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0034;AVGPOST=0.9975;RSQ=0.7550;ERATE=0.0005;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2700768 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2700834 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.875;LDAF=0.0175;AVGPOST=0.9965;RSQ=0.9243;ERATE=0.0004;THETA=0.0006;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 2700969 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0652;AVGPOST=0.9990;RSQ=0.9936;ERATE=0.0004;THETA=0.0006;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 2700988 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.746;LDAF=0.0018;AVGPOST=0.9977;RSQ=0.4832;ERATE=0.0006;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2701090 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0080;AVGPOST=0.9979;RSQ=0.8832;ERATE=0.0004;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2701112 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.968;LDAF=0.0656;AVGPOST=0.9979;RSQ=0.9876;ERATE=0.0005;THETA=0.0003;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 2701400 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0066;AVGPOST=0.9992;RSQ=0.9476;ERATE=0.0004;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2701427 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9990;AVGPOST=0.9980;RSQ=0.1163;ERATE=0.0005;THETA=0.0004;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 2701432 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.734;LDAF=0.0032;AVGPOST=0.9971;RSQ=0.6313;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2701506 rs70956336 GCTCTGGGCCA G 15598 PASS INDEL;BAVGPOST=0.977;BRSQ=0.953;LDAF=0.3421;AVGPOST=0.9792;RSQ=0.9649;ERATE=0.0012;THETA=0.0008;AC=750;AN=2184 GT:DS:GL:BD 0.34340659 0
1 2701535 . CGCTCTGGGCT C 32502 PASS INDEL;BAVGPOST=0.837;BRSQ=0.405;LDAF=0.7737;AVGPOST=0.7653;RSQ=0.4206;ERATE=0.0672;THETA=0.0005;AC=1870;AN=2184 GT:DS:GL:BD 0.85622710 1
1 2701545 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.933;BRSQ=0.671;LDAF=0.1465;AVGPOST=0.8870;RSQ=0.6284;ERATE=0.0217;THETA=0.0032;AC=233;AN=2184 GT:DS:GL:BD 0.10668498 0
1 2701555 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.913;BRSQ=0.625;LDAF=0.1752;AVGPOST=0.8555;RSQ=0.5721;ERATE=0.0296;THETA=0.0003;AC=278;AN=2184 GT:DS:GL:BD 0.12728938 0
1 2701681 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.842;LDAF=0.0133;AVGPOST=0.9939;RSQ=0.8269;ERATE=0.0004;THETA=0.0012;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 2701749 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.808;LDAF=0.0049;AVGPOST=0.9973;RSQ=0.7802;ERATE=0.0004;THETA=0.0011;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2701799 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0654;AVGPOST=0.9979;RSQ=0.9863;ERATE=0.0004;THETA=0.0004;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 2701816 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.8333;AVGPOST=0.9956;RSQ=0.9879;ERATE=0.0006;THETA=0.0034;AC=1824;AN=2184 GT:DS:GL:BD 0.83516484 1
1 2702001 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.603;LDAF=0.0021;AVGPOST=0.9967;RSQ=0.3920;ERATE=0.0008;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2702110 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.637;LDAF=0.0048;AVGPOST=0.9963;RSQ=0.7002;ERATE=0.0005;THETA=0.0011;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2702133 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0086;AVGPOST=0.9981;RSQ=0.9058;ERATE=0.0006;THETA=0.0016;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2702167 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.703;LDAF=0.0072;AVGPOST=0.9951;RSQ=0.7260;ERATE=0.0007;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2702231 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0522;AVGPOST=0.9994;RSQ=0.9954;ERATE=0.0004;THETA=0.0007;AC=114;AN=2184 GT:DS:GL:BD 0.05219780 0
1 2702371 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0022;AVGPOST=0.9968;RSQ=0.3896;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2702372 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0514;AVGPOST=0.9985;RSQ=0.9886;ERATE=0.0004;THETA=0.0006;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 2702442 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.860;LDAF=0.0058;AVGPOST=0.9950;RSQ=0.6760;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2702444 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.804;LDAF=0.0034;AVGPOST=0.9965;RSQ=0.6230;ERATE=0.0004;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2702487 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.569;LDAF=0.0037;AVGPOST=0.9944;RSQ=0.4008;ERATE=0.0007;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2702520 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.625;LDAF=0.0027;AVGPOST=0.9954;RSQ=0.3507;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2702595 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0142;AVGPOST=0.9997;RSQ=0.9859;ERATE=0.0004;THETA=0.0009;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 2702661 . CT C 284 PASS INDEL;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0082;AVGPOST=0.9945;RSQ=0.7254;ERATE=0.0006;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2702730 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0023;AVGPOST=0.9972;RSQ=0.5091;ERATE=0.0006;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2702758 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.692;LDAF=0.0028;AVGPOST=0.9981;RSQ=0.7012;ERATE=0.0006;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2702801 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.808;LDAF=0.0049;AVGPOST=0.9973;RSQ=0.7760;ERATE=0.0006;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2702863 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.805;LDAF=0.0043;AVGPOST=0.9963;RSQ=0.6577;ERATE=0.0006;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2703018 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0160;AVGPOST=0.9991;RSQ=0.9774;ERATE=0.0004;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 2703048 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.639;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4489;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2703080 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.686;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4140;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2703103 rs35024324 ACT A 377 PASS INDEL;BAVGPOST=0.995;BRSQ=0.628;LDAF=0.0120;AVGPOST=0.9923;RSQ=0.7466;ERATE=0.0009;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 2703107 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.965;LDAF=0.3896;AVGPOST=0.9895;RSQ=0.9825;ERATE=0.0004;THETA=0.0009;AC=853;AN=2184 GT:DS:GL:BD 0.39056778 0
1 2703157 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0178;AVGPOST=0.9971;RSQ=0.9356;ERATE=0.0006;THETA=0.0008;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 2703199 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4628;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2703235 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.742;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7458;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2703258 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.681;LDAF=0.0032;AVGPOST=0.9946;RSQ=0.2988;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2703259 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.660;LDAF=0.0041;AVGPOST=0.9974;RSQ=0.7327;ERATE=0.0007;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2703318 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0130;AVGPOST=0.9995;RSQ=0.9812;ERATE=0.0004;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 2703438 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8344;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2703453 . AAGG A 190 PASS INDEL;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.6865;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2703467 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0086;AVGPOST=0.9992;RSQ=0.9547;ERATE=0.0005;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2703486 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.986;LDAF=0.0527;AVGPOST=0.9983;RSQ=0.9867;ERATE=0.0006;THETA=0.0004;AC=114;AN=2184 GT:DS:GL:BD 0.05219780 0
1 2703775 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6141;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2703806 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0032;AVGPOST=0.9982;RSQ=0.7674;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2703894 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7588;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2703963 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.3476;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2704054 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.615;LDAF=0.0045;AVGPOST=0.9957;RSQ=0.6401;ERATE=0.0006;THETA=0.0016;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2704055 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.855;LDAF=0.0067;AVGPOST=0.9968;RSQ=0.8239;ERATE=0.0004;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 2704112 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0664;AVGPOST=0.9944;RSQ=0.9678;ERATE=0.0014;THETA=0.0009;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 2704125 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.938;LDAF=0.0240;AVGPOST=0.9921;RSQ=0.8706;ERATE=0.0006;THETA=0.0005;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 2704226 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.3888;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2704254 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.755;LDAF=0.0110;AVGPOST=0.9979;RSQ=0.9203;ERATE=0.0005;THETA=0.0007;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 2704362 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8321;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2704444 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.778;LDAF=0.0067;AVGPOST=0.9976;RSQ=0.8493;ERATE=0.0005;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2704471 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3423;AVGPOST=0.9971;RSQ=0.9948;ERATE=0.0004;THETA=0.0006;AC=749;AN=2184 GT:DS:GL:BD 0.34294870 0
1 2704474 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0648;AVGPOST=0.9995;RSQ=0.9966;ERATE=0.0004;THETA=0.0003;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 2704567 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.730;LDAF=0.0004;AVGPOST=0.9992;RSQ=0.2244;ERATE=0.0004;THETA=0.0007;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 2704698 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.951;LDAF=0.0267;AVGPOST=0.9982;RSQ=0.9706;ERATE=0.0004;THETA=0.0005;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 2704835 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9375;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2704918 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.975;LDAF=0.1426;AVGPOST=0.9956;RSQ=0.9868;ERATE=0.0009;THETA=0.0006;AC=309;AN=2184 GT:DS:GL:BD 0.14148352 0
1 2704931 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.423;LDAF=0.0028;AVGPOST=0.9961;RSQ=0.4104;ERATE=0.0020;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2704963 . TTG T 22 PASS INDEL;BAVGPOST=0.997;BRSQ=0.636;LDAF=0.0049;AVGPOST=0.9934;RSQ=0.4772;ERATE=0.0023;THETA=0.0027;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2705038 . TG T 831 PASS INDEL;BAVGPOST=0.990;BRSQ=0.922;LDAF=0.0561;AVGPOST=0.9962;RSQ=0.9729;ERATE=0.0005;THETA=0.0006;AC=123;AN=2184 GT:DS:GL:BD 0.05631868 0
1 2705039 rs111933268 GC G 6020 PASS INDEL;BAVGPOST=0.995;BRSQ=0.962;LDAF=0.0651;AVGPOST=0.9974;RSQ=0.9824;ERATE=0.0007;THETA=0.0004;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 2705043 . CT C 689 PASS INDEL;BAVGPOST=0.991;BRSQ=0.934;LDAF=0.0597;AVGPOST=0.9955;RSQ=0.9722;ERATE=0.0005;THETA=0.0005;AC=129;AN=2184 GT:DS:GL:BD 0.05906593 0
1 2705068 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0025;AVGPOST=0.9989;RSQ=0.8457;ERATE=0.0003;THETA=0.0029;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2705279 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8311;ERATE=0.0005;THETA=0.0015;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2705354 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5038;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2705456 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.730;LDAF=0.0023;AVGPOST=0.9981;RSQ=0.6592;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2705542 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.631;LDAF=0.0038;AVGPOST=0.9958;RSQ=0.5826;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2705715 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.966;LDAF=0.0269;AVGPOST=0.9921;RSQ=0.8888;ERATE=0.0009;THETA=0.0005;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 2705775 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.796;LDAF=0.0036;AVGPOST=0.9991;RSQ=0.8902;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2705873 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0146;AVGPOST=0.9980;RSQ=0.9392;ERATE=0.0006;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 2706136 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.399;LDAF=0.0063;AVGPOST=0.9915;RSQ=0.4489;ERATE=0.0006;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2706361 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.879;LDAF=0.0722;AVGPOST=0.9698;RSQ=0.8444;ERATE=0.0012;THETA=0.0003;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 2706645 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.967;BRSQ=0.353;LDAF=0.0325;AVGPOST=0.9649;RSQ=0.5916;ERATE=0.0016;THETA=0.0006;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 2707023 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0035;AVGPOST=0.9968;RSQ=0.5965;ERATE=0.0006;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2707222 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0031;AVGPOST=0.9983;RSQ=0.7695;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2707438 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.985;LDAF=0.3402;AVGPOST=0.9935;RSQ=0.9887;ERATE=0.0009;THETA=0.0003;AC=746;AN=2184 GT:DS:GL:BD 0.34157509 0
1 2707710 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.980;LDAF=0.0631;AVGPOST=0.9893;RSQ=0.9335;ERATE=0.0009;THETA=0.0004;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 2707900 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.445;LDAF=0.0272;AVGPOST=0.9629;RSQ=0.4677;ERATE=0.0088;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 2707918 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.750;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.5301;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2707957 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.919;LDAF=0.0527;AVGPOST=0.9930;RSQ=0.9469;ERATE=0.0004;THETA=0.0005;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 2708004 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6710;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2708082 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0020;AVGPOST=0.9983;RSQ=0.6417;ERATE=0.0004;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2708087 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0066;AVGPOST=0.9958;RSQ=0.7642;ERATE=0.0004;THETA=0.0025;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2708276 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0040;AVGPOST=0.9984;RSQ=0.8640;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2708280 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0580;AVGPOST=0.9995;RSQ=0.9961;ERATE=0.0004;THETA=0.0009;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 2708286 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0129;AVGPOST=0.9998;RSQ=0.9931;ERATE=0.0003;THETA=0.0006;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 2708291 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0037;AVGPOST=0.9968;RSQ=0.6972;ERATE=0.0004;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2708340 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.837;LDAF=0.0119;AVGPOST=0.9971;RSQ=0.9065;ERATE=0.0004;THETA=0.0008;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 2708430 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4222;AVGPOST=0.9975;RSQ=0.9958;ERATE=0.0005;THETA=0.0009;AC=921;AN=2184 GT:DS:GL:BD 0.42170331 0
1 2708472 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0255;AVGPOST=0.9996;RSQ=0.9940;ERATE=0.0003;THETA=0.0006;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 2708474 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0069;AVGPOST=0.9979;RSQ=0.8926;ERATE=0.0004;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 2708502 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9233;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2708503 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0085;AVGPOST=0.9994;RSQ=0.9668;ERATE=0.0003;THETA=0.0008;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2708518 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0572;AVGPOST=0.9995;RSQ=0.9956;ERATE=0.0004;THETA=0.0006;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 2708598 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.920;BRSQ=0.811;LDAF=0.3646;AVGPOST=0.8774;RSQ=0.7625;ERATE=0.0383;THETA=0.0002;AC=785;AN=2184 GT:DS:GL:BD 0.35943222 0
1 2708650 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.794;LDAF=0.0149;AVGPOST=0.9965;RSQ=0.9028;ERATE=0.0005;THETA=0.0007;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 2708747 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0573;AVGPOST=0.9996;RSQ=0.9967;ERATE=0.0004;THETA=0.0004;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 2708771 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0048;AVGPOST=0.9993;RSQ=0.9328;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2708810 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0131;AVGPOST=0.9994;RSQ=0.9782;ERATE=0.0003;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 2708994 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2709164 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4194;AVGPOST=0.9964;RSQ=0.9941;ERATE=0.0006;THETA=0.0010;AC=915;AN=2184 GT:DS:GL:BD 0.41895604 0
1 2709205 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0159;AVGPOST=0.9994;RSQ=0.9841;ERATE=0.0003;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 2709215 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8125;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2709249 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5940;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2709275 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5835;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2709296 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.745;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6620;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2709352 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2709364 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0137;AVGPOST=0.9983;RSQ=0.9551;ERATE=0.0004;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2709392 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3513;AVGPOST=0.9976;RSQ=0.9961;ERATE=0.0006;THETA=0.0007;AC=767;AN=2184 GT:DS:GL:BD 0.35119048 0
1 2709524 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7463;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2709576 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3417;AVGPOST=0.9990;RSQ=0.9982;ERATE=0.0004;THETA=0.0002;AC=746;AN=2184 GT:DS:GL:BD 0.34157509 0
1 2709731 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5926;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2709989 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0036;AVGPOST=0.9990;RSQ=0.8863;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2710002 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.3537;AVGPOST=0.9971;RSQ=0.9945;ERATE=0.0008;THETA=0.0005;AC=773;AN=2184 GT:DS:GL:BD 0.35393772 0
1 2710003 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4621;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2710131 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0023;AVGPOST=0.9985;RSQ=0.6962;ERATE=0.0004;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2710271 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0019;AVGPOST=0.9978;RSQ=0.5698;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2710377 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3441;AVGPOST=0.9980;RSQ=0.9963;ERATE=0.0007;THETA=0.0006;AC=751;AN=2184 GT:DS:GL:BD 0.34386447 0
1 2710425 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2710447 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9865;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2710706 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9321;ERATE=0.0003;THETA=0.0032;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2710714 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0157;AVGPOST=0.9998;RSQ=0.9939;ERATE=0.0003;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 2710891 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4590;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2710895 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0288;AVGPOST=0.9997;RSQ=0.9958;ERATE=0.0003;THETA=0.0014;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 2710909 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0018;AVGPOST=0.9995;RSQ=0.8723;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2710964 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0033;AVGPOST=0.9996;RSQ=0.9476;ERATE=0.0003;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2711031 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9019;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2711198 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0018;AVGPOST=0.9966;RSQ=0.2309;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2711384 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0013;AVGPOST=0.9994;RSQ=0.7905;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2711428 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.799;LDAF=0.0052;AVGPOST=0.9980;RSQ=0.8516;ERATE=0.0004;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2711502 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.934;LDAF=0.0163;AVGPOST=0.9969;RSQ=0.9321;ERATE=0.0006;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 2711511 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0018;AVGPOST=0.9974;RSQ=0.4995;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2711534 . GT G 1868 PASS INDEL;BAVGPOST=0.998;BRSQ=0.939;LDAF=0.0154;AVGPOST=0.9994;RSQ=0.9833;ERATE=0.0004;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 2711585 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0004;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2711630 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.712;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8210;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2711631 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.979;LDAF=0.0707;AVGPOST=0.9920;RSQ=0.9489;ERATE=0.0005;THETA=0.0006;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 2711633 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0287;AVGPOST=0.9988;RSQ=0.9819;ERATE=0.0005;THETA=0.0006;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 2711639 . A AC 42 PASS INDEL;BAVGPOST=0.999;BRSQ=0.614;LDAF=0.0028;AVGPOST=0.9983;RSQ=0.7535;ERATE=0.0005;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2711786 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.6844;ERATE=0.0005;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2711927 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.551;LDAF=0.0211;AVGPOST=0.9737;RSQ=0.5069;ERATE=0.0070;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 2711981 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0023;AVGPOST=0.9981;RSQ=0.6795;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2711985 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8155;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2712057 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0161;AVGPOST=0.9992;RSQ=0.9852;ERATE=0.0003;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 2712104 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0031;AVGPOST=0.9983;RSQ=0.7653;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2712115 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.666;LDAF=0.0082;AVGPOST=0.9979;RSQ=0.8841;ERATE=0.0006;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2712128 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0032;AVGPOST=0.9971;RSQ=0.6630;ERATE=0.0007;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2712170 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.3540;AVGPOST=0.9962;RSQ=0.9934;ERATE=0.0005;THETA=0.0006;AC=773;AN=2184 GT:DS:GL:BD 0.35393772 0
1 2712178 . G GT 21 PASS INDEL;BAVGPOST=1.000;BRSQ=0.777;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7125;ERATE=0.0004;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2712191 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5790;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2712404 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0096;AVGPOST=0.9995;RSQ=0.9781;ERATE=0.0004;THETA=0.0007;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 2712563 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.762;LDAF=0.0010;AVGPOST=0.9987;RSQ=0.4934;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2712674 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5951;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2712680 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4641;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2712732 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0016;AVGPOST=0.9981;RSQ=0.5314;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2712782 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0156;AVGPOST=0.9998;RSQ=0.9940;ERATE=0.0003;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 2712841 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0044;AVGPOST=0.9981;RSQ=0.8244;ERATE=0.0006;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2712886 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6281;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2712937 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9799;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2713070 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0023;AVGPOST=0.9981;RSQ=0.6789;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2713073 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.587;LDAF=0.0020;AVGPOST=0.9994;RSQ=0.8748;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2713247 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0094;AVGPOST=0.9929;RSQ=0.7202;ERATE=0.0008;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2713300 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4876;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2713327 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3548;AVGPOST=0.9963;RSQ=0.9936;ERATE=0.0005;THETA=0.0005;AC=775;AN=2184 GT:DS:GL:BD 0.35485348 0
1 2713332 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8125;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2713394 . C CA 12239 PASS INDEL;BAVGPOST=0.984;BRSQ=0.920;LDAF=0.0752;AVGPOST=0.9895;RSQ=0.9380;ERATE=0.0006;THETA=0.0010;AC=163;AN=2184 GT:DS:GL:BD 0.07463370 0
1 2713450 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8609;ERATE=0.0003;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2713471 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6112;ERATE=0.0005;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2713512 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.7013;ERATE=0.0003;THETA=0.0022;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2713586 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0027;AVGPOST=0.9974;RSQ=0.7283;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2713596 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.5806;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2713666 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0038;AVGPOST=0.9988;RSQ=0.8639;ERATE=0.0004;THETA=0.0012;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2713671 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.557;LDAF=0.0018;AVGPOST=0.9985;RSQ=0.6713;ERATE=0.0004;THETA=0.0015;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2713852 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8156;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2713960 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8210;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2713979 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5963;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2714025 . A AC 2259 PASS INDEL;BAVGPOST=0.986;BRSQ=0.770;LDAF=0.0286;AVGPOST=0.9880;RSQ=0.8474;ERATE=0.0005;THETA=0.0004;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 2714059 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.909;LDAF=0.0031;AVGPOST=0.9996;RSQ=0.9475;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2714061 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0303;AVGPOST=0.9991;RSQ=0.9864;ERATE=0.0004;THETA=0.0005;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 2714157 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.929;LDAF=0.0816;AVGPOST=0.9926;RSQ=0.9652;ERATE=0.0004;THETA=0.0031;AC=179;AN=2184 GT:DS:GL:BD 0.08195971 0
1 2714218 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6122;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2714300 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0024;AVGPOST=0.9971;RSQ=0.4971;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2714413 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.8819;ERATE=0.0008;THETA=0.0030;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2714437 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5218;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2714557 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7101;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2714633 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.604;LDAF=0.0040;AVGPOST=0.9961;RSQ=0.5493;ERATE=0.0006;THETA=0.0013;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2714772 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.793;BRSQ=0.156;LDAF=0.2128;AVGPOST=0.7343;RSQ=0.3268;ERATE=0.0259;THETA=0.0007;AC=262;AN=2184 GT:DS:GL:BD 0.11996337 0
1 2714777 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.714;BRSQ=0.302;LDAF=0.2767;AVGPOST=0.7619;RSQ=0.5180;ERATE=0.0140;THETA=0.0016;AC=514;AN=2184 GT:DS:GL:BD 0.23534799 0
1 2714825 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.866;BRSQ=0.189;LDAF=0.1824;AVGPOST=0.7495;RSQ=0.2948;ERATE=0.0261;THETA=0.0006;AC=193;AN=2184 GT:DS:GL:BD 0.08836997 0
1 2714963 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.311;LDAF=0.0191;AVGPOST=0.9892;RSQ=0.7690;ERATE=0.0009;THETA=0.0006;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 2714976 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.915;BRSQ=0.331;LDAF=0.1419;AVGPOST=0.8145;RSQ=0.3807;ERATE=0.0224;THETA=0.0007;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 2715090 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.289;LDAF=0.9838;AVGPOST=0.9831;RSQ=0.5769;ERATE=0.0015;THETA=0.0010;AC=2152;AN=2184 GT:DS:GL:BD 0.98534799 1
1 2715148 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.805;BRSQ=0.207;LDAF=0.2234;AVGPOST=0.7219;RSQ=0.3213;ERATE=0.0380;THETA=0.0044;AC=264;AN=2184 GT:DS:GL:BD 0.12087912 0
1 2715252 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.833;BRSQ=0.199;LDAF=0.1999;AVGPOST=0.7307;RSQ=0.2855;ERATE=0.0418;THETA=0.0034;AC=203;AN=2184 GT:DS:GL:BD 0.09294872 0
1 2715268 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.853;BRSQ=0.233;LDAF=0.1808;AVGPOST=0.7613;RSQ=0.3229;ERATE=0.0317;THETA=0.0008;AC=194;AN=2184 GT:DS:GL:BD 0.08882784 0
1 2715327 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.917;BRSQ=0.275;LDAF=0.1103;AVGPOST=0.8533;RSQ=0.3905;ERATE=0.0182;THETA=0.0029;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 2715431 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.910;BRSQ=0.353;LDAF=0.1166;AVGPOST=0.8617;RSQ=0.4640;ERATE=0.0168;THETA=0.0006;AC=148;AN=2184 GT:DS:GL:BD 0.06776557 0
1 2715440 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.890;BRSQ=0.375;LDAF=0.1666;AVGPOST=0.7924;RSQ=0.3763;ERATE=0.0306;THETA=0.0017;AC=203;AN=2184 GT:DS:GL:BD 0.09294872 0
1 2715479 . CAAGCCTCG C 328 PASS INDEL;BAVGPOST=0.908;BRSQ=0.294;LDAF=0.0767;AVGPOST=0.9181;RSQ=0.5533;ERATE=0.0024;THETA=0.0005;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 2715480 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.871;BRSQ=0.288;LDAF=0.1861;AVGPOST=0.7660;RSQ=0.3632;ERATE=0.0257;THETA=0.0006;AC=219;AN=2184 GT:DS:GL:BD 0.10027473 0
1 2715480 . AAGCCTCGC A 86 PASS INDEL;BAVGPOST=0.971;BRSQ=0.225;LDAF=0.0407;AVGPOST=0.9410;RSQ=0.4341;ERATE=0.0007;THETA=0.0005;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 2715487 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.964;BRSQ=0.892;LDAF=0.7673;AVGPOST=0.8456;RSQ=0.6595;ERATE=0.0167;THETA=0.0011;AC=1764;AN=2184 GT:DS:GL:BD 0.80769229 1
1 2715511 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.858;BRSQ=0.290;LDAF=0.1922;AVGPOST=0.7563;RSQ=0.3461;ERATE=0.0405;THETA=0.0005;AC=214;AN=2184 GT:DS:GL:BD 0.09798535 0
1 2715575 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.939;BRSQ=0.341;LDAF=0.0983;AVGPOST=0.8633;RSQ=0.3727;ERATE=0.0179;THETA=0.0005;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 2715680 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0117;AVGPOST=0.9941;RSQ=0.7826;ERATE=0.0006;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2715688 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.504;LDAF=0.0056;AVGPOST=0.9922;RSQ=0.4200;ERATE=0.0008;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2715720 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.704;LDAF=0.0149;AVGPOST=0.9919;RSQ=0.7838;ERATE=0.0005;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 2715724 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0024;AVGPOST=0.9980;RSQ=0.6209;ERATE=0.0007;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2715827 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.6280;ERATE=0.0004;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2715834 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.5521;ERATE=0.0004;THETA=0.0031;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2715994 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0137;AVGPOST=0.9980;RSQ=0.9441;ERATE=0.0004;THETA=0.0010;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 2716048 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.517;LDAF=0.0019;AVGPOST=0.9970;RSQ=0.3838;ERATE=0.0007;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2716056 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.741;LDAF=0.0040;AVGPOST=0.9971;RSQ=0.7104;ERATE=0.0007;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2716108 . C CA 518 PASS INDEL;BAVGPOST=0.943;BRSQ=0.501;LDAF=0.1013;AVGPOST=0.8779;RSQ=0.4468;ERATE=0.0256;THETA=0.0005;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 2716242 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0307;AVGPOST=0.9983;RSQ=0.9820;ERATE=0.0004;THETA=0.0003;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 2716294 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0243;AVGPOST=0.9985;RSQ=0.9734;ERATE=0.0005;THETA=0.0003;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 2716624 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4193;AVGPOST=0.9936;RSQ=0.9885;ERATE=0.0005;THETA=0.0008;AC=917;AN=2184 GT:DS:GL:BD 0.41987181 0
1 2716762 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.494;LDAF=0.0065;AVGPOST=0.9915;RSQ=0.5011;ERATE=0.0005;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2716787 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.668;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.5889;ERATE=0.0005;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2716881 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.540;LDAF=0.0047;AVGPOST=0.9938;RSQ=0.4762;ERATE=0.0012;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2716907 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.989;LDAF=0.3534;AVGPOST=0.9915;RSQ=0.9853;ERATE=0.0008;THETA=0.0033;AC=771;AN=2184 GT:DS:GL:BD 0.35302198 0
1 2717043 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6041;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2717048 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.507;LDAF=0.0087;AVGPOST=0.9882;RSQ=0.4879;ERATE=0.0010;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2717096 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0231;AVGPOST=0.9985;RSQ=0.9740;ERATE=0.0005;THETA=0.0004;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 2717423 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0094;AVGPOST=0.9983;RSQ=0.9185;ERATE=0.0005;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2717470 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.982;LDAF=0.3929;AVGPOST=0.9868;RSQ=0.9780;ERATE=0.0006;THETA=0.0003;AC=858;AN=2184 GT:DS:GL:BD 0.39285713 0
1 2717687 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0168;AVGPOST=0.9958;RSQ=0.9043;ERATE=0.0006;THETA=0.0005;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 2717833 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0037;AVGPOST=0.9964;RSQ=0.6418;ERATE=0.0005;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2717922 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.519;LDAF=0.0055;AVGPOST=0.9938;RSQ=0.5160;ERATE=0.0010;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2717960 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.895;LDAF=0.0271;AVGPOST=0.9952;RSQ=0.9233;ERATE=0.0004;THETA=0.0005;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 2718025 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.834;LDAF=0.0264;AVGPOST=0.9916;RSQ=0.8715;ERATE=0.0004;THETA=0.0013;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 2718113 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.735;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.6101;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2718169 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.412;LDAF=0.0047;AVGPOST=0.9954;RSQ=0.5915;ERATE=0.0010;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2718266 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.696;LDAF=0.0025;AVGPOST=0.9969;RSQ=0.5179;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2718370 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.551;LDAF=0.0122;AVGPOST=0.9872;RSQ=0.5852;ERATE=0.0010;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 2718449 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0029;AVGPOST=0.9979;RSQ=0.6749;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2718490 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.8304;AVGPOST=0.9924;RSQ=0.9779;ERATE=0.0012;THETA=0.0008;AC=1817;AN=2184 GT:DS:GL:BD 0.83195972 1
1 2718589 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.404;LDAF=0.0043;AVGPOST=0.9945;RSQ=0.4801;ERATE=0.0010;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2718694 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.871;LDAF=0.0218;AVGPOST=0.9924;RSQ=0.8784;ERATE=0.0008;THETA=0.0010;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 2718704 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0177;AVGPOST=0.9952;RSQ=0.8975;ERATE=0.0006;THETA=0.0008;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 2718824 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.596;LDAF=0.0102;AVGPOST=0.9920;RSQ=0.6887;ERATE=0.0011;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2719016 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.854;LDAF=0.0277;AVGPOST=0.9824;RSQ=0.7481;ERATE=0.0008;THETA=0.0011;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 2719031 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.873;LDAF=0.0082;AVGPOST=0.9980;RSQ=0.9044;ERATE=0.0004;THETA=0.0008;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2719302 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.982;LDAF=0.8379;AVGPOST=0.9906;RSQ=0.9729;ERATE=0.0012;THETA=0.0007;AC=1836;AN=2184 GT:DS:GL:BD 0.84065932 1
1 2719321 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.801;LDAF=0.0102;AVGPOST=0.9908;RSQ=0.6550;ERATE=0.0006;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2719449 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.681;LDAF=0.0066;AVGPOST=0.9933;RSQ=0.5811;ERATE=0.0011;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2719545 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0225;AVGPOST=0.9995;RSQ=0.9906;ERATE=0.0004;THETA=0.0012;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 2719583 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5569;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2719586 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5274;ERATE=0.0005;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2719617 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0043;AVGPOST=0.9974;RSQ=0.7414;ERATE=0.0006;THETA=0.0011;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2719656 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.708;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.6900;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2719727 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.702;LDAF=0.0068;AVGPOST=0.9943;RSQ=0.6947;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2719864 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.743;LDAF=0.0063;AVGPOST=0.9984;RSQ=0.8993;ERATE=0.0005;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2719904 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.3528;AVGPOST=0.9926;RSQ=0.9867;ERATE=0.0006;THETA=0.0009;AC=769;AN=2184 GT:DS:GL:BD 0.35210621 0
1 2719923 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8807;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2719953 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.801;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7431;ERATE=0.0004;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2720006 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0038;AVGPOST=0.9988;RSQ=0.8836;ERATE=0.0003;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2720017 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5516;ERATE=0.0004;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2720018 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6282;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2720019 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5369;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2720086 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.867;LDAF=0.0028;AVGPOST=0.9986;RSQ=0.7677;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2720087 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0129;AVGPOST=0.9998;RSQ=0.9931;ERATE=0.0003;THETA=0.0008;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 2720110 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0061;AVGPOST=0.9983;RSQ=0.8866;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2720173 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.968;LDAF=0.4306;AVGPOST=0.9869;RSQ=0.9798;ERATE=0.0005;THETA=0.0007;AC=943;AN=2184 GT:DS:GL:BD 0.43177655 0
1 2720175 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.966;LDAF=0.4311;AVGPOST=0.9880;RSQ=0.9811;ERATE=0.0004;THETA=0.0021;AC=945;AN=2184 GT:DS:GL:BD 0.43269232 0
1 2720222 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.832;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.6432;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2720281 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.776;LDAF=0.0013;AVGPOST=0.9994;RSQ=0.7905;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2720472 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9311;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2720621 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.747;LDAF=0.0031;AVGPOST=0.9956;RSQ=0.4260;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2720831 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.780;LDAF=0.0046;AVGPOST=0.9987;RSQ=0.8761;ERATE=0.0004;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2720841 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6189;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2720861 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4767;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2720862 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.783;LDAF=0.0087;AVGPOST=0.9949;RSQ=0.7820;ERATE=0.0003;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2721024 . G GC 1230 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0179;AVGPOST=0.9988;RSQ=0.9678;ERATE=0.0004;THETA=0.0011;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 2721104 . C CAAA 67 PASS INDEL;BAVGPOST=1.000;BRSQ=0.756;LDAF=0.0022;AVGPOST=0.9981;RSQ=0.6125;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2721148 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.863;LDAF=0.0334;AVGPOST=0.9835;RSQ=0.8022;ERATE=0.0038;THETA=0.0012;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 2721149 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.4191;AVGPOST=0.9854;RSQ=0.9758;ERATE=0.0013;THETA=0.0007;AC=915;AN=2184 GT:DS:GL:BD 0.41895604 0
1 2721306 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.816;LDAF=0.0134;AVGPOST=0.9935;RSQ=0.8147;ERATE=0.0006;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 2721393 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.534;LDAF=0.0020;AVGPOST=0.9971;RSQ=0.4582;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2721431 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.739;LDAF=0.0066;AVGPOST=0.9957;RSQ=0.7779;ERATE=0.0004;THETA=0.0010;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2721451 . CT C 247 PASS INDEL;BAVGPOST=0.996;BRSQ=0.578;LDAF=0.0050;AVGPOST=0.9952;RSQ=0.5767;ERATE=0.0007;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2721457 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.915;LDAF=0.0134;AVGPOST=0.9974;RSQ=0.9247;ERATE=0.0004;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2721521 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0134;AVGPOST=0.9983;RSQ=0.9385;ERATE=0.0004;THETA=0.0007;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 2721551 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.739;LDAF=0.0134;AVGPOST=0.9965;RSQ=0.8959;ERATE=0.0005;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 2721576 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.8331;AVGPOST=0.9931;RSQ=0.9808;ERATE=0.0006;THETA=0.0005;AC=1821;AN=2184 GT:DS:GL:BD 0.83379120 1
1 2721803 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.834;LDAF=0.0051;AVGPOST=0.9938;RSQ=0.5626;ERATE=0.0006;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2721817 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.944;LDAF=0.0122;AVGPOST=0.9982;RSQ=0.9351;ERATE=0.0006;THETA=0.0060;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 2721925 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.725;LDAF=0.0083;AVGPOST=0.9901;RSQ=0.5142;ERATE=0.0007;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2722020 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0100;AVGPOST=0.9964;RSQ=0.8495;ERATE=0.0006;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2722164 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.589;LDAF=0.0050;AVGPOST=0.9945;RSQ=0.5682;ERATE=0.0017;THETA=0.0019;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2722165 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.853;LDAF=0.0281;AVGPOST=0.9918;RSQ=0.8950;ERATE=0.0004;THETA=0.0006;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 2722242 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0104;AVGPOST=0.9973;RSQ=0.9071;ERATE=0.0006;THETA=0.0094;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 2722313 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.653;LDAF=0.0134;AVGPOST=0.9875;RSQ=0.6262;ERATE=0.0007;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2722319 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.659;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.4043;ERATE=0.0004;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2722421 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0188;AVGPOST=0.9970;RSQ=0.9399;ERATE=0.0005;THETA=0.0066;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 2722445 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0026;AVGPOST=0.9985;RSQ=0.7586;ERATE=0.0004;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2722474 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.674;LDAF=0.0033;AVGPOST=0.9974;RSQ=0.6592;ERATE=0.0006;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2722475 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0067;AVGPOST=0.9994;RSQ=0.9614;ERATE=0.0004;THETA=0.0010;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2722501 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.777;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.4051;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2722606 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.584;LDAF=0.0024;AVGPOST=0.9969;RSQ=0.4550;ERATE=0.0006;THETA=0.0109;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2722635 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.597;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8313;ERATE=0.0004;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2722645 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0069;AVGPOST=0.9989;RSQ=0.9339;ERATE=0.0004;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2722649 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0025;AVGPOST=0.9988;RSQ=0.8090;ERATE=0.0004;THETA=0.0035;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2722739 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7292;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2722755 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5867;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2722822 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.948;LDAF=0.1143;AVGPOST=0.9880;RSQ=0.9534;ERATE=0.0005;THETA=0.0025;AC=247;AN=2184 GT:DS:GL:BD 0.11309524 0
1 2722848 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.984;LDAF=0.3623;AVGPOST=0.9807;RSQ=0.9711;ERATE=0.0025;THETA=0.0008;AC=785;AN=2184 GT:DS:GL:BD 0.35943222 0
1 2722900 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0174;AVGPOST=0.9989;RSQ=0.9727;ERATE=0.0005;THETA=0.0014;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 2722944 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7183;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2722950 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.760;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.8013;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2723049 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9602;ERATE=0.0003;THETA=0.0057;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2723068 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0097;AVGPOST=0.9999;RSQ=0.9931;ERATE=0.0003;THETA=0.0008;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 2723070 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4286;ERATE=0.0003;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2723117 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.878;LDAF=0.0118;AVGPOST=0.9939;RSQ=0.8037;ERATE=0.0007;THETA=0.0024;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 2723135 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7025;ERATE=0.0004;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2723154 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0065;AVGPOST=0.9984;RSQ=0.8962;ERATE=0.0005;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2723172 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0396;AVGPOST=0.9985;RSQ=0.9869;ERATE=0.0003;THETA=0.0018;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 2723193 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.907;LDAF=0.0251;AVGPOST=0.9925;RSQ=0.8864;ERATE=0.0003;THETA=0.0006;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 2723203 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0187;AVGPOST=0.9989;RSQ=0.9732;ERATE=0.0005;THETA=0.0021;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 2723214 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.982;LDAF=0.4342;AVGPOST=0.9883;RSQ=0.9805;ERATE=0.0009;THETA=0.0048;AC=946;AN=2184 GT:DS:GL:BD 0.43315017 0
1 2723310 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.702;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5384;ERATE=0.0004;THETA=0.0072;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2723345 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.3281;AVGPOST=0.9910;RSQ=0.9853;ERATE=0.0006;THETA=0.0009;AC=713;AN=2184 GT:DS:GL:BD 0.32646519 0
1 2723389 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7420;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2723428 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9990;RSQ=0.9567;ERATE=0.0004;THETA=0.0008;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2723513 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.655;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4991;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2723541 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.789;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5532;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2723544 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0032;AVGPOST=0.9982;RSQ=0.7739;ERATE=0.0006;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2723552 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.986;LDAF=0.0966;AVGPOST=0.9948;RSQ=0.9792;ERATE=0.0006;THETA=0.0007;AC=209;AN=2184 GT:DS:GL:BD 0.09569597 0
1 2723606 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.782;LDAF=0.0026;AVGPOST=0.9963;RSQ=0.4118;ERATE=0.0008;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2723727 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8234;ERATE=0.0004;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2723842 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0068;AVGPOST=0.9989;RSQ=0.9517;ERATE=0.0003;THETA=0.0037;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2723854 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8399;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2723860 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7034;ERATE=0.0006;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2723868 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0198;AVGPOST=0.9986;RSQ=0.9736;ERATE=0.0003;THETA=0.0012;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 2723962 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.9987;AVGPOST=0.9993;RSQ=0.8054;ERATE=0.0004;THETA=0.0007;AC=2181;AN=2184 GT:DS:GL:BD 0.99862635 1
1 2724026 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0110;AVGPOST=0.9988;RSQ=0.9487;ERATE=0.0005;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 2724094 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0021;AVGPOST=0.9973;RSQ=0.5001;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2724167 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9238;ERATE=0.0004;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2724176 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.729;LDAF=0.0022;AVGPOST=0.9980;RSQ=0.6453;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2724181 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0084;AVGPOST=0.9992;RSQ=0.9581;ERATE=0.0004;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2724190 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0739;AVGPOST=0.9976;RSQ=0.9870;ERATE=0.0003;THETA=0.0005;AC=161;AN=2184 GT:DS:GL:BD 0.07371795 0
1 2724291 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7187;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2724386 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.726;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2724399 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.753;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5239;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2724497 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7228;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2724504 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.776;LDAF=0.0019;AVGPOST=0.9977;RSQ=0.4986;ERATE=0.0007;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2724561 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0039;AVGPOST=0.9986;RSQ=0.8394;ERATE=0.0005;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2724585 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.679;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4482;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2724622 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.778;LDAF=0.0077;AVGPOST=0.9958;RSQ=0.7918;ERATE=0.0005;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2724699 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.1217;AVGPOST=0.9947;RSQ=0.9818;ERATE=0.0007;THETA=0.0008;AC=265;AN=2184 GT:DS:GL:BD 0.12133700 0
1 2724709 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0075;AVGPOST=0.9994;RSQ=0.9669;ERATE=0.0003;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2724782 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0030;AVGPOST=0.9985;RSQ=0.8135;ERATE=0.0005;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2724946 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.626;LDAF=0.0015;AVGPOST=0.9981;RSQ=0.5193;ERATE=0.0005;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2725101 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0092;AVGPOST=0.9975;RSQ=0.8838;ERATE=0.0007;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 2725115 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0099;AVGPOST=0.9994;RSQ=0.9693;ERATE=0.0004;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 2725155 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.553;LDAF=0.0030;AVGPOST=0.9961;RSQ=0.5289;ERATE=0.0005;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2725162 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.889;LDAF=0.0115;AVGPOST=0.9979;RSQ=0.9203;ERATE=0.0006;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 2725166 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0058;AVGPOST=0.9926;RSQ=0.5159;ERATE=0.0004;THETA=0.0012;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2725229 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.902;LDAF=0.0136;AVGPOST=0.9969;RSQ=0.9177;ERATE=0.0004;THETA=0.0006;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 2725250 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.979;LDAF=0.0817;AVGPOST=0.9963;RSQ=0.9808;ERATE=0.0005;THETA=0.0003;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 2725337 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0215;AVGPOST=0.9976;RSQ=0.9570;ERATE=0.0004;THETA=0.0014;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 2725475 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.983;LDAF=0.5141;AVGPOST=0.9681;RSQ=0.9509;ERATE=0.0034;THETA=0.0037;AC=1115;AN=2184 GT:DS:GL:BD 0.51053113 1
1 2725503 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0199;AVGPOST=0.9992;RSQ=0.9824;ERATE=0.0004;THETA=0.0008;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 2725504 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.933;LDAF=0.0131;AVGPOST=0.9976;RSQ=0.9397;ERATE=0.0004;THETA=0.0010;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 2725507 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.903;LDAF=0.0224;AVGPOST=0.9936;RSQ=0.8894;ERATE=0.0005;THETA=0.0005;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 2725545 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.920;LDAF=0.0160;AVGPOST=0.9943;RSQ=0.8517;ERATE=0.0010;THETA=0.0007;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 2725581 . CGTGGGCCTGGCT C 743 PASS INDEL;BAVGPOST=0.987;BRSQ=0.592;LDAF=0.0245;AVGPOST=0.9930;RSQ=0.8887;ERATE=0.0006;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 2725625 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.873;LDAF=0.0068;AVGPOST=0.9961;RSQ=0.7538;ERATE=0.0006;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2725631 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0160;AVGPOST=0.9980;RSQ=0.9507;ERATE=0.0005;THETA=0.0008;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 2725652 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.861;LDAF=0.0048;AVGPOST=0.9984;RSQ=0.8601;ERATE=0.0005;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2725812 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.552;LDAF=0.0016;AVGPOST=0.9988;RSQ=0.6607;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2725934 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0201;AVGPOST=0.9989;RSQ=0.9766;ERATE=0.0006;THETA=0.0005;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 2725952 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.965;BRSQ=0.926;LDAF=0.2287;AVGPOST=0.9610;RSQ=0.9111;ERATE=0.0009;THETA=0.0005;AC=491;AN=2184 GT:DS:GL:BD 0.22481684 0
1 2726029 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.736;LDAF=0.0017;AVGPOST=0.9981;RSQ=0.5980;ERATE=0.0005;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2726058 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0702;AVGPOST=0.9980;RSQ=0.9891;ERATE=0.0003;THETA=0.0007;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 2726067 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.909;LDAF=0.0104;AVGPOST=0.9981;RSQ=0.9239;ERATE=0.0005;THETA=0.0013;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 2726157 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0048;AVGPOST=0.9994;RSQ=0.9520;ERATE=0.0004;THETA=0.0031;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2726163 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0788;AVGPOST=0.9982;RSQ=0.9912;ERATE=0.0004;THETA=0.0003;AC=172;AN=2184 GT:DS:GL:BD 0.07875458 0
1 2726190 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0024;AVGPOST=0.9980;RSQ=0.6669;ERATE=0.0004;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2726191 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0789;AVGPOST=0.9982;RSQ=0.9915;ERATE=0.0004;THETA=0.0011;AC=172;AN=2184 GT:DS:GL:BD 0.07875458 0
1 2726407 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0085;AVGPOST=0.9991;RSQ=0.9544;ERATE=0.0004;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2726424 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.554;LDAF=0.0011;AVGPOST=0.9984;RSQ=0.4547;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2726468 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.907;LDAF=0.0108;AVGPOST=0.9968;RSQ=0.8700;ERATE=0.0005;THETA=0.0007;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 2726586 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.726;LDAF=0.0040;AVGPOST=0.9951;RSQ=0.5664;ERATE=0.0006;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2726593 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.7524;ERATE=0.0006;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2726623 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0202;AVGPOST=0.9988;RSQ=0.9757;ERATE=0.0004;THETA=0.0006;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 2726700 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.833;LDAF=0.0088;AVGPOST=0.9970;RSQ=0.8638;ERATE=0.0005;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2726708 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9221;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2726715 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9979;RSQ=0.9071;ERATE=0.0006;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2726749 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0044;AVGPOST=0.9975;RSQ=0.7587;ERATE=0.0006;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2726770 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.833;LDAF=0.0501;AVGPOST=0.9705;RSQ=0.7697;ERATE=0.0024;THETA=0.0003;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 2726820 . G GT 18 PASS INDEL;BAVGPOST=0.986;BRSQ=0.306;LDAF=0.0202;AVGPOST=0.9661;RSQ=0.3102;ERATE=0.0022;THETA=0.0013;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2726827 . G GC 25 PASS INDEL;BAVGPOST=0.995;BRSQ=0.340;LDAF=0.0367;AVGPOST=0.9547;RSQ=0.5161;ERATE=0.0028;THETA=0.0009;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 2726830 . G GC 225 PASS INDEL;BAVGPOST=0.985;BRSQ=0.727;LDAF=0.0396;AVGPOST=0.9698;RSQ=0.6963;ERATE=0.0038;THETA=0.0002;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 2726855 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.572;LDAF=0.0054;AVGPOST=0.9937;RSQ=0.4986;ERATE=0.0010;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2726864 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.808;LDAF=0.0445;AVGPOST=0.9823;RSQ=0.8314;ERATE=0.0007;THETA=0.0036;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 2726873 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.784;LDAF=0.0072;AVGPOST=0.9933;RSQ=0.6609;ERATE=0.0005;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2726889 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.508;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4171;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2727034 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0157;AVGPOST=0.9988;RSQ=0.9688;ERATE=0.0005;THETA=0.0015;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 2727088 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0116;AVGPOST=0.9987;RSQ=0.9502;ERATE=0.0004;THETA=0.0006;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 2727192 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0108;AVGPOST=0.9994;RSQ=0.9744;ERATE=0.0004;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 2727196 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0115;AVGPOST=0.9981;RSQ=0.9282;ERATE=0.0006;THETA=0.0010;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 2727231 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.3987;ERATE=0.0007;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2727378 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0087;AVGPOST=0.9986;RSQ=0.9507;ERATE=0.0003;THETA=0.0011;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2727393 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0015;AVGPOST=0.9981;RSQ=0.4812;ERATE=0.0004;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2727426 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0048;AVGPOST=0.9993;RSQ=0.9512;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2727450 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0103;AVGPOST=0.9977;RSQ=0.9214;ERATE=0.0004;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 2727506 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.952;LDAF=0.0138;AVGPOST=0.9983;RSQ=0.9507;ERATE=0.0007;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2727583 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.954;LDAF=0.0128;AVGPOST=0.9963;RSQ=0.8804;ERATE=0.0007;THETA=0.0007;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 2727638 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3365;AVGPOST=0.9889;RSQ=0.9818;ERATE=0.0009;THETA=0.0009;AC=732;AN=2184 GT:DS:GL:BD 0.33516484 0
1 2727660 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0047;AVGPOST=0.9995;RSQ=0.9520;ERATE=0.0003;THETA=0.0018;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2727742 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0047;AVGPOST=0.9996;RSQ=0.9628;ERATE=0.0004;THETA=0.0010;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2727766 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0054;AVGPOST=0.9990;RSQ=0.9303;ERATE=0.0006;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2727767 . T TG 31 PASS INDEL;BAVGPOST=0.999;BRSQ=0.723;LDAF=0.0027;AVGPOST=0.9969;RSQ=0.5322;ERATE=0.0007;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2727775 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0016;AVGPOST=0.9981;RSQ=0.5711;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2727777 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6183;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2727804 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.3352;AVGPOST=0.9918;RSQ=0.9866;ERATE=0.0005;THETA=0.0021;AC=732;AN=2184 GT:DS:GL:BD 0.33516484 0
1 2727811 . TC T 36 PASS INDEL;BAVGPOST=0.952;BRSQ=0.026;LDAF=0.1512;AVGPOST=0.7730;RSQ=0.3027;ERATE=0.0103;THETA=0.0007;AC=151;AN=2184 GT:DS:GL:BD 0.06913920 0
1 2728189 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.619;LDAF=0.0028;AVGPOST=0.9978;RSQ=0.6871;ERATE=0.0005;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2728422 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.629;LDAF=0.0034;AVGPOST=0.9945;RSQ=0.3329;ERATE=0.0008;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2728455 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0122;AVGPOST=0.9993;RSQ=0.9751;ERATE=0.0005;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 2728475 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6171;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2728580 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0029;AVGPOST=0.9972;RSQ=0.6012;ERATE=0.0006;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2728616 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0216;AVGPOST=0.9980;RSQ=0.9661;ERATE=0.0009;THETA=0.0024;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 2728628 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.974;LDAF=0.0336;AVGPOST=0.9964;RSQ=0.9611;ERATE=0.0003;THETA=0.0012;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 2728721 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3332;AVGPOST=0.9914;RSQ=0.9847;ERATE=0.0007;THETA=0.0013;AC=729;AN=2184 GT:DS:GL:BD 0.33379120 0
1 2728868 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0038;AVGPOST=0.9990;RSQ=0.8959;ERATE=0.0004;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2729038 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.1001;AVGPOST=0.9986;RSQ=0.9940;ERATE=0.0004;THETA=0.0010;AC=219;AN=2184 GT:DS:GL:BD 0.10027473 0
1 2729153 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2729225 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2729235 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.1234;AVGPOST=0.9991;RSQ=0.9972;ERATE=0.0003;THETA=0.0010;AC=270;AN=2184 GT:DS:GL:BD 0.12362637 0
1 2729251 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0791;AVGPOST=0.9983;RSQ=0.9906;ERATE=0.0003;THETA=0.0019;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 2729269 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7646;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2729270 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6758;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2729430 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2729548 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.7050;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2729549 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0099;AVGPOST=0.9989;RSQ=0.9640;ERATE=0.0003;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 2729591 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0015;AVGPOST=0.9993;RSQ=0.7796;ERATE=0.0005;THETA=0.0032;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2729598 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.4708;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2729642 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8622;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2729674 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9996;RSQ=0.9587;ERATE=0.0004;THETA=0.0010;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2729693 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.777;LDAF=0.0040;AVGPOST=0.9975;RSQ=0.7371;ERATE=0.0006;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2729698 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.979;LDAF=0.1294;AVGPOST=0.9915;RSQ=0.9734;ERATE=0.0013;THETA=0.0009;AC=279;AN=2184 GT:DS:GL:BD 0.12774725 0
1 2729808 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0023;AVGPOST=0.9981;RSQ=0.6303;ERATE=0.0005;THETA=0.0039;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2729819 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.632;LDAF=0.0106;AVGPOST=0.9872;RSQ=0.5320;ERATE=0.0012;THETA=0.0008;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2729849 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.524;LDAF=0.0512;AVGPOST=0.9362;RSQ=0.4526;ERATE=0.0176;THETA=0.0014;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 2729910 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0758;AVGPOST=0.9957;RSQ=0.9749;ERATE=0.0007;THETA=0.0004;AC=165;AN=2184 GT:DS:GL:BD 0.07554945 0
1 2730010 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.861;LDAF=0.0289;AVGPOST=0.9916;RSQ=0.8906;ERATE=0.0010;THETA=0.0017;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 2730035 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.779;LDAF=0.0116;AVGPOST=0.9952;RSQ=0.8307;ERATE=0.0006;THETA=0.0011;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 2730090 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.496;LDAF=0.0059;AVGPOST=0.9922;RSQ=0.4925;ERATE=0.0009;THETA=0.0017;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2730119 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.626;LDAF=0.0033;AVGPOST=0.9957;RSQ=0.4144;ERATE=0.0008;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2730182 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.682;LDAF=0.0031;AVGPOST=0.9952;RSQ=0.3646;ERATE=0.0008;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2730252 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0062;AVGPOST=0.9977;RSQ=0.8359;ERATE=0.0007;THETA=0.0015;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2730393 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5381;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2730437 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7023;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2730463 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0021;AVGPOST=0.9988;RSQ=0.7641;ERATE=0.0003;THETA=0.0016;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2730485 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.736;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7895;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2730581 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0004;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2730612 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0079;AVGPOST=0.9990;RSQ=0.9562;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2730613 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6074;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2730624 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8538;ERATE=0.0004;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2730631 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0004;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2730650 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0208;AVGPOST=0.9979;RSQ=0.9612;ERATE=0.0005;THETA=0.0012;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 2730661 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.975;LDAF=0.0416;AVGPOST=0.9976;RSQ=0.9768;ERATE=0.0005;THETA=0.0008;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 2730672 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.733;LDAF=0.0015;AVGPOST=0.9982;RSQ=0.6042;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2730694 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.714;LDAF=0.0047;AVGPOST=0.9969;RSQ=0.7457;ERATE=0.0004;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2730712 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0726;AVGPOST=0.9980;RSQ=0.9879;ERATE=0.0005;THETA=0.0006;AC=158;AN=2184 GT:DS:GL:BD 0.07234433 0
1 2730713 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.702;LDAF=0.0018;AVGPOST=0.9980;RSQ=0.5157;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2730720 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4917;ERATE=0.0005;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2730730 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0065;AVGPOST=0.9987;RSQ=0.9520;ERATE=0.0003;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2730735 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.607;LDAF=0.0042;AVGPOST=0.9953;RSQ=0.5369;ERATE=0.0007;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2730765 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5665;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2730769 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.9090;ERATE=0.0004;THETA=0.0012;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2730770 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9996;RSQ=0.9631;ERATE=0.0004;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2730783 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8442;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2730812 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5542;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2730836 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0027;AVGPOST=0.9989;RSQ=0.8145;ERATE=0.0006;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2730867 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5834;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2730908 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5826;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2730919 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0024;AVGPOST=0.9978;RSQ=0.6757;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2730955 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0080;AVGPOST=0.9995;RSQ=0.9731;ERATE=0.0004;THETA=0.0014;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2730976 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0039;AVGPOST=0.9994;RSQ=0.9390;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2730999 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0004;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2731001 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0154;AVGPOST=0.9971;RSQ=0.9302;ERATE=0.0004;THETA=0.0006;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 2731097 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0031;AVGPOST=0.9983;RSQ=0.7914;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2731101 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0092;AVGPOST=0.9998;RSQ=0.9913;ERATE=0.0003;THETA=0.0007;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2731109 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.7717;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2731159 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.748;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7730;ERATE=0.0004;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2731199 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0112;AVGPOST=0.9996;RSQ=0.9821;ERATE=0.0004;THETA=0.0008;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 2731258 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.795;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5064;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2731305 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.657;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.5678;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2731314 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.698;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5729;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2731323 . CAG C 245 PASS INDEL;BAVGPOST=1.000;BRSQ=0.660;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5620;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2731343 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0035;AVGPOST=0.9971;RSQ=0.7140;ERATE=0.0004;THETA=0.0015;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2731368 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.672;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.3744;ERATE=0.0006;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2731403 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.970;LDAF=0.0895;AVGPOST=0.9930;RSQ=0.9680;ERATE=0.0010;THETA=0.0007;AC=194;AN=2184 GT:DS:GL:BD 0.08882784 0
1 2731421 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.970;LDAF=0.0761;AVGPOST=0.9966;RSQ=0.9827;ERATE=0.0006;THETA=0.0016;AC=165;AN=2184 GT:DS:GL:BD 0.07554945 0
1 2731452 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7143;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2731474 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0043;AVGPOST=0.9992;RSQ=0.9129;ERATE=0.0004;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2731478 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.710;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4209;ERATE=0.0005;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2731516 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.565;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2731534 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0048;AVGPOST=0.9940;RSQ=0.5553;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2731557 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0053;AVGPOST=0.9985;RSQ=0.8991;ERATE=0.0006;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2731584 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.834;LDAF=0.0061;AVGPOST=0.9949;RSQ=0.6760;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2731642 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.886;LDAF=0.0046;AVGPOST=0.9987;RSQ=0.8711;ERATE=0.0005;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2731655 . TTCCATCCAGC T 112 PASS INDEL;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0025;AVGPOST=0.9960;RSQ=0.4591;ERATE=0.0005;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2731658 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0053;AVGPOST=0.9986;RSQ=0.9188;ERATE=0.0003;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2731801 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5289;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2731808 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0018;AVGPOST=0.9979;RSQ=0.5223;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2731813 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.734;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.5447;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2731844 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0126;AVGPOST=0.9934;RSQ=0.8085;ERATE=0.0004;THETA=0.0007;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 2731864 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0114;AVGPOST=0.9988;RSQ=0.9490;ERATE=0.0005;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 2731900 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.750;LDAF=0.0025;AVGPOST=0.9975;RSQ=0.6326;ERATE=0.0006;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2731984 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0125;AVGPOST=0.9970;RSQ=0.8952;ERATE=0.0006;THETA=0.0008;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 2732022 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.882;LDAF=0.0630;AVGPOST=0.9847;RSQ=0.9120;ERATE=0.0006;THETA=0.0007;AC=131;AN=2184 GT:DS:GL:BD 0.05998169 0
1 2732077 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9538;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2732135 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.837;LDAF=0.0046;AVGPOST=0.9979;RSQ=0.8353;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2732150 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.900;LDAF=0.0135;AVGPOST=0.9939;RSQ=0.8461;ERATE=0.0004;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2732159 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.5104;ERATE=0.0007;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2732296 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0099;AVGPOST=0.9984;RSQ=0.9404;ERATE=0.0004;THETA=0.0009;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2732308 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.741;LDAF=0.0023;AVGPOST=0.9971;RSQ=0.4947;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2732360 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=0.9988;RSQ=0.8876;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2732483 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.728;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.7311;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2732491 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6872;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2732521 . C CAG 49 PASS INDEL;BAVGPOST=1.000;BRSQ=0.767;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4633;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2732571 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8757;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2732681 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0648;AVGPOST=0.9986;RSQ=0.9906;ERATE=0.0004;THETA=0.0008;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 2732690 . CTAT C 156 PASS INDEL;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5181;ERATE=0.0005;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2732708 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.647;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6218;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2732728 . TAAAGC T 73 PASS INDEL;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5052;ERATE=0.0004;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2732802 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0342;AVGPOST=0.9990;RSQ=0.9872;ERATE=0.0004;THETA=0.0007;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 2732807 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0024;AVGPOST=0.9971;RSQ=0.4947;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2732937 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2733086 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2733091 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.942;LDAF=0.0376;AVGPOST=0.9938;RSQ=0.9328;ERATE=0.0005;THETA=0.0009;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 2733193 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6532;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2733206 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2733210 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0570;AVGPOST=0.9982;RSQ=0.9892;ERATE=0.0005;THETA=0.0002;AC=123;AN=2184 GT:DS:GL:BD 0.05631868 0
1 2733226 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.379;LDAF=0.0085;AVGPOST=0.9875;RSQ=0.4774;ERATE=0.0027;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2733287 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0088;AVGPOST=0.9979;RSQ=0.8934;ERATE=0.0004;THETA=0.0012;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2733348 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.929;LDAF=0.0090;AVGPOST=0.9988;RSQ=0.9462;ERATE=0.0004;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2733381 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.606;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6604;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2733462 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0181;AVGPOST=0.9992;RSQ=0.9800;ERATE=0.0003;THETA=0.0012;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 2733563 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2733587 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1199;AVGPOST=0.9975;RSQ=0.9929;ERATE=0.0004;THETA=0.0006;AC=263;AN=2184 GT:DS:GL:BD 0.12042125 0
1 2733804 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2733811 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6555;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2733842 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7163;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2733856 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0106;AVGPOST=0.9998;RSQ=0.9916;ERATE=0.0003;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 2733882 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0067;AVGPOST=0.9977;RSQ=0.8630;ERATE=0.0004;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2733892 . T TC 157 PASS INDEL;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.7277;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2733908 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.7890;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2733938 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0024;AVGPOST=0.9983;RSQ=0.7143;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2733949 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0106;AVGPOST=0.9999;RSQ=0.9940;ERATE=0.0003;THETA=0.0022;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 2733961 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2734007 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2734037 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.939;LDAF=0.0147;AVGPOST=0.9984;RSQ=0.9578;ERATE=0.0004;THETA=0.0008;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 2734044 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6958;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2734081 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2734262 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9799;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2734341 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2734439 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.709;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8580;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2734453 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2734539 . T TC 9 PASS INDEL;BAVGPOST=0.999;BRSQ=0.539;LDAF=0.0018;AVGPOST=0.9974;RSQ=0.3581;ERATE=0.0007;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2734599 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6501;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2734678 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0053;AVGPOST=0.9993;RSQ=0.9510;ERATE=0.0004;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2734793 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2734796 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0130;AVGPOST=0.9991;RSQ=0.9733;ERATE=0.0003;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 2734874 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.989;LDAF=0.1354;AVGPOST=0.9972;RSQ=0.9915;ERATE=0.0006;THETA=0.0008;AC=295;AN=2184 GT:DS:GL:BD 0.13507326 0
1 2734976 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5998;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2734993 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0064;AVGPOST=0.9991;RSQ=0.9366;ERATE=0.0004;THETA=0.0010;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2735068 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8319;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2735169 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0344;AVGPOST=0.9995;RSQ=0.9933;ERATE=0.0003;THETA=0.0009;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 2735170 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2735265 rs34936518 GC G 59927 PASS INDEL;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.3313;AVGPOST=0.9898;RSQ=0.9823;ERATE=0.0008;THETA=0.0014;AC=724;AN=2184 GT:DS:GL:BD 0.33150184 0
1 2735280 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6260;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2735317 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0034;AVGPOST=0.9990;RSQ=0.8988;ERATE=0.0004;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2735328 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0105;AVGPOST=1.0000;RSQ=0.9979;ERATE=0.0003;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 2735345 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6730;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2735418 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0956;AVGPOST=0.9992;RSQ=0.9962;ERATE=0.0004;THETA=0.0007;AC=209;AN=2184 GT:DS:GL:BD 0.09569597 0
1 2735463 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0192;AVGPOST=0.9974;RSQ=0.9452;ERATE=0.0008;THETA=0.0007;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 2735520 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2735521 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2735557 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.7059;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2735603 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9989;RSQ=0.9260;ERATE=0.0005;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2735756 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0106;AVGPOST=0.9997;RSQ=0.9876;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 2735777 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0106;AVGPOST=0.9998;RSQ=0.9917;ERATE=0.0003;THETA=0.0013;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 2735820 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.0957;AVGPOST=0.9987;RSQ=0.9939;ERATE=0.0004;THETA=0.0005;AC=209;AN=2184 GT:DS:GL:BD 0.09569597 0
1 2735875 . AACAC A 939 PASS INDEL;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0127;AVGPOST=0.9979;RSQ=0.9319;ERATE=0.0005;THETA=0.0006;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 2735879 . CACACACCT C 2743 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0107;AVGPOST=0.9995;RSQ=0.9809;ERATE=0.0003;THETA=0.0022;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 2735909 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8704;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2735973 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.982;LDAF=0.0532;AVGPOST=0.9963;RSQ=0.9699;ERATE=0.0004;THETA=0.0005;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 2735993 . ATGCACACATT A 21707 PASS INDEL;BAVGPOST=0.988;BRSQ=0.937;LDAF=0.0915;AVGPOST=0.9941;RSQ=0.9773;ERATE=0.0004;THETA=0.0007;AC=199;AN=2184 GT:DS:GL:BD 0.09111722 0
1 2736027 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0038;AVGPOST=0.9995;RSQ=0.9394;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2736097 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.9981;AVGPOST=0.9981;RSQ=0.5703;ERATE=0.0008;THETA=0.0006;AC=2182;AN=2184 GT:DS:GL:BD 0.99908423 1
1 2736114 . CACA C 465 PASS INDEL;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0085;AVGPOST=0.9969;RSQ=0.8624;ERATE=0.0004;THETA=0.0013;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2736153 . GCA G 1290 PASS INDEL;BAVGPOST=0.996;BRSQ=0.924;LDAF=0.0192;AVGPOST=0.9952;RSQ=0.8951;ERATE=0.0017;THETA=0.0006;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 2736174 . CCA C 43 PASS INDEL;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4794;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2736218 . TAC T 173 PASS INDEL;BAVGPOST=0.997;BRSQ=0.790;LDAF=0.0049;AVGPOST=0.9958;RSQ=0.6587;ERATE=0.0022;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2736247 . GCACA G 1804 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9989;RSQ=0.9529;ERATE=0.0003;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2736252 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0233;AVGPOST=0.9992;RSQ=0.9877;ERATE=0.0003;THETA=0.0011;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 2736289 . ACC A 1228 PASS INDEL;BAVGPOST=0.957;BRSQ=0.796;LDAF=0.1089;AVGPOST=0.9786;RSQ=0.9239;ERATE=0.0009;THETA=0.0009;AC=246;AN=2184 GT:DS:GL:BD 0.11263736 0
1 2736318 . CCTG C 5498 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0229;AVGPOST=0.9982;RSQ=0.9711;ERATE=0.0005;THETA=0.0006;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 2736325 . GCA G 123 PASS INDEL;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5360;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2736335 . GCA G 753 PASS INDEL;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0070;AVGPOST=0.9974;RSQ=0.8525;ERATE=0.0006;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 2736353 . G GCA 2242 PASS INDEL;BAVGPOST=0.996;BRSQ=0.871;LDAF=0.0138;AVGPOST=0.9952;RSQ=0.8833;ERATE=0.0003;THETA=0.0007;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 2736462 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0023;AVGPOST=0.9985;RSQ=0.7387;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2736529 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0052;AVGPOST=0.9996;RSQ=0.9716;ERATE=0.0004;THETA=0.0028;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2736571 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2736577 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0071;AVGPOST=0.9988;RSQ=0.9371;ERATE=0.0004;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 2736588 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0107;AVGPOST=0.9995;RSQ=0.9798;ERATE=0.0003;THETA=0.0007;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 2736619 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0004;THETA=0.0026;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2736695 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0106;AVGPOST=0.9997;RSQ=0.9875;ERATE=0.0003;THETA=0.0007;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 2736696 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8879;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2736721 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0021;AVGPOST=0.9988;RSQ=0.7169;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2736800 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5735;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2736808 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6742;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2736832 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.910;LDAF=0.1256;AVGPOST=0.9638;RSQ=0.8675;ERATE=0.0112;THETA=0.0003;AC=254;AN=2184 GT:DS:GL:BD 0.11630037 0
1 2736963 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.980;LDAF=0.1169;AVGPOST=0.9914;RSQ=0.9728;ERATE=0.0006;THETA=0.0004;AC=255;AN=2184 GT:DS:GL:BD 0.11675824 0
1 2736978 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6960;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2737129 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.588;LDAF=0.0017;AVGPOST=0.9979;RSQ=0.4482;ERATE=0.0006;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2737242 rs3039796 ACCAGGGGG A 831 PASS INDEL;BAVGPOST=0.982;BRSQ=0.719;LDAF=0.0654;AVGPOST=0.9400;RSQ=0.6378;ERATE=0.0024;THETA=0.0006;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 2737303 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.693;LDAF=0.0309;AVGPOST=0.9677;RSQ=0.5833;ERATE=0.0053;THETA=0.0006;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 2737392 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0024;AVGPOST=0.9962;RSQ=0.4078;ERATE=0.0006;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2737398 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0110;AVGPOST=0.9991;RSQ=0.9612;ERATE=0.0004;THETA=0.0007;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 2737486 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.964;LDAF=0.9798;AVGPOST=0.9973;RSQ=0.9453;ERATE=0.0004;THETA=0.0010;AC=2140;AN=2184 GT:DS:GL:BD 0.97985345 1
1 2737550 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9395;ERATE=0.0004;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2737610 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.908;LDAF=0.0134;AVGPOST=0.9935;RSQ=0.8007;ERATE=0.0013;THETA=0.0012;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 2737637 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.925;LDAF=0.0166;AVGPOST=0.9945;RSQ=0.8695;ERATE=0.0006;THETA=0.0033;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 2737702 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.899;LDAF=0.0168;AVGPOST=0.9951;RSQ=0.8848;ERATE=0.0005;THETA=0.0006;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 2737752 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2737832 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0050;AVGPOST=0.9972;RSQ=0.7479;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2737875 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.890;LDAF=0.0035;AVGPOST=0.9979;RSQ=0.7963;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2737946 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0034;AVGPOST=0.9979;RSQ=0.7287;ERATE=0.0004;THETA=0.0023;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2738032 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0054;AVGPOST=0.9989;RSQ=0.9295;ERATE=0.0006;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2738069 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.820;LDAF=0.0061;AVGPOST=0.9960;RSQ=0.7276;ERATE=0.0008;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2738075 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.962;LDAF=0.1184;AVGPOST=0.9891;RSQ=0.9664;ERATE=0.0010;THETA=0.0005;AC=260;AN=2184 GT:DS:GL:BD 0.11904762 0
1 2738093 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.925;LDAF=0.0150;AVGPOST=0.9963;RSQ=0.9060;ERATE=0.0005;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 2738143 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.863;LDAF=0.0067;AVGPOST=0.9963;RSQ=0.7964;ERATE=0.0005;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2738265 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.994;LDAF=0.3306;AVGPOST=0.9845;RSQ=0.9736;ERATE=0.0009;THETA=0.0024;AC=723;AN=2184 GT:DS:GL:BD 0.33104396 0
1 2738284 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5266;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2738417 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.975;LDAF=0.1290;AVGPOST=0.9938;RSQ=0.9801;ERATE=0.0010;THETA=0.0005;AC=283;AN=2184 GT:DS:GL:BD 0.12957875 0
1 2738434 . GT G 675 PASS INDEL;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0130;AVGPOST=0.9990;RSQ=0.9691;ERATE=0.0003;THETA=0.0069;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 2738435 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6295;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2738513 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.773;LDAF=0.0026;AVGPOST=0.9978;RSQ=0.6633;ERATE=0.0006;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2738554 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4681;ERATE=0.0006;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2738567 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.517;LDAF=0.0074;AVGPOST=0.9867;RSQ=0.2997;ERATE=0.0020;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2738666 . AGTGTGCACTGGGGCGGGGCGG A 2505 PASS INDEL;BAVGPOST=0.977;BRSQ=0.580;LDAF=0.0370;AVGPOST=0.9752;RSQ=0.7289;ERATE=0.0026;THETA=0.0014;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 2738680 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.853;LDAF=0.0117;AVGPOST=0.9916;RSQ=0.7017;ERATE=0.0011;THETA=0.0008;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 2739019 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.520;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4629;ERATE=0.0005;THETA=0.0036;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2739123 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.926;LDAF=0.1795;AVGPOST=0.9612;RSQ=0.8988;ERATE=0.0044;THETA=0.0008;AC=371;AN=2184 GT:DS:GL:BD 0.16987179 0
1 2739139 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.741;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4355;ERATE=0.0006;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2739372 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.975;LDAF=0.0149;AVGPOST=0.9987;RSQ=0.9644;ERATE=0.0004;THETA=0.0035;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 2739379 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0731;AVGPOST=0.9971;RSQ=0.9849;ERATE=0.0005;THETA=0.0006;AC=158;AN=2184 GT:DS:GL:BD 0.07234433 0
1 2739393 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0006;AVGPOST=0.9992;RSQ=0.4133;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2739523 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5605;ERATE=0.0005;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2739697 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0045;AVGPOST=0.9985;RSQ=0.8854;ERATE=0.0004;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2739698 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0044;AVGPOST=0.9985;RSQ=0.8889;ERATE=0.0003;THETA=0.0012;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2739728 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.795;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7165;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2739771 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.889;LDAF=0.0048;AVGPOST=0.9993;RSQ=0.9323;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2739779 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.8379;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2739933 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0149;AVGPOST=0.9994;RSQ=0.9820;ERATE=0.0004;THETA=0.0005;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 2739972 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.1040;AVGPOST=0.9961;RSQ=0.9848;ERATE=0.0007;THETA=0.0009;AC=227;AN=2184 GT:DS:GL:BD 0.10393773 0
1 2740226 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7240;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2740279 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0110;AVGPOST=0.9990;RSQ=0.9613;ERATE=0.0004;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 2740289 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6514;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2740299 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0004;AVGPOST=0.9993;RSQ=0.4021;ERATE=0.0003;THETA=0.0010;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 2740303 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7778;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2740310 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.5439;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2740436 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5377;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2740602 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9403;ERATE=0.0003;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2740610 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.793;LDAF=0.0056;AVGPOST=0.9964;RSQ=0.7937;ERATE=0.0006;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2740654 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0084;AVGPOST=0.9985;RSQ=0.9305;ERATE=0.0004;THETA=0.0020;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2740661 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0039;AVGPOST=0.9996;RSQ=0.9580;ERATE=0.0003;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2740684 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1039;AVGPOST=0.9968;RSQ=0.9884;ERATE=0.0006;THETA=0.0012;AC=225;AN=2184 GT:DS:GL:BD 0.10302198 0
1 2740707 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4453;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2740808 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7494;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2741039 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8509;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2741067 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6263;ERATE=0.0005;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2741082 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0158;AVGPOST=0.9976;RSQ=0.9459;ERATE=0.0004;THETA=0.0010;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 2741102 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0032;AVGPOST=0.9986;RSQ=0.8368;ERATE=0.0005;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2741109 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0010;AVGPOST=0.9984;RSQ=0.3851;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2741115 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0149;AVGPOST=0.9994;RSQ=0.9802;ERATE=0.0004;THETA=0.0015;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 2741254 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.982;LDAF=0.0650;AVGPOST=0.9976;RSQ=0.9847;ERATE=0.0004;THETA=0.0008;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 2741255 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0130;AVGPOST=0.9994;RSQ=0.9776;ERATE=0.0004;THETA=0.0008;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 2741265 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4979;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2741367 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.647;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.3951;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2741373 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0075;AVGPOST=0.9996;RSQ=0.9807;ERATE=0.0004;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2741498 rs61154644 TGTGTGTG T 707 PASS INDEL;BAVGPOST=0.904;BRSQ=0.533;LDAF=0.1531;AVGPOST=0.8355;RSQ=0.4939;ERATE=0.0363;THETA=0.0007;AC=208;AN=2184 GT:DS:GL:BD 0.09523810 0
1 2741508 . T TG 1715 PASS INDEL;BAVGPOST=0.987;BRSQ=0.939;LDAF=0.0780;AVGPOST=0.9772;RSQ=0.8827;ERATE=0.0023;THETA=0.0007;AC=160;AN=2184 GT:DS:GL:BD 0.07326008 0
1 2741594 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0088;AVGPOST=0.9988;RSQ=0.9527;ERATE=0.0004;THETA=0.0008;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 2741700 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.767;LDAF=0.9954;AVGPOST=0.9964;RSQ=0.7137;ERATE=0.0005;THETA=0.0010;AC=2175;AN=2184 GT:DS:GL:BD 0.99587911 1
1 2741744 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.886;LDAF=0.0083;AVGPOST=0.9978;RSQ=0.8814;ERATE=0.0007;THETA=0.0013;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2741833 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0113;AVGPOST=0.9993;RSQ=0.9713;ERATE=0.0004;THETA=0.0006;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 2741874 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0213;AVGPOST=0.9984;RSQ=0.9767;ERATE=0.0004;THETA=0.0004;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 2741958 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2742074 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4739;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2742189 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.767;LDAF=0.0029;AVGPOST=0.9978;RSQ=0.7158;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2742363 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.792;LDAF=0.0032;AVGPOST=0.9977;RSQ=0.6842;ERATE=0.0012;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2742408 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.6643;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2742453 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.731;LDAF=0.0022;AVGPOST=0.9965;RSQ=0.4186;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2742491 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0737;AVGPOST=0.9974;RSQ=0.9861;ERATE=0.0004;THETA=0.0006;AC=160;AN=2184 GT:DS:GL:BD 0.07326008 0
1 2742534 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0148;AVGPOST=0.9997;RSQ=0.9915;ERATE=0.0003;THETA=0.0005;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 2742546 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2742600 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.662;LDAF=0.0115;AVGPOST=0.9915;RSQ=0.7134;ERATE=0.0005;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2742604 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0136;AVGPOST=0.9956;RSQ=0.8740;ERATE=0.0007;THETA=0.0008;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 2742736 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0046;AVGPOST=0.9988;RSQ=0.9176;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2742794 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0073;AVGPOST=0.9999;RSQ=0.9935;ERATE=0.0003;THETA=0.0008;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2742893 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.982;LDAF=0.0598;AVGPOST=0.9900;RSQ=0.9297;ERATE=0.0005;THETA=0.0003;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 2742979 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.776;LDAF=0.0037;AVGPOST=0.9965;RSQ=0.6110;ERATE=0.0005;THETA=0.0015;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2742981 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.887;LDAF=0.0108;AVGPOST=0.9960;RSQ=0.8437;ERATE=0.0004;THETA=0.0014;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 2742996 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.943;LDAF=0.0145;AVGPOST=0.9971;RSQ=0.9070;ERATE=0.0005;THETA=0.0019;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 2743008 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0656;AVGPOST=0.9972;RSQ=0.9822;ERATE=0.0004;THETA=0.0006;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 2743025 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4162;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2743052 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2743088 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.741;LDAF=0.0038;AVGPOST=0.9970;RSQ=0.7136;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2743089 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0041;AVGPOST=0.9979;RSQ=0.7815;ERATE=0.0005;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2743146 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0148;AVGPOST=0.9994;RSQ=0.9822;ERATE=0.0004;THETA=0.0011;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 2743155 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8411;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2743250 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.963;LDAF=0.0150;AVGPOST=0.9991;RSQ=0.9736;ERATE=0.0005;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 2743319 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.834;LDAF=0.0088;AVGPOST=0.9967;RSQ=0.8544;ERATE=0.0012;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2743406 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.698;LDAF=0.0029;AVGPOST=0.9969;RSQ=0.6052;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2743492 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0199;AVGPOST=0.9976;RSQ=0.9603;ERATE=0.0004;THETA=0.0005;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 2743709 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5663;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2743810 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0026;AVGPOST=0.9970;RSQ=0.5768;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2744004 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2744237 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0258;AVGPOST=0.9997;RSQ=0.9943;ERATE=0.0003;THETA=0.0027;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 2744414 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.962;LDAF=0.0311;AVGPOST=0.9961;RSQ=0.9588;ERATE=0.0005;THETA=0.0011;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 2744416 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.898;LDAF=0.0206;AVGPOST=0.9963;RSQ=0.9237;ERATE=0.0004;THETA=0.0008;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 2744427 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0028;AVGPOST=0.9986;RSQ=0.7951;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2744462 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.830;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9224;ERATE=0.0004;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2744466 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.552;LDAF=0.0046;AVGPOST=0.9947;RSQ=0.5721;ERATE=0.0006;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2744637 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6474;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2744710 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.970;LDAF=0.3241;AVGPOST=0.9880;RSQ=0.9800;ERATE=0.0005;THETA=0.0013;AC=714;AN=2184 GT:DS:GL:BD 0.32692307 0
1 2744755 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6872;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2744818 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0077;AVGPOST=0.9974;RSQ=0.8671;ERATE=0.0004;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2744831 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.938;LDAF=0.0271;AVGPOST=0.9946;RSQ=0.9209;ERATE=0.0005;THETA=0.0005;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 2744832 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0014;AVGPOST=0.9992;RSQ=0.7763;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2744877 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.8775;AVGPOST=0.9975;RSQ=0.9913;ERATE=0.0005;THETA=0.0005;AC=1917;AN=2184 GT:DS:GL:BD 0.87774724 1
1 2744901 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0767;AVGPOST=0.9973;RSQ=0.9847;ERATE=0.0007;THETA=0.0005;AC=167;AN=2184 GT:DS:GL:BD 0.07646520 0
1 2744904 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.738;LDAF=0.0098;AVGPOST=0.9912;RSQ=0.6643;ERATE=0.0016;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2744916 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5195;ERATE=0.0006;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2745000 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.8787;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2745086 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.962;LDAF=0.0153;AVGPOST=0.9986;RSQ=0.9698;ERATE=0.0003;THETA=0.0008;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 2745201 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4700;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2745238 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.6000;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2745338 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.922;LDAF=0.0155;AVGPOST=0.9960;RSQ=0.9038;ERATE=0.0004;THETA=0.0024;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 2745371 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.704;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5222;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2745399 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.6009;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2745418 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0054;AVGPOST=0.9990;RSQ=0.9175;ERATE=0.0004;THETA=0.0012;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2745441 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.630;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7476;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2745515 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0049;AVGPOST=0.9988;RSQ=0.9133;ERATE=0.0003;THETA=0.0013;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2745522 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0129;AVGPOST=0.9989;RSQ=0.9615;ERATE=0.0005;THETA=0.0010;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 2745620 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0052;AVGPOST=0.9988;RSQ=0.8965;ERATE=0.0004;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2745771 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.612;LDAF=0.0072;AVGPOST=0.9910;RSQ=0.4618;ERATE=0.0009;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2745807 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0022;AVGPOST=0.9966;RSQ=0.4021;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2745808 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.1178;AVGPOST=0.9975;RSQ=0.9902;ERATE=0.0005;THETA=0.0013;AC=258;AN=2184 GT:DS:GL:BD 0.11813187 0
1 2745860 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.726;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.7783;ERATE=0.0006;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2745883 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.984;LDAF=0.4803;AVGPOST=0.9904;RSQ=0.9855;ERATE=0.0004;THETA=0.0005;AC=1045;AN=2184 GT:DS:GL:BD 0.47847986 0
1 2745974 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9602;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2746066 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.969;LDAF=0.2388;AVGPOST=0.9836;RSQ=0.9682;ERATE=0.0004;THETA=0.0008;AC=519;AN=2184 GT:DS:GL:BD 0.23763736 0
1 2746150 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6043;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2746225 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0047;AVGPOST=0.9989;RSQ=0.8988;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2746293 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4733;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2746304 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.608;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6193;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2746338 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.791;LDAF=0.0041;AVGPOST=0.9965;RSQ=0.7021;ERATE=0.0005;THETA=0.0033;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2746362 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0171;AVGPOST=0.9975;RSQ=0.9454;ERATE=0.0004;THETA=0.0007;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 2746442 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.989;LDAF=0.1161;AVGPOST=0.9915;RSQ=0.9679;ERATE=0.0016;THETA=0.0005;AC=250;AN=2184 GT:DS:GL:BD 0.11446887 0
1 2746465 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.673;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7540;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2746535 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.602;LDAF=0.0033;AVGPOST=0.9970;RSQ=0.6001;ERATE=0.0008;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2746578 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0039;AVGPOST=0.9985;RSQ=0.8711;ERATE=0.0004;THETA=0.0026;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2746662 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0198;AVGPOST=0.9979;RSQ=0.9653;ERATE=0.0004;THETA=0.0019;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 2746699 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0045;AVGPOST=0.9992;RSQ=0.9188;ERATE=0.0004;THETA=0.0017;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2746743 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0109;AVGPOST=0.9981;RSQ=0.9207;ERATE=0.0005;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 2746744 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.880;LDAF=0.0104;AVGPOST=0.9992;RSQ=0.9652;ERATE=0.0004;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 2746906 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0116;AVGPOST=0.9997;RSQ=0.9899;ERATE=0.0003;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 2746930 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4451;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2746934 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.795;LDAF=0.0055;AVGPOST=0.9980;RSQ=0.8416;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2746970 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0077;AVGPOST=0.9983;RSQ=0.9057;ERATE=0.0004;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2747053 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0019;AVGPOST=0.9982;RSQ=0.6058;ERATE=0.0004;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2747414 . TC T 39 PASS INDEL;BAVGPOST=0.977;BRSQ=0.083;LDAF=0.0166;AVGPOST=0.9746;RSQ=0.4076;ERATE=0.0015;THETA=0.0009;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 2747421 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.745;LDAF=0.0388;AVGPOST=0.9821;RSQ=0.8300;ERATE=0.0006;THETA=0.0032;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 2747472 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.610;LDAF=0.0109;AVGPOST=0.9917;RSQ=0.7033;ERATE=0.0006;THETA=0.0095;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 2747492 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.863;LDAF=0.0066;AVGPOST=0.9979;RSQ=0.9057;ERATE=0.0004;THETA=0.0022;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2747583 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.776;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6259;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2747616 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.950;LDAF=0.0074;AVGPOST=0.9987;RSQ=0.9324;ERATE=0.0004;THETA=0.0011;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2747638 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.968;LDAF=0.0332;AVGPOST=0.9975;RSQ=0.9681;ERATE=0.0003;THETA=0.0008;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 2747655 . CA C 102 PASS INDEL;BAVGPOST=0.999;BRSQ=0.494;LDAF=0.0044;AVGPOST=0.9935;RSQ=0.3931;ERATE=0.0011;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2747673 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.707;LDAF=0.0027;AVGPOST=0.9956;RSQ=0.2971;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2747736 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0094;AVGPOST=0.9983;RSQ=0.9306;ERATE=0.0004;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 2747882 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6180;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2747889 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0087;AVGPOST=0.9974;RSQ=0.8903;ERATE=0.0004;THETA=0.0008;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2747960 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.4141;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2748183 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0043;AVGPOST=0.9981;RSQ=0.8123;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2748184 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5469;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2748223 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.3967;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2748252 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9545;ERATE=0.0003;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2748285 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.611;LDAF=0.0027;AVGPOST=0.9977;RSQ=0.6533;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2748337 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.583;LDAF=0.0471;AVGPOST=0.9504;RSQ=0.5559;ERATE=0.0222;THETA=0.0005;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 2748380 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.652;LDAF=0.0024;AVGPOST=0.9971;RSQ=0.4657;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2748389 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.742;LDAF=0.0030;AVGPOST=0.9958;RSQ=0.5327;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2748456 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.846;LDAF=0.0024;AVGPOST=0.9978;RSQ=0.6155;ERATE=0.0009;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2748457 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0213;AVGPOST=0.9961;RSQ=0.9402;ERATE=0.0005;THETA=0.0012;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 2748599 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9609;ERATE=0.0003;THETA=0.0022;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2748635 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0653;AVGPOST=0.9977;RSQ=0.9863;ERATE=0.0003;THETA=0.0010;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 2748705 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.684;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.7147;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2748828 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0047;AVGPOST=0.9988;RSQ=0.8907;ERATE=0.0004;THETA=0.0013;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2748834 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9635;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2748920 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.816;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7515;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2748964 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0100;AVGPOST=0.9982;RSQ=0.9408;ERATE=0.0003;THETA=0.0012;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 2748981 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2749019 . C CTAGGA 2749 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0110;AVGPOST=0.9991;RSQ=0.9651;ERATE=0.0004;THETA=0.0008;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 2749104 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.894;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6008;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2749164 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0036;AVGPOST=0.9982;RSQ=0.8096;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2749243 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4880;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2749331 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0128;AVGPOST=0.9969;RSQ=0.9093;ERATE=0.0004;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 2749427 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0108;AVGPOST=0.9992;RSQ=0.9653;ERATE=0.0004;THETA=0.0014;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 2749442 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.759;LDAF=0.0284;AVGPOST=0.9846;RSQ=0.8035;ERATE=0.0007;THETA=0.0008;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 2749480 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0049;AVGPOST=0.9949;RSQ=0.5897;ERATE=0.0008;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2749522 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.564;LDAF=0.0042;AVGPOST=0.9969;RSQ=0.6975;ERATE=0.0005;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2749614 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.984;LDAF=0.3370;AVGPOST=0.9855;RSQ=0.9761;ERATE=0.0010;THETA=0.0019;AC=737;AN=2184 GT:DS:GL:BD 0.33745420 0
1 2749636 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0132;AVGPOST=0.9961;RSQ=0.8692;ERATE=0.0006;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 2749716 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.986;LDAF=0.3522;AVGPOST=0.9819;RSQ=0.9705;ERATE=0.0026;THETA=0.0056;AC=769;AN=2184 GT:DS:GL:BD 0.35210621 0
1 2749805 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.705;LDAF=0.0076;AVGPOST=0.9952;RSQ=0.7552;ERATE=0.0010;THETA=0.0094;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2749816 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0146;AVGPOST=0.9950;RSQ=0.8547;ERATE=0.0010;THETA=0.0010;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 2749921 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.936;LDAF=0.3108;AVGPOST=0.9581;RSQ=0.9280;ERATE=0.0060;THETA=0.0011;AC=676;AN=2184 GT:DS:GL:BD 0.30952382 0
1 2749986 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2750108 . ACTGT A 63 PASS INDEL;BAVGPOST=1.000;BRSQ=0.703;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.3900;ERATE=0.0007;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2750178 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.924;LDAF=0.0146;AVGPOST=0.9961;RSQ=0.9024;ERATE=0.0006;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2750197 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4146;ERATE=0.0004;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2750332 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2750437 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.974;LDAF=0.5031;AVGPOST=0.9824;RSQ=0.9739;ERATE=0.0008;THETA=0.0011;AC=1099;AN=2184 GT:DS:GL:BD 0.50320512 1
1 2750688 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0108;AVGPOST=0.9994;RSQ=0.9717;ERATE=0.0004;THETA=0.0009;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 2750791 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.827;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6808;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2750794 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6639;ERATE=0.0003;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2750896 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.871;LDAF=0.0037;AVGPOST=0.9977;RSQ=0.7293;ERATE=0.0005;THETA=0.0087;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2750907 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0248;AVGPOST=0.9984;RSQ=0.9771;ERATE=0.0004;THETA=0.0026;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 2750926 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.679;LDAF=0.0069;AVGPOST=0.9957;RSQ=0.7655;ERATE=0.0004;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2750930 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0051;AVGPOST=0.9995;RSQ=0.9585;ERATE=0.0003;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2750946 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4885;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2750954 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.773;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7386;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2750970 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0110;AVGPOST=0.9999;RSQ=0.9940;ERATE=0.0003;THETA=0.0006;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 2750975 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.752;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6082;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2750982 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.686;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6258;ERATE=0.0005;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2751055 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2751065 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0039;AVGPOST=0.9996;RSQ=0.9508;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2751083 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8832;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2751090 . AT A 49 PASS INDEL;BAVGPOST=1.000;BRSQ=0.741;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7218;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2751107 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0110;AVGPOST=1.0000;RSQ=0.9980;ERATE=0.0003;THETA=0.0007;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 2751237 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.986;LDAF=0.0584;AVGPOST=0.9975;RSQ=0.9818;ERATE=0.0004;THETA=0.0015;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 2751320 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0053;AVGPOST=0.9992;RSQ=0.9324;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2751345 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8754;ERATE=0.0005;THETA=0.0014;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2751360 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6616;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2751361 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.776;LDAF=0.0034;AVGPOST=0.9986;RSQ=0.8298;ERATE=0.0005;THETA=0.0011;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2751364 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.985;LDAF=0.0595;AVGPOST=0.9969;RSQ=0.9788;ERATE=0.0004;THETA=0.0004;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 2751389 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0023;AVGPOST=0.9981;RSQ=0.6941;ERATE=0.0005;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2751460 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0027;AVGPOST=0.9989;RSQ=0.8165;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2751560 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.736;LDAF=0.0076;AVGPOST=0.9971;RSQ=0.8348;ERATE=0.0004;THETA=0.0029;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2751648 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.685;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6398;ERATE=0.0006;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2751649 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0090;AVGPOST=0.9985;RSQ=0.9465;ERATE=0.0003;THETA=0.0012;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2751712 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4538;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2751780 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0154;AVGPOST=0.9992;RSQ=0.9759;ERATE=0.0004;THETA=0.0006;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 2751880 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.676;LDAF=0.0080;AVGPOST=0.9919;RSQ=0.5734;ERATE=0.0005;THETA=0.0041;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2751903 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.601;LDAF=0.0024;AVGPOST=0.9973;RSQ=0.5670;ERATE=0.0004;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2751925 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0109;AVGPOST=0.9987;RSQ=0.9510;ERATE=0.0004;THETA=0.0011;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 2751961 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.667;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.3782;ERATE=0.0006;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2752099 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.890;LDAF=0.0209;AVGPOST=0.9942;RSQ=0.8821;ERATE=0.0009;THETA=0.0007;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 2752180 . ATCAAG A 882 PASS INDEL;BAVGPOST=0.998;BRSQ=0.900;LDAF=0.0062;AVGPOST=0.9973;RSQ=0.8029;ERATE=0.0007;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2752221 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0181;AVGPOST=0.9982;RSQ=0.9607;ERATE=0.0004;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 2752265 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.982;LDAF=0.4363;AVGPOST=0.9861;RSQ=0.9781;ERATE=0.0005;THETA=0.0136;AC=951;AN=2184 GT:DS:GL:BD 0.43543956 0
1 2752416 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.5986;ERATE=0.0004;THETA=0.0036;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2752466 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.790;LDAF=0.0112;AVGPOST=0.9947;RSQ=0.7973;ERATE=0.0006;THETA=0.0066;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 2752503 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6852;ERATE=0.0004;THETA=0.0049;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2752570 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9670;ERATE=0.0003;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2752693 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.958;LDAF=0.5754;AVGPOST=0.9645;RSQ=0.9483;ERATE=0.0035;THETA=0.0051;AC=1256;AN=2184 GT:DS:GL:BD 0.57509160 1
1 2752719 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0181;AVGPOST=0.9980;RSQ=0.9516;ERATE=0.0005;THETA=0.0103;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 2752734 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.899;LDAF=0.0144;AVGPOST=0.9932;RSQ=0.8322;ERATE=0.0007;THETA=0.0024;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 2752759 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7717;ERATE=0.0004;THETA=0.0059;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2752763 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.734;LDAF=0.0024;AVGPOST=0.9982;RSQ=0.6710;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2752830 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.905;LDAF=0.0185;AVGPOST=0.9892;RSQ=0.7842;ERATE=0.0013;THETA=0.0045;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 2753083 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0053;AVGPOST=0.9994;RSQ=0.9468;ERATE=0.0004;THETA=0.0164;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2753138 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0064;AVGPOST=0.9970;RSQ=0.8269;ERATE=0.0008;THETA=0.0022;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2753189 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0056;AVGPOST=0.9995;RSQ=0.9588;ERATE=0.0004;THETA=0.0056;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2753227 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.932;LDAF=0.0555;AVGPOST=0.9920;RSQ=0.9440;ERATE=0.0009;THETA=0.0014;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 2753237 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.981;LDAF=0.4381;AVGPOST=0.9808;RSQ=0.9702;ERATE=0.0058;THETA=0.0009;AC=956;AN=2184 GT:DS:GL:BD 0.43772894 0
1 2753268 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0064;AVGPOST=0.9971;RSQ=0.8088;ERATE=0.0007;THETA=0.0061;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2753276 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.877;LDAF=0.0203;AVGPOST=0.9936;RSQ=0.8904;ERATE=0.0005;THETA=0.0026;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 2753278 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.896;LDAF=0.0254;AVGPOST=0.9931;RSQ=0.9053;ERATE=0.0004;THETA=0.0100;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 2753327 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0282;AVGPOST=0.9992;RSQ=0.9878;ERATE=0.0004;THETA=0.0059;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 2753372 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.984;LDAF=0.4950;AVGPOST=0.9870;RSQ=0.9791;ERATE=0.0010;THETA=0.0005;AC=1082;AN=2184 GT:DS:GL:BD 0.49542123 0
1 2753379 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0478;AVGPOST=0.9981;RSQ=0.9866;ERATE=0.0004;THETA=0.0047;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 2753384 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6893;ERATE=0.0004;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2753400 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.796;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.7849;ERATE=0.0004;THETA=0.0067;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2753456 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0039;AVGPOST=0.9967;RSQ=0.6595;ERATE=0.0004;THETA=0.0023;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2753527 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0024;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2753532 . A AT 334 PASS INDEL;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0070;AVGPOST=0.9975;RSQ=0.8370;ERATE=0.0009;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2753611 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0026;AVGPOST=0.9983;RSQ=0.7478;ERATE=0.0005;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2753704 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0024;AVGPOST=0.9991;RSQ=0.8455;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2753718 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2753746 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9654;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2753806 . TTATTTC T 415 PASS INDEL;BAVGPOST=0.999;BRSQ=0.773;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8363;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2753867 . TAG T 99 PASS INDEL;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0023;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2753870 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.897;LDAF=0.0376;AVGPOST=0.9935;RSQ=0.9308;ERATE=0.0011;THETA=0.0003;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 2754011 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2754058 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0024;AVGPOST=0.9985;RSQ=0.7603;ERATE=0.0003;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2754063 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.979;LDAF=0.8177;AVGPOST=0.9935;RSQ=0.9843;ERATE=0.0005;THETA=0.0008;AC=1783;AN=2184 GT:DS:GL:BD 0.81639194 1
1 2754164 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0378;AVGPOST=0.9975;RSQ=0.9726;ERATE=0.0006;THETA=0.0006;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 2754188 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.3441;AVGPOST=0.9972;RSQ=0.9955;ERATE=0.0004;THETA=0.0006;AC=750;AN=2184 GT:DS:GL:BD 0.34340659 0
1 2754302 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2754406 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.4343;AVGPOST=0.9939;RSQ=0.9902;ERATE=0.0009;THETA=0.0005;AC=947;AN=2184 GT:DS:GL:BD 0.43360806 0
1 2754453 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2754465 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7735;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2754512 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3435;AVGPOST=0.9958;RSQ=0.9933;ERATE=0.0005;THETA=0.0006;AC=748;AN=2184 GT:DS:GL:BD 0.34249085 0
1 2754582 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6318;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2754612 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0028;AVGPOST=0.9963;RSQ=0.5385;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2754613 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2754623 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8538;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2754647 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0017;AVGPOST=0.9986;RSQ=0.6895;ERATE=0.0004;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2754652 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8082;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2754677 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0202;AVGPOST=0.9998;RSQ=0.9957;ERATE=0.0004;THETA=0.0009;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 2754771 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0373;AVGPOST=0.9988;RSQ=0.9852;ERATE=0.0004;THETA=0.0005;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 2754818 . CT C 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0020;AVGPOST=0.9970;RSQ=0.4839;ERATE=0.0007;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2754909 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0208;AVGPOST=0.9986;RSQ=0.9705;ERATE=0.0004;THETA=0.0027;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 2754953 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0074;AVGPOST=0.9945;RSQ=0.7294;ERATE=0.0009;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2754980 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.987;LDAF=0.4322;AVGPOST=0.9863;RSQ=0.9772;ERATE=0.0013;THETA=0.0066;AC=945;AN=2184 GT:DS:GL:BD 0.43269232 0
1 2755011 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0076;AVGPOST=0.9962;RSQ=0.7983;ERATE=0.0004;THETA=0.0042;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2755141 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.721;LDAF=0.0031;AVGPOST=0.9973;RSQ=0.6420;ERATE=0.0005;THETA=0.0019;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2755142 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0219;AVGPOST=0.9977;RSQ=0.9582;ERATE=0.0005;THETA=0.0008;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 2755253 . T TA 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5162;ERATE=0.0005;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2755279 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.786;LDAF=0.0046;AVGPOST=0.9968;RSQ=0.7258;ERATE=0.0006;THETA=0.0014;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2755280 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.6249;ERATE=0.0005;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2755297 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.956;LDAF=0.4181;AVGPOST=0.9704;RSQ=0.9545;ERATE=0.0013;THETA=0.0089;AC=913;AN=2184 GT:DS:GL:BD 0.41804031 0
1 2755355 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8237;ERATE=0.0003;THETA=0.0109;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2755503 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0044;AVGPOST=0.9986;RSQ=0.8617;ERATE=0.0005;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2755540 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7847;ERATE=0.0004;THETA=0.0037;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2755557 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7309;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2755586 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.651;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6398;ERATE=0.0003;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2755590 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0015;AVGPOST=0.9978;RSQ=0.3921;ERATE=0.0004;THETA=0.0065;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2755757 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0061;AVGPOST=0.9995;RSQ=0.9645;ERATE=0.0003;THETA=0.0027;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2755773 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.9608;AVGPOST=0.9969;RSQ=0.9720;ERATE=0.0004;THETA=0.0011;AC=2098;AN=2184 GT:DS:GL:BD 0.96062273 1
1 2755807 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5756;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2755908 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.610;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5838;ERATE=0.0005;THETA=0.0074;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2755909 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.953;LDAF=0.0112;AVGPOST=0.9979;RSQ=0.9218;ERATE=0.0004;THETA=0.0010;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 2756038 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.555;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0045;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2756210 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5354;ERATE=0.0005;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2756211 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0026;AVGPOST=0.9984;RSQ=0.7704;ERATE=0.0003;THETA=0.0021;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2756288 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4672;AVGPOST=0.9979;RSQ=0.9960;ERATE=0.0004;THETA=0.0003;AC=1020;AN=2184 GT:DS:GL:BD 0.46703297 0
1 2756289 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.782;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5855;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2756356 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0047;AVGPOST=0.9979;RSQ=0.8172;ERATE=0.0005;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2756397 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.984;LDAF=0.4918;AVGPOST=0.9917;RSQ=0.9866;ERATE=0.0009;THETA=0.0010;AC=1072;AN=2184 GT:DS:GL:BD 0.49084249 0
1 2756450 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7966;ERATE=0.0004;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2756473 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0116;AVGPOST=0.9997;RSQ=0.9895;ERATE=0.0003;THETA=0.0014;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 2756494 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2756621 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4595;AVGPOST=0.9963;RSQ=0.9933;ERATE=0.0008;THETA=0.0007;AC=1002;AN=2184 GT:DS:GL:BD 0.45879120 0
1 2756766 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0390;AVGPOST=0.9989;RSQ=0.9878;ERATE=0.0003;THETA=0.0011;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 2756770 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2756801 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5682;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2756807 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4692;AVGPOST=0.9985;RSQ=0.9971;ERATE=0.0006;THETA=0.0005;AC=1025;AN=2184 GT:DS:GL:BD 0.46932235 0
1 2756815 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0038;AVGPOST=0.9998;RSQ=0.9710;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2756835 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.848;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.8663;ERATE=0.0004;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2756869 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0086;AVGPOST=0.9997;RSQ=0.9864;ERATE=0.0003;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 2756870 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.8240;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2756889 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4716;AVGPOST=0.9971;RSQ=0.9945;ERATE=0.0006;THETA=0.0029;AC=1031;AN=2184 GT:DS:GL:BD 0.47206959 0
1 2756940 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0055;AVGPOST=0.9988;RSQ=0.9081;ERATE=0.0004;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2756966 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0052;AVGPOST=0.9996;RSQ=0.9660;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2756976 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0040;AVGPOST=0.9996;RSQ=0.9647;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2756977 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0216;AVGPOST=0.9997;RSQ=0.9937;ERATE=0.0003;THETA=0.0005;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 2757035 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0115;AVGPOST=0.9999;RSQ=0.9946;ERATE=0.0003;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 2757099 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0381;AVGPOST=0.9995;RSQ=0.9938;ERATE=0.0003;THETA=0.0006;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 2757103 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0630;AVGPOST=0.9975;RSQ=0.9852;ERATE=0.0003;THETA=0.0005;AC=136;AN=2184 GT:DS:GL:BD 0.06227106 0
1 2757162 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.766;LDAF=0.0038;AVGPOST=0.9979;RSQ=0.7620;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2757163 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5650;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2757196 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.4712;AVGPOST=0.9852;RSQ=0.9757;ERATE=0.0022;THETA=0.0009;AC=1025;AN=2184 GT:DS:GL:BD 0.46932235 0
1 2757299 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.6440;ERATE=0.0004;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2757353 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2757401 rs70956341 A AGTGT 51184 PASS INDEL;BAVGPOST=0.958;BRSQ=0.922;LDAF=0.4359;AVGPOST=0.9405;RSQ=0.9095;ERATE=0.0158;THETA=0.0007;AC=968;AN=2184 GT:DS:GL:BD 0.44322345 0
1 2757449 . A AGT 11062 PASS INDEL;BAVGPOST=0.883;BRSQ=0.790;LDAF=0.3364;AVGPOST=0.8747;RSQ=0.8019;ERATE=0.0278;THETA=0.0011;AC=733;AN=2184 GT:DS:GL:BD 0.33562270 0
1 2757466 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0031;AVGPOST=0.9986;RSQ=0.8587;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2757507 . TGA T 5251 PASS INDEL;BAVGPOST=0.894;BRSQ=0.781;LDAF=0.2368;AVGPOST=0.8915;RSQ=0.8075;ERATE=0.0080;THETA=0.0005;AC=519;AN=2184 GT:DS:GL:BD 0.23763736 0
1 2757521 . A AGT 1661 PASS INDEL;BAVGPOST=0.958;BRSQ=0.713;LDAF=0.0848;AVGPOST=0.9376;RSQ=0.6874;ERATE=0.0162;THETA=0.0005;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 2757538 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.875;LDAF=0.0077;AVGPOST=0.9948;RSQ=0.7422;ERATE=0.0005;THETA=0.0013;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2757573 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0115;AVGPOST=0.9998;RSQ=0.9911;ERATE=0.0003;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 2757587 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.896;LDAF=0.0024;AVGPOST=0.9991;RSQ=0.8939;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2757675 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0507;AVGPOST=0.9985;RSQ=0.9882;ERATE=0.0004;THETA=0.0007;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 2757702 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4566;AVGPOST=0.9970;RSQ=0.9949;ERATE=0.0006;THETA=0.0025;AC=996;AN=2184 GT:DS:GL:BD 0.45604396 0
1 2757732 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3485;AVGPOST=0.9980;RSQ=0.9968;ERATE=0.0004;THETA=0.0007;AC=760;AN=2184 GT:DS:GL:BD 0.34798536 0
1 2757750 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4563;AVGPOST=0.9981;RSQ=0.9965;ERATE=0.0005;THETA=0.0061;AC=996;AN=2184 GT:DS:GL:BD 0.45604396 0
1 2757800 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4574;AVGPOST=0.9980;RSQ=0.9969;ERATE=0.0004;THETA=0.0007;AC=999;AN=2184 GT:DS:GL:BD 0.45741758 0
1 2757902 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7186;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2758150 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9417;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2758184 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.996;LDAF=0.3922;AVGPOST=0.9939;RSQ=0.9907;ERATE=0.0007;THETA=0.0032;AC=855;AN=2184 GT:DS:GL:BD 0.39148352 0
1 2758304 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7727;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2758364 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7012;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2758511 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5994;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2758663 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5935;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2758673 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.8253;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2758749 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5620;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2758768 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0130;AVGPOST=0.9985;RSQ=0.9506;ERATE=0.0003;THETA=0.0006;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 2758826 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7828;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2758850 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5542;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2758887 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.880;LDAF=0.0046;AVGPOST=0.9996;RSQ=0.9652;ERATE=0.0003;THETA=0.0011;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2758893 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3735;AVGPOST=0.9946;RSQ=0.9916;ERATE=0.0004;THETA=0.0039;AC=814;AN=2184 GT:DS:GL:BD 0.37271062 0
1 2758907 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7051;ERATE=0.0003;THETA=0.0062;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2758908 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2759014 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6208;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2759016 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0036;AVGPOST=0.9995;RSQ=0.9389;ERATE=0.0004;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2759082 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.800;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8789;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2759102 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0014;AVGPOST=0.9993;RSQ=0.7811;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2759136 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0099;AVGPOST=0.9982;RSQ=0.9288;ERATE=0.0003;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2759137 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0231;AVGPOST=0.9976;RSQ=0.9634;ERATE=0.0004;THETA=0.0006;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 2759228 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2759262 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6208;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2759302 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0102;AVGPOST=0.9980;RSQ=0.9184;ERATE=0.0005;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 2759334 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0103;AVGPOST=0.9991;RSQ=0.9619;ERATE=0.0004;THETA=0.0010;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 2759355 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0223;AVGPOST=0.9993;RSQ=0.9861;ERATE=0.0003;THETA=0.0007;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 2759405 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.757;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4958;ERATE=0.0005;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2759430 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6867;ERATE=0.0003;THETA=0.0042;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2759550 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.702;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7023;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2759601 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0018;AVGPOST=0.9978;RSQ=0.5236;ERATE=0.0004;THETA=0.0018;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2759712 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0128;AVGPOST=0.9972;RSQ=0.9121;ERATE=0.0006;THETA=0.0010;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 2759713 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.934;LDAF=0.0169;AVGPOST=0.9959;RSQ=0.8959;ERATE=0.0005;THETA=0.0011;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 2759791 . AAT A 960 PASS INDEL;BAVGPOST=0.915;BRSQ=0.519;LDAF=0.1461;AVGPOST=0.8588;RSQ=0.5092;ERATE=0.0407;THETA=0.0019;AC=195;AN=2184 GT:DS:GL:BD 0.08928572 0
1 2759806 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.957;LDAF=0.3773;AVGPOST=0.9565;RSQ=0.9290;ERATE=0.0074;THETA=0.0025;AC=820;AN=2184 GT:DS:GL:BD 0.37545788 0
1 2759816 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.825;LDAF=0.0075;AVGPOST=0.9951;RSQ=0.7572;ERATE=0.0006;THETA=0.0017;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 2759855 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.960;LDAF=0.3354;AVGPOST=0.9819;RSQ=0.9713;ERATE=0.0010;THETA=0.0007;AC=731;AN=2184 GT:DS:GL:BD 0.33470696 0
1 2759856 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.838;LDAF=0.0071;AVGPOST=0.9975;RSQ=0.8717;ERATE=0.0004;THETA=0.0010;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2759985 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.923;BRSQ=0.810;LDAF=0.2131;AVGPOST=0.9457;RSQ=0.8859;ERATE=0.0010;THETA=0.0039;AC=456;AN=2184 GT:DS:GL:BD 0.20879121 0
1 2759998 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.745;LDAF=0.0029;AVGPOST=0.9969;RSQ=0.5965;ERATE=0.0005;THETA=0.0025;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2760030 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0037;AVGPOST=0.9984;RSQ=0.8360;ERATE=0.0005;THETA=0.0015;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2760036 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0017;AVGPOST=0.9979;RSQ=0.5190;ERATE=0.0006;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2760083 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0052;AVGPOST=0.9973;RSQ=0.8052;ERATE=0.0006;THETA=0.0021;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2760085 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.827;LDAF=0.0080;AVGPOST=0.9953;RSQ=0.7769;ERATE=0.0004;THETA=0.0012;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2760086 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.680;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6358;ERATE=0.0003;THETA=0.0030;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2760093 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.768;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8435;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2760131 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6567;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2760193 . ATTG A 213 PASS INDEL;BAVGPOST=0.999;BRSQ=0.777;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.6927;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2760253 . A AATTT 151 PASS INDEL;BAVGPOST=1.000;BRSQ=0.732;LDAF=0.0026;AVGPOST=0.9957;RSQ=0.4171;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2760321 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0005;AVGPOST=0.9993;RSQ=0.4209;ERATE=0.0004;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2760334 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.799;LDAF=0.0025;AVGPOST=0.9993;RSQ=0.8669;ERATE=0.0005;THETA=0.0026;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2760380 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0004;THETA=0.0046;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2760496 rs79792438 TA T 1226 PASS INDEL;BAVGPOST=0.997;BRSQ=0.891;LDAF=0.0099;AVGPOST=0.9981;RSQ=0.9172;ERATE=0.0004;THETA=0.0050;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2760555 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.688;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.6699;ERATE=0.0004;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2760567 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.712;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.4655;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2760602 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.772;LDAF=0.0062;AVGPOST=0.9967;RSQ=0.7768;ERATE=0.0005;THETA=0.0032;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2760620 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5429;ERATE=0.0004;THETA=0.0048;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2760772 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8665;ERATE=0.0003;THETA=0.0079;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2761070 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2761239 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0019;AVGPOST=0.9994;RSQ=0.8612;ERATE=0.0004;THETA=0.0029;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2761266 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.9300;ERATE=0.0003;THETA=0.0033;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2761345 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5602;ERATE=0.0004;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2761375 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3739;AVGPOST=0.9982;RSQ=0.9963;ERATE=0.0003;THETA=0.0011;AC=817;AN=2184 GT:DS:GL:BD 0.37408423 0
1 2761377 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8559;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2761398 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.870;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7477;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2761427 . C CT 144 PASS INDEL;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2761530 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.956;LDAF=0.3876;AVGPOST=0.9872;RSQ=0.9788;ERATE=0.0005;THETA=0.0005;AC=854;AN=2184 GT:DS:GL:BD 0.39102563 0
1 2761532 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.956;LDAF=0.3666;AVGPOST=0.9862;RSQ=0.9770;ERATE=0.0006;THETA=0.0005;AC=808;AN=2184 GT:DS:GL:BD 0.36996338 0
1 2761573 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5357;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2761608 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.933;LDAF=0.3667;AVGPOST=0.9768;RSQ=0.9598;ERATE=0.0023;THETA=0.0007;AC=803;AN=2184 GT:DS:GL:BD 0.36767399 0
1 2761609 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.824;LDAF=0.0042;AVGPOST=0.9956;RSQ=0.5527;ERATE=0.0011;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2761616 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0034;AVGPOST=0.9987;RSQ=0.8258;ERATE=0.0006;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2761620 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0082;AVGPOST=0.9963;RSQ=0.8324;ERATE=0.0005;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2761660 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.648;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8205;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2761780 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5932;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2761796 rs58442790 A AC 3085 PASS INDEL;BAVGPOST=0.873;BRSQ=0.749;LDAF=0.2636;AVGPOST=0.8920;RSQ=0.8061;ERATE=0.0058;THETA=0.0010;AC=598;AN=2184 GT:DS:GL:BD 0.27380952 0
1 2761849 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2761863 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.3748;AVGPOST=0.9979;RSQ=0.9958;ERATE=0.0004;THETA=0.0005;AC=817;AN=2184 GT:DS:GL:BD 0.37408423 0
1 2761882 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2761895 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0106;AVGPOST=0.9983;RSQ=0.9328;ERATE=0.0004;THETA=0.0024;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 2761931 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0062;AVGPOST=0.9979;RSQ=0.8646;ERATE=0.0005;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2762019 . CCCT C 36 PASS INDEL;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4435;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2762048 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2762085 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6007;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2762088 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0065;AVGPOST=0.9997;RSQ=0.9809;ERATE=0.0003;THETA=0.0016;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2762150 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6710;ERATE=0.0004;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2762293 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6999;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2762362 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7350;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2762476 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0063;AVGPOST=0.9976;RSQ=0.8756;ERATE=0.0004;THETA=0.0009;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2762540 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0029;AVGPOST=0.9985;RSQ=0.7862;ERATE=0.0008;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2762607 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0020;AVGPOST=0.9972;RSQ=0.4991;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2762633 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4967;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2762657 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0024;AVGPOST=0.9990;RSQ=0.8464;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2762679 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.835;LDAF=0.0051;AVGPOST=0.9957;RSQ=0.7034;ERATE=0.0004;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2762722 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0026;AVGPOST=0.9996;RSQ=0.9427;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2762729 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0026;AVGPOST=0.9996;RSQ=0.9349;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2762761 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=0.9997;RSQ=0.9463;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2762768 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9992;RSQ=0.8831;ERATE=0.0003;THETA=0.0027;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2762832 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.0072;AVGPOST=0.9964;RSQ=0.8307;ERATE=0.0007;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 2762910 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.931;LDAF=0.1046;AVGPOST=0.9860;RSQ=0.9424;ERATE=0.0007;THETA=0.0010;AC=225;AN=2184 GT:DS:GL:BD 0.10302198 0
1 2763009 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.752;LDAF=0.0018;AVGPOST=0.9976;RSQ=0.4598;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2763243 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0038;AVGPOST=0.9991;RSQ=0.9038;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2763269 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.997;LDAF=0.5941;AVGPOST=0.9957;RSQ=0.9926;ERATE=0.0006;THETA=0.0009;AC=1296;AN=2184 GT:DS:GL:BD 0.59340662 1
1 2763298 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0027;AVGPOST=0.9997;RSQ=0.9523;ERATE=0.0003;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2763310 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2763315 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2763316 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6639;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2763357 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0037;AVGPOST=0.9997;RSQ=0.9650;ERATE=0.0003;THETA=0.0011;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2763381 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.6011;AVGPOST=0.9920;RSQ=0.9863;ERATE=0.0007;THETA=0.0011;AC=1312;AN=2184 GT:DS:GL:BD 0.60073262 1
1 2763474 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7217;ERATE=0.0004;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2763624 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0015;AVGPOST=0.9983;RSQ=0.5111;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2763625 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.880;LDAF=0.0041;AVGPOST=0.9981;RSQ=0.8120;ERATE=0.0006;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2763707 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6426;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2763850 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.753;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.7460;ERATE=0.0004;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2763883 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.756;LDAF=0.0025;AVGPOST=0.9977;RSQ=0.6974;ERATE=0.0004;THETA=0.0026;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2763905 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2763916 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.777;LDAF=0.0071;AVGPOST=0.9982;RSQ=0.8866;ERATE=0.0004;THETA=0.0023;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2763954 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.5927;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2763995 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.8090;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2764068 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.980;LDAF=0.3425;AVGPOST=0.9915;RSQ=0.9858;ERATE=0.0004;THETA=0.0004;AC=743;AN=2184 GT:DS:GL:BD 0.34020147 0
1 2764142 rs36202379 ATTGTCTGC A 20851 PASS INDEL;BAVGPOST=0.838;BRSQ=0.710;LDAF=0.3242;AVGPOST=0.8293;RSQ=0.7151;ERATE=0.0214;THETA=0.0011;AC=662;AN=2184 GT:DS:GL:BD 0.30311355 0
1 2764156 rs56706057 TG T 1038 PASS INDEL;BAVGPOST=0.834;BRSQ=0.495;LDAF=0.1505;AVGPOST=0.8618;RSQ=0.5885;ERATE=0.0121;THETA=0.0028;AC=250;AN=2184 GT:DS:GL:BD 0.11446887 0
1 2764172 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.918;LDAF=0.9815;AVGPOST=0.9934;RSQ=0.8603;ERATE=0.0009;THETA=0.0007;AC=2148;AN=2184 GT:DS:GL:BD 0.98351645 1
1 2764177 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.686;LDAF=0.0026;AVGPOST=0.9980;RSQ=0.6732;ERATE=0.0007;THETA=0.0016;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2764182 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.767;LDAF=0.0032;AVGPOST=0.9973;RSQ=0.6334;ERATE=0.0005;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2764301 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0016;AVGPOST=0.9988;RSQ=0.6904;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2764323 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.989;LDAF=0.6744;AVGPOST=0.9907;RSQ=0.9838;ERATE=0.0021;THETA=0.0009;AC=1471;AN=2184 GT:DS:GL:BD 0.67353481 1
1 2764417 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.626;LDAF=0.0036;AVGPOST=0.9973;RSQ=0.6853;ERATE=0.0012;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2764438 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.9713;AVGPOST=0.9983;RSQ=0.9800;ERATE=0.0004;THETA=0.0013;AC=2122;AN=2184 GT:DS:GL:BD 0.97161174 1
1 2764511 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.510;LDAF=0.0021;AVGPOST=0.9973;RSQ=0.5299;ERATE=0.0005;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2764593 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0046;AVGPOST=0.9978;RSQ=0.8046;ERATE=0.0003;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2764611 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.507;LDAF=0.0028;AVGPOST=0.9956;RSQ=0.3610;ERATE=0.0010;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2764761 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.816;LDAF=0.0234;AVGPOST=0.9909;RSQ=0.8448;ERATE=0.0005;THETA=0.0003;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 2764779 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.878;LDAF=0.0149;AVGPOST=0.9953;RSQ=0.8944;ERATE=0.0007;THETA=0.0009;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 2764799 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0014;AVGPOST=0.9992;RSQ=0.7703;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2764906 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6432;ERATE=0.0005;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2764913 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.6283;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2764938 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.795;LDAF=0.0092;AVGPOST=0.9958;RSQ=0.8260;ERATE=0.0003;THETA=0.0009;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 2764963 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0030;AVGPOST=0.9968;RSQ=0.6817;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2764999 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.881;LDAF=0.0370;AVGPOST=0.9927;RSQ=0.9150;ERATE=0.0005;THETA=0.0005;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 2765050 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0076;AVGPOST=0.9976;RSQ=0.8821;ERATE=0.0003;THETA=0.0013;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2765089 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2988;AVGPOST=0.9959;RSQ=0.9929;ERATE=0.0005;THETA=0.0005;AC=651;AN=2184 GT:DS:GL:BD 0.29807693 0
1 2765170 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0052;AVGPOST=0.9977;RSQ=0.8369;ERATE=0.0004;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2765171 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2979;AVGPOST=0.9957;RSQ=0.9929;ERATE=0.0004;THETA=0.0004;AC=649;AN=2184 GT:DS:GL:BD 0.29716116 0
1 2765300 rs71248848 T TA 43390 PASS INDEL;BAVGPOST=0.994;BRSQ=0.987;LDAF=0.6168;AVGPOST=0.9872;RSQ=0.9778;ERATE=0.0028;THETA=0.0003;AC=1347;AN=2184 GT:DS:GL:BD 0.61675823 1
1 2765400 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.731;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.5762;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2765494 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.562;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8602;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2766166 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.725;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6094;ERATE=0.0004;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2766314 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2970;AVGPOST=0.9975;RSQ=0.9953;ERATE=0.0004;THETA=0.0012;AC=647;AN=2184 GT:DS:GL:BD 0.29624543 0
1 2766391 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0119;AVGPOST=0.9996;RSQ=0.9863;ERATE=0.0004;THETA=0.0002;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 2766430 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8605;ERATE=0.0004;THETA=0.0035;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2766582 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.752;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.6352;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2766640 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2766814 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2766827 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2766867 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9079;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2766933 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7585;ERATE=0.0006;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2766968 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5994;ERATE=0.0004;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2766969 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9159;ERATE=0.0004;THETA=0.0046;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2766971 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9388;AVGPOST=0.9994;RSQ=0.9957;ERATE=0.0004;THETA=0.0009;AC=2050;AN=2184 GT:DS:GL:BD 0.93864471 1
1 2766974 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8549;ERATE=0.0003;THETA=0.0023;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2766989 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0066;AVGPOST=0.9995;RSQ=0.9639;ERATE=0.0004;THETA=0.0009;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2767111 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.950;LDAF=0.0229;AVGPOST=0.9985;RSQ=0.9744;ERATE=0.0005;THETA=0.0004;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 2767201 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9389;AVGPOST=0.9993;RSQ=0.9957;ERATE=0.0004;THETA=0.0006;AC=2050;AN=2184 GT:DS:GL:BD 0.93864471 1
1 2767309 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0100;AVGPOST=0.9992;RSQ=0.9646;ERATE=0.0005;THETA=0.0010;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 2767381 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0141;AVGPOST=0.9990;RSQ=0.9686;ERATE=0.0004;THETA=0.0017;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 2767413 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8544;ERATE=0.0010;THETA=0.0012;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2767490 . TGTTA T 2841 PASS INDEL;BAVGPOST=0.997;BRSQ=0.876;LDAF=0.0138;AVGPOST=0.9982;RSQ=0.9390;ERATE=0.0005;THETA=0.0033;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 2767540 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0004;AVGPOST=0.9997;RSQ=0.7164;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2767575 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2767594 . G GTGTC 116 PASS INDEL;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2767631 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.728;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.7391;ERATE=0.0004;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2767651 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5305;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2767703 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.9697;AVGPOST=0.9979;RSQ=0.9756;ERATE=0.0005;THETA=0.0010;AC=2120;AN=2184 GT:DS:GL:BD 0.97069597 1
1 2767726 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.797;LDAF=0.0021;AVGPOST=0.9988;RSQ=0.7608;ERATE=0.0004;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2767842 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.736;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4999;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2767864 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.363;LDAF=0.0022;AVGPOST=0.9978;RSQ=0.6056;ERATE=0.0007;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2767931 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0016;AVGPOST=0.9988;RSQ=0.7421;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2767963 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.691;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5118;ERATE=0.0006;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2768008 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2768208 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0018;AVGPOST=0.9996;RSQ=0.9122;ERATE=0.0003;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2768345 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.888;LDAF=0.0054;AVGPOST=0.9990;RSQ=0.9186;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2768419 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0005;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2768531 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7986;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2768554 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0071;AVGPOST=0.9969;RSQ=0.8421;ERATE=0.0008;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 2768622 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.835;BRSQ=0.488;LDAF=0.2511;AVGPOST=0.8074;RSQ=0.5375;ERATE=0.0587;THETA=0.0011;AC=412;AN=2184 GT:DS:GL:BD 0.18864469 0
1 2768646 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.761;BRSQ=0.412;LDAF=0.2500;AVGPOST=0.7757;RSQ=0.5580;ERATE=0.0230;THETA=0.0010;AC=420;AN=2184 GT:DS:GL:BD 0.19230770 0
1 2768649 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.820;BRSQ=0.284;LDAF=0.1440;AVGPOST=0.8409;RSQ=0.5242;ERATE=0.0093;THETA=0.0008;AC=209;AN=2184 GT:DS:GL:BD 0.09569597 0
1 2768684 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.834;LDAF=0.0050;AVGPOST=0.9971;RSQ=0.7556;ERATE=0.0005;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2768737 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5198;ERATE=0.0003;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2768891 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.752;BRSQ=0.585;LDAF=0.3874;AVGPOST=0.7824;RSQ=0.6172;ERATE=0.0735;THETA=0.0008;AC=792;AN=2184 GT:DS:GL:BD 0.36263737 0
1 2768977 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0059;AVGPOST=0.9956;RSQ=0.6732;ERATE=0.0010;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2769022 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.882;BRSQ=0.789;LDAF=0.3652;AVGPOST=0.8756;RSQ=0.8159;ERATE=0.0114;THETA=0.0006;AC=732;AN=2184 GT:DS:GL:BD 0.33516484 0
1 2769270 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.459;BRSQ=0.132;LDAF=0.5024;AVGPOST=0.6398;RSQ=0.3699;ERATE=0.0359;THETA=0.0026;AC=1086;AN=2184 GT:DS:GL:BD 0.49725273 0
1 2769512 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0055;AVGPOST=0.9991;RSQ=0.9283;ERATE=0.0004;THETA=0.0022;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2769542 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9388;AVGPOST=0.9996;RSQ=0.9976;ERATE=0.0003;THETA=0.0009;AC=2050;AN=2184 GT:DS:GL:BD 0.93864471 1
1 2769746 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0140;AVGPOST=0.9992;RSQ=0.9730;ERATE=0.0004;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 2769933 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.3022;AVGPOST=0.9930;RSQ=0.9868;ERATE=0.0006;THETA=0.0015;AC=659;AN=2184 GT:DS:GL:BD 0.30173993 0
1 2769934 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0023;AVGPOST=0.9993;RSQ=0.8857;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2770032 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6460;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2770103 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.762;LDAF=0.0018;AVGPOST=0.9975;RSQ=0.4898;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2770169 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7038;ERATE=0.0005;THETA=0.0021;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2770182 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.844;LDAF=0.9111;AVGPOST=0.9611;RSQ=0.8401;ERATE=0.0116;THETA=0.0010;AC=2013;AN=2184 GT:DS:GL:BD 0.92170328 1
1 2770183 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0050;AVGPOST=0.9973;RSQ=0.7755;ERATE=0.0007;THETA=0.0015;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2770291 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0006;AVGPOST=0.9989;RSQ=0.3052;ERATE=0.0004;THETA=0.0009;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 2770400 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.742;LDAF=0.0024;AVGPOST=0.9986;RSQ=0.7319;ERATE=0.0007;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2770660 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.6834;ERATE=0.0005;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2770693 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0043;AVGPOST=0.9978;RSQ=0.8052;ERATE=0.0006;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2770695 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0142;AVGPOST=0.9989;RSQ=0.9649;ERATE=0.0004;THETA=0.0010;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 2770741 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.809;LDAF=0.0040;AVGPOST=0.9977;RSQ=0.7599;ERATE=0.0010;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2770786 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0047;AVGPOST=0.9989;RSQ=0.9113;ERATE=0.0003;THETA=0.0011;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2770894 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.604;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.7478;ERATE=0.0006;THETA=0.0014;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2770897 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0082;AVGPOST=0.9990;RSQ=0.9495;ERATE=0.0004;THETA=0.0011;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2770927 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4360;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2771055 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0093;AVGPOST=0.9987;RSQ=0.9490;ERATE=0.0004;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 2771086 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2771145 . GC G 5813 PASS INDEL;BAVGPOST=0.834;BRSQ=0.258;LDAF=0.8059;AVGPOST=0.7516;RSQ=0.3425;ERATE=0.0434;THETA=0.0010;AC=1940;AN=2184 GT:DS:GL:BD 0.88827837 1
1 2771326 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3014;AVGPOST=0.9958;RSQ=0.9916;ERATE=0.0006;THETA=0.0008;AC=657;AN=2184 GT:DS:GL:BD 0.30082417 0
1 2771334 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.762;LDAF=0.0076;AVGPOST=0.9986;RSQ=0.9127;ERATE=0.0004;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 2771371 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.653;LDAF=0.0071;AVGPOST=0.9929;RSQ=0.6207;ERATE=0.0005;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 2771378 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0054;AVGPOST=0.9985;RSQ=0.8801;ERATE=0.0005;THETA=0.0013;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2771504 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3019;AVGPOST=0.9941;RSQ=0.9892;ERATE=0.0005;THETA=0.0007;AC=656;AN=2184 GT:DS:GL:BD 0.30036631 0
1 2771515 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3011;AVGPOST=0.9954;RSQ=0.9912;ERATE=0.0008;THETA=0.0008;AC=655;AN=2184 GT:DS:GL:BD 0.29990843 0
1 2771544 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.895;LDAF=0.0113;AVGPOST=0.9966;RSQ=0.8667;ERATE=0.0005;THETA=0.0015;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 2771615 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.709;LDAF=0.0293;AVGPOST=0.9888;RSQ=0.8410;ERATE=0.0004;THETA=0.0013;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 2771617 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.461;LDAF=0.0031;AVGPOST=0.9960;RSQ=0.4759;ERATE=0.0012;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2771623 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3025;AVGPOST=0.9951;RSQ=0.9908;ERATE=0.0007;THETA=0.0009;AC=657;AN=2184 GT:DS:GL:BD 0.30082417 0
1 2771656 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.3029;AVGPOST=0.9898;RSQ=0.9815;ERATE=0.0012;THETA=0.0006;AC=657;AN=2184 GT:DS:GL:BD 0.30082417 0
1 2771673 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.533;LDAF=0.0026;AVGPOST=0.9979;RSQ=0.6572;ERATE=0.0005;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2771678 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3020;AVGPOST=0.9963;RSQ=0.9926;ERATE=0.0007;THETA=0.0005;AC=657;AN=2184 GT:DS:GL:BD 0.30082417 0
1 2771679 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0063;AVGPOST=0.9969;RSQ=0.8042;ERATE=0.0005;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2771760 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0047;AVGPOST=0.9988;RSQ=0.8957;ERATE=0.0004;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2771823 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.664;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.5157;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2771873 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.745;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4160;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2771896 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.749;LDAF=0.0030;AVGPOST=0.9966;RSQ=0.5557;ERATE=0.0003;THETA=0.0046;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2772047 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.3040;AVGPOST=0.9895;RSQ=0.9810;ERATE=0.0011;THETA=0.0021;AC=659;AN=2184 GT:DS:GL:BD 0.30173993 0
1 2772110 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.490;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.5858;ERATE=0.0004;THETA=0.0027;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2772149 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.605;LDAF=0.0042;AVGPOST=0.9962;RSQ=0.6335;ERATE=0.0006;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2772153 . T TC 16 PASS INDEL;BAVGPOST=0.997;BRSQ=0.602;LDAF=0.0066;AVGPOST=0.9957;RSQ=0.7480;ERATE=0.0005;THETA=0.0012;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2772158 . C CA 200 PASS INDEL;BAVGPOST=0.997;BRSQ=0.613;LDAF=0.0049;AVGPOST=0.9987;RSQ=0.8826;ERATE=0.0003;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2772176 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0053;AVGPOST=0.9987;RSQ=0.8992;ERATE=0.0003;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2772177 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.784;LDAF=0.0091;AVGPOST=0.9945;RSQ=0.7550;ERATE=0.0009;THETA=0.0008;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2772194 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2983;AVGPOST=0.9952;RSQ=0.9917;ERATE=0.0004;THETA=0.0006;AC=649;AN=2184 GT:DS:GL:BD 0.29716116 0
1 2772302 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.507;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6145;ERATE=0.0006;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2772347 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.943;BRSQ=0.872;LDAF=0.2231;AVGPOST=0.9673;RSQ=0.9344;ERATE=0.0006;THETA=0.0087;AC=483;AN=2184 GT:DS:GL:BD 0.22115384 0
1 2772439 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.755;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4851;ERATE=0.0005;THETA=0.0061;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2772497 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.640;LDAF=0.0029;AVGPOST=0.9975;RSQ=0.6751;ERATE=0.0004;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2772609 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.630;LDAF=0.0012;AVGPOST=0.9983;RSQ=0.3524;ERATE=0.0004;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2772647 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.645;LDAF=0.0064;AVGPOST=0.9938;RSQ=0.6560;ERATE=0.0005;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2772798 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3008;AVGPOST=0.9918;RSQ=0.9849;ERATE=0.0007;THETA=0.0004;AC=655;AN=2184 GT:DS:GL:BD 0.29990843 0
1 2772918 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0160;AVGPOST=0.9981;RSQ=0.9639;ERATE=0.0003;THETA=0.0009;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 2772932 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.750;LDAF=0.0044;AVGPOST=0.9977;RSQ=0.7893;ERATE=0.0004;THETA=0.0013;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2772986 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0024;AVGPOST=0.9993;RSQ=0.8828;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2773084 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.833;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7276;ERATE=0.0006;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2773115 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5058;ERATE=0.0004;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2773148 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.803;LDAF=0.0121;AVGPOST=0.9905;RSQ=0.7076;ERATE=0.0005;THETA=0.0016;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2773255 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.968;LDAF=0.3001;AVGPOST=0.9895;RSQ=0.9816;ERATE=0.0011;THETA=0.0004;AC=655;AN=2184 GT:DS:GL:BD 0.29990843 0
1 2773296 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5574;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2773429 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.843;LDAF=0.0054;AVGPOST=0.9988;RSQ=0.8976;ERATE=0.0005;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2773475 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.5607;ERATE=0.0005;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2773489 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.6268;AVGPOST=0.9942;RSQ=0.9902;ERATE=0.0006;THETA=0.0006;AC=1368;AN=2184 GT:DS:GL:BD 0.62637365 1
1 2773507 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0021;AVGPOST=0.9975;RSQ=0.5236;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2773556 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0029;AVGPOST=0.9979;RSQ=0.7352;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2773566 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.987;LDAF=0.6174;AVGPOST=0.9917;RSQ=0.9848;ERATE=0.0010;THETA=0.0015;AC=1348;AN=2184 GT:DS:GL:BD 0.61721611 1
1 2773674 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.826;LDAF=0.0122;AVGPOST=0.9976;RSQ=0.9179;ERATE=0.0005;THETA=0.0007;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 2773695 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.934;LDAF=0.9860;AVGPOST=0.9970;RSQ=0.9120;ERATE=0.0005;THETA=0.0013;AC=2155;AN=2184 GT:DS:GL:BD 0.98672163 1
1 2773812 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.7008;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2773816 . TTG T 173 PASS INDEL;BAVGPOST=0.988;BRSQ=0.663;LDAF=0.0292;AVGPOST=0.9664;RSQ=0.5193;ERATE=0.0097;THETA=0.0007;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 2773927 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6437;ERATE=0.0004;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2773932 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5729;ERATE=0.0003;THETA=0.0057;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2774053 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.980;LDAF=0.3437;AVGPOST=0.9817;RSQ=0.9676;ERATE=0.0034;THETA=0.0029;AC=748;AN=2184 GT:DS:GL:BD 0.34249085 0
1 2774065 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.496;LDAF=0.0088;AVGPOST=0.9889;RSQ=0.4952;ERATE=0.0022;THETA=0.0012;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2774148 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0038;AVGPOST=0.9984;RSQ=0.8312;ERATE=0.0005;THETA=0.0030;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2774198 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0084;AVGPOST=0.9995;RSQ=0.9712;ERATE=0.0004;THETA=0.0010;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2774241 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.681;LDAF=0.0079;AVGPOST=0.9946;RSQ=0.7167;ERATE=0.0004;THETA=0.0038;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2774333 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0133;AVGPOST=0.9993;RSQ=0.9755;ERATE=0.0004;THETA=0.0039;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2774346 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0135;AVGPOST=0.9993;RSQ=0.9756;ERATE=0.0004;THETA=0.0015;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2774381 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.938;BRSQ=0.850;LDAF=0.1967;AVGPOST=0.9494;RSQ=0.8879;ERATE=0.0019;THETA=0.0018;AC=411;AN=2184 GT:DS:GL:BD 0.18818681 0
1 2774440 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.851;LDAF=0.0040;AVGPOST=0.9970;RSQ=0.6611;ERATE=0.0005;THETA=0.0021;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2774552 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7522;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2774679 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.548;LDAF=0.0103;AVGPOST=0.9872;RSQ=0.5319;ERATE=0.0031;THETA=0.0065;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2774734 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.860;LDAF=0.0285;AVGPOST=0.9911;RSQ=0.8846;ERATE=0.0005;THETA=0.0003;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 2774935 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.777;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4900;ERATE=0.0004;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2774985 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0079;AVGPOST=0.9996;RSQ=0.9750;ERATE=0.0003;THETA=0.0012;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2775011 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5246;ERATE=0.0003;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2775017 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.971;LDAF=0.0330;AVGPOST=0.9972;RSQ=0.9693;ERATE=0.0004;THETA=0.0059;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 2775109 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.830;LDAF=0.0047;AVGPOST=0.9989;RSQ=0.9159;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2775277 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6798;ERATE=0.0003;THETA=0.0023;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2775309 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0038;AVGPOST=0.9963;RSQ=0.6649;ERATE=0.0013;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2775328 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0047;AVGPOST=0.9994;RSQ=0.9421;ERATE=0.0004;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2775333 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8366;ERATE=0.0005;THETA=0.0064;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2775334 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.534;LDAF=0.0166;AVGPOST=0.9809;RSQ=0.5757;ERATE=0.0080;THETA=0.0010;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 2775335 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.765;LDAF=0.0017;AVGPOST=0.9987;RSQ=0.6649;ERATE=0.0004;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2775420 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0003;AVGPOST=0.9994;RSQ=0.1066;ERATE=0.0003;THETA=0.0008;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 2775531 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.890;LDAF=0.0140;AVGPOST=0.9967;RSQ=0.9144;ERATE=0.0006;THETA=0.0008;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2775683 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.756;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6671;ERATE=0.0005;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2775716 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.926;LDAF=0.0772;AVGPOST=0.9921;RSQ=0.9566;ERATE=0.0004;THETA=0.0031;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 2775732 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0120;AVGPOST=0.9994;RSQ=0.9772;ERATE=0.0004;THETA=0.0015;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 2775746 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2775803 . AAGGAG A 6264 PASS INDEL;BAVGPOST=0.856;BRSQ=0.607;LDAF=0.1949;AVGPOST=0.8770;RSQ=0.7325;ERATE=0.0066;THETA=0.0002;AC=393;AN=2184 GT:DS:GL:BD 0.17994505 0
1 2775953 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.937;LDAF=0.6458;AVGPOST=0.9422;RSQ=0.9069;ERATE=0.0179;THETA=0.0015;AC=1420;AN=2184 GT:DS:GL:BD 0.65018314 1
1 2776232 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.896;LDAF=0.0053;AVGPOST=0.9958;RSQ=0.6933;ERATE=0.0005;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2776233 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0050;AVGPOST=0.9978;RSQ=0.8499;ERATE=0.0005;THETA=0.0029;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2776261 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.814;LDAF=0.0042;AVGPOST=0.9968;RSQ=0.7170;ERATE=0.0008;THETA=0.0037;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2776262 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.726;LDAF=0.0216;AVGPOST=0.9866;RSQ=0.7398;ERATE=0.0012;THETA=0.0061;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 2776277 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.667;LDAF=0.0104;AVGPOST=0.9911;RSQ=0.6588;ERATE=0.0007;THETA=0.0053;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2776319 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.891;LDAF=0.0098;AVGPOST=0.9961;RSQ=0.8255;ERATE=0.0011;THETA=0.0063;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 2776321 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0004;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2776366 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.611;LDAF=0.0059;AVGPOST=0.9953;RSQ=0.6592;ERATE=0.0006;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2776663 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.5849;ERATE=0.0004;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2776736 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.830;LDAF=0.0050;AVGPOST=0.9981;RSQ=0.8443;ERATE=0.0004;THETA=0.0001;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2776761 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.960;BRSQ=0.937;LDAF=0.5521;AVGPOST=0.9678;RSQ=0.9555;ERATE=0.0007;THETA=0.0006;AC=1209;AN=2184 GT:DS:GL:BD 0.55357140 1
1 2776774 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.959;BRSQ=0.935;LDAF=0.5534;AVGPOST=0.9701;RSQ=0.9583;ERATE=0.0004;THETA=0.0009;AC=1216;AN=2184 GT:DS:GL:BD 0.55677658 1
1 2776777 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.959;BRSQ=0.934;LDAF=0.5506;AVGPOST=0.9685;RSQ=0.9563;ERATE=0.0006;THETA=0.0007;AC=1207;AN=2184 GT:DS:GL:BD 0.55265570 1
1 2776795 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.728;LDAF=0.0250;AVGPOST=0.9867;RSQ=0.7993;ERATE=0.0004;THETA=0.0007;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 2776803 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0085;AVGPOST=0.9989;RSQ=0.9405;ERATE=0.0004;THETA=0.0012;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2776829 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2776841 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.834;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8653;ERATE=0.0003;THETA=0.0065;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2776844 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0083;AVGPOST=0.9990;RSQ=0.9467;ERATE=0.0004;THETA=0.0047;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2776899 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0037;AVGPOST=0.9988;RSQ=0.8778;ERATE=0.0004;THETA=0.0027;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2776954 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.699;LDAF=0.0019;AVGPOST=0.9970;RSQ=0.3594;ERATE=0.0003;THETA=0.0041;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2777042 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.952;LDAF=0.2941;AVGPOST=0.9777;RSQ=0.9601;ERATE=0.0009;THETA=0.0011;AC=640;AN=2184 GT:DS:GL:BD 0.29304031 0
1 2777062 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.735;LDAF=0.0018;AVGPOST=0.9974;RSQ=0.4585;ERATE=0.0004;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2777127 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.821;LDAF=0.0116;AVGPOST=0.9970;RSQ=0.9038;ERATE=0.0006;THETA=0.0008;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 2777195 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.761;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5199;ERATE=0.0005;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2777310 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.858;LDAF=0.0119;AVGPOST=0.9954;RSQ=0.8679;ERATE=0.0007;THETA=0.0020;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 2777313 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.608;LDAF=0.0045;AVGPOST=0.9944;RSQ=0.4983;ERATE=0.0006;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2777326 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0088;AVGPOST=0.9992;RSQ=0.9560;ERATE=0.0005;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 2777413 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.701;LDAF=0.0061;AVGPOST=0.9970;RSQ=0.8074;ERATE=0.0005;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2777428 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0029;AVGPOST=0.9994;RSQ=0.8971;ERATE=0.0004;THETA=0.0025;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2777516 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9002;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2777572 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.764;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6393;ERATE=0.0004;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2777882 . T TG 58 PASS INDEL;BAVGPOST=0.999;BRSQ=0.767;LDAF=0.0101;AVGPOST=0.9912;RSQ=0.6416;ERATE=0.0012;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2777958 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.874;LDAF=0.0721;AVGPOST=0.9850;RSQ=0.9138;ERATE=0.0006;THETA=0.0011;AC=153;AN=2184 GT:DS:GL:BD 0.07005495 0
1 2777964 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.803;LDAF=0.0015;AVGPOST=0.9981;RSQ=0.4656;ERATE=0.0004;THETA=0.0040;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2778032 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.780;LDAF=0.0036;AVGPOST=0.9974;RSQ=0.6981;ERATE=0.0005;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2778059 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.858;LDAF=0.0256;AVGPOST=0.9893;RSQ=0.8312;ERATE=0.0004;THETA=0.0048;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 2778120 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0039;AVGPOST=0.9971;RSQ=0.7422;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2778125 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5910;ERATE=0.0004;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2778284 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.758;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.5746;ERATE=0.0008;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2778379 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0021;AVGPOST=0.9982;RSQ=0.6723;ERATE=0.0005;THETA=0.0020;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2778380 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.730;LDAF=0.0048;AVGPOST=0.9945;RSQ=0.5673;ERATE=0.0007;THETA=0.0020;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2778470 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.726;LDAF=0.0046;AVGPOST=0.9991;RSQ=0.9122;ERATE=0.0004;THETA=0.0012;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2778490 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.944;LDAF=0.0349;AVGPOST=0.9964;RSQ=0.9607;ERATE=0.0005;THETA=0.0007;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 2778507 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.6174;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2778567 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.958;BRSQ=0.917;LDAF=0.2607;AVGPOST=0.9632;RSQ=0.9324;ERATE=0.0006;THETA=0.0069;AC=563;AN=2184 GT:DS:GL:BD 0.25778389 0
1 2778585 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.745;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4663;ERATE=0.0006;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2778684 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.964;LDAF=0.0096;AVGPOST=0.9992;RSQ=0.9585;ERATE=0.0005;THETA=0.0007;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2778704 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8519;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2778731 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.548;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.6060;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2778766 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.952;LDAF=0.6157;AVGPOST=0.9759;RSQ=0.9606;ERATE=0.0024;THETA=0.0007;AC=1348;AN=2184 GT:DS:GL:BD 0.61721611 1
1 2778841 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.674;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.5437;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2778856 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6136;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2778892 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.983;LDAF=0.6989;AVGPOST=0.9885;RSQ=0.9804;ERATE=0.0006;THETA=0.0038;AC=1531;AN=2184 GT:DS:GL:BD 0.70100731 1
1 2778997 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8340;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2779043 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.987;LDAF=0.6989;AVGPOST=0.9921;RSQ=0.9854;ERATE=0.0005;THETA=0.0007;AC=1527;AN=2184 GT:DS:GL:BD 0.69917583 1
1 2779119 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0025;AVGPOST=0.9985;RSQ=0.7422;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2779159 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9996;AVGPOST=0.9992;RSQ=0.0493;ERATE=0.0005;THETA=0.0008;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 2779250 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.798;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8306;ERATE=0.0005;THETA=0.0041;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2779397 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.848;LDAF=0.0622;AVGPOST=0.9829;RSQ=0.8921;ERATE=0.0005;THETA=0.0031;AC=129;AN=2184 GT:DS:GL:BD 0.05906593 0
1 2779435 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.774;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.5922;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2779481 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.884;LDAF=0.0295;AVGPOST=0.9894;RSQ=0.8648;ERATE=0.0019;THETA=0.0042;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 2779501 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.740;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.5287;ERATE=0.0005;THETA=0.0072;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2779544 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.716;LDAF=0.0023;AVGPOST=0.9977;RSQ=0.5676;ERATE=0.0005;THETA=0.0035;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2779577 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.671;LDAF=0.0058;AVGPOST=0.9943;RSQ=0.6565;ERATE=0.0008;THETA=0.0048;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2779624 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0171;AVGPOST=0.9965;RSQ=0.9194;ERATE=0.0005;THETA=0.0071;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 2779814 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.784;BRSQ=0.460;LDAF=0.5502;AVGPOST=0.7868;RSQ=0.4774;ERATE=0.0624;THETA=0.0009;AC=1232;AN=2184 GT:DS:GL:BD 0.56410259 1
1 2779819 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.776;BRSQ=0.432;LDAF=0.3673;AVGPOST=0.7638;RSQ=0.4291;ERATE=0.0535;THETA=0.0050;AC=699;AN=2184 GT:DS:GL:BD 0.32005495 0
1 2779892 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.910;BRSQ=0.855;LDAF=0.5678;AVGPOST=0.8726;RSQ=0.8209;ERATE=0.0102;THETA=0.0069;AC=1254;AN=2184 GT:DS:GL:BD 0.57417583 1
1 2779923 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.871;LDAF=0.0138;AVGPOST=0.9921;RSQ=0.7926;ERATE=0.0010;THETA=0.0049;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 2779945 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.921;LDAF=0.9688;AVGPOST=0.9915;RSQ=0.8898;ERATE=0.0009;THETA=0.0105;AC=2122;AN=2184 GT:DS:GL:BD 0.97161174 1
1 2780036 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.530;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.4129;ERATE=0.0004;THETA=0.0061;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2780157 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0155;AVGPOST=0.9981;RSQ=0.9545;ERATE=0.0004;THETA=0.0006;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 2780228 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2780263 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0148;AVGPOST=0.9991;RSQ=0.9725;ERATE=0.0004;THETA=0.0120;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 2780331 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.803;LDAF=0.0058;AVGPOST=0.9981;RSQ=0.8601;ERATE=0.0004;THETA=0.0056;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2780506 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4989;ERATE=0.0005;THETA=0.0116;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2780604 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.331;LDAF=0.0064;AVGPOST=0.9900;RSQ=0.3402;ERATE=0.0011;THETA=0.0051;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2780855 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0021;AVGPOST=0.9980;RSQ=0.6042;ERATE=0.0004;THETA=0.0109;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2780878 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.854;LDAF=0.0045;AVGPOST=0.9975;RSQ=0.7786;ERATE=0.0008;THETA=0.0060;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2780902 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.896;LDAF=0.0179;AVGPOST=0.9960;RSQ=0.9113;ERATE=0.0004;THETA=0.0014;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 2780970 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0078;AVGPOST=0.9961;RSQ=0.8339;ERATE=0.0005;THETA=0.0119;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2780987 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.634;LDAF=0.0048;AVGPOST=0.9969;RSQ=0.7180;ERATE=0.0007;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2780993 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.935;BRSQ=0.748;LDAF=0.1149;AVGPOST=0.9457;RSQ=0.8118;ERATE=0.0009;THETA=0.0007;AC=230;AN=2184 GT:DS:GL:BD 0.10531136 0
1 2780995 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.879;BRSQ=0.769;LDAF=0.2822;AVGPOST=0.9019;RSQ=0.8337;ERATE=0.0006;THETA=0.0006;AC=586;AN=2184 GT:DS:GL:BD 0.26831502 0
1 2780996 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.879;BRSQ=0.769;LDAF=0.2783;AVGPOST=0.8997;RSQ=0.8297;ERATE=0.0009;THETA=0.0102;AC=571;AN=2184 GT:DS:GL:BD 0.26144689 0
1 2781008 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.886;LDAF=0.0125;AVGPOST=0.9947;RSQ=0.8366;ERATE=0.0012;THETA=0.0011;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 2781267 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.806;LDAF=0.0157;AVGPOST=0.9906;RSQ=0.7671;ERATE=0.0007;THETA=0.0008;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 2781344 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.679;LDAF=0.0043;AVGPOST=0.9981;RSQ=0.8251;ERATE=0.0006;THETA=0.0077;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2781390 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0080;AVGPOST=0.9987;RSQ=0.9357;ERATE=0.0004;THETA=0.0051;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2781412 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0027;AVGPOST=0.9963;RSQ=0.4849;ERATE=0.0006;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2781543 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.945;LDAF=0.0310;AVGPOST=0.9936;RSQ=0.9211;ERATE=0.0005;THETA=0.0103;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 2781577 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0067;AVGPOST=0.9974;RSQ=0.8251;ERATE=0.0009;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2782025 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0075;AVGPOST=0.9993;RSQ=0.9570;ERATE=0.0004;THETA=0.0020;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2782027 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7085;ERATE=0.0004;THETA=0.0036;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2782114 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0216;AVGPOST=0.9968;RSQ=0.9543;ERATE=0.0003;THETA=0.0013;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 2782178 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5189;ERATE=0.0004;THETA=0.0052;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2782210 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.785;LDAF=0.0262;AVGPOST=0.9881;RSQ=0.8254;ERATE=0.0021;THETA=0.0012;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 2782268 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0238;AVGPOST=0.9980;RSQ=0.9649;ERATE=0.0006;THETA=0.0030;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 2782285 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.557;LDAF=0.0061;AVGPOST=0.9939;RSQ=0.5783;ERATE=0.0011;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2782592 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0072;AVGPOST=0.9969;RSQ=0.8261;ERATE=0.0005;THETA=0.0068;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2782593 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.994;LDAF=0.3636;AVGPOST=0.9932;RSQ=0.9887;ERATE=0.0005;THETA=0.0013;AC=791;AN=2184 GT:DS:GL:BD 0.36217949 0
1 2782699 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0051;AVGPOST=0.9983;RSQ=0.8569;ERATE=0.0004;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2782743 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.963;LDAF=0.9669;AVGPOST=0.9938;RSQ=0.9266;ERATE=0.0008;THETA=0.0006;AC=2114;AN=2184 GT:DS:GL:BD 0.96794873 1
1 2782794 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0034;AVGPOST=0.9976;RSQ=0.7339;ERATE=0.0005;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2782798 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.724;LDAF=0.0030;AVGPOST=0.9976;RSQ=0.6387;ERATE=0.0006;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2782812 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.714;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.3941;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2782990 . C CA 70 PASS INDEL;BAVGPOST=0.999;BRSQ=0.636;LDAF=0.0028;AVGPOST=0.9963;RSQ=0.4899;ERATE=0.0006;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2783040 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.9879;AVGPOST=0.9979;RSQ=0.9210;ERATE=0.0006;THETA=0.0028;AC=2159;AN=2184 GT:DS:GL:BD 0.98855311 1
1 2783064 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.6040;AVGPOST=0.9879;RSQ=0.9814;ERATE=0.0014;THETA=0.0006;AC=1323;AN=2184 GT:DS:GL:BD 0.60576922 1
1 2783309 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4985;AVGPOST=0.9952;RSQ=0.9917;ERATE=0.0007;THETA=0.0003;AC=1092;AN=2184 GT:DS:GL:BD 0.50000000 0
1 2783327 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0037;AVGPOST=0.9990;RSQ=0.8839;ERATE=0.0005;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2783337 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.712;LDAF=0.0010;AVGPOST=0.9984;RSQ=0.3327;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2783431 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4989;AVGPOST=0.9949;RSQ=0.9913;ERATE=0.0010;THETA=0.0004;AC=1092;AN=2184 GT:DS:GL:BD 0.50000000 0
1 2783432 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0078;AVGPOST=0.9988;RSQ=0.9305;ERATE=0.0004;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2783561 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0031;AVGPOST=0.9984;RSQ=0.8545;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2783627 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.848;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.8935;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2783650 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4999;AVGPOST=0.9969;RSQ=0.9947;ERATE=0.0006;THETA=0.0007;AC=1092;AN=2184 GT:DS:GL:BD 0.50000000 0
1 2783681 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.7698;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2783815 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3625;AVGPOST=0.9969;RSQ=0.9946;ERATE=0.0007;THETA=0.0007;AC=791;AN=2184 GT:DS:GL:BD 0.36217949 0
1 2783922 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6313;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2783946 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9505;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2784092 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4997;AVGPOST=0.9966;RSQ=0.9943;ERATE=0.0005;THETA=0.0014;AC=1091;AN=2184 GT:DS:GL:BD 0.49954212 0
1 2784225 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.768;LDAF=0.0033;AVGPOST=0.9971;RSQ=0.6188;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2784239 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.691;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5272;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2784312 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9568;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2784352 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7762;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2784616 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5010;AVGPOST=0.9920;RSQ=0.9865;ERATE=0.0013;THETA=0.0007;AC=1093;AN=2184 GT:DS:GL:BD 0.50045788 1
1 2784666 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.678;LDAF=0.0024;AVGPOST=0.9978;RSQ=0.6117;ERATE=0.0006;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2784670 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.799;LDAF=0.0125;AVGPOST=0.9961;RSQ=0.8739;ERATE=0.0005;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 2784810 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.989;LDAF=0.0886;AVGPOST=0.9917;RSQ=0.9653;ERATE=0.0009;THETA=0.0008;AC=188;AN=2184 GT:DS:GL:BD 0.08608059 0
1 2784907 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0057;AVGPOST=0.9939;RSQ=0.5779;ERATE=0.0005;THETA=0.0016;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2785115 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.671;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.3357;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2785292 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.754;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.5517;ERATE=0.0006;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2785382 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.5023;AVGPOST=0.9912;RSQ=0.9869;ERATE=0.0011;THETA=0.0005;AC=1094;AN=2184 GT:DS:GL:BD 0.50091577 1
1 2785383 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0084;AVGPOST=0.9962;RSQ=0.8610;ERATE=0.0005;THETA=0.0015;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2785426 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.665;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.5826;ERATE=0.0006;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2785497 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0114;AVGPOST=0.9941;RSQ=0.7971;ERATE=0.0009;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 2785511 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.729;LDAF=0.0050;AVGPOST=0.9955;RSQ=0.6591;ERATE=0.0007;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2785517 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.985;LDAF=0.4965;AVGPOST=0.9935;RSQ=0.9893;ERATE=0.0010;THETA=0.0002;AC=1086;AN=2184 GT:DS:GL:BD 0.49725273 0
1 2785560 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.783;LDAF=0.0044;AVGPOST=0.9984;RSQ=0.8435;ERATE=0.0005;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2785671 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.0790;AVGPOST=0.9965;RSQ=0.9839;ERATE=0.0006;THETA=0.0006;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 2785829 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0082;AVGPOST=0.9991;RSQ=0.9541;ERATE=0.0005;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2785882 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.744;LDAF=0.0017;AVGPOST=0.9979;RSQ=0.5324;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2785901 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.7994;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2785950 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.608;LDAF=0.0037;AVGPOST=0.9958;RSQ=0.5896;ERATE=0.0005;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2786145 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.4960;AVGPOST=0.9971;RSQ=0.9949;ERATE=0.0005;THETA=0.0008;AC=1084;AN=2184 GT:DS:GL:BD 0.49633700 0
1 2786266 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.752;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4454;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2786332 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.698;LDAF=0.0027;AVGPOST=0.9972;RSQ=0.5366;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2786399 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0160;AVGPOST=0.9991;RSQ=0.9740;ERATE=0.0004;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 2786411 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.730;LDAF=0.0024;AVGPOST=0.9978;RSQ=0.5742;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2786462 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0127;AVGPOST=0.9989;RSQ=0.9586;ERATE=0.0005;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 2786520 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.501;LDAF=0.0021;AVGPOST=0.9976;RSQ=0.5002;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2786553 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.704;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.3541;ERATE=0.0006;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2786615 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5030;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2786626 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.900;LDAF=0.0207;AVGPOST=0.9950;RSQ=0.9033;ERATE=0.0004;THETA=0.0004;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 2786670 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0237;AVGPOST=0.9992;RSQ=0.9866;ERATE=0.0004;THETA=0.0007;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 2786676 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.942;LDAF=0.0090;AVGPOST=0.9984;RSQ=0.9148;ERATE=0.0004;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2786694 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.4930;AVGPOST=0.9977;RSQ=0.9961;ERATE=0.0005;THETA=0.0005;AC=1077;AN=2184 GT:DS:GL:BD 0.49313188 0
1 2786747 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.823;LDAF=0.0117;AVGPOST=0.9960;RSQ=0.8572;ERATE=0.0007;THETA=0.0037;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 2786788 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0013;AVGPOST=0.9981;RSQ=0.3589;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2786849 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.9072;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2786850 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6549;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2787015 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.836;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6162;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2787093 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4871;AVGPOST=0.9963;RSQ=0.9938;ERATE=0.0005;THETA=0.0029;AC=1063;AN=2184 GT:DS:GL:BD 0.48672161 0
1 2787119 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6145;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2787143 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.877;LDAF=0.0073;AVGPOST=0.9970;RSQ=0.8401;ERATE=0.0005;THETA=0.0009;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2787151 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0050;AVGPOST=0.9995;RSQ=0.9591;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2787153 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.8872;AVGPOST=0.9945;RSQ=0.9813;ERATE=0.0012;THETA=0.0005;AC=1939;AN=2184 GT:DS:GL:BD 0.88782054 1
1 2787239 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4373;ERATE=0.0006;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2787262 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.498;LDAF=0.0025;AVGPOST=0.9963;RSQ=0.4691;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2787286 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.774;LDAF=0.0028;AVGPOST=0.9978;RSQ=0.6950;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2787399 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0039;AVGPOST=0.9979;RSQ=0.7952;ERATE=0.0005;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2787550 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.0868;AVGPOST=0.9974;RSQ=0.9874;ERATE=0.0007;THETA=0.0007;AC=189;AN=2184 GT:DS:GL:BD 0.08653846 0
1 2787703 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.5523;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2787707 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9771;AVGPOST=0.9998;RSQ=0.9958;ERATE=0.0003;THETA=0.0009;AC=2134;AN=2184 GT:DS:GL:BD 0.97710621 1
1 2787781 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4613;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2787819 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9286;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2787856 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7702;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2787874 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6963;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2787896 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0237;AVGPOST=0.9993;RSQ=0.9884;ERATE=0.0003;THETA=0.0006;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 2788029 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.678;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6434;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2788060 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8710;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2788089 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7526;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2788427 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0137;AVGPOST=0.9986;RSQ=0.9570;ERATE=0.0003;THETA=0.0013;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2788637 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0040;AVGPOST=0.9985;RSQ=0.8441;ERATE=0.0004;THETA=0.0015;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2788661 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.940;LDAF=0.0288;AVGPOST=0.9926;RSQ=0.9132;ERATE=0.0004;THETA=0.0005;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 2788708 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0773;AVGPOST=0.9977;RSQ=0.9895;ERATE=0.0006;THETA=0.0005;AC=167;AN=2184 GT:DS:GL:BD 0.07646520 0
1 2788713 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.959;LDAF=0.3423;AVGPOST=0.9856;RSQ=0.9781;ERATE=0.0008;THETA=0.0007;AC=748;AN=2184 GT:DS:GL:BD 0.34249085 0
1 2788716 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.936;LDAF=0.0142;AVGPOST=0.9951;RSQ=0.8696;ERATE=0.0008;THETA=0.0031;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 2788825 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.868;LDAF=0.0038;AVGPOST=0.9988;RSQ=0.8561;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2789105 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0047;AVGPOST=0.9992;RSQ=0.9237;ERATE=0.0004;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2789108 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5764;AVGPOST=0.9959;RSQ=0.9935;ERATE=0.0003;THETA=0.0010;AC=1260;AN=2184 GT:DS:GL:BD 0.57692307 1
1 2789175 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.846;LDAF=0.9869;AVGPOST=0.9952;RSQ=0.8482;ERATE=0.0010;THETA=0.0008;AC=2159;AN=2184 GT:DS:GL:BD 0.98855311 1
1 2789220 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0076;AVGPOST=0.9995;RSQ=0.9651;ERATE=0.0004;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2789270 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4995;AVGPOST=0.9947;RSQ=0.9920;ERATE=0.0007;THETA=0.0019;AC=1093;AN=2184 GT:DS:GL:BD 0.50045788 1
1 2789272 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7149;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2789307 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0089;AVGPOST=0.9979;RSQ=0.9131;ERATE=0.0004;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 2789434 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.500;LDAF=0.0035;AVGPOST=0.9949;RSQ=0.4272;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2789445 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.656;LDAF=0.0029;AVGPOST=0.9965;RSQ=0.4578;ERATE=0.0010;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2789457 rs59696187 T TTTC 81966 PASS INDEL;BAVGPOST=0.997;BRSQ=0.964;LDAF=0.9716;AVGPOST=0.9930;RSQ=0.8978;ERATE=0.0013;THETA=0.0013;AC=2128;AN=2184 GT:DS:GL:BD 0.97435898 1
1 2789503 . CTT C 1237 PASS INDEL;BAVGPOST=0.776;BRSQ=0.519;LDAF=0.3213;AVGPOST=0.7665;RSQ=0.5447;ERATE=0.0338;THETA=0.0005;AC=648;AN=2184 GT:DS:GL:BD 0.29670331 0
1 2789559 . CTCTT C 29288 PASS INDEL;BAVGPOST=0.804;BRSQ=0.427;LDAF=0.7540;AVGPOST=0.7737;RSQ=0.4685;ERATE=0.0408;THETA=0.0006;AC=1805;AN=2184 GT:DS:GL:BD 0.82646519 1
1 2789572 . TC T 7229 PASS INDEL;BAVGPOST=0.990;BRSQ=0.740;LDAF=0.9822;AVGPOST=0.9911;RSQ=0.8115;ERATE=0.0008;THETA=0.0005;AC=2151;AN=2184 GT:DS:GL:BD 0.98489010 1
1 2789619 rs112405875 TTTTCTTCTCTTTC T 85632 PASS INDEL;BAVGPOST=0.975;BRSQ=0.920;LDAF=0.8254;AVGPOST=0.9289;RSQ=0.8367;ERATE=0.0095;THETA=0.0002;AC=1851;AN=2184 GT:DS:GL:BD 0.84752744 1
1 2789752 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0030;AVGPOST=0.9990;RSQ=0.8514;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2789798 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2789831 . GTC G 34 PASS INDEL;BAVGPOST=0.994;BRSQ=0.526;LDAF=0.0156;AVGPOST=0.9760;RSQ=0.3716;ERATE=0.0045;THETA=0.0019;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2789896 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7189;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2789906 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.8516;AVGPOST=0.9973;RSQ=0.9928;ERATE=0.0006;THETA=0.0036;AC=1860;AN=2184 GT:DS:GL:BD 0.85164833 1
1 2789972 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3636;AVGPOST=0.9906;RSQ=0.9868;ERATE=0.0011;THETA=0.0010;AC=788;AN=2184 GT:DS:GL:BD 0.36080587 0
1 2790093 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.4895;AVGPOST=0.9921;RSQ=0.9876;ERATE=0.0008;THETA=0.0022;AC=1069;AN=2184 GT:DS:GL:BD 0.48946887 0
1 2790127 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.483;LDAF=0.0041;AVGPOST=0.9951;RSQ=0.5502;ERATE=0.0007;THETA=0.0013;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2790245 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0023;AVGPOST=0.9974;RSQ=0.5670;ERATE=0.0004;THETA=0.0018;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2790373 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.979;LDAF=0.0771;AVGPOST=0.9972;RSQ=0.9876;ERATE=0.0003;THETA=0.0008;AC=167;AN=2184 GT:DS:GL:BD 0.07646520 0
1 2790431 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.721;LDAF=0.0026;AVGPOST=0.9980;RSQ=0.6580;ERATE=0.0004;THETA=0.0049;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2790516 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0005;AVGPOST=0.9994;RSQ=0.4876;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2790517 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5009;ERATE=0.0004;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2790654 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0046;AVGPOST=0.9989;RSQ=0.8924;ERATE=0.0004;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2791032 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.9103;ERATE=0.0003;THETA=0.0039;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2791092 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0058;AVGPOST=0.9982;RSQ=0.8677;ERATE=0.0006;THETA=0.0063;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2791143 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.975;LDAF=0.3917;AVGPOST=0.9769;RSQ=0.9675;ERATE=0.0027;THETA=0.0053;AC=855;AN=2184 GT:DS:GL:BD 0.39148352 0
1 2791189 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0346;AVGPOST=0.9968;RSQ=0.9624;ERATE=0.0008;THETA=0.0111;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 2791319 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.950;LDAF=0.0237;AVGPOST=0.9965;RSQ=0.9395;ERATE=0.0004;THETA=0.0049;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 2791323 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.698;LDAF=0.0016;AVGPOST=0.9974;RSQ=0.3794;ERATE=0.0005;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2791385 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0022;AVGPOST=0.9977;RSQ=0.6239;ERATE=0.0007;THETA=0.0052;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2791416 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.814;LDAF=0.0127;AVGPOST=0.9952;RSQ=0.8416;ERATE=0.0006;THETA=0.0035;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 2791428 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.955;LDAF=0.0093;AVGPOST=0.9990;RSQ=0.9580;ERATE=0.0003;THETA=0.0030;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2791462 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.871;LDAF=0.0170;AVGPOST=0.9925;RSQ=0.8384;ERATE=0.0006;THETA=0.0051;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 2791504 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.476;LDAF=0.0034;AVGPOST=0.9949;RSQ=0.3785;ERATE=0.0010;THETA=0.0153;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2791519 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0040;AVGPOST=0.9984;RSQ=0.8617;ERATE=0.0005;THETA=0.0118;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2791575 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.584;LDAF=0.0059;AVGPOST=0.9952;RSQ=0.6797;ERATE=0.0006;THETA=0.0014;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2791659 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.602;LDAF=0.0043;AVGPOST=0.9926;RSQ=0.2656;ERATE=0.0011;THETA=0.0035;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2791688 . AC A 71 PASS INDEL;BAVGPOST=0.999;BRSQ=0.580;LDAF=0.0025;AVGPOST=0.9958;RSQ=0.3005;ERATE=0.0004;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2791877 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.0264;AVGPOST=0.9983;RSQ=0.9771;ERATE=0.0003;THETA=0.0083;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 2791891 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.962;LDAF=0.4963;AVGPOST=0.9691;RSQ=0.9544;ERATE=0.0045;THETA=0.0028;AC=1076;AN=2184 GT:DS:GL:BD 0.49267399 0
1 2791915 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.680;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5741;ERATE=0.0005;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2791951 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.640;LDAF=0.0038;AVGPOST=0.9953;RSQ=0.5405;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2791953 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.984;LDAF=0.3159;AVGPOST=0.9882;RSQ=0.9819;ERATE=0.0005;THETA=0.0008;AC=693;AN=2184 GT:DS:GL:BD 0.31730768 0
1 2791989 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.691;LDAF=0.0067;AVGPOST=0.9960;RSQ=0.7682;ERATE=0.0006;THETA=0.0012;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2792020 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.821;LDAF=0.0098;AVGPOST=0.9966;RSQ=0.8544;ERATE=0.0009;THETA=0.0021;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 2792033 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.761;LDAF=0.0038;AVGPOST=0.9970;RSQ=0.6965;ERATE=0.0005;THETA=0.0012;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2792035 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5846;ERATE=0.0004;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2792115 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.3149;AVGPOST=0.9918;RSQ=0.9867;ERATE=0.0007;THETA=0.0010;AC=689;AN=2184 GT:DS:GL:BD 0.31547618 0
1 2792166 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.7803;ERATE=0.0004;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2792194 . GTGC G 403 PASS INDEL;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0052;AVGPOST=0.9981;RSQ=0.8502;ERATE=0.0006;THETA=0.0054;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2792280 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9524;ERATE=0.0003;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2792297 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0161;AVGPOST=0.9988;RSQ=0.9707;ERATE=0.0004;THETA=0.0017;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 2792312 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0319;AVGPOST=0.9987;RSQ=0.9823;ERATE=0.0004;THETA=0.0032;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 2792396 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.732;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7310;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2792472 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.810;LDAF=0.0143;AVGPOST=0.9947;RSQ=0.8332;ERATE=0.0006;THETA=0.0007;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 2792496 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.756;LDAF=0.0053;AVGPOST=0.9960;RSQ=0.6986;ERATE=0.0007;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2792577 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0070;AVGPOST=0.9979;RSQ=0.8954;ERATE=0.0006;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2792598 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4017;ERATE=0.0007;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2792637 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.718;LDAF=0.0210;AVGPOST=0.9878;RSQ=0.7598;ERATE=0.0006;THETA=0.0008;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 2792691 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0066;AVGPOST=0.9982;RSQ=0.8926;ERATE=0.0007;THETA=0.0009;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2792722 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0081;AVGPOST=0.9945;RSQ=0.7341;ERATE=0.0007;THETA=0.0012;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 2792741 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.851;LDAF=0.0182;AVGPOST=0.9900;RSQ=0.8008;ERATE=0.0012;THETA=0.0006;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 2792801 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0321;AVGPOST=0.9986;RSQ=0.9814;ERATE=0.0004;THETA=0.0006;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 2792845 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0119;AVGPOST=0.9976;RSQ=0.9095;ERATE=0.0004;THETA=0.0013;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 2792942 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.853;LDAF=0.0100;AVGPOST=0.9970;RSQ=0.8808;ERATE=0.0009;THETA=0.0008;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 2793042 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0332;AVGPOST=0.9983;RSQ=0.9763;ERATE=0.0005;THETA=0.0006;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 2793071 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0038;AVGPOST=0.9981;RSQ=0.8457;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2793159 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0220;AVGPOST=0.9981;RSQ=0.9713;ERATE=0.0004;THETA=0.0003;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 2793180 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5301;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2793220 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5809;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2793232 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.988;LDAF=0.0708;AVGPOST=0.9953;RSQ=0.9768;ERATE=0.0005;THETA=0.0011;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 2793373 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.605;LDAF=0.0022;AVGPOST=0.9991;RSQ=0.8043;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2793410 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0057;AVGPOST=0.9995;RSQ=0.9587;ERATE=0.0004;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2793441 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0024;AVGPOST=0.9995;RSQ=0.9019;ERATE=0.0004;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2793445 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0022;AVGPOST=0.9976;RSQ=0.6146;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2793509 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.917;LDAF=0.0085;AVGPOST=0.9975;RSQ=0.9022;ERATE=0.0004;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2793542 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.736;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.5813;ERATE=0.0003;THETA=0.0017;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2793574 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0033;AVGPOST=0.9996;RSQ=0.9589;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2793725 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0043;AVGPOST=0.9978;RSQ=0.8238;ERATE=0.0007;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2793730 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.763;LDAF=0.0024;AVGPOST=0.9972;RSQ=0.5801;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2793754 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0275;AVGPOST=0.9986;RSQ=0.9815;ERATE=0.0004;THETA=0.0008;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 2793863 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7726;ERATE=0.0010;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2793884 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0022;AVGPOST=0.9982;RSQ=0.6857;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2793928 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.933;LDAF=0.0064;AVGPOST=0.9981;RSQ=0.8895;ERATE=0.0005;THETA=0.0010;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2794114 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0060;AVGPOST=0.9994;RSQ=0.9608;ERATE=0.0004;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2794117 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0322;AVGPOST=0.9986;RSQ=0.9826;ERATE=0.0003;THETA=0.0008;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 2794164 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0160;AVGPOST=0.9988;RSQ=0.9690;ERATE=0.0004;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 2794250 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1318;AVGPOST=0.9979;RSQ=0.9938;ERATE=0.0004;THETA=0.0011;AC=288;AN=2184 GT:DS:GL:BD 0.13186814 0
1 2794253 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.989;LDAF=0.4558;AVGPOST=0.9905;RSQ=0.9862;ERATE=0.0004;THETA=0.0015;AC=991;AN=2184 GT:DS:GL:BD 0.45375457 0
1 2794284 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.593;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6143;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2794302 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.980;LDAF=0.0210;AVGPOST=0.9988;RSQ=0.9774;ERATE=0.0004;THETA=0.0003;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 2794395 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.775;LDAF=0.0049;AVGPOST=0.9960;RSQ=0.6713;ERATE=0.0004;THETA=0.0029;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2794470 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.0843;AVGPOST=0.9987;RSQ=0.9935;ERATE=0.0004;THETA=0.0010;AC=184;AN=2184 GT:DS:GL:BD 0.08424909 0
1 2794501 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0069;AVGPOST=0.9982;RSQ=0.9134;ERATE=0.0004;THETA=0.0013;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2794537 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.990;LDAF=0.4838;AVGPOST=0.9909;RSQ=0.9866;ERATE=0.0004;THETA=0.0005;AC=1059;AN=2184 GT:DS:GL:BD 0.48489010 0
1 2794551 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.992;LDAF=0.3992;AVGPOST=0.9905;RSQ=0.9870;ERATE=0.0005;THETA=0.0005;AC=873;AN=2184 GT:DS:GL:BD 0.39972529 0
1 2794577 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.866;LDAF=0.0104;AVGPOST=0.9956;RSQ=0.8181;ERATE=0.0004;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2794663 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9995;RSQ=0.9671;ERATE=0.0004;THETA=0.0015;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2794870 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0027;AVGPOST=0.9981;RSQ=0.7191;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2794922 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4943;ERATE=0.0005;THETA=0.0034;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2794936 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.873;LDAF=0.0056;AVGPOST=0.9975;RSQ=0.8081;ERATE=0.0003;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2794958 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0320;AVGPOST=0.9981;RSQ=0.9739;ERATE=0.0006;THETA=0.0011;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 2795082 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0112;AVGPOST=0.9980;RSQ=0.9314;ERATE=0.0003;THETA=0.0006;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 2795334 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0055;AVGPOST=0.9957;RSQ=0.6792;ERATE=0.0009;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2795376 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.747;LDAF=0.0027;AVGPOST=0.9970;RSQ=0.5569;ERATE=0.0006;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2795438 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0027;AVGPOST=0.9977;RSQ=0.6740;ERATE=0.0005;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2795497 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.775;LDAF=0.0056;AVGPOST=0.9967;RSQ=0.7390;ERATE=0.0007;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2795537 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.969;LDAF=0.5383;AVGPOST=0.9577;RSQ=0.9356;ERATE=0.0042;THETA=0.0043;AC=1178;AN=2184 GT:DS:GL:BD 0.53937727 1
1 2795616 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0328;AVGPOST=0.9974;RSQ=0.9689;ERATE=0.0007;THETA=0.0024;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 2795658 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0022;AVGPOST=0.9982;RSQ=0.6675;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2795733 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0074;AVGPOST=0.9941;RSQ=0.6883;ERATE=0.0009;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2796001 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.933;LDAF=0.9517;AVGPOST=0.9941;RSQ=0.9532;ERATE=0.0013;THETA=0.0023;AC=2083;AN=2184 GT:DS:GL:BD 0.95375460 1
1 2796145 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.612;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.3553;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2796232 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0026;AVGPOST=0.9977;RSQ=0.6240;ERATE=0.0006;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2796254 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0115;AVGPOST=0.9985;RSQ=0.9445;ERATE=0.0004;THETA=0.0009;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 2796255 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.862;LDAF=0.0058;AVGPOST=0.9966;RSQ=0.7935;ERATE=0.0005;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2796316 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.655;LDAF=0.0025;AVGPOST=0.9978;RSQ=0.6363;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2796332 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0041;AVGPOST=0.9992;RSQ=0.9111;ERATE=0.0003;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2796439 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5968;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2796501 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4280;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2796555 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.9486;AVGPOST=0.9982;RSQ=0.9859;ERATE=0.0004;THETA=0.0008;AC=2072;AN=2184 GT:DS:GL:BD 0.94871795 1
1 2796568 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.813;LDAF=0.0059;AVGPOST=0.9972;RSQ=0.8081;ERATE=0.0004;THETA=0.0023;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2796574 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.740;LDAF=0.0036;AVGPOST=0.9964;RSQ=0.6213;ERATE=0.0003;THETA=0.0020;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2796619 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.974;LDAF=0.9504;AVGPOST=0.9957;RSQ=0.9661;ERATE=0.0009;THETA=0.0029;AC=2077;AN=2184 GT:DS:GL:BD 0.95100731 1
1 2796659 . G GC 50 PASS INDEL;BAVGPOST=0.992;BRSQ=0.433;LDAF=0.0072;AVGPOST=0.9912;RSQ=0.5081;ERATE=0.0009;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2796663 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.941;LDAF=0.0331;AVGPOST=0.9981;RSQ=0.9746;ERATE=0.0006;THETA=0.0012;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 2796730 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.890;LDAF=0.0065;AVGPOST=0.9980;RSQ=0.8845;ERATE=0.0004;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2796854 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0084;AVGPOST=0.9959;RSQ=0.8019;ERATE=0.0006;THETA=0.0012;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 2796915 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0079;AVGPOST=0.9958;RSQ=0.8138;ERATE=0.0007;THETA=0.0010;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 2796932 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.775;LDAF=0.0036;AVGPOST=0.9942;RSQ=0.3606;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2797023 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.600;LDAF=0.0024;AVGPOST=0.9968;RSQ=0.4513;ERATE=0.0008;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2797044 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0031;AVGPOST=0.9984;RSQ=0.7764;ERATE=0.0006;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2797256 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5025;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2797266 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.9482;AVGPOST=0.9977;RSQ=0.9834;ERATE=0.0004;THETA=0.0007;AC=2071;AN=2184 GT:DS:GL:BD 0.94826007 1
1 2797437 . CCTT C 905 PASS INDEL;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0059;AVGPOST=0.9989;RSQ=0.9085;ERATE=0.0004;THETA=0.0023;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2797475 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6252;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2797483 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0062;AVGPOST=0.9995;RSQ=0.9664;ERATE=0.0004;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2797498 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.8029;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2797524 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2797558 rs60079168 T TACACATGTGC 1741 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0060;AVGPOST=0.9995;RSQ=0.9631;ERATE=0.0004;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2797586 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9996;RSQ=0.9719;ERATE=0.0004;THETA=0.0011;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2797593 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0025;AVGPOST=0.9994;RSQ=0.9081;ERATE=0.0004;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2797720 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9804;ERATE=0.0004;THETA=0.0009;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2797846 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.827;LDAF=0.0021;AVGPOST=0.9987;RSQ=0.7273;ERATE=0.0007;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2797856 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5091;AVGPOST=0.9968;RSQ=0.9949;ERATE=0.0007;THETA=0.0006;AC=1112;AN=2184 GT:DS:GL:BD 0.50915754 1
1 2797994 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.686;LDAF=0.0086;AVGPOST=0.9965;RSQ=0.8182;ERATE=0.0007;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2798205 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5035;AVGPOST=0.9951;RSQ=0.9917;ERATE=0.0007;THETA=0.0003;AC=1099;AN=2184 GT:DS:GL:BD 0.50320512 1
1 2798276 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.5038;AVGPOST=0.9947;RSQ=0.9913;ERATE=0.0009;THETA=0.0005;AC=1099;AN=2184 GT:DS:GL:BD 0.50320512 1
1 2798335 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.5116;AVGPOST=0.9927;RSQ=0.9888;ERATE=0.0007;THETA=0.0006;AC=1117;AN=2184 GT:DS:GL:BD 0.51144689 1
1 2798439 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0322;AVGPOST=0.9985;RSQ=0.9813;ERATE=0.0004;THETA=0.0006;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 2798446 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0071;AVGPOST=0.9979;RSQ=0.8981;ERATE=0.0005;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 2798447 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7349;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2798457 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4944;AVGPOST=0.9944;RSQ=0.9917;ERATE=0.0008;THETA=0.0005;AC=1077;AN=2184 GT:DS:GL:BD 0.49313188 0
1 2798460 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.761;LDAF=0.0027;AVGPOST=0.9975;RSQ=0.6334;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2798483 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.945;LDAF=0.0120;AVGPOST=0.9984;RSQ=0.9454;ERATE=0.0006;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 2798554 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.782;LDAF=0.0016;AVGPOST=0.9982;RSQ=0.5369;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2798572 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0066;AVGPOST=0.9986;RSQ=0.9300;ERATE=0.0004;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2798573 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.694;LDAF=0.0027;AVGPOST=0.9960;RSQ=0.3628;ERATE=0.0015;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2798576 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.781;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.5742;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2798604 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.919;LDAF=0.0220;AVGPOST=0.9964;RSQ=0.9405;ERATE=0.0004;THETA=0.0005;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 2798712 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5427;AVGPOST=0.9966;RSQ=0.9946;ERATE=0.0005;THETA=0.0009;AC=1183;AN=2184 GT:DS:GL:BD 0.54166669 1
1 2798727 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.725;LDAF=0.0078;AVGPOST=0.9964;RSQ=0.7966;ERATE=0.0009;THETA=0.0010;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 2798728 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.752;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.5771;ERATE=0.0006;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2798742 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.724;LDAF=0.0066;AVGPOST=0.9960;RSQ=0.7324;ERATE=0.0008;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2798880 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0318;AVGPOST=0.9989;RSQ=0.9853;ERATE=0.0005;THETA=0.0005;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 2798960 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.624;LDAF=0.0020;AVGPOST=0.9986;RSQ=0.7490;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2798986 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.895;LDAF=0.0053;AVGPOST=0.9983;RSQ=0.8637;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2799047 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5115;AVGPOST=0.9909;RSQ=0.9854;ERATE=0.0017;THETA=0.0006;AC=1119;AN=2184 GT:DS:GL:BD 0.51236266 1
1 2799088 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.656;LDAF=0.0024;AVGPOST=0.9970;RSQ=0.4638;ERATE=0.0008;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2799090 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.933;LDAF=0.0282;AVGPOST=0.9931;RSQ=0.9171;ERATE=0.0004;THETA=0.0004;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 2799179 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.8830;AVGPOST=0.9981;RSQ=0.9940;ERATE=0.0004;THETA=0.0005;AC=1929;AN=2184 GT:DS:GL:BD 0.88324177 1
1 2799325 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4666;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2799407 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0084;AVGPOST=0.9987;RSQ=0.9388;ERATE=0.0004;THETA=0.0010;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2799432 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0046;AVGPOST=0.9980;RSQ=0.8676;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2799461 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.876;LDAF=0.9864;AVGPOST=0.9977;RSQ=0.9277;ERATE=0.0005;THETA=0.0004;AC=2154;AN=2184 GT:DS:GL:BD 0.98626375 1
1 2799480 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3243;AVGPOST=0.9895;RSQ=0.9827;ERATE=0.0009;THETA=0.0005;AC=708;AN=2184 GT:DS:GL:BD 0.32417583 0
1 2799539 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.329;LDAF=0.0038;AVGPOST=0.9954;RSQ=0.4937;ERATE=0.0009;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2799548 . G GGTGA 98 PASS INDEL;BAVGPOST=0.999;BRSQ=0.603;LDAF=0.0043;AVGPOST=0.9951;RSQ=0.5403;ERATE=0.0007;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2799565 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.508;LDAF=0.0035;AVGPOST=0.9950;RSQ=0.4285;ERATE=0.0009;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2799629 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0066;AVGPOST=0.9976;RSQ=0.8403;ERATE=0.0005;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2799638 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.509;LDAF=0.0060;AVGPOST=0.9934;RSQ=0.5651;ERATE=0.0010;THETA=0.0009;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2799641 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.627;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.3895;ERATE=0.0006;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2799662 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.630;LDAF=0.0033;AVGPOST=0.9972;RSQ=0.6688;ERATE=0.0004;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2799763 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.967;LDAF=0.9472;AVGPOST=0.9974;RSQ=0.9829;ERATE=0.0005;THETA=0.0007;AC=2071;AN=2184 GT:DS:GL:BD 0.94826007 1
1 2799777 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.685;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.5762;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2799827 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8085;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2799939 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.753;LDAF=0.0037;AVGPOST=0.9945;RSQ=0.3999;ERATE=0.0009;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2799962 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.764;LDAF=0.0055;AVGPOST=0.9970;RSQ=0.7985;ERATE=0.0008;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2799989 . A AG 5550 PASS INDEL;BAVGPOST=0.992;BRSQ=0.952;LDAF=0.0835;AVGPOST=0.9903;RSQ=0.9527;ERATE=0.0009;THETA=0.0006;AC=176;AN=2184 GT:DS:GL:BD 0.08058608 0
1 2800020 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9981;RSQ=0.8906;ERATE=0.0005;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2800053 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0053;AVGPOST=0.9941;RSQ=0.5663;ERATE=0.0007;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2800070 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.3931;ERATE=0.0008;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2800086 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.810;LDAF=0.0163;AVGPOST=0.9939;RSQ=0.8550;ERATE=0.0004;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 2800093 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.642;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.3734;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2800100 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.567;LDAF=0.0018;AVGPOST=0.9972;RSQ=0.3973;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2800106 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.811;LDAF=0.0163;AVGPOST=0.9941;RSQ=0.8597;ERATE=0.0005;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 2800109 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0149;AVGPOST=0.9971;RSQ=0.9244;ERATE=0.0004;THETA=0.0006;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 2800118 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.9465;AVGPOST=0.9971;RSQ=0.9809;ERATE=0.0007;THETA=0.0004;AC=2068;AN=2184 GT:DS:GL:BD 0.94688642 1
1 2800126 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0069;AVGPOST=0.9977;RSQ=0.8645;ERATE=0.0007;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2800354 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.989;LDAF=0.4915;AVGPOST=0.9866;RSQ=0.9776;ERATE=0.0009;THETA=0.0012;AC=1074;AN=2184 GT:DS:GL:BD 0.49175823 0
1 2800450 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0059;AVGPOST=0.9990;RSQ=0.9221;ERATE=0.0004;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2800554 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4719;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2800573 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.861;LDAF=0.0141;AVGPOST=0.9959;RSQ=0.8813;ERATE=0.0004;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 2800643 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.724;LDAF=0.0023;AVGPOST=0.9964;RSQ=0.3095;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2800644 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.519;LDAF=0.0296;AVGPOST=0.9644;RSQ=0.5323;ERATE=0.0102;THETA=0.0006;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 2800664 . AGT A 26 PASS INDEL;BAVGPOST=0.996;BRSQ=0.535;LDAF=0.0059;AVGPOST=0.9906;RSQ=0.4039;ERATE=0.0016;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2800685 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.580;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.6992;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2800697 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.870;LDAF=0.0035;AVGPOST=0.9987;RSQ=0.8410;ERATE=0.0005;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2800731 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.847;LDAF=0.0103;AVGPOST=0.9952;RSQ=0.8353;ERATE=0.0005;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 2800736 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.949;LDAF=0.0121;AVGPOST=0.9980;RSQ=0.9324;ERATE=0.0004;THETA=0.0008;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 2800754 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.9469;AVGPOST=0.9986;RSQ=0.9898;ERATE=0.0004;THETA=0.0005;AC=2068;AN=2184 GT:DS:GL:BD 0.94688642 1
1 2800772 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0058;AVGPOST=0.9994;RSQ=0.9530;ERATE=0.0003;THETA=0.0010;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2800790 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.896;LDAF=0.0065;AVGPOST=0.9981;RSQ=0.8726;ERATE=0.0006;THETA=0.0011;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2800809 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5470;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2800923 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2800947 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0032;AVGPOST=0.9979;RSQ=0.7292;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2801015 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.647;LDAF=0.0046;AVGPOST=0.9963;RSQ=0.6657;ERATE=0.0008;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2801086 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.611;LDAF=0.0037;AVGPOST=0.9974;RSQ=0.6975;ERATE=0.0006;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2801107 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0084;AVGPOST=0.9953;RSQ=0.7817;ERATE=0.0009;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 2801151 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0074;AVGPOST=0.9989;RSQ=0.9463;ERATE=0.0004;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2801187 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6313;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2801379 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4604;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2801396 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.955;LDAF=0.0345;AVGPOST=0.9938;RSQ=0.9332;ERATE=0.0007;THETA=0.0003;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 2801397 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6584;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2801459 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0688;AVGPOST=0.9973;RSQ=0.9827;ERATE=0.0005;THETA=0.0005;AC=148;AN=2184 GT:DS:GL:BD 0.06776557 0
1 2801472 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.769;LDAF=0.0044;AVGPOST=0.9975;RSQ=0.7921;ERATE=0.0004;THETA=0.0029;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2801514 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.767;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6244;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2801597 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7052;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2801601 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.729;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7590;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2801614 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0059;AVGPOST=0.9997;RSQ=0.9669;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2801684 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0065;AVGPOST=0.9985;RSQ=0.9220;ERATE=0.0004;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2801702 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0059;AVGPOST=0.9990;RSQ=0.9430;ERATE=0.0004;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2801750 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0061;AVGPOST=0.9988;RSQ=0.9122;ERATE=0.0005;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2801758 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0333;AVGPOST=0.9973;RSQ=0.9673;ERATE=0.0004;THETA=0.0010;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 2801767 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0113;AVGPOST=0.9992;RSQ=0.9715;ERATE=0.0004;THETA=0.0009;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 2801768 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0079;AVGPOST=0.9979;RSQ=0.8970;ERATE=0.0005;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2801796 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0060;AVGPOST=0.9990;RSQ=0.9227;ERATE=0.0004;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2801828 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.8979;AVGPOST=0.9979;RSQ=0.9925;ERATE=0.0004;THETA=0.0009;AC=1962;AN=2184 GT:DS:GL:BD 0.89835167 1
1 2801976 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0801;AVGPOST=0.9974;RSQ=0.9877;ERATE=0.0003;THETA=0.0005;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 2801985 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0797;AVGPOST=0.9978;RSQ=0.9886;ERATE=0.0003;THETA=0.0006;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 2801991 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0070;AVGPOST=0.9993;RSQ=0.9569;ERATE=0.0004;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 2802010 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9998;RSQ=0.9874;ERATE=0.0004;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2802035 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.9591;AVGPOST=0.9987;RSQ=0.9879;ERATE=0.0005;THETA=0.0007;AC=2096;AN=2184 GT:DS:GL:BD 0.95970696 1
1 2802052 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3224;AVGPOST=0.9934;RSQ=0.9900;ERATE=0.0004;THETA=0.0003;AC=705;AN=2184 GT:DS:GL:BD 0.32280219 0
1 2802057 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3269;AVGPOST=0.9927;RSQ=0.9879;ERATE=0.0009;THETA=0.0005;AC=715;AN=2184 GT:DS:GL:BD 0.32738096 0
1 2802086 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0025;AVGPOST=0.9992;RSQ=0.8604;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2802168 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9904;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2802192 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6377;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2802212 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.8876;AVGPOST=0.9967;RSQ=0.9903;ERATE=0.0004;THETA=0.0007;AC=1939;AN=2184 GT:DS:GL:BD 0.88782054 1
1 2802213 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0065;AVGPOST=0.9996;RSQ=0.9767;ERATE=0.0004;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2802232 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8333;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2802233 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0106;AVGPOST=0.9994;RSQ=0.9741;ERATE=0.0003;THETA=0.0012;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 2802278 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0117;AVGPOST=0.9990;RSQ=0.9655;ERATE=0.0004;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 2802345 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2802348 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3238;AVGPOST=0.9941;RSQ=0.9906;ERATE=0.0006;THETA=0.0048;AC=707;AN=2184 GT:DS:GL:BD 0.32371795 0
1 2802389 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0738;AVGPOST=0.9976;RSQ=0.9865;ERATE=0.0004;THETA=0.0007;AC=161;AN=2184 GT:DS:GL:BD 0.07371795 0
1 2802411 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.7444;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2802487 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0059;AVGPOST=0.9999;RSQ=0.9904;ERATE=0.0003;THETA=0.0046;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2802519 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0110;AVGPOST=0.9974;RSQ=0.9150;ERATE=0.0005;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 2802520 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0004;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2802534 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9695;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2802562 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.916;LDAF=0.0269;AVGPOST=0.9962;RSQ=0.9413;ERATE=0.0004;THETA=0.0032;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 2802591 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2802610 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9996;RSQ=0.9751;ERATE=0.0004;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2802666 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0010;AVGPOST=0.9985;RSQ=0.4769;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2802668 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4318;ERATE=0.0004;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2802816 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.752;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.4696;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2802848 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0085;AVGPOST=0.9994;RSQ=0.9696;ERATE=0.0004;THETA=0.0105;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2802872 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0063;AVGPOST=0.9992;RSQ=0.9498;ERATE=0.0005;THETA=0.0009;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2802884 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.941;LDAF=0.0081;AVGPOST=0.9974;RSQ=0.8662;ERATE=0.0004;THETA=0.0009;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2803037 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7323;ERATE=0.0004;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2803080 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.723;LDAF=0.0080;AVGPOST=0.9940;RSQ=0.7686;ERATE=0.0005;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2803109 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.772;LDAF=0.0037;AVGPOST=0.9980;RSQ=0.7727;ERATE=0.0006;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2803180 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.889;LDAF=0.0325;AVGPOST=0.9843;RSQ=0.8216;ERATE=0.0038;THETA=0.0059;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 2803259 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.951;LDAF=0.0618;AVGPOST=0.9920;RSQ=0.9544;ERATE=0.0008;THETA=0.0009;AC=136;AN=2184 GT:DS:GL:BD 0.06227106 0
1 2803363 . A AGCCTCCCAGTGCCCTG 4574 PASS INDEL;BAVGPOST=0.996;BRSQ=0.952;LDAF=0.0348;AVGPOST=0.9860;RSQ=0.8381;ERATE=0.0010;THETA=0.0032;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 2803373 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.882;LDAF=0.0316;AVGPOST=0.9932;RSQ=0.9119;ERATE=0.0007;THETA=0.0007;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 2803389 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.933;LDAF=0.0246;AVGPOST=0.9916;RSQ=0.8848;ERATE=0.0005;THETA=0.0008;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 2803525 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.682;LDAF=0.0112;AVGPOST=0.9944;RSQ=0.8124;ERATE=0.0006;THETA=0.0026;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 2803547 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.960;LDAF=0.9312;AVGPOST=0.9935;RSQ=0.9659;ERATE=0.0006;THETA=0.0013;AC=2036;AN=2184 GT:DS:GL:BD 0.93223441 1
1 2803576 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6786;ERATE=0.0004;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2803618 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5188;ERATE=0.0004;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2803624 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2803803 . CT C 220 PASS INDEL;BAVGPOST=0.997;BRSQ=0.597;LDAF=0.0057;AVGPOST=0.9956;RSQ=0.6824;ERATE=0.0007;THETA=0.0011;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2803806 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.950;LDAF=0.4226;AVGPOST=0.9336;RSQ=0.8980;ERATE=0.0081;THETA=0.0008;AC=919;AN=2184 GT:DS:GL:BD 0.42078754 0
1 2803819 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.917;LDAF=0.0069;AVGPOST=0.9969;RSQ=0.8252;ERATE=0.0006;THETA=0.0022;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2804017 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.356;LDAF=0.0080;AVGPOST=0.9902;RSQ=0.5231;ERATE=0.0018;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2804118 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4158;ERATE=0.0004;THETA=0.0053;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2804119 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2804167 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.892;LDAF=0.0082;AVGPOST=0.9977;RSQ=0.8894;ERATE=0.0004;THETA=0.0011;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2804179 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5667;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2804251 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0036;AVGPOST=0.9982;RSQ=0.7941;ERATE=0.0004;THETA=0.0034;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2804270 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.702;LDAF=0.0043;AVGPOST=0.9952;RSQ=0.5564;ERATE=0.0005;THETA=0.0022;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2804278 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.956;LDAF=0.5913;AVGPOST=0.9607;RSQ=0.9400;ERATE=0.0008;THETA=0.0017;AC=1291;AN=2184 GT:DS:GL:BD 0.59111720 1
1 2804332 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.915;LDAF=0.0269;AVGPOST=0.9931;RSQ=0.9032;ERATE=0.0006;THETA=0.0008;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 2804341 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.657;LDAF=0.0131;AVGPOST=0.9923;RSQ=0.7776;ERATE=0.0004;THETA=0.0111;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2804400 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.946;LDAF=0.0431;AVGPOST=0.9943;RSQ=0.9514;ERATE=0.0007;THETA=0.0007;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 2804447 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.813;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5341;ERATE=0.0005;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2804473 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.962;LDAF=0.0908;AVGPOST=0.9901;RSQ=0.9551;ERATE=0.0004;THETA=0.0048;AC=196;AN=2184 GT:DS:GL:BD 0.08974359 0
1 2804478 rs34131736 CT C 7951 PASS INDEL;BAVGPOST=0.992;BRSQ=0.961;LDAF=0.0897;AVGPOST=0.9896;RSQ=0.9501;ERATE=0.0005;THETA=0.0132;AC=194;AN=2184 GT:DS:GL:BD 0.08882784 0
1 2804551 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0024;AVGPOST=0.9972;RSQ=0.5313;ERATE=0.0010;THETA=0.0167;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2804561 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.686;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.6401;ERATE=0.0005;THETA=0.0090;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2804622 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.571;LDAF=0.0066;AVGPOST=0.9918;RSQ=0.5551;ERATE=0.0009;THETA=0.0014;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2804666 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.869;LDAF=0.0276;AVGPOST=0.9895;RSQ=0.8627;ERATE=0.0005;THETA=0.0075;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 2804734 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.785;LDAF=0.0033;AVGPOST=0.9968;RSQ=0.6252;ERATE=0.0006;THETA=0.0084;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2804810 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.961;BRSQ=0.844;LDAF=0.1215;AVGPOST=0.9574;RSQ=0.8569;ERATE=0.0024;THETA=0.0087;AC=248;AN=2184 GT:DS:GL:BD 0.11355311 0
1 2804827 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0078;AVGPOST=0.9971;RSQ=0.8862;ERATE=0.0004;THETA=0.0065;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2804903 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.822;LDAF=0.0402;AVGPOST=0.9843;RSQ=0.8580;ERATE=0.0022;THETA=0.0012;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 2804931 . C CG 601 PASS INDEL;BAVGPOST=0.936;BRSQ=0.472;LDAF=0.1044;AVGPOST=0.8919;RSQ=0.5621;ERATE=0.0082;THETA=0.0025;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 2805008 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.949;BRSQ=0.614;LDAF=0.0735;AVGPOST=0.9320;RSQ=0.6382;ERATE=0.0064;THETA=0.0029;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 2805028 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.792;LDAF=0.0609;AVGPOST=0.9569;RSQ=0.7338;ERATE=0.0040;THETA=0.0195;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 2805055 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.465;LDAF=0.0053;AVGPOST=0.9933;RSQ=0.4623;ERATE=0.0011;THETA=0.0025;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2805109 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.560;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5980;ERATE=0.0004;THETA=0.0051;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2805151 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.873;LDAF=0.0024;AVGPOST=0.9992;RSQ=0.8577;ERATE=0.0003;THETA=0.0054;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2805152 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0037;AVGPOST=0.9986;RSQ=0.8546;ERATE=0.0004;THETA=0.0048;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2805184 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0045;AVGPOST=0.9975;RSQ=0.7772;ERATE=0.0003;THETA=0.0177;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2805193 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.750;LDAF=0.0117;AVGPOST=0.9949;RSQ=0.8275;ERATE=0.0009;THETA=0.0142;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 2805221 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.601;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4067;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2805223 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.830;LDAF=0.0071;AVGPOST=0.9977;RSQ=0.8553;ERATE=0.0004;THETA=0.0085;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2805341 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.950;LDAF=0.0036;AVGPOST=0.9990;RSQ=0.8840;ERATE=0.0003;THETA=0.0124;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2805508 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.927;LDAF=0.0118;AVGPOST=0.9973;RSQ=0.9158;ERATE=0.0004;THETA=0.0036;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 2805516 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.935;LDAF=0.0103;AVGPOST=0.9975;RSQ=0.8957;ERATE=0.0004;THETA=0.0112;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2805619 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.5243;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2805632 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.733;LDAF=0.0031;AVGPOST=0.9970;RSQ=0.6217;ERATE=0.0004;THETA=0.0115;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2805812 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0021;AVGPOST=0.9983;RSQ=0.6560;ERATE=0.0004;THETA=0.0106;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2805896 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.961;LDAF=0.2017;AVGPOST=0.9715;RSQ=0.9337;ERATE=0.0009;THETA=0.0004;AC=438;AN=2184 GT:DS:GL:BD 0.20054945 0
1 2805939 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.752;LDAF=0.0027;AVGPOST=0.9982;RSQ=0.6928;ERATE=0.0006;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2806022 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.5920;ERATE=0.0007;THETA=0.0036;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2806088 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0188;AVGPOST=0.9975;RSQ=0.9395;ERATE=0.0005;THETA=0.0007;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 2806107 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.981;LDAF=0.5814;AVGPOST=0.9697;RSQ=0.9610;ERATE=0.0012;THETA=0.0039;AC=1280;AN=2184 GT:DS:GL:BD 0.58608061 1
1 2806174 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0248;AVGPOST=0.9966;RSQ=0.9496;ERATE=0.0006;THETA=0.0035;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 2806201 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.979;LDAF=0.0716;AVGPOST=0.9931;RSQ=0.9583;ERATE=0.0014;THETA=0.0010;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 2806287 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.966;LDAF=0.0885;AVGPOST=0.9878;RSQ=0.9394;ERATE=0.0015;THETA=0.0014;AC=189;AN=2184 GT:DS:GL:BD 0.08653846 0
1 2806390 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.982;LDAF=0.0827;AVGPOST=0.9958;RSQ=0.9776;ERATE=0.0007;THETA=0.0004;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 2806484 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.637;BRSQ=0.339;LDAF=0.4870;AVGPOST=0.7229;RSQ=0.5620;ERATE=0.0094;THETA=0.0006;AC=1027;AN=2184 GT:DS:GL:BD 0.47023809 0
1 2806755 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.986;LDAF=0.4555;AVGPOST=0.9772;RSQ=0.9656;ERATE=0.0011;THETA=0.0010;AC=995;AN=2184 GT:DS:GL:BD 0.45558608 0
1 2806780 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0172;AVGPOST=0.9991;RSQ=0.9751;ERATE=0.0005;THETA=0.0004;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 2806798 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.920;LDAF=0.0073;AVGPOST=0.9982;RSQ=0.8972;ERATE=0.0004;THETA=0.0008;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2806818 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.934;LDAF=0.0143;AVGPOST=0.9981;RSQ=0.9516;ERATE=0.0004;THETA=0.0015;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 2806890 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.974;LDAF=0.0401;AVGPOST=0.9963;RSQ=0.9705;ERATE=0.0004;THETA=0.0006;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 2806916 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.944;LDAF=0.0172;AVGPOST=0.9993;RSQ=0.9803;ERATE=0.0005;THETA=0.0014;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 2806927 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.940;LDAF=0.0165;AVGPOST=0.9989;RSQ=0.9699;ERATE=0.0005;THETA=0.0009;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 2807068 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.941;LDAF=0.0126;AVGPOST=0.9990;RSQ=0.9673;ERATE=0.0004;THETA=0.0009;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 2807076 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.941;LDAF=0.0136;AVGPOST=0.9991;RSQ=0.9712;ERATE=0.0004;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2807093 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0172;AVGPOST=0.9994;RSQ=0.9826;ERATE=0.0004;THETA=0.0013;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 2807116 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5521;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2807138 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.980;LDAF=0.0375;AVGPOST=0.9964;RSQ=0.9677;ERATE=0.0004;THETA=0.0010;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 2807156 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0103;AVGPOST=0.9990;RSQ=0.9558;ERATE=0.0005;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 2807191 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6878;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2807220 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.609;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7903;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2807261 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8381;ERATE=0.0004;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2807327 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.721;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2807328 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.835;LDAF=0.0040;AVGPOST=0.9984;RSQ=0.8385;ERATE=0.0004;THETA=0.0011;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2807341 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0133;AVGPOST=0.9999;RSQ=0.9969;ERATE=0.0003;THETA=0.0013;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2807481 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.921;LDAF=0.0079;AVGPOST=0.9980;RSQ=0.8907;ERATE=0.0004;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2807515 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0022;AVGPOST=0.9985;RSQ=0.8018;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2807561 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0184;AVGPOST=0.9994;RSQ=0.9847;ERATE=0.0003;THETA=0.0010;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 2807564 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0133;AVGPOST=0.9997;RSQ=0.9891;ERATE=0.0004;THETA=0.0008;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2807572 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0133;AVGPOST=0.9998;RSQ=0.9922;ERATE=0.0003;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2807573 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2807597 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0035;AVGPOST=0.9979;RSQ=0.7805;ERATE=0.0006;THETA=0.0018;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2807602 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0133;AVGPOST=0.9997;RSQ=0.9906;ERATE=0.0003;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2807679 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8625;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2807751 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0030;AVGPOST=0.9985;RSQ=0.8399;ERATE=0.0003;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2807756 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0018;AVGPOST=0.9980;RSQ=0.5703;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2807778 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0028;AVGPOST=0.9984;RSQ=0.7826;ERATE=0.0004;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2807845 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.785;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6934;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2807879 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.698;LDAF=0.0039;AVGPOST=0.9951;RSQ=0.5328;ERATE=0.0007;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2807882 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.570;LDAF=0.0066;AVGPOST=0.9904;RSQ=0.4567;ERATE=0.0007;THETA=0.0024;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2807906 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0140;AVGPOST=0.9984;RSQ=0.9482;ERATE=0.0006;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2807923 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0023;AVGPOST=0.9992;RSQ=0.8672;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2807948 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.757;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4616;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2808002 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0038;AVGPOST=0.9959;RSQ=0.6256;ERATE=0.0005;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2808006 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0137;AVGPOST=0.9990;RSQ=0.9711;ERATE=0.0005;THETA=0.0015;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2808061 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.755;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7448;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2808143 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0138;AVGPOST=0.9988;RSQ=0.9623;ERATE=0.0004;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2808215 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0260;AVGPOST=0.9977;RSQ=0.9640;ERATE=0.0005;THETA=0.0009;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 2808280 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0149;AVGPOST=0.9966;RSQ=0.9095;ERATE=0.0009;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2808371 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0142;AVGPOST=0.9982;RSQ=0.9435;ERATE=0.0004;THETA=0.0007;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2808386 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.940;LDAF=0.0133;AVGPOST=0.9988;RSQ=0.9607;ERATE=0.0004;THETA=0.0007;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2808411 rs112312181 C CCGG 1015 PASS INDEL;BAVGPOST=0.997;BRSQ=0.900;LDAF=0.0152;AVGPOST=0.9958;RSQ=0.8835;ERATE=0.0008;THETA=0.0008;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 2808451 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.643;LDAF=0.0031;AVGPOST=0.9984;RSQ=0.7702;ERATE=0.0005;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2808479 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0133;AVGPOST=0.9997;RSQ=0.9906;ERATE=0.0003;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2808524 rs112751896 GC G 423 PASS INDEL;BAVGPOST=0.998;BRSQ=0.923;LDAF=0.0134;AVGPOST=0.9990;RSQ=0.9660;ERATE=0.0005;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2808548 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.946;LDAF=0.1819;AVGPOST=0.9715;RSQ=0.9266;ERATE=0.0008;THETA=0.0009;AC=396;AN=2184 GT:DS:GL:BD 0.18131869 0
1 2808553 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.986;LDAF=0.5370;AVGPOST=0.9801;RSQ=0.9728;ERATE=0.0013;THETA=0.0015;AC=1176;AN=2184 GT:DS:GL:BD 0.53846157 1
1 2808565 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.595;LDAF=0.0059;AVGPOST=0.9928;RSQ=0.4725;ERATE=0.0013;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2808572 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.858;LDAF=0.0209;AVGPOST=0.9927;RSQ=0.8558;ERATE=0.0007;THETA=0.0002;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 2808605 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.902;LDAF=0.0208;AVGPOST=0.9897;RSQ=0.8014;ERATE=0.0018;THETA=0.0026;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 2808733 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0155;AVGPOST=0.9990;RSQ=0.9723;ERATE=0.0005;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 2808748 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.395;LDAF=0.0037;AVGPOST=0.9957;RSQ=0.4718;ERATE=0.0008;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2808749 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.987;LDAF=0.5343;AVGPOST=0.9767;RSQ=0.9690;ERATE=0.0014;THETA=0.0004;AC=1169;AN=2184 GT:DS:GL:BD 0.53525639 1
1 2808802 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.6204;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2808813 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0101;AVGPOST=0.9996;RSQ=0.9831;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 2808875 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.8754;ERATE=0.0004;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2808883 . AGCCTGGT A 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.708;LDAF=0.0026;AVGPOST=0.9969;RSQ=0.5097;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2808895 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0151;AVGPOST=0.9994;RSQ=0.9829;ERATE=0.0004;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 2809061 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.833;LDAF=0.0028;AVGPOST=0.9983;RSQ=0.7752;ERATE=0.0004;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2809065 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6120;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2809080 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.825;LDAF=0.0027;AVGPOST=0.9983;RSQ=0.7426;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2809113 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0133;AVGPOST=0.9998;RSQ=0.9938;ERATE=0.0003;THETA=0.0007;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2809207 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4354;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2809225 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.550;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4043;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2809310 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.714;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7397;ERATE=0.0004;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2809339 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0137;AVGPOST=0.9991;RSQ=0.9698;ERATE=0.0005;THETA=0.0008;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2809442 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0126;AVGPOST=0.9992;RSQ=0.9724;ERATE=0.0004;THETA=0.0020;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 2809521 . G GA 675 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0138;AVGPOST=0.9988;RSQ=0.9606;ERATE=0.0006;THETA=0.0008;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2809525 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.570;LDAF=0.0021;AVGPOST=0.9963;RSQ=0.3579;ERATE=0.0007;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2809526 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.643;LDAF=0.0047;AVGPOST=0.9948;RSQ=0.5606;ERATE=0.0014;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2809527 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0462;AVGPOST=0.9987;RSQ=0.9893;ERATE=0.0004;THETA=0.0009;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 2809568 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.990;LDAF=0.5786;AVGPOST=0.9810;RSQ=0.9745;ERATE=0.0016;THETA=0.0016;AC=1265;AN=2184 GT:DS:GL:BD 0.57921243 1
1 2809710 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.593;LDAF=0.0033;AVGPOST=0.9970;RSQ=0.6365;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2809844 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6016;ERATE=0.0006;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2809872 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0055;AVGPOST=0.9978;RSQ=0.8631;ERATE=0.0005;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2809911 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0058;AVGPOST=0.9982;RSQ=0.8677;ERATE=0.0005;THETA=0.0010;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2809934 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5774;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2809992 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8116;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2810036 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0133;AVGPOST=0.9998;RSQ=0.9939;ERATE=0.0003;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2810066 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0022;AVGPOST=0.9994;RSQ=0.9175;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2810114 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0431;AVGPOST=0.9963;RSQ=0.9747;ERATE=0.0005;THETA=0.0004;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 2810137 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9149;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2810204 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0827;AVGPOST=0.9993;RSQ=0.9963;ERATE=0.0003;THETA=0.0006;AC=181;AN=2184 GT:DS:GL:BD 0.08287546 0
1 2810243 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.746;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6745;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2810269 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.656;LDAF=0.0495;AVGPOST=0.9633;RSQ=0.6882;ERATE=0.0259;THETA=0.0005;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 2810297 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0036;AVGPOST=0.9991;RSQ=0.9142;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2810344 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.804;LDAF=0.0057;AVGPOST=0.9981;RSQ=0.8535;ERATE=0.0005;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2810364 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0056;AVGPOST=0.9986;RSQ=0.8874;ERATE=0.0005;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2810455 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7559;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2810465 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0148;AVGPOST=0.9995;RSQ=0.9847;ERATE=0.0003;THETA=0.0009;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 2810473 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0830;AVGPOST=0.9985;RSQ=0.9926;ERATE=0.0004;THETA=0.0009;AC=181;AN=2184 GT:DS:GL:BD 0.08287546 0
1 2810495 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0481;AVGPOST=0.9993;RSQ=0.9934;ERATE=0.0005;THETA=0.0010;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 2810518 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0136;AVGPOST=0.9991;RSQ=0.9699;ERATE=0.0006;THETA=0.0008;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2810560 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.897;LDAF=0.0069;AVGPOST=0.9973;RSQ=0.8764;ERATE=0.0005;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2810563 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.648;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6495;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2810624 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0041;AVGPOST=0.9956;RSQ=0.6070;ERATE=0.0005;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2810633 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0104;AVGPOST=0.9985;RSQ=0.9435;ERATE=0.0004;THETA=0.0014;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 2810639 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.780;LDAF=0.0031;AVGPOST=0.9985;RSQ=0.8087;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2810664 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0138;AVGPOST=0.9989;RSQ=0.9660;ERATE=0.0005;THETA=0.0008;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2810674 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0147;AVGPOST=0.9996;RSQ=0.9876;ERATE=0.0003;THETA=0.0010;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 2810718 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0150;AVGPOST=0.9990;RSQ=0.9711;ERATE=0.0005;THETA=0.0006;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 2810791 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.928;LDAF=0.0288;AVGPOST=0.9930;RSQ=0.9040;ERATE=0.0005;THETA=0.0004;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 2810796 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0048;AVGPOST=0.9980;RSQ=0.8630;ERATE=0.0004;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2810847 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0035;AVGPOST=0.9984;RSQ=0.7960;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2810951 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.846;LDAF=0.0046;AVGPOST=0.9985;RSQ=0.8661;ERATE=0.0005;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2810952 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.726;LDAF=0.0157;AVGPOST=0.9887;RSQ=0.7163;ERATE=0.0009;THETA=0.0009;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 2810957 rs113375988 C CCCAG 1708 PASS INDEL;BAVGPOST=0.996;BRSQ=0.825;LDAF=0.0149;AVGPOST=0.9971;RSQ=0.9169;ERATE=0.0008;THETA=0.0013;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 2811018 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.525;LDAF=0.9942;AVGPOST=0.9935;RSQ=0.5439;ERATE=0.0010;THETA=0.0005;AC=2173;AN=2184 GT:DS:GL:BD 0.99496335 1
1 2811028 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.832;LDAF=0.0225;AVGPOST=0.9948;RSQ=0.9130;ERATE=0.0006;THETA=0.0007;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 2811112 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.863;LDAF=0.0087;AVGPOST=0.9918;RSQ=0.6313;ERATE=0.0012;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2811218 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.694;LDAF=0.0033;AVGPOST=0.9962;RSQ=0.5245;ERATE=0.0010;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2811263 . TCCTCCCCACCCTGA T 12413 PASS INDEL;BAVGPOST=0.975;BRSQ=0.930;LDAF=0.1927;AVGPOST=0.9581;RSQ=0.8962;ERATE=0.0017;THETA=0.0032;AC=409;AN=2184 GT:DS:GL:BD 0.18727106 0
1 2811290 . G GA 579 PASS INDEL;BAVGPOST=0.967;BRSQ=0.542;LDAF=0.0627;AVGPOST=0.9333;RSQ=0.5347;ERATE=0.0101;THETA=0.0008;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 2811323 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0156;AVGPOST=0.9968;RSQ=0.9148;ERATE=0.0007;THETA=0.0008;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 2811347 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.951;LDAF=0.0172;AVGPOST=0.9976;RSQ=0.9449;ERATE=0.0005;THETA=0.0007;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 2811402 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.897;LDAF=0.0183;AVGPOST=0.9910;RSQ=0.8066;ERATE=0.0005;THETA=0.0006;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 2811412 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0021;AVGPOST=0.9976;RSQ=0.4892;ERATE=0.0008;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2811418 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.464;LDAF=0.0065;AVGPOST=0.9901;RSQ=0.4316;ERATE=0.0010;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2811427 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.893;LDAF=0.0142;AVGPOST=0.9949;RSQ=0.8598;ERATE=0.0005;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 2811479 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.745;LDAF=0.0093;AVGPOST=0.9928;RSQ=0.6670;ERATE=0.0015;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2811500 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.672;LDAF=0.0030;AVGPOST=0.9977;RSQ=0.6727;ERATE=0.0005;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2811625 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.758;LDAF=0.0077;AVGPOST=0.9946;RSQ=0.7070;ERATE=0.0008;THETA=0.0009;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2811660 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.760;LDAF=0.0171;AVGPOST=0.9924;RSQ=0.8207;ERATE=0.0007;THETA=0.0012;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 2811694 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0135;AVGPOST=0.9993;RSQ=0.9774;ERATE=0.0003;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2811725 . CTG C 52 PASS INDEL;BAVGPOST=1.000;BRSQ=0.676;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.3280;ERATE=0.0006;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2811814 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1833;AVGPOST=0.9948;RSQ=0.9873;ERATE=0.0006;THETA=0.0019;AC=397;AN=2184 GT:DS:GL:BD 0.18177655 0
1 2811841 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2811888 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0186;AVGPOST=0.9990;RSQ=0.9776;ERATE=0.0004;THETA=0.0004;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 2811909 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0073;AVGPOST=0.9968;RSQ=0.8354;ERATE=0.0003;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2811917 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.779;LDAF=0.0033;AVGPOST=0.9983;RSQ=0.7745;ERATE=0.0006;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2811988 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.983;LDAF=0.2376;AVGPOST=0.9855;RSQ=0.9705;ERATE=0.0040;THETA=0.0009;AC=518;AN=2184 GT:DS:GL:BD 0.23717949 0
1 2812023 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7607;ERATE=0.0004;THETA=0.0044;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2812044 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0062;AVGPOST=0.9985;RSQ=0.8999;ERATE=0.0004;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2812045 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7377;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2812090 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5186;ERATE=0.0006;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2812243 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0058;AVGPOST=0.9994;RSQ=0.9506;ERATE=0.0004;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2812244 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.961;LDAF=0.2587;AVGPOST=0.9580;RSQ=0.9155;ERATE=0.0060;THETA=0.0030;AC=547;AN=2184 GT:DS:GL:BD 0.25045788 0
1 2812252 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.927;LDAF=0.0493;AVGPOST=0.9905;RSQ=0.9215;ERATE=0.0005;THETA=0.0004;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 2812257 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.3712;ERATE=0.0006;THETA=0.0040;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2812260 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0068;AVGPOST=0.9973;RSQ=0.8642;ERATE=0.0004;THETA=0.0037;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2812355 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.939;LDAF=0.0468;AVGPOST=0.9973;RSQ=0.9775;ERATE=0.0008;THETA=0.0030;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 2812399 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0057;AVGPOST=0.9993;RSQ=0.9392;ERATE=0.0004;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2812451 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.652;LDAF=0.0035;AVGPOST=0.9970;RSQ=0.6449;ERATE=0.0004;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2812540 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.601;LDAF=0.0021;AVGPOST=0.9966;RSQ=0.4023;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2812564 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.764;LDAF=0.0019;AVGPOST=0.9970;RSQ=0.3596;ERATE=0.0005;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2812646 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.972;LDAF=0.2609;AVGPOST=0.9798;RSQ=0.9605;ERATE=0.0024;THETA=0.0007;AC=562;AN=2184 GT:DS:GL:BD 0.25732601 0
1 2812670 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0035;AVGPOST=0.9984;RSQ=0.8078;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2812692 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.5170;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2813001 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0009;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2813016 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2813046 . GCA G 343 PASS INDEL;BAVGPOST=0.998;BRSQ=0.692;LDAF=0.0312;AVGPOST=0.9477;RSQ=0.3350;ERATE=0.0026;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2813055 . CAT C 457 PASS INDEL;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.9245;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2813059 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9019;ERATE=0.0004;THETA=0.0018;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2813083 . G GCA 135 PASS INDEL;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0023;AVGPOST=0.9992;RSQ=0.8543;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2813090 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0029;AVGPOST=0.9992;RSQ=0.8784;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2813107 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.736;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7182;ERATE=0.0011;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2813151 . ACG A 12912 PASS INDEL;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0348;AVGPOST=0.9985;RSQ=0.9839;ERATE=0.0004;THETA=0.0009;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 2813166 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8481;ERATE=0.0005;THETA=0.0051;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2813229 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2813233 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0082;AVGPOST=0.9987;RSQ=0.9368;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2813359 . GCA G 1028 PASS INDEL;BAVGPOST=0.994;BRSQ=0.832;LDAF=0.0181;AVGPOST=0.9939;RSQ=0.8793;ERATE=0.0027;THETA=0.0007;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 2813366 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2813400 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2813435 . GCA G 289 PASS INDEL;BAVGPOST=0.999;BRSQ=0.762;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.5671;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2813474 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3875;AVGPOST=0.9959;RSQ=0.9937;ERATE=0.0005;THETA=0.0013;AC=849;AN=2184 GT:DS:GL:BD 0.38873628 0
1 2813560 . TAC T 6 PASS INDEL;BAVGPOST=0.998;BRSQ=0.707;LDAF=0.0031;AVGPOST=0.9979;RSQ=0.7572;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2813566 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0196;AVGPOST=0.9997;RSQ=0.9929;ERATE=0.0003;THETA=0.0005;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 2813605 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.665;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7648;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2813750 . GCA G 901 PASS INDEL;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0041;AVGPOST=0.9995;RSQ=0.9479;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2813776 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9535;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2813794 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0029;AVGPOST=0.9992;RSQ=0.8739;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2813795 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0389;AVGPOST=0.9999;RSQ=0.9985;ERATE=0.0003;THETA=0.0003;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 2813828 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0123;AVGPOST=0.9992;RSQ=0.9762;ERATE=0.0004;THETA=0.0012;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 2813917 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0157;AVGPOST=0.9984;RSQ=0.9585;ERATE=0.0004;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 2813936 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0018;AVGPOST=0.9994;RSQ=0.8632;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2814099 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0024;AVGPOST=0.9986;RSQ=0.7564;ERATE=0.0006;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2814264 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0019;AVGPOST=0.9978;RSQ=0.5607;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2814281 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0076;AVGPOST=0.9986;RSQ=0.9259;ERATE=0.0003;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 2814302 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2814430 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.845;LDAF=0.0090;AVGPOST=0.9967;RSQ=0.8622;ERATE=0.0005;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2814492 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5811;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2814560 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.750;LDAF=0.0021;AVGPOST=0.9982;RSQ=0.6594;ERATE=0.0005;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2814612 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5546;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2814692 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6367;ERATE=0.0006;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2814789 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0210;AVGPOST=0.9978;RSQ=0.9568;ERATE=0.0003;THETA=0.0015;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 2814873 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.695;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5715;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2815100 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2815170 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0097;AVGPOST=0.9996;RSQ=0.9822;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 2815250 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9512;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2815458 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4450;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2815487 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.879;LDAF=0.0135;AVGPOST=0.9951;RSQ=0.8594;ERATE=0.0004;THETA=0.0032;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 2815520 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.881;LDAF=0.0063;AVGPOST=0.9974;RSQ=0.8547;ERATE=0.0004;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2815529 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.923;LDAF=0.0099;AVGPOST=0.9989;RSQ=0.9499;ERATE=0.0005;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 2815772 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2815924 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0113;AVGPOST=0.9967;RSQ=0.9062;ERATE=0.0005;THETA=0.0011;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 2815927 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0115;AVGPOST=0.9956;RSQ=0.8847;ERATE=0.0005;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 2816061 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0072;AVGPOST=0.9994;RSQ=0.9668;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 2816092 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0106;AVGPOST=0.9975;RSQ=0.9135;ERATE=0.0004;THETA=0.0010;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 2816102 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.953;LDAF=0.0101;AVGPOST=0.9983;RSQ=0.9249;ERATE=0.0005;THETA=0.0007;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 2816155 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.734;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.5563;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2816259 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5959;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2816300 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0432;AVGPOST=0.9967;RSQ=0.9723;ERATE=0.0005;THETA=0.0004;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 2816377 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0113;AVGPOST=0.9991;RSQ=0.9627;ERATE=0.0004;THETA=0.0007;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 2816380 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.6197;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2816403 . CT C 839 PASS INDEL;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0108;AVGPOST=0.9965;RSQ=0.8897;ERATE=0.0005;THETA=0.0026;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 2816418 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7384;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2816448 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6913;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2816502 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0361;AVGPOST=0.9990;RSQ=0.9892;ERATE=0.0005;THETA=0.0003;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 2816574 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7698;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2816581 rs34966309 C CG 28202 PASS INDEL;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.3927;AVGPOST=0.9844;RSQ=0.9764;ERATE=0.0010;THETA=0.0007;AC=861;AN=2184 GT:DS:GL:BD 0.39423078 0
1 2816646 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9799;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2816718 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0101;AVGPOST=0.9986;RSQ=0.9464;ERATE=0.0004;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 2816830 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0173;AVGPOST=0.9990;RSQ=0.9799;ERATE=0.0004;THETA=0.0005;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 2816857 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0042;AVGPOST=0.9982;RSQ=0.8694;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2816913 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0026;AVGPOST=0.9988;RSQ=0.8341;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2817237 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.696;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.5216;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2817258 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0334;AVGPOST=0.9979;RSQ=0.9759;ERATE=0.0004;THETA=0.0007;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 2817269 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0045;AVGPOST=0.9993;RSQ=0.9223;ERATE=0.0005;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2817421 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3113;AVGPOST=0.9964;RSQ=0.9936;ERATE=0.0006;THETA=0.0006;AC=679;AN=2184 GT:DS:GL:BD 0.31089744 0
1 2817426 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6343;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2817450 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.581;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9525;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2817511 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.462;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.3436;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2817541 rs35641012 TG T 520 PASS INDEL;BAVGPOST=0.996;BRSQ=0.821;LDAF=0.0073;AVGPOST=0.9949;RSQ=0.7569;ERATE=0.0006;THETA=0.0008;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2817576 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7494;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2817594 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.2184;AVGPOST=0.9968;RSQ=0.9927;ERATE=0.0005;THETA=0.0008;AC=477;AN=2184 GT:DS:GL:BD 0.21840659 0
1 2817768 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0036;AVGPOST=0.9986;RSQ=0.8286;ERATE=0.0005;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2817817 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0167;AVGPOST=0.9995;RSQ=0.9866;ERATE=0.0003;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 2817823 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0069;AVGPOST=0.9996;RSQ=0.9746;ERATE=0.0004;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 2817826 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.547;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4922;ERATE=0.0005;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2817880 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0040;AVGPOST=0.9991;RSQ=0.8946;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2817898 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4118;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2817958 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6573;ERATE=0.0004;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2817959 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.805;LDAF=0.0073;AVGPOST=0.9974;RSQ=0.8487;ERATE=0.0005;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 2817983 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0028;AVGPOST=0.9972;RSQ=0.6210;ERATE=0.0006;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2818112 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0360;AVGPOST=0.9993;RSQ=0.9916;ERATE=0.0004;THETA=0.0004;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 2818162 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0110;AVGPOST=0.9975;RSQ=0.9070;ERATE=0.0005;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 2818252 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0061;AVGPOST=0.9991;RSQ=0.9452;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2818319 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0226;AVGPOST=0.9994;RSQ=0.9891;ERATE=0.0003;THETA=0.0004;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 2818418 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7141;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2818471 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6351;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2818481 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0168;AVGPOST=0.9992;RSQ=0.9814;ERATE=0.0004;THETA=0.0005;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 2818516 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0041;AVGPOST=0.9963;RSQ=0.6273;ERATE=0.0009;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2818542 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7515;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2818548 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0361;AVGPOST=0.9989;RSQ=0.9880;ERATE=0.0004;THETA=0.0003;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 2818554 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0017;AVGPOST=0.9986;RSQ=0.6786;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2818589 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0206;AVGPOST=0.9998;RSQ=0.9948;ERATE=0.0003;THETA=0.0007;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 2818606 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0019;AVGPOST=0.9986;RSQ=0.6710;ERATE=0.0007;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2818633 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2184;AVGPOST=0.9983;RSQ=0.9959;ERATE=0.0004;THETA=0.0005;AC=477;AN=2184 GT:DS:GL:BD 0.21840659 0
1 2818714 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0089;AVGPOST=0.9983;RSQ=0.9339;ERATE=0.0005;THETA=0.0008;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2818756 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0032;AVGPOST=0.9981;RSQ=0.7827;ERATE=0.0003;THETA=0.0021;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2818813 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0079;AVGPOST=0.9987;RSQ=0.9340;ERATE=0.0005;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2818823 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.726;LDAF=0.0020;AVGPOST=0.9986;RSQ=0.6813;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2818887 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0330;AVGPOST=0.9974;RSQ=0.9715;ERATE=0.0004;THETA=0.0004;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 2818910 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.961;LDAF=0.0194;AVGPOST=0.9971;RSQ=0.9399;ERATE=0.0007;THETA=0.0008;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 2818916 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.744;LDAF=0.0128;AVGPOST=0.9909;RSQ=0.7384;ERATE=0.0009;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 2818933 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0224;AVGPOST=0.9884;RSQ=0.8041;ERATE=0.0017;THETA=0.0003;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 2818981 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0096;AVGPOST=0.9965;RSQ=0.8504;ERATE=0.0007;THETA=0.0011;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2818984 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.804;LDAF=0.0167;AVGPOST=0.9869;RSQ=0.7174;ERATE=0.0023;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 2819001 . T TG 984 PASS INDEL;BAVGPOST=0.993;BRSQ=0.846;LDAF=0.0264;AVGPOST=0.9869;RSQ=0.8097;ERATE=0.0029;THETA=0.0010;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 2819009 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.661;LDAF=0.0118;AVGPOST=0.9905;RSQ=0.7225;ERATE=0.0005;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 2819019 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.918;LDAF=0.0289;AVGPOST=0.9919;RSQ=0.8790;ERATE=0.0016;THETA=0.0004;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 2819086 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.697;LDAF=0.0075;AVGPOST=0.9927;RSQ=0.6379;ERATE=0.0007;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2819110 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.0412;AVGPOST=0.9981;RSQ=0.9822;ERATE=0.0005;THETA=0.0003;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 2819115 . T TG 185 PASS INDEL;BAVGPOST=0.992;BRSQ=0.576;LDAF=0.0109;AVGPOST=0.9906;RSQ=0.6724;ERATE=0.0016;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2819154 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.599;LDAF=0.0059;AVGPOST=0.9920;RSQ=0.4747;ERATE=0.0013;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2819276 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.936;LDAF=0.0228;AVGPOST=0.9962;RSQ=0.9347;ERATE=0.0005;THETA=0.0004;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 2819307 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.961;LDAF=0.1883;AVGPOST=0.9644;RSQ=0.9140;ERATE=0.0037;THETA=0.0005;AC=399;AN=2184 GT:DS:GL:BD 0.18269230 0
1 2819344 . T TG 40 PASS INDEL;BAVGPOST=0.982;BRSQ=0.421;LDAF=0.0392;AVGPOST=0.9529;RSQ=0.4899;ERATE=0.0034;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 2819475 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.808;LDAF=0.0225;AVGPOST=0.9903;RSQ=0.8258;ERATE=0.0010;THETA=0.0003;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 2819481 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.774;LDAF=0.0319;AVGPOST=0.9792;RSQ=0.7369;ERATE=0.0042;THETA=0.0017;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 2819540 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5643;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2819559 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2918;AVGPOST=0.9962;RSQ=0.9922;ERATE=0.0006;THETA=0.0011;AC=637;AN=2184 GT:DS:GL:BD 0.29166666 0
1 2819576 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0077;AVGPOST=0.9992;RSQ=0.9557;ERATE=0.0005;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2819649 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0214;AVGPOST=0.9987;RSQ=0.9731;ERATE=0.0004;THETA=0.0006;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 2819802 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0081;AVGPOST=0.9994;RSQ=0.9774;ERATE=0.0003;THETA=0.0015;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2819868 . TCTC T 33 PASS INDEL;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0023;AVGPOST=0.9988;RSQ=0.7587;ERATE=0.0006;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2819902 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0074;AVGPOST=0.9997;RSQ=0.9850;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2819905 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0212;AVGPOST=0.9995;RSQ=0.9898;ERATE=0.0004;THETA=0.0005;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 2819990 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0041;AVGPOST=0.9955;RSQ=0.5829;ERATE=0.0018;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2820093 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0024;AVGPOST=0.9971;RSQ=0.5487;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2820234 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.718;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6050;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2820273 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0076;AVGPOST=0.9995;RSQ=0.9734;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2820305 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7393;ERATE=0.0004;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2820331 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6083;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2820521 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.415;LDAF=0.0061;AVGPOST=0.9926;RSQ=0.5159;ERATE=0.0011;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2820523 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2820528 rs76920333 GC G 15745 PASS INDEL;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1843;AVGPOST=0.9952;RSQ=0.9865;ERATE=0.0009;THETA=0.0007;AC=399;AN=2184 GT:DS:GL:BD 0.18269230 0
1 2820530 . CA C 1504 PASS INDEL;BAVGPOST=0.986;BRSQ=0.962;LDAF=0.1799;AVGPOST=0.9856;RSQ=0.9634;ERATE=0.0009;THETA=0.0005;AC=395;AN=2184 GT:DS:GL:BD 0.18086080 0
1 2820537 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0080;AVGPOST=0.9987;RSQ=0.9438;ERATE=0.0004;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2820585 . G GC 358 PASS INDEL;BAVGPOST=0.999;BRSQ=0.950;LDAF=0.0085;AVGPOST=0.9981;RSQ=0.9033;ERATE=0.0008;THETA=0.0007;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2820598 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0083;AVGPOST=0.9980;RSQ=0.9066;ERATE=0.0004;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2820643 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0085;AVGPOST=0.9985;RSQ=0.9322;ERATE=0.0006;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2820714 rs113679458 A AC 542 PASS INDEL;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0087;AVGPOST=0.9972;RSQ=0.8798;ERATE=0.0005;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2820861 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0372;AVGPOST=0.9969;RSQ=0.9651;ERATE=0.0003;THETA=0.0007;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 2820923 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.731;LDAF=0.0023;AVGPOST=0.9973;RSQ=0.5003;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2820955 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.428;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.4103;ERATE=0.0006;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2820972 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2731;AVGPOST=0.9955;RSQ=0.9916;ERATE=0.0004;THETA=0.0004;AC=593;AN=2184 GT:DS:GL:BD 0.27152014 0
1 2821050 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0101;AVGPOST=0.9996;RSQ=0.9831;ERATE=0.0003;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 2821127 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0046;AVGPOST=0.9989;RSQ=0.9016;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2821157 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.908;LDAF=0.0106;AVGPOST=0.9957;RSQ=0.8397;ERATE=0.0009;THETA=0.0048;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 2821405 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.770;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5854;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2821424 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0018;AVGPOST=0.9985;RSQ=0.6537;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2821544 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.682;LDAF=0.0025;AVGPOST=0.9970;RSQ=0.5099;ERATE=0.0005;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2821552 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.482;LDAF=0.0115;AVGPOST=0.9899;RSQ=0.6732;ERATE=0.0009;THETA=0.0010;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 2821591 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.913;LDAF=0.0102;AVGPOST=0.9952;RSQ=0.8168;ERATE=0.0009;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 2821620 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.972;LDAF=0.2996;AVGPOST=0.9920;RSQ=0.9852;ERATE=0.0013;THETA=0.0006;AC=653;AN=2184 GT:DS:GL:BD 0.29899266 0
1 2821706 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.320;LDAF=0.0124;AVGPOST=0.9892;RSQ=0.6606;ERATE=0.0010;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 2821762 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.628;LDAF=0.0051;AVGPOST=0.9920;RSQ=0.3074;ERATE=0.0013;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2821772 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.608;LDAF=0.0129;AVGPOST=0.9903;RSQ=0.7067;ERATE=0.0008;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 2821782 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.686;LDAF=0.0391;AVGPOST=0.9713;RSQ=0.7145;ERATE=0.0008;THETA=0.0003;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 2821801 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0044;AVGPOST=0.9967;RSQ=0.7097;ERATE=0.0005;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2821868 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2296;AVGPOST=0.9949;RSQ=0.9885;ERATE=0.0010;THETA=0.0003;AC=500;AN=2184 GT:DS:GL:BD 0.22893773 0
1 2821908 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.685;LDAF=0.0097;AVGPOST=0.9944;RSQ=0.7548;ERATE=0.0005;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 2821919 . C CT 229 PASS INDEL;BAVGPOST=0.995;BRSQ=0.624;LDAF=0.0058;AVGPOST=0.9932;RSQ=0.4977;ERATE=0.0019;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2821923 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.728;LDAF=0.0034;AVGPOST=0.9979;RSQ=0.7291;ERATE=0.0006;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2821931 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.669;LDAF=0.0036;AVGPOST=0.9958;RSQ=0.5230;ERATE=0.0009;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2822089 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0054;AVGPOST=0.9987;RSQ=0.8925;ERATE=0.0005;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2822131 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5107;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2822146 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2211;AVGPOST=0.9940;RSQ=0.9869;ERATE=0.0007;THETA=0.0009;AC=478;AN=2184 GT:DS:GL:BD 0.21886447 0
1 2822205 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.677;LDAF=0.0023;AVGPOST=0.9964;RSQ=0.4029;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2822302 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.469;LDAF=0.0070;AVGPOST=0.9941;RSQ=0.6556;ERATE=0.0007;THETA=0.0015;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2822412 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2258;AVGPOST=0.9947;RSQ=0.9880;ERATE=0.0008;THETA=0.0006;AC=492;AN=2184 GT:DS:GL:BD 0.22527473 0
1 2822414 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0023;AVGPOST=0.9972;RSQ=0.5678;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2822433 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0044;AVGPOST=0.9972;RSQ=0.7530;ERATE=0.0005;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2822455 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0079;AVGPOST=0.9997;RSQ=0.9850;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2822471 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0064;AVGPOST=0.9994;RSQ=0.9629;ERATE=0.0003;THETA=0.0008;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2822525 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.7696;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2822537 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2822573 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0040;AVGPOST=0.9975;RSQ=0.7710;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2822590 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.925;LDAF=0.0058;AVGPOST=0.9977;RSQ=0.8594;ERATE=0.0004;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2822674 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.8213;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2822738 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0043;AVGPOST=0.9991;RSQ=0.9250;ERATE=0.0004;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2822739 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5332;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2822748 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.2452;AVGPOST=0.9936;RSQ=0.9853;ERATE=0.0005;THETA=0.0002;AC=537;AN=2184 GT:DS:GL:BD 0.24587911 0
1 2822760 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0114;AVGPOST=0.9975;RSQ=0.9116;ERATE=0.0006;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 2822780 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.7031;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2822799 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0226;AVGPOST=0.9975;RSQ=0.9517;ERATE=0.0004;THETA=0.0003;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 2822863 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.6214;ERATE=0.0005;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2822997 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0027;AVGPOST=0.9983;RSQ=0.7931;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2823058 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0020;AVGPOST=0.9985;RSQ=0.6650;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2823162 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2823169 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.896;LDAF=0.0058;AVGPOST=0.9980;RSQ=0.8712;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2823182 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0059;AVGPOST=0.9991;RSQ=0.9439;ERATE=0.0004;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2823316 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.1830;AVGPOST=0.9973;RSQ=0.9928;ERATE=0.0006;THETA=0.0007;AC=399;AN=2184 GT:DS:GL:BD 0.18269230 0
1 2823325 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0428;AVGPOST=0.9963;RSQ=0.9704;ERATE=0.0007;THETA=0.0007;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 2823404 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0025;AVGPOST=0.9977;RSQ=0.5850;ERATE=0.0007;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2823413 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0026;AVGPOST=0.9984;RSQ=0.7373;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2823459 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.2468;AVGPOST=0.9870;RSQ=0.9712;ERATE=0.0029;THETA=0.0005;AC=538;AN=2184 GT:DS:GL:BD 0.24633700 0
1 2823506 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2991;AVGPOST=0.9971;RSQ=0.9944;ERATE=0.0004;THETA=0.0003;AC=654;AN=2184 GT:DS:GL:BD 0.29945055 0
1 2823637 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8666;ERATE=0.0004;THETA=0.0033;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2823639 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.743;LDAF=0.0031;AVGPOST=0.9984;RSQ=0.8058;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2823764 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8538;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2823790 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.748;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.3464;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2823804 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0159;AVGPOST=0.9985;RSQ=0.9644;ERATE=0.0003;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 2823830 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0044;AVGPOST=0.9927;RSQ=0.3036;ERATE=0.0015;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2823928 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.777;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2824055 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0084;AVGPOST=0.9988;RSQ=0.9507;ERATE=0.0004;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2824059 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.5709;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2824171 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.912;LDAF=0.0480;AVGPOST=0.9901;RSQ=0.9161;ERATE=0.0004;THETA=0.0005;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 2824184 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0067;AVGPOST=0.9985;RSQ=0.9201;ERATE=0.0004;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2824381 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.918;LDAF=0.0081;AVGPOST=0.9958;RSQ=0.7785;ERATE=0.0007;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2824396 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.751;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.5758;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2824415 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.709;LDAF=0.0365;AVGPOST=0.9857;RSQ=0.8689;ERATE=0.0006;THETA=0.0005;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 2824432 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.597;LDAF=0.0029;AVGPOST=0.9966;RSQ=0.4949;ERATE=0.0006;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2824435 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.506;LDAF=0.0049;AVGPOST=0.9940;RSQ=0.5089;ERATE=0.0008;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2824442 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.916;BRSQ=0.523;LDAF=0.1273;AVGPOST=0.8703;RSQ=0.5233;ERATE=0.0202;THETA=0.0005;AC=191;AN=2184 GT:DS:GL:BD 0.08745421 0
1 2824489 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.538;LDAF=0.0102;AVGPOST=0.9861;RSQ=0.4830;ERATE=0.0030;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 2824558 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9137;ERATE=0.0004;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2824620 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.879;LDAF=0.0101;AVGPOST=0.9986;RSQ=0.9350;ERATE=0.0006;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 2824712 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.908;LDAF=0.0109;AVGPOST=0.9991;RSQ=0.9640;ERATE=0.0004;THETA=0.0038;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 2824828 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0067;AVGPOST=0.9994;RSQ=0.9556;ERATE=0.0004;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2824878 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.833;LDAF=0.0051;AVGPOST=0.9974;RSQ=0.8004;ERATE=0.0004;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2824896 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7338;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2824919 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.4099;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2824949 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5195;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2824989 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.987;LDAF=0.2201;AVGPOST=0.9958;RSQ=0.9915;ERATE=0.0005;THETA=0.0006;AC=481;AN=2184 GT:DS:GL:BD 0.22023809 0
1 2825154 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.989;LDAF=0.2571;AVGPOST=0.9853;RSQ=0.9702;ERATE=0.0016;THETA=0.0008;AC=558;AN=2184 GT:DS:GL:BD 0.25549451 0
1 2825170 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0098;AVGPOST=0.9989;RSQ=0.9509;ERATE=0.0004;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 2825217 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.816;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6309;ERATE=0.0008;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2825256 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8666;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2825367 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.3468;AVGPOST=0.9947;RSQ=0.9910;ERATE=0.0006;THETA=0.0010;AC=759;AN=2184 GT:DS:GL:BD 0.34752747 0
1 2825384 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.899;LDAF=0.0071;AVGPOST=0.9964;RSQ=0.8017;ERATE=0.0005;THETA=0.0010;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2825402 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0014;AVGPOST=0.9992;RSQ=0.7428;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2825415 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0018;AVGPOST=0.9980;RSQ=0.5636;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2825481 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8096;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2825626 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0023;AVGPOST=0.9992;RSQ=0.8554;ERATE=0.0003;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2825674 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0056;AVGPOST=0.9970;RSQ=0.7842;ERATE=0.0007;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2825790 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.798;LDAF=0.0022;AVGPOST=0.9974;RSQ=0.5132;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2825835 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9412;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2825849 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2825872 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9244;ERATE=0.0003;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2825882 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0044;AVGPOST=0.9984;RSQ=0.8456;ERATE=0.0005;THETA=0.0023;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2826044 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0253;AVGPOST=0.9994;RSQ=0.9894;ERATE=0.0004;THETA=0.0006;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 2826061 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0110;AVGPOST=0.9977;RSQ=0.9231;ERATE=0.0004;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 2826074 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.964;LDAF=0.0211;AVGPOST=0.9975;RSQ=0.9553;ERATE=0.0004;THETA=0.0011;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 2826076 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8803;ERATE=0.0004;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2826120 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0066;AVGPOST=0.9995;RSQ=0.9644;ERATE=0.0004;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2826162 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0068;AVGPOST=0.9988;RSQ=0.9266;ERATE=0.0004;THETA=0.0034;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2826163 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.2785;AVGPOST=0.9914;RSQ=0.9841;ERATE=0.0007;THETA=0.0003;AC=608;AN=2184 GT:DS:GL:BD 0.27838829 0
1 2826206 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5921;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2826318 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0096;AVGPOST=0.9995;RSQ=0.9803;ERATE=0.0003;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 2826364 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8359;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2826369 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.876;LDAF=0.0595;AVGPOST=0.9814;RSQ=0.8806;ERATE=0.0006;THETA=0.0030;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 2826484 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.561;LDAF=0.0062;AVGPOST=0.9906;RSQ=0.3882;ERATE=0.0009;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2826553 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.510;LDAF=0.0046;AVGPOST=0.9950;RSQ=0.5493;ERATE=0.0010;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2826561 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.673;LDAF=0.0041;AVGPOST=0.9952;RSQ=0.4904;ERATE=0.0006;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2826587 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.949;BRSQ=0.916;LDAF=0.3088;AVGPOST=0.9512;RSQ=0.9223;ERATE=0.0017;THETA=0.0007;AC=672;AN=2184 GT:DS:GL:BD 0.30769232 0
1 2826692 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5035;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2826739 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0071;AVGPOST=0.9994;RSQ=0.9616;ERATE=0.0004;THETA=0.0010;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 2826787 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.768;LDAF=0.0037;AVGPOST=0.9977;RSQ=0.7320;ERATE=0.0005;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2826891 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0080;AVGPOST=0.9975;RSQ=0.8972;ERATE=0.0004;THETA=0.0008;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2826899 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0031;AVGPOST=0.9990;RSQ=0.8692;ERATE=0.0004;THETA=0.0022;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2827056 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0209;AVGPOST=0.9981;RSQ=0.9636;ERATE=0.0003;THETA=0.0010;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 2827081 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.691;LDAF=0.0034;AVGPOST=0.9963;RSQ=0.5278;ERATE=0.0011;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2827213 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.719;LDAF=0.0092;AVGPOST=0.9940;RSQ=0.7080;ERATE=0.0008;THETA=0.0013;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 2827223 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.737;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.3878;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2827314 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.946;LDAF=0.0231;AVGPOST=0.9968;RSQ=0.9379;ERATE=0.0008;THETA=0.0010;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 2827350 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.4327;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2827351 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.670;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5170;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2827404 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0036;AVGPOST=0.9996;RSQ=0.9548;ERATE=0.0003;THETA=0.0015;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2827471 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.805;LDAF=0.0050;AVGPOST=0.9965;RSQ=0.7112;ERATE=0.0006;THETA=0.0011;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2827518 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.720;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6737;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2827574 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.0080;AVGPOST=0.9936;RSQ=0.6456;ERATE=0.0007;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2827666 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.738;LDAF=0.0044;AVGPOST=0.9965;RSQ=0.6778;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2827682 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0033;AVGPOST=0.9962;RSQ=0.5734;ERATE=0.0011;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2827787 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0031;AVGPOST=0.9963;RSQ=0.5690;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2827820 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0071;AVGPOST=0.9984;RSQ=0.8958;ERATE=0.0005;THETA=0.0008;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2827829 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.5879;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2827866 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.986;LDAF=0.0449;AVGPOST=0.9965;RSQ=0.9728;ERATE=0.0005;THETA=0.0047;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 2827896 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0056;AVGPOST=0.9966;RSQ=0.7878;ERATE=0.0006;THETA=0.0010;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2827924 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.918;LDAF=0.0094;AVGPOST=0.9970;RSQ=0.8693;ERATE=0.0007;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 2827931 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.440;LDAF=0.0063;AVGPOST=0.9911;RSQ=0.3963;ERATE=0.0010;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2827947 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.987;LDAF=0.0534;AVGPOST=0.9963;RSQ=0.9734;ERATE=0.0006;THETA=0.0006;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 2827974 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.598;LDAF=0.0031;AVGPOST=0.9963;RSQ=0.5010;ERATE=0.0007;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2827975 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0080;AVGPOST=0.9954;RSQ=0.7732;ERATE=0.0011;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2827990 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0030;AVGPOST=0.9976;RSQ=0.6970;ERATE=0.0004;THETA=0.0054;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2827991 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0069;AVGPOST=0.9968;RSQ=0.8154;ERATE=0.0006;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2828016 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.953;LDAF=0.0197;AVGPOST=0.9922;RSQ=0.8496;ERATE=0.0008;THETA=0.0011;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 2828045 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.747;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.3934;ERATE=0.0009;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2828178 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0024;AVGPOST=0.9962;RSQ=0.3672;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2828211 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.547;LDAF=0.0053;AVGPOST=0.9935;RSQ=0.4906;ERATE=0.0012;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2828236 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.936;LDAF=0.0287;AVGPOST=0.9968;RSQ=0.9634;ERATE=0.0005;THETA=0.0008;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 2828242 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.809;LDAF=0.0074;AVGPOST=0.9947;RSQ=0.7190;ERATE=0.0005;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2828284 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.908;LDAF=0.0145;AVGPOST=0.9937;RSQ=0.8267;ERATE=0.0008;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 2828286 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.921;LDAF=0.0468;AVGPOST=0.9929;RSQ=0.9466;ERATE=0.0007;THETA=0.0032;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 2828293 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0085;AVGPOST=0.9957;RSQ=0.8009;ERATE=0.0009;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2828328 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.973;LDAF=0.0493;AVGPOST=0.9973;RSQ=0.9792;ERATE=0.0005;THETA=0.0014;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 2828382 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.675;LDAF=0.0048;AVGPOST=0.9964;RSQ=0.6873;ERATE=0.0008;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2828386 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.950;LDAF=0.3135;AVGPOST=0.9537;RSQ=0.9193;ERATE=0.0066;THETA=0.0015;AC=668;AN=2184 GT:DS:GL:BD 0.30586082 0
1 2828438 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.947;LDAF=0.2647;AVGPOST=0.9687;RSQ=0.9394;ERATE=0.0037;THETA=0.0007;AC=572;AN=2184 GT:DS:GL:BD 0.26190478 0
1 2828471 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.844;LDAF=0.0816;AVGPOST=0.9679;RSQ=0.8563;ERATE=0.0042;THETA=0.0051;AC=165;AN=2184 GT:DS:GL:BD 0.07554945 0
1 2828479 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.983;LDAF=0.0450;AVGPOST=0.9970;RSQ=0.9787;ERATE=0.0004;THETA=0.0029;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 2828523 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0299;AVGPOST=0.9977;RSQ=0.9701;ERATE=0.0004;THETA=0.0029;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 2828528 . CTG C 134 PASS INDEL;BAVGPOST=0.996;BRSQ=0.718;LDAF=0.0109;AVGPOST=0.9867;RSQ=0.5233;ERATE=0.0021;THETA=0.0009;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2828672 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0035;AVGPOST=0.9978;RSQ=0.7944;ERATE=0.0004;THETA=0.0023;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2828699 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.950;LDAF=0.0066;AVGPOST=0.9976;RSQ=0.8577;ERATE=0.0005;THETA=0.0012;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2828730 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0013;AVGPOST=0.9978;RSQ=0.3339;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2828803 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0076;AVGPOST=0.9977;RSQ=0.8894;ERATE=0.0004;THETA=0.0008;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 2828820 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1029;AVGPOST=0.9969;RSQ=0.9892;ERATE=0.0004;THETA=0.0015;AC=225;AN=2184 GT:DS:GL:BD 0.10302198 0
1 2828845 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1021;AVGPOST=0.9972;RSQ=0.9899;ERATE=0.0003;THETA=0.0008;AC=223;AN=2184 GT:DS:GL:BD 0.10210623 0
1 2829091 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0083;AVGPOST=0.9979;RSQ=0.8898;ERATE=0.0004;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2829146 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2829259 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.714;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6639;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2829277 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0022;AVGPOST=0.9967;RSQ=0.3984;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2829331 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0130;AVGPOST=0.9996;RSQ=0.9866;ERATE=0.0003;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 2829350 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7340;ERATE=0.0005;THETA=0.0031;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2829355 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0030;AVGPOST=0.9976;RSQ=0.6921;ERATE=0.0004;THETA=0.0032;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2829387 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.939;LDAF=0.0549;AVGPOST=0.9918;RSQ=0.9450;ERATE=0.0020;THETA=0.0048;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 2829504 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2829505 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6384;ERATE=0.0004;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2829510 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6204;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2829514 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0063;AVGPOST=0.9994;RSQ=0.9553;ERATE=0.0003;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2829551 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3590;AVGPOST=0.9955;RSQ=0.9921;ERATE=0.0006;THETA=0.0009;AC=785;AN=2184 GT:DS:GL:BD 0.35943222 0
1 2829682 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9808;ERATE=0.0003;THETA=0.0017;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2829713 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4912;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2829736 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.483;LDAF=0.0026;AVGPOST=0.9969;RSQ=0.4750;ERATE=0.0008;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2829802 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0144;AVGPOST=0.9956;RSQ=0.8915;ERATE=0.0004;THETA=0.0011;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 2829803 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.5677;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2829842 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.793;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.7894;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2829862 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2668;AVGPOST=0.9966;RSQ=0.9927;ERATE=0.0004;THETA=0.0008;AC=582;AN=2184 GT:DS:GL:BD 0.26648352 0
1 2829922 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3739;AVGPOST=0.9969;RSQ=0.9950;ERATE=0.0004;THETA=0.0004;AC=818;AN=2184 GT:DS:GL:BD 0.37454212 0
1 2829923 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.851;LDAF=0.0059;AVGPOST=0.9971;RSQ=0.7872;ERATE=0.0008;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2829976 . A AG 147 PASS INDEL;BAVGPOST=0.998;BRSQ=0.669;LDAF=0.0047;AVGPOST=0.9940;RSQ=0.4221;ERATE=0.0010;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2830037 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0024;AVGPOST=0.9992;RSQ=0.8560;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2830150 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.836;LDAF=0.0076;AVGPOST=0.9978;RSQ=0.8701;ERATE=0.0004;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 2830171 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.8216;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2830347 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0098;AVGPOST=0.9991;RSQ=0.9576;ERATE=0.0004;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 2830482 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0135;AVGPOST=0.9994;RSQ=0.9814;ERATE=0.0004;THETA=0.0012;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2830758 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0030;AVGPOST=0.9991;RSQ=0.8932;ERATE=0.0003;THETA=0.0047;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2830798 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2830824 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5771;ERATE=0.0005;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2830826 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0234;AVGPOST=0.9979;RSQ=0.9660;ERATE=0.0004;THETA=0.0003;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 2830864 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.781;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.5319;ERATE=0.0006;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2830969 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.810;LDAF=0.0053;AVGPOST=0.9966;RSQ=0.7423;ERATE=0.0006;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2830977 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0092;AVGPOST=0.9963;RSQ=0.8625;ERATE=0.0005;THETA=0.0008;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2831038 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0063;AVGPOST=0.9980;RSQ=0.8843;ERATE=0.0004;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2831063 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0248;AVGPOST=0.9972;RSQ=0.9565;ERATE=0.0005;THETA=0.0009;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 2831089 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2831091 . GAGCCCCCTGTCCT G 469 PASS INDEL;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0018;AVGPOST=0.9974;RSQ=0.4285;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2831098 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.795;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4354;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2831103 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0219;AVGPOST=0.9994;RSQ=0.9874;ERATE=0.0005;THETA=0.0010;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 2831144 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0025;AVGPOST=0.9989;RSQ=0.8400;ERATE=0.0004;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2831286 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0221;AVGPOST=0.9997;RSQ=0.9942;ERATE=0.0003;THETA=0.0005;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 2831369 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3947;AVGPOST=0.9982;RSQ=0.9970;ERATE=0.0004;THETA=0.0007;AC=864;AN=2184 GT:DS:GL:BD 0.39560440 0
1 2831386 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2831431 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.8941;ERATE=0.0005;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2831488 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.0070;AVGPOST=0.9974;RSQ=0.8426;ERATE=0.0005;THETA=0.0009;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2831544 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6008;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2831575 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7108;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2831576 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.783;LDAF=0.0048;AVGPOST=0.9981;RSQ=0.8214;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2831588 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.3304;AVGPOST=0.9928;RSQ=0.9869;ERATE=0.0014;THETA=0.0007;AC=723;AN=2184 GT:DS:GL:BD 0.33104396 0
1 2831640 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0046;AVGPOST=0.9972;RSQ=0.7502;ERATE=0.0005;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2831673 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2831736 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.678;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7490;ERATE=0.0003;THETA=0.0027;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2831790 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3279;AVGPOST=0.9992;RSQ=0.9983;ERATE=0.0004;THETA=0.0006;AC=718;AN=2184 GT:DS:GL:BD 0.32875457 0
1 2831823 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.775;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6846;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2832006 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0235;AVGPOST=0.9973;RSQ=0.9548;ERATE=0.0004;THETA=0.0005;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 2832038 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5966;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2832085 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.923;LDAF=0.0570;AVGPOST=0.9864;RSQ=0.9170;ERATE=0.0004;THETA=0.0003;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 2832101 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.630;LDAF=0.0023;AVGPOST=0.9987;RSQ=0.7730;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2832143 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0198;AVGPOST=0.9992;RSQ=0.9810;ERATE=0.0004;THETA=0.0007;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 2832202 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8837;ERATE=0.0004;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2832231 . CAT C 2965 PASS INDEL;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0152;AVGPOST=0.9985;RSQ=0.9659;ERATE=0.0003;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 2832233 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.841;LDAF=0.0086;AVGPOST=0.9947;RSQ=0.7657;ERATE=0.0011;THETA=0.0017;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2832251 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3939;AVGPOST=0.9990;RSQ=0.9984;ERATE=0.0004;THETA=0.0001;AC=862;AN=2184 GT:DS:GL:BD 0.39468864 0
1 2832345 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.770;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7764;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2832360 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5650;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2832470 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2832737 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0412;AVGPOST=0.9995;RSQ=0.9952;ERATE=0.0003;THETA=0.0003;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 2832768 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3267;AVGPOST=0.9988;RSQ=0.9978;ERATE=0.0004;THETA=0.0005;AC=715;AN=2184 GT:DS:GL:BD 0.32738096 0
1 2832772 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2832957 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.915;LDAF=0.0137;AVGPOST=0.9949;RSQ=0.8557;ERATE=0.0006;THETA=0.0009;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 2832980 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8540;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2833036 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0194;AVGPOST=0.9995;RSQ=0.9862;ERATE=0.0004;THETA=0.0005;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 2833045 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.641;LDAF=0.0200;AVGPOST=0.9792;RSQ=0.5949;ERATE=0.0092;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2833065 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0079;AVGPOST=0.9992;RSQ=0.9527;ERATE=0.0004;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2833108 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0297;AVGPOST=0.9990;RSQ=0.9879;ERATE=0.0003;THETA=0.0004;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 2833160 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3191;AVGPOST=0.9945;RSQ=0.9894;ERATE=0.0011;THETA=0.0006;AC=696;AN=2184 GT:DS:GL:BD 0.31868133 0
1 2833258 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0220;AVGPOST=0.9989;RSQ=0.9785;ERATE=0.0004;THETA=0.0005;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 2833294 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2635;AVGPOST=0.9951;RSQ=0.9900;ERATE=0.0008;THETA=0.0010;AC=575;AN=2184 GT:DS:GL:BD 0.26327839 0
1 2833328 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0060;AVGPOST=0.9972;RSQ=0.8436;ERATE=0.0004;THETA=0.0010;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2833332 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2733;AVGPOST=0.9983;RSQ=0.9960;ERATE=0.0006;THETA=0.0004;AC=598;AN=2184 GT:DS:GL:BD 0.27380952 0
1 2833427 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4321;AVGPOST=0.9965;RSQ=0.9953;ERATE=0.0006;THETA=0.0005;AC=946;AN=2184 GT:DS:GL:BD 0.43315017 0
1 2833443 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.639;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.5640;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2833450 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3934;AVGPOST=0.9980;RSQ=0.9970;ERATE=0.0005;THETA=0.0005;AC=861;AN=2184 GT:DS:GL:BD 0.39423078 0
1 2833552 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.896;LDAF=0.0040;AVGPOST=0.9975;RSQ=0.7480;ERATE=0.0005;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2833611 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0266;AVGPOST=0.9978;RSQ=0.9702;ERATE=0.0005;THETA=0.0002;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 2833645 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0030;AVGPOST=0.9985;RSQ=0.7810;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2833653 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2749;AVGPOST=0.9956;RSQ=0.9915;ERATE=0.0007;THETA=0.0004;AC=600;AN=2184 GT:DS:GL:BD 0.27472529 0
1 2833743 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4253;AVGPOST=0.9980;RSQ=0.9972;ERATE=0.0004;THETA=0.0004;AC=931;AN=2184 GT:DS:GL:BD 0.42628205 0
1 2833744 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.953;LDAF=0.0213;AVGPOST=0.9991;RSQ=0.9858;ERATE=0.0004;THETA=0.0005;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 2833768 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.789;LDAF=0.0022;AVGPOST=0.9985;RSQ=0.6941;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2833773 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0414;AVGPOST=0.9994;RSQ=0.9935;ERATE=0.0004;THETA=0.0032;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 2833957 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0054;AVGPOST=0.9992;RSQ=0.9550;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2833975 . GAC G 23 PASS INDEL;BAVGPOST=1.000;BRSQ=0.738;LDAF=0.0012;AVGPOST=0.9983;RSQ=0.3614;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2834000 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0018;AVGPOST=0.9993;RSQ=0.8867;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2834010 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2719;AVGPOST=0.9957;RSQ=0.9923;ERATE=0.0004;THETA=0.0008;AC=598;AN=2184 GT:DS:GL:BD 0.27380952 0
1 2834019 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6432;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2834025 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.3681;AVGPOST=0.9916;RSQ=0.9872;ERATE=0.0009;THETA=0.0007;AC=808;AN=2184 GT:DS:GL:BD 0.36996338 0
1 2834199 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2834240 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0022;AVGPOST=0.9991;RSQ=0.8278;ERATE=0.0004;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2834288 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.0055;AVGPOST=0.9975;RSQ=0.8341;ERATE=0.0005;THETA=0.0038;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2834300 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8596;ERATE=0.0004;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2834301 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.763;LDAF=0.0010;AVGPOST=0.9986;RSQ=0.4043;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2834325 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2834383 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5715;ERATE=0.0003;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2834408 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8096;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2834425 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.850;LDAF=0.0020;AVGPOST=0.9986;RSQ=0.7342;ERATE=0.0005;THETA=0.0029;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2834438 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6804;ERATE=0.0007;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2834456 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5291;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2834736 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0189;AVGPOST=0.9965;RSQ=0.9194;ERATE=0.0005;THETA=0.0013;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 2834750 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.913;LDAF=0.0089;AVGPOST=0.9972;RSQ=0.8610;ERATE=0.0006;THETA=0.0046;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2834870 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.744;LDAF=0.0041;AVGPOST=0.9966;RSQ=0.6381;ERATE=0.0004;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2834921 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.9048;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2834948 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.7764;ERATE=0.0006;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2834960 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2834986 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.711;LDAF=0.0016;AVGPOST=0.9988;RSQ=0.7406;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2834994 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0200;AVGPOST=0.9987;RSQ=0.9703;ERATE=0.0005;THETA=0.0012;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 2835053 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0004;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2835076 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0365;AVGPOST=0.9985;RSQ=0.9825;ERATE=0.0005;THETA=0.0111;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 2835106 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.968;LDAF=0.0126;AVGPOST=0.9973;RSQ=0.9142;ERATE=0.0005;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 2835113 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.547;LDAF=0.0030;AVGPOST=0.9980;RSQ=0.7067;ERATE=0.0008;THETA=0.0036;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2835119 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.695;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.5840;ERATE=0.0005;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2835238 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.635;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4074;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2835243 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.676;LDAF=0.0049;AVGPOST=0.9946;RSQ=0.6088;ERATE=0.0007;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2835259 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4957;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2835288 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.8392;ERATE=0.0005;THETA=0.0035;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2835349 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.5032;ERATE=0.0004;THETA=0.0031;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2835403 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6373;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2835487 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.990;LDAF=0.4285;AVGPOST=0.9827;RSQ=0.9775;ERATE=0.0016;THETA=0.0033;AC=941;AN=2184 GT:DS:GL:BD 0.43086082 0
1 2835663 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0043;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2835692 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.965;LDAF=0.4542;AVGPOST=0.9685;RSQ=0.9606;ERATE=0.0087;THETA=0.0025;AC=992;AN=2184 GT:DS:GL:BD 0.45421246 0
1 2835729 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7089;ERATE=0.0004;THETA=0.0030;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2835823 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.677;LDAF=0.0016;AVGPOST=0.9976;RSQ=0.3766;ERATE=0.0007;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2835835 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0063;AVGPOST=0.9965;RSQ=0.7779;ERATE=0.0007;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2835861 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0139;AVGPOST=0.9965;RSQ=0.9059;ERATE=0.0004;THETA=0.0015;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 2835882 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.683;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.5459;ERATE=0.0004;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2835909 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.992;LDAF=0.4340;AVGPOST=0.9903;RSQ=0.9869;ERATE=0.0010;THETA=0.0059;AC=949;AN=2184 GT:DS:GL:BD 0.43452382 0
1 2836018 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.941;LDAF=0.0500;AVGPOST=0.9931;RSQ=0.9411;ERATE=0.0015;THETA=0.0052;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 2836032 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0657;AVGPOST=0.9947;RSQ=0.9715;ERATE=0.0004;THETA=0.0018;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 2836099 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.976;LDAF=0.1825;AVGPOST=0.9872;RSQ=0.9677;ERATE=0.0012;THETA=0.0005;AC=392;AN=2184 GT:DS:GL:BD 0.17948718 0
1 2836101 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0027;AVGPOST=0.9993;RSQ=0.8717;ERATE=0.0004;THETA=0.0024;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2836152 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0048;AVGPOST=0.9987;RSQ=0.8944;ERATE=0.0003;THETA=0.0028;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2836191 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.732;LDAF=0.0044;AVGPOST=0.9968;RSQ=0.7325;ERATE=0.0005;THETA=0.0040;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2836255 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0125;AVGPOST=0.9984;RSQ=0.9391;ERATE=0.0006;THETA=0.0042;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 2836279 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0102;AVGPOST=0.9989;RSQ=0.9540;ERATE=0.0004;THETA=0.0020;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 2836313 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.776;LDAF=0.0045;AVGPOST=0.9967;RSQ=0.7020;ERATE=0.0005;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2836318 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0191;AVGPOST=0.9984;RSQ=0.9620;ERATE=0.0004;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 2836334 rs113065885 AAGG A 2198 PASS INDEL;BAVGPOST=0.998;BRSQ=0.947;LDAF=0.0186;AVGPOST=0.9970;RSQ=0.9390;ERATE=0.0005;THETA=0.0007;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 2836428 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0027;AVGPOST=0.9989;RSQ=0.8358;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2836454 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.709;LDAF=0.0084;AVGPOST=0.9942;RSQ=0.7457;ERATE=0.0006;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 2836503 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0079;AVGPOST=0.9954;RSQ=0.7662;ERATE=0.0007;THETA=0.0011;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 2836506 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.890;LDAF=0.0105;AVGPOST=0.9981;RSQ=0.9212;ERATE=0.0006;THETA=0.0017;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 2836507 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.753;LDAF=0.0043;AVGPOST=0.9966;RSQ=0.6575;ERATE=0.0010;THETA=0.0012;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2836509 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.946;LDAF=0.0208;AVGPOST=0.9967;RSQ=0.9344;ERATE=0.0007;THETA=0.0022;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 2836526 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.775;LDAF=0.0025;AVGPOST=0.9985;RSQ=0.7248;ERATE=0.0006;THETA=0.0070;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2836555 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.963;LDAF=0.0210;AVGPOST=0.9973;RSQ=0.9470;ERATE=0.0006;THETA=0.0012;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 2836598 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.857;LDAF=0.0178;AVGPOST=0.9958;RSQ=0.9064;ERATE=0.0007;THETA=0.0052;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 2836626 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.852;LDAF=0.0145;AVGPOST=0.9931;RSQ=0.8206;ERATE=0.0010;THETA=0.0061;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 2836643 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0026;AVGPOST=0.9958;RSQ=0.4310;ERATE=0.0006;THETA=0.0047;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2836714 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0228;AVGPOST=0.9981;RSQ=0.9681;ERATE=0.0004;THETA=0.0037;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 2836725 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6746;ERATE=0.0004;THETA=0.0039;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2836820 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.871;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7966;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2836830 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0147;AVGPOST=0.9971;RSQ=0.9185;ERATE=0.0005;THETA=0.0028;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 2836840 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.809;LDAF=0.0050;AVGPOST=0.9971;RSQ=0.8073;ERATE=0.0007;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2836902 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.971;LDAF=0.2325;AVGPOST=0.9837;RSQ=0.9681;ERATE=0.0015;THETA=0.0005;AC=509;AN=2184 GT:DS:GL:BD 0.23305860 0
1 2837053 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.976;LDAF=0.3260;AVGPOST=0.9819;RSQ=0.9694;ERATE=0.0008;THETA=0.0036;AC=715;AN=2184 GT:DS:GL:BD 0.32738096 0
1 2837056 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0193;AVGPOST=0.9985;RSQ=0.9629;ERATE=0.0005;THETA=0.0027;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 2837150 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0056;AVGPOST=0.9972;RSQ=0.8067;ERATE=0.0006;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2837275 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.1083;AVGPOST=0.9946;RSQ=0.9805;ERATE=0.0008;THETA=0.0015;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 2837309 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0036;AVGPOST=0.9985;RSQ=0.8255;ERATE=0.0005;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2837318 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0037;AVGPOST=0.9985;RSQ=0.8141;ERATE=0.0005;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2837322 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.762;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7113;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2837354 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0192;AVGPOST=0.9990;RSQ=0.9764;ERATE=0.0004;THETA=0.0007;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 2837377 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.3821;ERATE=0.0008;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2837378 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0179;AVGPOST=0.9976;RSQ=0.9454;ERATE=0.0004;THETA=0.0007;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 2837444 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.958;LDAF=0.0801;AVGPOST=0.9874;RSQ=0.9359;ERATE=0.0004;THETA=0.0038;AC=172;AN=2184 GT:DS:GL:BD 0.07875458 0
1 2837471 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.478;LDAF=0.0016;AVGPOST=0.9980;RSQ=0.5058;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2837574 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.956;LDAF=0.2299;AVGPOST=0.9904;RSQ=0.9794;ERATE=0.0005;THETA=0.0015;AC=501;AN=2184 GT:DS:GL:BD 0.22939560 0
1 2837578 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.956;LDAF=0.2285;AVGPOST=0.9926;RSQ=0.9841;ERATE=0.0004;THETA=0.0032;AC=500;AN=2184 GT:DS:GL:BD 0.22893773 0
1 2837628 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.2278;AVGPOST=0.9921;RSQ=0.9829;ERATE=0.0005;THETA=0.0008;AC=497;AN=2184 GT:DS:GL:BD 0.22756410 0
1 2837630 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.3837;AVGPOST=0.9879;RSQ=0.9823;ERATE=0.0008;THETA=0.0004;AC=842;AN=2184 GT:DS:GL:BD 0.38553113 0
1 2837671 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.668;LDAF=0.0037;AVGPOST=0.9952;RSQ=0.4667;ERATE=0.0009;THETA=0.0018;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2837703 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.837;LDAF=0.0052;AVGPOST=0.9958;RSQ=0.6658;ERATE=0.0007;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2837711 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.960;LDAF=0.2300;AVGPOST=0.9890;RSQ=0.9784;ERATE=0.0006;THETA=0.0009;AC=500;AN=2184 GT:DS:GL:BD 0.22893773 0
1 2837721 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0558;AVGPOST=0.9958;RSQ=0.9697;ERATE=0.0007;THETA=0.0012;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 2837724 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.962;LDAF=0.3819;AVGPOST=0.9718;RSQ=0.9599;ERATE=0.0018;THETA=0.0019;AC=840;AN=2184 GT:DS:GL:BD 0.38461539 0
1 2837751 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.942;LDAF=0.2197;AVGPOST=0.9714;RSQ=0.9409;ERATE=0.0007;THETA=0.0043;AC=487;AN=2184 GT:DS:GL:BD 0.22298534 0
1 2837771 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.968;LDAF=0.2404;AVGPOST=0.9894;RSQ=0.9789;ERATE=0.0005;THETA=0.0006;AC=523;AN=2184 GT:DS:GL:BD 0.23946886 0
1 2837774 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.550;LDAF=0.0087;AVGPOST=0.9888;RSQ=0.4589;ERATE=0.0023;THETA=0.0013;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2837792 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.983;LDAF=0.2284;AVGPOST=0.9879;RSQ=0.9754;ERATE=0.0006;THETA=0.0052;AC=498;AN=2184 GT:DS:GL:BD 0.22802198 0
1 2837800 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.975;LDAF=0.3847;AVGPOST=0.9775;RSQ=0.9678;ERATE=0.0016;THETA=0.0007;AC=837;AN=2184 GT:DS:GL:BD 0.38324177 0
1 2837835 rs57146513 G GC 1301 PASS INDEL;BAVGPOST=0.942;BRSQ=0.672;LDAF=0.0886;AVGPOST=0.9592;RSQ=0.8394;ERATE=0.0007;THETA=0.0052;AC=207;AN=2184 GT:DS:GL:BD 0.09478022 0
1 2837836 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.942;BRSQ=0.870;LDAF=0.2590;AVGPOST=0.9538;RSQ=0.9211;ERATE=0.0015;THETA=0.0014;AC=553;AN=2184 GT:DS:GL:BD 0.25320512 0
1 2837842 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.953;BRSQ=0.896;LDAF=0.2562;AVGPOST=0.9596;RSQ=0.9300;ERATE=0.0011;THETA=0.0008;AC=548;AN=2184 GT:DS:GL:BD 0.25091577 0
1 2837850 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.958;BRSQ=0.903;LDAF=0.2513;AVGPOST=0.9616;RSQ=0.9334;ERATE=0.0009;THETA=0.0074;AC=541;AN=2184 GT:DS:GL:BD 0.24771062 0
1 2837923 . C CT 7033 PASS INDEL;BAVGPOST=0.966;BRSQ=0.928;LDAF=0.2288;AVGPOST=0.9768;RSQ=0.9506;ERATE=0.0029;THETA=0.0029;AC=494;AN=2184 GT:DS:GL:BD 0.22619048 0
1 2837924 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.933;LDAF=0.2294;AVGPOST=0.9890;RSQ=0.9773;ERATE=0.0004;THETA=0.0004;AC=500;AN=2184 GT:DS:GL:BD 0.22893773 0
1 2837925 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.933;LDAF=0.2297;AVGPOST=0.9888;RSQ=0.9768;ERATE=0.0005;THETA=0.0013;AC=500;AN=2184 GT:DS:GL:BD 0.22893773 0
1 2837946 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.686;LDAF=0.0052;AVGPOST=0.9944;RSQ=0.5625;ERATE=0.0015;THETA=0.0026;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2837962 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.2201;AVGPOST=0.9943;RSQ=0.9875;ERATE=0.0007;THETA=0.0006;AC=480;AN=2184 GT:DS:GL:BD 0.21978022 0
1 2837966 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0029;AVGPOST=0.9951;RSQ=0.3153;ERATE=0.0008;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2837997 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.969;LDAF=0.2301;AVGPOST=0.9912;RSQ=0.9807;ERATE=0.0010;THETA=0.0008;AC=502;AN=2184 GT:DS:GL:BD 0.22985348 0
1 2838099 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.379;LDAF=0.0086;AVGPOST=0.9866;RSQ=0.3448;ERATE=0.0014;THETA=0.0014;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2838513 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.828;BRSQ=0.558;LDAF=0.2575;AVGPOST=0.8038;RSQ=0.5931;ERATE=0.0279;THETA=0.0012;AC=514;AN=2184 GT:DS:GL:BD 0.23534799 0
1 2838527 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.944;LDAF=0.0280;AVGPOST=0.9963;RSQ=0.9430;ERATE=0.0005;THETA=0.0006;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 2838635 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0157;AVGPOST=0.9992;RSQ=0.9763;ERATE=0.0005;THETA=0.0042;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 2838706 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.981;LDAF=0.3408;AVGPOST=0.9883;RSQ=0.9816;ERATE=0.0008;THETA=0.0012;AC=746;AN=2184 GT:DS:GL:BD 0.34157509 0
1 2838712 . G GC 10079 PASS INDEL;BAVGPOST=0.991;BRSQ=0.984;LDAF=0.4665;AVGPOST=0.9864;RSQ=0.9816;ERATE=0.0006;THETA=0.0004;AC=1019;AN=2184 GT:DS:GL:BD 0.46657509 0
1 2838716 rs76875704 C CT 28402 PASS INDEL;BAVGPOST=0.990;BRSQ=0.984;LDAF=0.4658;AVGPOST=0.9808;RSQ=0.9735;ERATE=0.0013;THETA=0.0004;AC=1017;AN=2184 GT:DS:GL:BD 0.46565935 0
1 2838763 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.722;LDAF=0.0024;AVGPOST=0.9962;RSQ=0.3411;ERATE=0.0009;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2838798 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.4538;AVGPOST=0.9683;RSQ=0.9545;ERATE=0.0036;THETA=0.0003;AC=996;AN=2184 GT:DS:GL:BD 0.45604396 0
1 2838924 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5316;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2838957 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.862;LDAF=0.0092;AVGPOST=0.9987;RSQ=0.9400;ERATE=0.0004;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 2839008 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3491;AVGPOST=0.9967;RSQ=0.9940;ERATE=0.0006;THETA=0.0028;AC=763;AN=2184 GT:DS:GL:BD 0.34935898 0
1 2839015 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.9005;ERATE=0.0003;THETA=0.0019;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2839105 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7477;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2839179 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0042;AVGPOST=0.9993;RSQ=0.9208;ERATE=0.0003;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2839180 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0037;AVGPOST=0.9991;RSQ=0.8987;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2839336 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.596;LDAF=0.0017;AVGPOST=0.9978;RSQ=0.4715;ERATE=0.0004;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2839464 . T TG 7024 PASS INDEL;BAVGPOST=0.991;BRSQ=0.954;LDAF=0.0975;AVGPOST=0.9884;RSQ=0.9570;ERATE=0.0006;THETA=0.0004;AC=214;AN=2184 GT:DS:GL:BD 0.09798535 0
1 2839465 . GA G 11357 PASS INDEL;BAVGPOST=0.991;BRSQ=0.955;LDAF=0.0985;AVGPOST=0.9900;RSQ=0.9651;ERATE=0.0003;THETA=0.0003;AC=219;AN=2184 GT:DS:GL:BD 0.10027473 0
1 2839467 . GA G 8 PASS INDEL;BAVGPOST=0.994;BRSQ=0.539;LDAF=0.0031;AVGPOST=0.9968;RSQ=0.6369;ERATE=0.0007;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2839470 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.926;LDAF=0.0984;AVGPOST=0.9875;RSQ=0.9548;ERATE=0.0004;THETA=0.0005;AC=219;AN=2184 GT:DS:GL:BD 0.10027473 0
1 2839505 rs35758696 TA T 25451 PASS INDEL;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.4528;AVGPOST=0.9962;RSQ=0.9940;ERATE=0.0007;THETA=0.0006;AC=990;AN=2184 GT:DS:GL:BD 0.45329669 0
1 2839511 . AC A 344 PASS INDEL;BAVGPOST=0.765;BRSQ=0.339;LDAF=0.2239;AVGPOST=0.7291;RSQ=0.3672;ERATE=0.0213;THETA=0.0006;AC=300;AN=2184 GT:DS:GL:BD 0.13736264 0
1 2839524 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0028;AVGPOST=0.9976;RSQ=0.6869;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2839566 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.768;LDAF=0.0024;AVGPOST=0.9976;RSQ=0.6630;ERATE=0.0006;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2839664 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.772;LDAF=0.0084;AVGPOST=0.9955;RSQ=0.7808;ERATE=0.0005;THETA=0.0009;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2839691 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.6547;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2839699 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0195;AVGPOST=0.9984;RSQ=0.9635;ERATE=0.0004;THETA=0.0011;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 2839757 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.4500;AVGPOST=0.9962;RSQ=0.9940;ERATE=0.0005;THETA=0.0006;AC=984;AN=2184 GT:DS:GL:BD 0.45054945 0
1 2839761 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.4498;AVGPOST=0.9957;RSQ=0.9936;ERATE=0.0004;THETA=0.0011;AC=984;AN=2184 GT:DS:GL:BD 0.45054945 0
1 2839788 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.843;LDAF=0.0263;AVGPOST=0.9940;RSQ=0.9114;ERATE=0.0005;THETA=0.0020;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 2839808 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0187;AVGPOST=0.9994;RSQ=0.9862;ERATE=0.0003;THETA=0.0013;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 2839825 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3416;AVGPOST=0.9974;RSQ=0.9954;ERATE=0.0004;THETA=0.0007;AC=746;AN=2184 GT:DS:GL:BD 0.34157509 0
1 2839833 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0153;AVGPOST=0.9995;RSQ=0.9828;ERATE=0.0003;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 2839989 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0069;AVGPOST=1.0000;RSQ=0.9968;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 2839989 . CA C 345 PASS INDEL;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7540;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2840016 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.553;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.7479;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2840028 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0182;AVGPOST=0.9982;RSQ=0.9641;ERATE=0.0004;THETA=0.0005;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 2840031 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.654;LDAF=0.0029;AVGPOST=0.9964;RSQ=0.5865;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2840053 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0083;AVGPOST=0.9973;RSQ=0.8605;ERATE=0.0006;THETA=0.0023;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2840089 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.565;LDAF=0.0074;AVGPOST=0.9936;RSQ=0.6605;ERATE=0.0005;THETA=0.0012;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2840119 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.730;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.5216;ERATE=0.0004;THETA=0.0024;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2840197 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0073;AVGPOST=0.9947;RSQ=0.7139;ERATE=0.0005;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2840264 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.623;LDAF=0.0020;AVGPOST=0.9969;RSQ=0.3759;ERATE=0.0006;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2840290 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.784;LDAF=0.0086;AVGPOST=0.9959;RSQ=0.7978;ERATE=0.0005;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2840352 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.978;LDAF=0.3434;AVGPOST=0.9949;RSQ=0.9912;ERATE=0.0006;THETA=0.0004;AC=750;AN=2184 GT:DS:GL:BD 0.34340659 0
1 2840365 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.976;LDAF=0.3425;AVGPOST=0.9938;RSQ=0.9902;ERATE=0.0006;THETA=0.0006;AC=748;AN=2184 GT:DS:GL:BD 0.34249085 0
1 2840424 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.794;LDAF=0.0026;AVGPOST=0.9974;RSQ=0.5923;ERATE=0.0007;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2840446 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0045;AVGPOST=0.9990;RSQ=0.8965;ERATE=0.0005;THETA=0.0018;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2840610 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3445;AVGPOST=0.9967;RSQ=0.9944;ERATE=0.0005;THETA=0.0040;AC=752;AN=2184 GT:DS:GL:BD 0.34432235 0
1 2840700 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0152;AVGPOST=0.9981;RSQ=0.9408;ERATE=0.0005;THETA=0.0010;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 2840701 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4652;AVGPOST=0.9906;RSQ=0.9874;ERATE=0.0013;THETA=0.0009;AC=1019;AN=2184 GT:DS:GL:BD 0.46657509 0
1 2840743 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0039;AVGPOST=0.9978;RSQ=0.7767;ERATE=0.0004;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2840764 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.689;LDAF=0.0048;AVGPOST=0.9957;RSQ=0.6456;ERATE=0.0004;THETA=0.0012;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2840836 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.8848;ERATE=0.0004;THETA=0.0027;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2840887 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.979;LDAF=0.3108;AVGPOST=0.9932;RSQ=0.9880;ERATE=0.0008;THETA=0.0004;AC=682;AN=2184 GT:DS:GL:BD 0.31227106 0
1 2840913 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.973;LDAF=0.3082;AVGPOST=0.9902;RSQ=0.9832;ERATE=0.0005;THETA=0.0009;AC=679;AN=2184 GT:DS:GL:BD 0.31089744 0
1 2840925 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.976;LDAF=0.4548;AVGPOST=0.9949;RSQ=0.9927;ERATE=0.0005;THETA=0.0005;AC=996;AN=2184 GT:DS:GL:BD 0.45604396 0
1 2840943 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0190;AVGPOST=0.9994;RSQ=0.9854;ERATE=0.0003;THETA=0.0024;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 2840969 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0029;AVGPOST=0.9985;RSQ=0.7789;ERATE=0.0004;THETA=0.0014;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2840970 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.0062;AVGPOST=0.9994;RSQ=0.9566;ERATE=0.0004;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2840984 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0035;AVGPOST=0.9989;RSQ=0.8582;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2841110 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4428;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2841178 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.783;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8269;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2841191 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4542;AVGPOST=0.9975;RSQ=0.9963;ERATE=0.0006;THETA=0.0005;AC=992;AN=2184 GT:DS:GL:BD 0.45421246 0
1 2841206 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.958;LDAF=0.0272;AVGPOST=0.9965;RSQ=0.9440;ERATE=0.0005;THETA=0.0007;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 2841256 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7296;ERATE=0.0004;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2841307 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2841319 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0129;AVGPOST=0.9996;RSQ=0.9866;ERATE=0.0003;THETA=0.0011;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 2841331 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.975;LDAF=0.4512;AVGPOST=0.9919;RSQ=0.9883;ERATE=0.0011;THETA=0.0005;AC=992;AN=2184 GT:DS:GL:BD 0.45421246 0
1 2841342 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.877;LDAF=0.0096;AVGPOST=0.9989;RSQ=0.9493;ERATE=0.0004;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 2841450 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.765;LDAF=0.0058;AVGPOST=0.9970;RSQ=0.7986;ERATE=0.0006;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2841457 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.983;LDAF=0.4537;AVGPOST=0.9937;RSQ=0.9903;ERATE=0.0015;THETA=0.0006;AC=994;AN=2184 GT:DS:GL:BD 0.45512819 0
1 2841485 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0189;AVGPOST=0.9991;RSQ=0.9790;ERATE=0.0004;THETA=0.0006;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 2841501 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0085;AVGPOST=0.9986;RSQ=0.9220;ERATE=0.0005;THETA=0.0031;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2841562 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0056;AVGPOST=0.9971;RSQ=0.7715;ERATE=0.0007;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2841713 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.961;LDAF=0.4087;AVGPOST=0.9822;RSQ=0.9748;ERATE=0.0006;THETA=0.0004;AC=893;AN=2184 GT:DS:GL:BD 0.40888280 0
1 2841714 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.961;LDAF=0.4081;AVGPOST=0.9849;RSQ=0.9783;ERATE=0.0005;THETA=0.0004;AC=894;AN=2184 GT:DS:GL:BD 0.40934065 0
1 2841728 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6758;ERATE=0.0004;THETA=0.0037;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2841753 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.712;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6300;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2841842 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9369;ERATE=0.0004;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2841880 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4502;AVGPOST=0.9966;RSQ=0.9946;ERATE=0.0007;THETA=0.0010;AC=985;AN=2184 GT:DS:GL:BD 0.45100734 0
1 2841995 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.4463;AVGPOST=0.9960;RSQ=0.9943;ERATE=0.0005;THETA=0.0003;AC=975;AN=2184 GT:DS:GL:BD 0.44642857 0
1 2842231 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0056;AVGPOST=0.9964;RSQ=0.7618;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2842270 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4242;AVGPOST=0.9952;RSQ=0.9925;ERATE=0.0009;THETA=0.0005;AC=926;AN=2184 GT:DS:GL:BD 0.42399266 0
1 2842307 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7148;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2842319 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4026;AVGPOST=0.9952;RSQ=0.9923;ERATE=0.0006;THETA=0.0014;AC=881;AN=2184 GT:DS:GL:BD 0.40338829 0
1 2842395 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0193;AVGPOST=0.9989;RSQ=0.9712;ERATE=0.0005;THETA=0.0033;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 2842482 . TC T 8300 PASS INDEL;BAVGPOST=0.972;BRSQ=0.953;LDAF=0.4429;AVGPOST=0.9844;RSQ=0.9780;ERATE=0.0019;THETA=0.0041;AC=971;AN=2184 GT:DS:GL:BD 0.44459707 0
1 2842483 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.952;LDAF=0.4452;AVGPOST=0.9910;RSQ=0.9873;ERATE=0.0007;THETA=0.0007;AC=975;AN=2184 GT:DS:GL:BD 0.44642857 0
1 2842502 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.712;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6181;ERATE=0.0005;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2842530 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.634;LDAF=0.0025;AVGPOST=0.9969;RSQ=0.4916;ERATE=0.0006;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2842569 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0082;AVGPOST=0.9979;RSQ=0.8809;ERATE=0.0006;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2842669 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.668;LDAF=0.0039;AVGPOST=0.9959;RSQ=0.6126;ERATE=0.0005;THETA=0.0029;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2842674 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.473;LDAF=0.0028;AVGPOST=0.9967;RSQ=0.5627;ERATE=0.0006;THETA=0.0034;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2842704 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.428;LDAF=0.0037;AVGPOST=0.9947;RSQ=0.4254;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2842747 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.981;LDAF=0.4433;AVGPOST=0.9836;RSQ=0.9770;ERATE=0.0010;THETA=0.0004;AC=971;AN=2184 GT:DS:GL:BD 0.44459707 0
1 2842771 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5320;ERATE=0.0003;THETA=0.0037;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2842792 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0046;AVGPOST=0.9988;RSQ=0.9106;ERATE=0.0004;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2843005 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0192;AVGPOST=0.9995;RSQ=0.9876;ERATE=0.0003;THETA=0.0015;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 2843064 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.979;LDAF=0.4396;AVGPOST=0.9866;RSQ=0.9814;ERATE=0.0009;THETA=0.0051;AC=965;AN=2184 GT:DS:GL:BD 0.44184983 0
1 2843096 . GGCTGT G 51 PASS INDEL;BAVGPOST=0.999;BRSQ=0.591;LDAF=0.0049;AVGPOST=0.9936;RSQ=0.4362;ERATE=0.0009;THETA=0.0019;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2843177 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9137;ERATE=0.0004;THETA=0.0020;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2843180 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.970;LDAF=0.3746;AVGPOST=0.9755;RSQ=0.9617;ERATE=0.0039;THETA=0.0028;AC=820;AN=2184 GT:DS:GL:BD 0.37545788 0
1 2843222 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.940;LDAF=0.4187;AVGPOST=0.9287;RSQ=0.8869;ERATE=0.0248;THETA=0.0046;AC=902;AN=2184 GT:DS:GL:BD 0.41300365 0
1 2843228 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.698;LDAF=0.0349;AVGPOST=0.9693;RSQ=0.6344;ERATE=0.0122;THETA=0.0008;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 2843287 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.927;BRSQ=0.578;LDAF=0.1380;AVGPOST=0.8699;RSQ=0.5215;ERATE=0.0563;THETA=0.0074;AC=196;AN=2184 GT:DS:GL:BD 0.08974359 0
1 2843354 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.896;BRSQ=0.722;LDAF=0.2155;AVGPOST=0.8902;RSQ=0.7500;ERATE=0.0234;THETA=0.0004;AC=446;AN=2184 GT:DS:GL:BD 0.20421246 0
1 2843377 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.943;BRSQ=0.876;LDAF=0.2999;AVGPOST=0.9200;RSQ=0.8603;ERATE=0.0133;THETA=0.0005;AC=660;AN=2184 GT:DS:GL:BD 0.30219781 0
1 2843381 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.939;BRSQ=0.877;LDAF=0.3244;AVGPOST=0.9387;RSQ=0.9000;ERATE=0.0032;THETA=0.0006;AC=707;AN=2184 GT:DS:GL:BD 0.32371795 0
1 2843428 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.960;BRSQ=0.926;LDAF=0.3669;AVGPOST=0.9416;RSQ=0.9057;ERATE=0.0132;THETA=0.0010;AC=802;AN=2184 GT:DS:GL:BD 0.36721611 0
1 2843450 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.618;LDAF=0.0406;AVGPOST=0.9642;RSQ=0.6338;ERATE=0.0062;THETA=0.0020;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 2843477 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.958;BRSQ=0.916;LDAF=0.4647;AVGPOST=0.9163;RSQ=0.8442;ERATE=0.0516;THETA=0.0044;AC=997;AN=2184 GT:DS:GL:BD 0.45650184 0
1 2843496 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.484;LDAF=0.0121;AVGPOST=0.9840;RSQ=0.4524;ERATE=0.0068;THETA=0.0011;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2843590 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.944;LDAF=0.3603;AVGPOST=0.9220;RSQ=0.8809;ERATE=0.0199;THETA=0.0036;AC=793;AN=2184 GT:DS:GL:BD 0.36309522 0
1 2843726 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.748;LDAF=0.0620;AVGPOST=0.9527;RSQ=0.6731;ERATE=0.0141;THETA=0.0006;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 2843741 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.921;LDAF=0.0187;AVGPOST=0.9961;RSQ=0.9101;ERATE=0.0009;THETA=0.0042;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 2843761 . TGCTGGGCTGA T 460 PASS INDEL;BAVGPOST=0.997;BRSQ=0.802;LDAF=0.0148;AVGPOST=0.9797;RSQ=0.4729;ERATE=0.0022;THETA=0.0041;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2843781 . AGCTGG A 65 PASS INDEL;BAVGPOST=0.998;BRSQ=0.728;LDAF=0.0053;AVGPOST=0.9956;RSQ=0.6410;ERATE=0.0011;THETA=0.0045;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2843802 . GCTGGT G 354 PASS INDEL;BAVGPOST=0.994;BRSQ=0.467;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6177;ERATE=0.0004;THETA=0.0073;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2843850 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4465;AVGPOST=0.9968;RSQ=0.9952;ERATE=0.0007;THETA=0.0036;AC=977;AN=2184 GT:DS:GL:BD 0.44734433 0
1 2843957 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2844067 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4486;AVGPOST=0.9961;RSQ=0.9945;ERATE=0.0004;THETA=0.0014;AC=982;AN=2184 GT:DS:GL:BD 0.44963369 0
1 2844172 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9422;ERATE=0.0004;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2844173 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.765;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6252;ERATE=0.0004;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2844221 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0107;AVGPOST=0.9980;RSQ=0.9260;ERATE=0.0004;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 2844254 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4537;AVGPOST=0.9950;RSQ=0.9922;ERATE=0.0006;THETA=0.0017;AC=992;AN=2184 GT:DS:GL:BD 0.45421246 0
1 2844357 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3500;AVGPOST=0.9942;RSQ=0.9904;ERATE=0.0006;THETA=0.0007;AC=763;AN=2184 GT:DS:GL:BD 0.34935898 0
1 2844374 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4485;AVGPOST=0.9958;RSQ=0.9938;ERATE=0.0005;THETA=0.0013;AC=978;AN=2184 GT:DS:GL:BD 0.44780219 0
1 2844388 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5316;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2844401 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4054;AVGPOST=0.9963;RSQ=0.9944;ERATE=0.0006;THETA=0.0006;AC=885;AN=2184 GT:DS:GL:BD 0.40521979 0
1 2844409 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8118;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2844478 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0193;AVGPOST=0.9998;RSQ=0.9943;ERATE=0.0003;THETA=0.0008;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 2844590 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0088;AVGPOST=0.9986;RSQ=0.9434;ERATE=0.0004;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 2844655 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.560;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5809;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2844715 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0194;AVGPOST=0.9995;RSQ=0.9862;ERATE=0.0004;THETA=0.0041;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 2844726 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.595;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2844804 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0521;AVGPOST=0.9984;RSQ=0.9880;ERATE=0.0004;THETA=0.0009;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 2844815 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9385;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2844872 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0024;AVGPOST=0.9992;RSQ=0.8718;ERATE=0.0004;THETA=0.0022;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2844909 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9381;ERATE=0.0003;THETA=0.0014;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2844952 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0059;AVGPOST=0.9999;RSQ=0.9939;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2844962 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4046;AVGPOST=0.9953;RSQ=0.9930;ERATE=0.0004;THETA=0.0003;AC=882;AN=2184 GT:DS:GL:BD 0.40384614 0
1 2844974 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4005;AVGPOST=0.9955;RSQ=0.9930;ERATE=0.0005;THETA=0.0004;AC=873;AN=2184 GT:DS:GL:BD 0.39972529 0
1 2844977 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0060;AVGPOST=0.9996;RSQ=0.9718;ERATE=0.0003;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2844990 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0029;AVGPOST=0.9970;RSQ=0.5764;ERATE=0.0005;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2845165 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9981;RSQ=0.7600;ERATE=0.0004;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2845174 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.958;LDAF=0.1103;AVGPOST=0.9855;RSQ=0.9476;ERATE=0.0005;THETA=0.0002;AC=239;AN=2184 GT:DS:GL:BD 0.10943224 0
1 2845209 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.671;LDAF=0.0039;AVGPOST=0.9981;RSQ=0.7975;ERATE=0.0005;THETA=0.0013;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2845243 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0253;AVGPOST=0.9997;RSQ=0.9948;ERATE=0.0004;THETA=0.0006;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 2845266 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0081;AVGPOST=0.9985;RSQ=0.9268;ERATE=0.0004;THETA=0.0017;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2845320 . AG A 117 PASS INDEL;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7683;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2845359 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0251;AVGPOST=0.9997;RSQ=0.9947;ERATE=0.0003;THETA=0.0006;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 2845417 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.914;LDAF=0.0057;AVGPOST=0.9986;RSQ=0.9160;ERATE=0.0003;THETA=0.0011;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2845444 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2845491 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9684;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2845494 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0266;AVGPOST=0.9998;RSQ=0.9967;ERATE=0.0004;THETA=0.0006;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 2845495 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9319;ERATE=0.0003;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2845573 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0202;AVGPOST=0.9995;RSQ=0.9873;ERATE=0.0004;THETA=0.0006;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 2845583 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0188;AVGPOST=0.9989;RSQ=0.9749;ERATE=0.0004;THETA=0.0013;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 2845595 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.0035;AVGPOST=0.9986;RSQ=0.8103;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2845638 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2845641 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4232;AVGPOST=0.9945;RSQ=0.9918;ERATE=0.0007;THETA=0.0005;AC=924;AN=2184 GT:DS:GL:BD 0.42307693 0
1 2845646 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0255;AVGPOST=0.9988;RSQ=0.9801;ERATE=0.0004;THETA=0.0004;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 2845669 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.808;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7986;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2845671 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7841;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2845752 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4225;AVGPOST=0.9953;RSQ=0.9927;ERATE=0.0007;THETA=0.0051;AC=921;AN=2184 GT:DS:GL:BD 0.42170331 0
1 2845843 . CA C 4494 PASS INDEL;BAVGPOST=0.929;BRSQ=0.866;LDAF=0.3699;AVGPOST=0.9173;RSQ=0.8741;ERATE=0.0071;THETA=0.0004;AC=841;AN=2184 GT:DS:GL:BD 0.38507327 0
1 2845844 rs75651754 AG A 26149 PASS INDEL;BAVGPOST=0.981;BRSQ=0.968;LDAF=0.4193;AVGPOST=0.9848;RSQ=0.9786;ERATE=0.0007;THETA=0.0006;AC=916;AN=2184 GT:DS:GL:BD 0.41941392 0
1 2845847 . GC G 5136 PASS INDEL;BAVGPOST=0.938;BRSQ=0.889;LDAF=0.3734;AVGPOST=0.9264;RSQ=0.8897;ERATE=0.0073;THETA=0.0003;AC=837;AN=2184 GT:DS:GL:BD 0.38324177 0
1 2845875 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0065;AVGPOST=0.9984;RSQ=0.8948;ERATE=0.0005;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2845992 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.834;LDAF=0.0022;AVGPOST=0.9995;RSQ=0.9104;ERATE=0.0003;THETA=0.0037;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2846033 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2846106 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0194;AVGPOST=0.9993;RSQ=0.9828;ERATE=0.0005;THETA=0.0005;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 2846107 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.6396;ERATE=0.0004;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2846249 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0053;AVGPOST=0.9972;RSQ=0.8261;ERATE=0.0004;THETA=0.0011;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2846274 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3986;AVGPOST=0.9943;RSQ=0.9916;ERATE=0.0006;THETA=0.0007;AC=871;AN=2184 GT:DS:GL:BD 0.39880952 0
1 2846277 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0048;AVGPOST=0.9983;RSQ=0.8366;ERATE=0.0004;THETA=0.0062;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2846458 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0004;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2846518 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0067;AVGPOST=0.9979;RSQ=0.8912;ERATE=0.0004;THETA=0.0023;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 2846562 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6200;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2846591 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9403;ERATE=0.0004;THETA=0.0030;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2846596 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2846597 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0040;AVGPOST=0.9957;RSQ=0.6139;ERATE=0.0005;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2846609 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.748;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2846612 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.744;LDAF=0.0027;AVGPOST=0.9977;RSQ=0.7048;ERATE=0.0004;THETA=0.0021;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2846647 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6200;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2846668 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7771;ERATE=0.0004;THETA=0.0044;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2846726 . GCA G 37 PASS INDEL;BAVGPOST=0.939;BRSQ=0.230;LDAF=0.0890;AVGPOST=0.8632;RSQ=0.3386;ERATE=0.0075;THETA=0.0038;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 2846759 . CACAT C 1009 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0097;AVGPOST=0.9989;RSQ=0.9559;ERATE=0.0004;THETA=0.0011;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 2846775 rs78975431 CAT C 26796 PASS INDEL;BAVGPOST=0.969;BRSQ=0.921;LDAF=0.2306;AVGPOST=0.9817;RSQ=0.9596;ERATE=0.0005;THETA=0.0007;AC=503;AN=2184 GT:DS:GL:BD 0.23031135 0
1 2846791 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.876;LDAF=0.0109;AVGPOST=0.9979;RSQ=0.9158;ERATE=0.0005;THETA=0.0048;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 2846795 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.390;LDAF=0.0130;AVGPOST=0.9855;RSQ=0.5890;ERATE=0.0040;THETA=0.0016;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2846796 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4704;ERATE=0.0006;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2846863 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0055;AVGPOST=0.9972;RSQ=0.7887;ERATE=0.0006;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2846889 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0188;AVGPOST=0.9979;RSQ=0.9503;ERATE=0.0007;THETA=0.0008;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 2846899 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0067;AVGPOST=0.9979;RSQ=0.8613;ERATE=0.0005;THETA=0.0023;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2847051 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.656;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7434;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2847119 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.862;LDAF=0.0036;AVGPOST=0.9977;RSQ=0.7049;ERATE=0.0006;THETA=0.0112;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2847139 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.587;LDAF=0.0054;AVGPOST=0.9949;RSQ=0.6066;ERATE=0.0007;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2847160 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.689;LDAF=0.0064;AVGPOST=0.9932;RSQ=0.5655;ERATE=0.0012;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2847165 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.911;LDAF=0.0451;AVGPOST=0.9894;RSQ=0.9146;ERATE=0.0015;THETA=0.0026;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 2847210 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0037;AVGPOST=0.9978;RSQ=0.7525;ERATE=0.0006;THETA=0.0026;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2847220 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.955;LDAF=0.0209;AVGPOST=0.9947;RSQ=0.8869;ERATE=0.0007;THETA=0.0011;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 2847221 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.665;LDAF=0.0085;AVGPOST=0.9904;RSQ=0.5543;ERATE=0.0008;THETA=0.0034;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2847308 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0031;AVGPOST=0.9957;RSQ=0.4759;ERATE=0.0008;THETA=0.0043;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2847371 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9607;ERATE=0.0004;THETA=0.0052;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2847439 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4485;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2847488 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.973;LDAF=0.6722;AVGPOST=0.9653;RSQ=0.9453;ERATE=0.0009;THETA=0.0007;AC=1473;AN=2184 GT:DS:GL:BD 0.67445058 1
1 2847520 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0092;AVGPOST=0.9953;RSQ=0.8114;ERATE=0.0006;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2847601 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.706;LDAF=0.0044;AVGPOST=0.9949;RSQ=0.5260;ERATE=0.0006;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2847799 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0038;AVGPOST=0.9977;RSQ=0.7499;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2847809 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0080;AVGPOST=0.9972;RSQ=0.8757;ERATE=0.0006;THETA=0.0008;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2847830 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0094;AVGPOST=0.9992;RSQ=0.9609;ERATE=0.0004;THETA=0.0009;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2847858 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5631;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2847876 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1090;AVGPOST=0.9984;RSQ=0.9932;ERATE=0.0004;THETA=0.0010;AC=238;AN=2184 GT:DS:GL:BD 0.10897436 0
1 2847908 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0205;AVGPOST=0.9962;RSQ=0.9191;ERATE=0.0005;THETA=0.0011;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 2847968 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.673;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4108;ERATE=0.0005;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2847985 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.989;LDAF=0.3269;AVGPOST=0.9855;RSQ=0.9763;ERATE=0.0006;THETA=0.0005;AC=714;AN=2184 GT:DS:GL:BD 0.32692307 0
1 2847997 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.982;LDAF=0.4565;AVGPOST=0.9792;RSQ=0.9702;ERATE=0.0021;THETA=0.0005;AC=999;AN=2184 GT:DS:GL:BD 0.45741758 0
1 2848139 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.654;LDAF=0.0029;AVGPOST=0.9977;RSQ=0.6622;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2848203 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.785;LDAF=0.0030;AVGPOST=0.9983;RSQ=0.7689;ERATE=0.0005;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2848217 . AAG A 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.739;LDAF=0.0023;AVGPOST=0.9973;RSQ=0.5847;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2848256 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.937;LDAF=0.0659;AVGPOST=0.9896;RSQ=0.9374;ERATE=0.0004;THETA=0.0044;AC=136;AN=2184 GT:DS:GL:BD 0.06227106 0
1 2848363 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1642;AVGPOST=0.9982;RSQ=0.9944;ERATE=0.0004;THETA=0.0005;AC=359;AN=2184 GT:DS:GL:BD 0.16437729 0
1 2848397 . C CG 84 PASS INDEL;BAVGPOST=0.999;BRSQ=0.527;LDAF=0.0019;AVGPOST=0.9970;RSQ=0.2732;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2848477 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5492;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2848480 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0022;AVGPOST=0.9975;RSQ=0.5449;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2848520 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6029;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2848598 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6524;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2848656 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1634;AVGPOST=0.9978;RSQ=0.9943;ERATE=0.0003;THETA=0.0007;AC=358;AN=2184 GT:DS:GL:BD 0.16391942 0
1 2848665 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.765;LDAF=0.0017;AVGPOST=0.9987;RSQ=0.6976;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2848710 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7973;ERATE=0.0004;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2848796 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0092;AVGPOST=0.9996;RSQ=0.9812;ERATE=0.0004;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2848864 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0180;AVGPOST=0.9996;RSQ=0.9900;ERATE=0.0004;THETA=0.0012;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 2848957 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0079;AVGPOST=0.9992;RSQ=0.9606;ERATE=0.0003;THETA=0.0011;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2848971 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2848974 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0083;AVGPOST=0.9991;RSQ=0.9622;ERATE=0.0003;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2848976 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0085;AVGPOST=0.9989;RSQ=0.9500;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2848979 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0086;AVGPOST=0.9986;RSQ=0.9354;ERATE=0.0005;THETA=0.0016;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2849186 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9260;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2849190 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3105;AVGPOST=0.9972;RSQ=0.9946;ERATE=0.0004;THETA=0.0005;AC=677;AN=2184 GT:DS:GL:BD 0.30998167 0
1 2849287 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0180;AVGPOST=0.9996;RSQ=0.9892;ERATE=0.0004;THETA=0.0005;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 2849435 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.1087;AVGPOST=0.9949;RSQ=0.9819;ERATE=0.0006;THETA=0.0005;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 2849487 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.3834;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2849488 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.2836;AVGPOST=0.9932;RSQ=0.9870;ERATE=0.0007;THETA=0.0008;AC=619;AN=2184 GT:DS:GL:BD 0.28342491 0
1 2849489 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0035;AVGPOST=0.9985;RSQ=0.8145;ERATE=0.0005;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2849514 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0181;AVGPOST=0.9995;RSQ=0.9863;ERATE=0.0005;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 2849557 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2953;AVGPOST=0.9979;RSQ=0.9953;ERATE=0.0004;THETA=0.0002;AC=644;AN=2184 GT:DS:GL:BD 0.29487181 0
1 2849567 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0057;AVGPOST=0.9970;RSQ=0.7679;ERATE=0.0010;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2849676 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0100;AVGPOST=0.9922;RSQ=0.6780;ERATE=0.0008;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2849681 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0028;AVGPOST=0.9988;RSQ=0.7964;ERATE=0.0007;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2849767 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.658;LDAF=0.0029;AVGPOST=0.9968;RSQ=0.4991;ERATE=0.0011;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2849819 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.451;LDAF=0.0040;AVGPOST=0.9946;RSQ=0.4439;ERATE=0.0009;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2849832 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0101;AVGPOST=0.9947;RSQ=0.7869;ERATE=0.0006;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 2849898 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0038;AVGPOST=0.9990;RSQ=0.8932;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2849930 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0023;AVGPOST=0.9968;RSQ=0.4758;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2849931 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0027;AVGPOST=0.9989;RSQ=0.8323;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2849944 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0183;AVGPOST=0.9991;RSQ=0.9766;ERATE=0.0005;THETA=0.0005;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 2849972 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0566;AVGPOST=0.9989;RSQ=0.9921;ERATE=0.0004;THETA=0.0006;AC=124;AN=2184 GT:DS:GL:BD 0.05677656 0
1 2849978 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.717;LDAF=0.0037;AVGPOST=0.9966;RSQ=0.6203;ERATE=0.0010;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2850112 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.2372;AVGPOST=0.9902;RSQ=0.9788;ERATE=0.0019;THETA=0.0006;AC=516;AN=2184 GT:DS:GL:BD 0.23626374 0
1 2850181 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.2598;AVGPOST=0.9943;RSQ=0.9883;ERATE=0.0004;THETA=0.0012;AC=569;AN=2184 GT:DS:GL:BD 0.26053113 0
1 2850285 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.631;LDAF=0.0048;AVGPOST=0.9918;RSQ=0.3294;ERATE=0.0010;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2850445 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.591;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.3989;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2850556 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.771;LDAF=0.0024;AVGPOST=0.9984;RSQ=0.7168;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2850600 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0128;AVGPOST=0.9990;RSQ=0.9667;ERATE=0.0004;THETA=0.0008;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 2850666 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.803;LDAF=0.0041;AVGPOST=0.9978;RSQ=0.7865;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2850715 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.752;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6082;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2850745 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0021;AVGPOST=0.9968;RSQ=0.4060;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2850910 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4562;ERATE=0.0004;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2850952 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0045;AVGPOST=0.9972;RSQ=0.7539;ERATE=0.0006;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2851011 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0077;AVGPOST=0.9985;RSQ=0.9085;ERATE=0.0006;THETA=0.0012;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2851064 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0021;AVGPOST=0.9990;RSQ=0.7931;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2851113 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0064;AVGPOST=0.9968;RSQ=0.8109;ERATE=0.0008;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2851119 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0151;AVGPOST=0.9987;RSQ=0.9647;ERATE=0.0003;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 2851139 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9197;ERATE=0.0005;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2851165 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2851238 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.4240;AVGPOST=0.9954;RSQ=0.9929;ERATE=0.0005;THETA=0.0007;AC=925;AN=2184 GT:DS:GL:BD 0.42353481 0
1 2851240 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.837;LDAF=0.0046;AVGPOST=0.9987;RSQ=0.9006;ERATE=0.0003;THETA=0.0012;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2851271 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7973;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2851297 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.720;LDAF=0.0041;AVGPOST=0.9956;RSQ=0.6168;ERATE=0.0006;THETA=0.0011;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2851300 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0108;AVGPOST=0.9992;RSQ=0.9649;ERATE=0.0003;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 2851473 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.711;LDAF=0.0025;AVGPOST=0.9969;RSQ=0.5213;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2851503 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.8294;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2851593 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.674;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4282;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2851647 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0040;AVGPOST=0.9988;RSQ=0.8647;ERATE=0.0004;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2851651 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.918;LDAF=0.0192;AVGPOST=0.9975;RSQ=0.9496;ERATE=0.0006;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 2851717 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.584;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6043;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2851947 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0021;AVGPOST=0.9982;RSQ=0.6210;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2851977 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0492;AVGPOST=0.9983;RSQ=0.9850;ERATE=0.0004;THETA=0.0009;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 2852102 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7529;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2852206 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.3959;AVGPOST=0.9958;RSQ=0.9928;ERATE=0.0007;THETA=0.0005;AC=863;AN=2184 GT:DS:GL:BD 0.39514652 0
1 2852225 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9344;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2852530 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.548;LDAF=0.0027;AVGPOST=0.9963;RSQ=0.3611;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2852653 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.764;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.5713;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2852682 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0046;AVGPOST=0.9990;RSQ=0.9192;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2852707 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1088;AVGPOST=0.9973;RSQ=0.9885;ERATE=0.0004;THETA=0.0006;AC=238;AN=2184 GT:DS:GL:BD 0.10897436 0
1 2852813 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0027;AVGPOST=0.9995;RSQ=0.9168;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2852825 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4786;AVGPOST=0.9959;RSQ=0.9936;ERATE=0.0008;THETA=0.0004;AC=1046;AN=2184 GT:DS:GL:BD 0.47893772 0
1 2853003 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3942;AVGPOST=0.9982;RSQ=0.9970;ERATE=0.0005;THETA=0.0004;AC=860;AN=2184 GT:DS:GL:BD 0.39377290 0
1 2853005 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2853039 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2853133 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2853199 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0058;AVGPOST=0.9993;RSQ=0.9439;ERATE=0.0004;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2853202 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0061;AVGPOST=0.9972;RSQ=0.8225;ERATE=0.0005;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2853251 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0104;AVGPOST=0.9995;RSQ=0.9760;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 2853362 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.520;LDAF=0.0017;AVGPOST=0.9982;RSQ=0.5293;ERATE=0.0007;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2853439 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0015;AVGPOST=0.9993;RSQ=0.7894;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2853503 . G GCA 906 PASS INDEL;BAVGPOST=0.975;BRSQ=0.539;LDAF=0.0412;AVGPOST=0.9766;RSQ=0.7873;ERATE=0.0017;THETA=0.0004;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 2853591 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.648;LDAF=0.0046;AVGPOST=0.9965;RSQ=0.6667;ERATE=0.0006;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2853612 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0085;AVGPOST=0.9954;RSQ=0.7913;ERATE=0.0005;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 2853759 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4239;AVGPOST=0.9981;RSQ=0.9969;ERATE=0.0005;THETA=0.0010;AC=926;AN=2184 GT:DS:GL:BD 0.42399266 0
1 2853834 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0023;AVGPOST=0.9974;RSQ=0.5835;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2853868 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0210;AVGPOST=0.9986;RSQ=0.9737;ERATE=0.0003;THETA=0.0014;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 2853877 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0090;AVGPOST=0.9981;RSQ=0.9105;ERATE=0.0004;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2853888 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4590;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2853938 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5547;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2853951 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6900;ERATE=0.0006;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2853968 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0020;AVGPOST=0.9985;RSQ=0.7170;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2853973 . AG A 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.713;LDAF=0.0024;AVGPOST=0.9966;RSQ=0.4126;ERATE=0.0005;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2854099 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9375;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2854171 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0180;AVGPOST=0.9997;RSQ=0.9926;ERATE=0.0003;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 2854172 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.896;LDAF=0.0072;AVGPOST=0.9973;RSQ=0.8728;ERATE=0.0004;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2854205 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4087;AVGPOST=0.9978;RSQ=0.9962;ERATE=0.0004;THETA=0.0004;AC=891;AN=2184 GT:DS:GL:BD 0.40796703 0
1 2854216 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8283;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2854273 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4133;AVGPOST=0.9966;RSQ=0.9945;ERATE=0.0005;THETA=0.0004;AC=900;AN=2184 GT:DS:GL:BD 0.41208792 0
1 2854297 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0184;AVGPOST=0.9989;RSQ=0.9811;ERATE=0.0004;THETA=0.0006;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 2854311 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.764;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7192;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2854364 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7882;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2854371 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.973;LDAF=0.0391;AVGPOST=0.9957;RSQ=0.9556;ERATE=0.0005;THETA=0.0003;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 2854461 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.953;LDAF=0.0848;AVGPOST=0.9918;RSQ=0.9569;ERATE=0.0006;THETA=0.0003;AC=182;AN=2184 GT:DS:GL:BD 0.08333334 0
1 2854525 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8036;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2854536 . TAC T 1262 PASS INDEL;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0211;AVGPOST=0.9982;RSQ=0.9674;ERATE=0.0004;THETA=0.0002;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 2854544 . CAT C 5119 PASS INDEL;BAVGPOST=0.998;BRSQ=0.981;LDAF=0.0207;AVGPOST=0.9987;RSQ=0.9727;ERATE=0.0004;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 2854572 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0055;AVGPOST=0.9990;RSQ=0.9285;ERATE=0.0003;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2854573 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8796;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2854657 . GC G 1178 PASS INDEL;BAVGPOST=0.997;BRSQ=0.885;LDAF=0.0101;AVGPOST=0.9977;RSQ=0.9055;ERATE=0.0004;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2854669 . GCACA G 349 PASS INDEL;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8260;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2854680 . CAG C 159 PASS INDEL;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0039;AVGPOST=0.9965;RSQ=0.6615;ERATE=0.0006;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2854758 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2854774 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0046;AVGPOST=0.9983;RSQ=0.8787;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2854890 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0049;AVGPOST=0.9993;RSQ=0.9500;ERATE=0.0004;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2854953 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8664;ERATE=0.0004;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2854986 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9603;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2854987 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6171;ERATE=0.0006;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2855038 . CA C 757 PASS INDEL;BAVGPOST=0.989;BRSQ=0.775;LDAF=0.0194;AVGPOST=0.9904;RSQ=0.8181;ERATE=0.0004;THETA=0.0005;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 2855039 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.981;LDAF=0.0544;AVGPOST=0.9980;RSQ=0.9870;ERATE=0.0003;THETA=0.0006;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 2855110 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.508;LDAF=0.0134;AVGPOST=0.9845;RSQ=0.5607;ERATE=0.0052;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 2855111 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0161;AVGPOST=0.9984;RSQ=0.9604;ERATE=0.0007;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 2855237 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.923;LDAF=0.0371;AVGPOST=0.9935;RSQ=0.9251;ERATE=0.0004;THETA=0.0005;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 2855408 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.890;LDAF=0.0050;AVGPOST=0.9978;RSQ=0.8287;ERATE=0.0004;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2855500 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.701;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5492;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2855501 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2855669 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8513;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2855997 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0178;AVGPOST=0.9993;RSQ=0.9814;ERATE=0.0003;THETA=0.0005;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 2856046 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0049;AVGPOST=0.9994;RSQ=0.9585;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2856122 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0038;AVGPOST=0.9993;RSQ=0.9203;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2856146 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0015;AVGPOST=0.9990;RSQ=0.7195;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2856212 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0023;AVGPOST=0.9993;RSQ=0.8825;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2856316 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.726;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6494;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2856391 . TC T 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0015;AVGPOST=0.9990;RSQ=0.7070;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2856435 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.756;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2856599 . T TC 27 PASS INDEL;BAVGPOST=0.999;BRSQ=0.741;LDAF=0.0025;AVGPOST=0.9973;RSQ=0.5803;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2856613 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0023;AVGPOST=0.9998;RSQ=0.9537;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2856631 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5093;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2856664 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.786;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6075;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2856685 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9773;ERATE=0.0004;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2856765 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2856799 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0042;AVGPOST=0.9994;RSQ=0.9350;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2856859 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2856860 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0035;AVGPOST=0.9984;RSQ=0.8251;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2857121 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0069;AVGPOST=0.9954;RSQ=0.7407;ERATE=0.0004;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2857126 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.748;LDAF=0.0009;AVGPOST=0.9988;RSQ=0.4563;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2857151 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.921;LDAF=0.0085;AVGPOST=0.9973;RSQ=0.8841;ERATE=0.0004;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2857278 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5495;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2857290 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0037;AVGPOST=0.9977;RSQ=0.7513;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2857431 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9206;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2857479 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0020;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2857544 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7883;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2857564 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0089;AVGPOST=0.9993;RSQ=0.9624;ERATE=0.0004;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 2857749 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0023;AVGPOST=0.9993;RSQ=0.8838;ERATE=0.0004;THETA=0.0013;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2857758 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8782;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2857905 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7841;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2858113 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8154;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2858138 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2858213 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6112;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2858228 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.690;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7393;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2858252 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0033;AVGPOST=0.9992;RSQ=0.9011;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2858339 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0001;AVGPOST=0.9998;RSQ=0.1123;ERATE=0.0003;THETA=0.0007;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 2858400 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2858409 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0548;AVGPOST=0.9992;RSQ=0.9942;ERATE=0.0004;THETA=0.0011;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 2858433 . AGCT A 8 PASS INDEL;BAVGPOST=0.997;BRSQ=0.566;LDAF=0.0080;AVGPOST=0.9889;RSQ=0.4519;ERATE=0.0025;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2858460 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8504;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2858548 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3937;AVGPOST=0.9949;RSQ=0.9910;ERATE=0.0004;THETA=0.0015;AC=860;AN=2184 GT:DS:GL:BD 0.39377290 0
1 2858562 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0016;AVGPOST=0.9983;RSQ=0.5151;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2858597 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.5777;ERATE=0.0007;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2858610 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.7976;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2858705 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0029;AVGPOST=0.9987;RSQ=0.8396;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2858727 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0181;AVGPOST=0.9992;RSQ=0.9801;ERATE=0.0003;THETA=0.0009;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 2858780 . TGA T 176 PASS INDEL;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8879;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2858889 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.9122;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2858945 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5801;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2859007 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0051;AVGPOST=0.9990;RSQ=0.9122;ERATE=0.0017;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2859034 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0022;AVGPOST=0.9988;RSQ=0.7740;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2859175 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0026;AVGPOST=0.9981;RSQ=0.6914;ERATE=0.0007;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2859195 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0200;AVGPOST=0.9986;RSQ=0.9698;ERATE=0.0005;THETA=0.0004;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 2859213 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0199;AVGPOST=0.9984;RSQ=0.9647;ERATE=0.0004;THETA=0.0007;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 2859241 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.774;LDAF=0.0040;AVGPOST=0.9975;RSQ=0.7361;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2859289 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.899;LDAF=0.0058;AVGPOST=0.9979;RSQ=0.8482;ERATE=0.0004;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2859326 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8483;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2859406 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.594;LDAF=0.0046;AVGPOST=0.9946;RSQ=0.5975;ERATE=0.0008;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2859412 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.441;LDAF=0.0045;AVGPOST=0.9948;RSQ=0.5692;ERATE=0.0006;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2859444 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.904;LDAF=0.0094;AVGPOST=0.9973;RSQ=0.8835;ERATE=0.0005;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 2859492 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9375;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2859522 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7515;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2859554 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0066;AVGPOST=0.9995;RSQ=0.9644;ERATE=0.0005;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2859593 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0025;AVGPOST=0.9991;RSQ=0.8520;ERATE=0.0003;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2859616 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9088;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2859624 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0115;AVGPOST=0.9993;RSQ=0.9696;ERATE=0.0003;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 2859630 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.830;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.6261;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2859631 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0008;AVGPOST=0.9989;RSQ=0.3784;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2859633 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.980;LDAF=0.1277;AVGPOST=0.9915;RSQ=0.9726;ERATE=0.0009;THETA=0.0007;AC=276;AN=2184 GT:DS:GL:BD 0.12637363 0
1 2859640 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0133;AVGPOST=0.9979;RSQ=0.9307;ERATE=0.0004;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 2859668 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.966;LDAF=0.0354;AVGPOST=0.9938;RSQ=0.9303;ERATE=0.0004;THETA=0.0006;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 2859724 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.981;LDAF=0.1741;AVGPOST=0.9908;RSQ=0.9740;ERATE=0.0004;THETA=0.0002;AC=377;AN=2184 GT:DS:GL:BD 0.17261904 0
1 2859732 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.783;LDAF=0.0029;AVGPOST=0.9970;RSQ=0.6551;ERATE=0.0005;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2859738 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0058;AVGPOST=0.9980;RSQ=0.8661;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2859796 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.736;LDAF=0.0144;AVGPOST=0.9840;RSQ=0.5551;ERATE=0.0044;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2859806 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0115;AVGPOST=0.9972;RSQ=0.9234;ERATE=0.0004;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 2859820 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0040;AVGPOST=0.9975;RSQ=0.7515;ERATE=0.0010;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2859827 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0455;AVGPOST=0.9981;RSQ=0.9836;ERATE=0.0004;THETA=0.0006;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 2859876 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.909;LDAF=0.0046;AVGPOST=0.9985;RSQ=0.8846;ERATE=0.0004;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2859924 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6252;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2859935 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5415;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2860048 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6991;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2860079 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0108;AVGPOST=0.9989;RSQ=0.9565;ERATE=0.0004;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 2860095 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9351;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2860122 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5515;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2860140 . AT A 52 PASS INDEL;BAVGPOST=0.982;BRSQ=0.441;LDAF=0.0278;AVGPOST=0.9607;RSQ=0.4178;ERATE=0.0100;THETA=0.0009;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 2860187 . TA T 148 PASS INDEL;BAVGPOST=0.996;BRSQ=0.658;LDAF=0.0066;AVGPOST=0.9941;RSQ=0.6523;ERATE=0.0006;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2860250 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0029;AVGPOST=0.9977;RSQ=0.6682;ERATE=0.0007;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2860288 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0015;AVGPOST=0.9983;RSQ=0.5307;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2860351 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.765;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4759;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2860386 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0135;AVGPOST=0.9990;RSQ=0.9722;ERATE=0.0004;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 2860416 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2860419 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0043;AVGPOST=0.9979;RSQ=0.8004;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2860451 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4291;ERATE=0.0005;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2860487 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8870;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2860523 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5341;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2860544 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.819;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7577;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2860549 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0017;AVGPOST=0.9982;RSQ=0.6488;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2860619 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5817;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2860637 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0062;AVGPOST=0.9961;RSQ=0.7683;ERATE=0.0006;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2860650 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.925;LDAF=0.0277;AVGPOST=0.9935;RSQ=0.9151;ERATE=0.0005;THETA=0.0008;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 2860809 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8798;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2860931 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.989;LDAF=0.6854;AVGPOST=0.9931;RSQ=0.9883;ERATE=0.0004;THETA=0.0017;AC=1497;AN=2184 GT:DS:GL:BD 0.68543959 1
1 2860977 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8411;ERATE=0.0004;THETA=0.0035;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2861027 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9809;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2861037 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.8277;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2861176 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9483;ERATE=0.0004;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2861203 rs111603921 ATGTGTGTC A 91385 PASS INDEL;BAVGPOST=0.990;BRSQ=0.982;LDAF=0.3879;AVGPOST=0.9908;RSQ=0.9858;ERATE=0.0032;THETA=0.0003;AC=851;AN=2184 GT:DS:GL:BD 0.38965201 0
1 2861252 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2861271 . CTGAG C 777 PASS INDEL;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8959;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2861307 . CTGAG C 711 PASS INDEL;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0051;AVGPOST=0.9983;RSQ=0.8677;ERATE=0.0006;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2861310 . AGTGT A 2124 PASS INDEL;BAVGPOST=0.998;BRSQ=0.904;LDAF=0.0070;AVGPOST=0.9969;RSQ=0.8100;ERATE=0.0022;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2861360 . TGTTA T 469 PASS INDEL;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2861453 . ATG A 5008 PASS INDEL;BAVGPOST=0.998;BRSQ=0.952;LDAF=0.0189;AVGPOST=0.9991;RSQ=0.9788;ERATE=0.0004;THETA=0.0006;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 2861509 . CTG C 5179 PASS INDEL;BAVGPOST=0.993;BRSQ=0.846;LDAF=0.0251;AVGPOST=0.9897;RSQ=0.8252;ERATE=0.0040;THETA=0.0005;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 2861522 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0112;AVGPOST=0.9963;RSQ=0.8674;ERATE=0.0006;THETA=0.0009;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 2861565 . ATG A 17466 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0553;AVGPOST=0.9994;RSQ=0.9953;ERATE=0.0004;THETA=0.0006;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 2861600 . CAT C 2191 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0070;AVGPOST=0.9996;RSQ=0.9787;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 2861631 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2514;AVGPOST=0.9978;RSQ=0.9955;ERATE=0.0004;THETA=0.0004;AC=549;AN=2184 GT:DS:GL:BD 0.25137362 0
1 2861636 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0180;AVGPOST=0.9996;RSQ=0.9898;ERATE=0.0003;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 2861659 . GTGTC G 1258 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0065;AVGPOST=0.9989;RSQ=0.9310;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2861698 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.868;LDAF=0.0098;AVGPOST=0.9950;RSQ=0.8032;ERATE=0.0029;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2861742 . TGTC T 523 PASS INDEL;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0027;AVGPOST=0.9993;RSQ=0.8726;ERATE=0.0006;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2861781 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0180;AVGPOST=0.9996;RSQ=0.9896;ERATE=0.0003;THETA=0.0031;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 2861797 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0762;AVGPOST=0.9990;RSQ=0.9952;ERATE=0.0004;THETA=0.0006;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 2861840 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.4782;AVGPOST=0.9990;RSQ=0.9983;ERATE=0.0004;THETA=0.0003;AC=1045;AN=2184 GT:DS:GL:BD 0.47847986 0
1 2861854 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9095;ERATE=0.0007;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2861875 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.832;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.9026;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2861881 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0041;AVGPOST=0.9990;RSQ=0.9045;ERATE=0.0003;THETA=0.0036;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2861882 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.5004;AVGPOST=0.9968;RSQ=0.9953;ERATE=0.0004;THETA=0.0009;AC=1094;AN=2184 GT:DS:GL:BD 0.50091577 1
1 2861883 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7607;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2862016 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9107;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2862065 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.6901;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2862066 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.938;LDAF=0.0127;AVGPOST=0.9985;RSQ=0.9581;ERATE=0.0003;THETA=0.0010;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 2862183 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0023;AVGPOST=0.9988;RSQ=0.7578;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2862320 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3923;AVGPOST=0.9989;RSQ=0.9980;ERATE=0.0004;THETA=0.0004;AC=856;AN=2184 GT:DS:GL:BD 0.39194140 0
1 2862402 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.983;LDAF=0.0494;AVGPOST=0.9986;RSQ=0.9878;ERATE=0.0005;THETA=0.0018;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 2862426 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0126;AVGPOST=0.9995;RSQ=0.9789;ERATE=0.0004;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 2862461 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.687;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5072;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2862480 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.991;LDAF=0.3954;AVGPOST=0.9930;RSQ=0.9885;ERATE=0.0005;THETA=0.0007;AC=858;AN=2184 GT:DS:GL:BD 0.39285713 0
1 2862481 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.983;LDAF=0.0768;AVGPOST=0.9976;RSQ=0.9884;ERATE=0.0003;THETA=0.0006;AC=167;AN=2184 GT:DS:GL:BD 0.07646520 0
1 2862524 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0035;AVGPOST=0.9985;RSQ=0.8340;ERATE=0.0004;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2862619 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0772;AVGPOST=0.9964;RSQ=0.9843;ERATE=0.0003;THETA=0.0002;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 2862695 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0456;AVGPOST=0.9979;RSQ=0.9833;ERATE=0.0003;THETA=0.0003;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 2862696 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.949;LDAF=0.0184;AVGPOST=0.9971;RSQ=0.9362;ERATE=0.0003;THETA=0.0003;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 2862855 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4762;AVGPOST=0.9882;RSQ=0.9831;ERATE=0.0022;THETA=0.0008;AC=1041;AN=2184 GT:DS:GL:BD 0.47664836 0
1 2862863 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.750;LDAF=0.0049;AVGPOST=0.9966;RSQ=0.6832;ERATE=0.0006;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2862997 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.761;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7564;ERATE=0.0004;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2863031 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0111;AVGPOST=0.9996;RSQ=0.9839;ERATE=0.0004;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 2863092 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.698;LDAF=0.0122;AVGPOST=0.9970;RSQ=0.8994;ERATE=0.0005;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 2863115 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.988;LDAF=0.4806;AVGPOST=0.9770;RSQ=0.9662;ERATE=0.0030;THETA=0.0015;AC=1054;AN=2184 GT:DS:GL:BD 0.48260072 0
1 2863168 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.713;LDAF=0.0027;AVGPOST=0.9974;RSQ=0.6335;ERATE=0.0006;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2863288 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2863362 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6616;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2863385 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4790;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2863482 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0038;AVGPOST=0.9984;RSQ=0.8209;ERATE=0.0010;THETA=0.0016;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2863531 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0512;AVGPOST=0.9987;RSQ=0.9893;ERATE=0.0004;THETA=0.0010;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 2863548 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.789;LDAF=0.0058;AVGPOST=0.9970;RSQ=0.7979;ERATE=0.0005;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2863550 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9280;ERATE=0.0005;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2863646 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0700;AVGPOST=0.9979;RSQ=0.9870;ERATE=0.0004;THETA=0.0005;AC=151;AN=2184 GT:DS:GL:BD 0.06913920 0
1 2863692 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.775;LDAF=0.0021;AVGPOST=0.9968;RSQ=0.3991;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2863693 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5402;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2863738 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0106;AVGPOST=0.9985;RSQ=0.9377;ERATE=0.0006;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 2863784 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0189;AVGPOST=0.9982;RSQ=0.9617;ERATE=0.0003;THETA=0.0004;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 2863846 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.986;LDAF=0.1259;AVGPOST=0.9898;RSQ=0.9674;ERATE=0.0003;THETA=0.0008;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 2863963 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.4793;AVGPOST=0.9944;RSQ=0.9912;ERATE=0.0005;THETA=0.0008;AC=1045;AN=2184 GT:DS:GL:BD 0.47847986 0
1 2863985 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.673;LDAF=0.0040;AVGPOST=0.9959;RSQ=0.6123;ERATE=0.0008;THETA=0.0012;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2863988 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6373;ERATE=0.0004;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2864015 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3835;AVGPOST=0.9931;RSQ=0.9886;ERATE=0.0007;THETA=0.0059;AC=837;AN=2184 GT:DS:GL:BD 0.38324177 0
1 2864269 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0082;AVGPOST=0.9959;RSQ=0.8237;ERATE=0.0004;THETA=0.0065;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2864346 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0032;AVGPOST=0.9968;RSQ=0.6227;ERATE=0.0005;THETA=0.0142;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2864530 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.914;LDAF=0.0401;AVGPOST=0.9909;RSQ=0.9078;ERATE=0.0009;THETA=0.0084;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 2864630 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.920;LDAF=0.0387;AVGPOST=0.9895;RSQ=0.8901;ERATE=0.0003;THETA=0.0018;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 2864708 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.795;LDAF=0.0099;AVGPOST=0.9873;RSQ=0.5088;ERATE=0.0021;THETA=0.0030;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2864778 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0170;AVGPOST=0.9958;RSQ=0.8993;ERATE=0.0008;THETA=0.0038;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 2864925 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0740;AVGPOST=0.9975;RSQ=0.9866;ERATE=0.0005;THETA=0.0023;AC=161;AN=2184 GT:DS:GL:BD 0.07371795 0
1 2864967 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8472;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2864970 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0111;AVGPOST=0.9984;RSQ=0.9371;ERATE=0.0004;THETA=0.0010;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 2865014 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0738;AVGPOST=0.9978;RSQ=0.9882;ERATE=0.0004;THETA=0.0010;AC=161;AN=2184 GT:DS:GL:BD 0.07371795 0
1 2865107 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2865139 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0153;AVGPOST=0.9991;RSQ=0.9727;ERATE=0.0004;THETA=0.0023;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 2865166 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0039;AVGPOST=0.9982;RSQ=0.8188;ERATE=0.0004;THETA=0.0031;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2865248 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0104;AVGPOST=0.9991;RSQ=0.9597;ERATE=0.0005;THETA=0.0007;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 2865255 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0027;AVGPOST=0.9987;RSQ=0.7937;ERATE=0.0004;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2865271 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.715;LDAF=0.0102;AVGPOST=0.9909;RSQ=0.6522;ERATE=0.0008;THETA=0.0008;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2865304 . G GT 8 PASS INDEL;BAVGPOST=0.999;BRSQ=0.577;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.3898;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2865345 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0533;AVGPOST=0.9986;RSQ=0.9893;ERATE=0.0004;THETA=0.0005;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 2865363 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.930;LDAF=0.0205;AVGPOST=0.9973;RSQ=0.9466;ERATE=0.0005;THETA=0.0014;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 2865405 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0029;AVGPOST=0.9988;RSQ=0.8117;ERATE=0.0004;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2865411 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9599;ERATE=0.0003;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2865420 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.692;LDAF=0.0023;AVGPOST=0.9979;RSQ=0.5996;ERATE=0.0008;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2865707 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.789;LDAF=0.0031;AVGPOST=0.9984;RSQ=0.7891;ERATE=0.0004;THETA=0.0019;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2865712 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.707;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.6918;ERATE=0.0007;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2865778 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0932;AVGPOST=0.9977;RSQ=0.9907;ERATE=0.0004;THETA=0.0027;AC=203;AN=2184 GT:DS:GL:BD 0.09294872 0
1 2865785 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0017;AVGPOST=0.9973;RSQ=0.3879;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2865828 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2865901 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0189;AVGPOST=0.9989;RSQ=0.9752;ERATE=0.0003;THETA=0.0041;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 2865907 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.819;LDAF=0.0032;AVGPOST=0.9974;RSQ=0.6565;ERATE=0.0004;THETA=0.0021;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2866021 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0072;AVGPOST=0.9969;RSQ=0.8277;ERATE=0.0004;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2866037 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.733;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6432;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2866055 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0038;AVGPOST=0.9971;RSQ=0.6917;ERATE=0.0007;THETA=0.0016;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2866094 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0181;AVGPOST=0.9986;RSQ=0.9650;ERATE=0.0005;THETA=0.0011;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 2866136 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.962;BRSQ=0.481;LDAF=0.0563;AVGPOST=0.9269;RSQ=0.4506;ERATE=0.0075;THETA=0.0004;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 2866138 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.956;BRSQ=0.483;LDAF=0.0726;AVGPOST=0.9102;RSQ=0.4597;ERATE=0.0100;THETA=0.0010;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 2866667 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.892;LDAF=0.0217;AVGPOST=0.9967;RSQ=0.9448;ERATE=0.0004;THETA=0.0016;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 2866667 . CG C 32 PASS INDEL;BAVGPOST=0.996;BRSQ=0.775;LDAF=0.0157;AVGPOST=0.9894;RSQ=0.7523;ERATE=0.0006;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 2866728 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.658;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5646;ERATE=0.0004;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2866736 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.586;LDAF=0.0028;AVGPOST=0.9968;RSQ=0.5134;ERATE=0.0007;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2866824 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0268;AVGPOST=0.9993;RSQ=0.9877;ERATE=0.0004;THETA=0.0003;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 2866927 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.565;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5709;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2866932 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3870;AVGPOST=0.9976;RSQ=0.9957;ERATE=0.0005;THETA=0.0014;AC=845;AN=2184 GT:DS:GL:BD 0.38690478 0
1 2866933 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0034;AVGPOST=0.9959;RSQ=0.5064;ERATE=0.0013;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2866972 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3873;AVGPOST=0.9974;RSQ=0.9956;ERATE=0.0005;THETA=0.0005;AC=845;AN=2184 GT:DS:GL:BD 0.38690478 0
1 2867029 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6830;ERATE=0.0006;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2867047 . A AG 90 PASS INDEL;BAVGPOST=1.000;BRSQ=0.696;LDAF=0.0018;AVGPOST=0.9974;RSQ=0.3607;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2867071 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0054;AVGPOST=0.9982;RSQ=0.8718;ERATE=0.0004;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2867075 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0268;AVGPOST=0.9993;RSQ=0.9870;ERATE=0.0004;THETA=0.0004;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 2867148 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3875;AVGPOST=0.9977;RSQ=0.9961;ERATE=0.0006;THETA=0.0005;AC=845;AN=2184 GT:DS:GL:BD 0.38690478 0
1 2867149 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.7785;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2867252 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0061;AVGPOST=0.9997;RSQ=0.9748;ERATE=0.0003;THETA=0.0009;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2867326 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2867340 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5297;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2867466 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7952;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2867507 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0243;AVGPOST=0.9994;RSQ=0.9887;ERATE=0.0004;THETA=0.0016;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 2867579 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.8977;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2867584 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5741;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2867611 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4319;AVGPOST=0.9957;RSQ=0.9932;ERATE=0.0008;THETA=0.0004;AC=943;AN=2184 GT:DS:GL:BD 0.43177655 0
1 2867689 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0210;AVGPOST=0.9973;RSQ=0.9560;ERATE=0.0003;THETA=0.0015;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 2867743 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.977;LDAF=0.4318;AVGPOST=0.9968;RSQ=0.9946;ERATE=0.0005;THETA=0.0004;AC=943;AN=2184 GT:DS:GL:BD 0.43177655 0
1 2867746 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.977;LDAF=0.4310;AVGPOST=0.9956;RSQ=0.9929;ERATE=0.0006;THETA=0.0010;AC=941;AN=2184 GT:DS:GL:BD 0.43086082 0
1 2867754 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0212;AVGPOST=0.9976;RSQ=0.9559;ERATE=0.0004;THETA=0.0011;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 2867770 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.977;LDAF=0.4319;AVGPOST=0.9963;RSQ=0.9938;ERATE=0.0006;THETA=0.0008;AC=943;AN=2184 GT:DS:GL:BD 0.43177655 0
1 2867797 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.695;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5025;ERATE=0.0006;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2867830 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0426;AVGPOST=0.9986;RSQ=0.9864;ERATE=0.0004;THETA=0.0012;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 2867837 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0214;AVGPOST=0.9982;RSQ=0.9634;ERATE=0.0005;THETA=0.0008;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 2867904 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4100;AVGPOST=0.9949;RSQ=0.9923;ERATE=0.0005;THETA=0.0007;AC=897;AN=2184 GT:DS:GL:BD 0.41071430 0
1 2867916 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0257;AVGPOST=0.9993;RSQ=0.9873;ERATE=0.0003;THETA=0.0004;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 2867932 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.3912;AVGPOST=0.9940;RSQ=0.9909;ERATE=0.0008;THETA=0.0005;AC=854;AN=2184 GT:DS:GL:BD 0.39102563 0
1 2867933 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2867961 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3860;AVGPOST=0.9963;RSQ=0.9941;ERATE=0.0005;THETA=0.0013;AC=843;AN=2184 GT:DS:GL:BD 0.38598901 0
1 2868062 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.833;LDAF=0.0094;AVGPOST=0.9956;RSQ=0.7913;ERATE=0.0004;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2868122 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0042;AVGPOST=0.9989;RSQ=0.9021;ERATE=0.0004;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2868127 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.738;LDAF=0.0058;AVGPOST=0.9975;RSQ=0.8292;ERATE=0.0003;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2868156 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0205;AVGPOST=0.9985;RSQ=0.9698;ERATE=0.0003;THETA=0.0004;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 2868169 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.689;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6112;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2868304 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0037;AVGPOST=0.9983;RSQ=0.7904;ERATE=0.0008;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2868355 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.9077;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2868429 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8523;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2868445 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6688;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2868455 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.862;LDAF=0.0097;AVGPOST=0.9969;RSQ=0.8907;ERATE=0.0003;THETA=0.0016;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2868464 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4822;ERATE=0.0006;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2868490 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5966;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2868718 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.921;LDAF=0.0143;AVGPOST=0.9959;RSQ=0.8899;ERATE=0.0005;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2868742 . GA G 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.646;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.3524;ERATE=0.0006;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2868774 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8475;ERATE=0.0005;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2868817 rs35808454 ACACT A 37 PASS INDEL;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0019;AVGPOST=0.9976;RSQ=0.5471;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2868864 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8015;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2868879 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5966;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2868892 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.952;LDAF=0.0328;AVGPOST=0.9966;RSQ=0.9621;ERATE=0.0003;THETA=0.0003;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 2868918 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0046;AVGPOST=0.9990;RSQ=0.9077;ERATE=0.0005;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2869069 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.6840;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2869137 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.7880;ERATE=0.0004;THETA=0.0019;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2869210 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9488;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2869241 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7800;ERATE=0.0004;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2869323 rs34869376 ACT A 31895 PASS INDEL;BAVGPOST=0.976;BRSQ=0.955;LDAF=0.3974;AVGPOST=0.9860;RSQ=0.9783;ERATE=0.0003;THETA=0.0008;AC=873;AN=2184 GT:DS:GL:BD 0.39972529 0
1 2869326 . CTT C 9936 PASS INDEL;BAVGPOST=0.975;BRSQ=0.952;LDAF=0.3875;AVGPOST=0.9711;RSQ=0.9563;ERATE=0.0026;THETA=0.0007;AC=859;AN=2184 GT:DS:GL:BD 0.39331502 0
1 2869342 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7326;ERATE=0.0006;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2869343 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0050;AVGPOST=0.9965;RSQ=0.7392;ERATE=0.0013;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2869379 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0047;AVGPOST=0.9988;RSQ=0.9149;ERATE=0.0004;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2869382 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.855;LDAF=0.0038;AVGPOST=0.9987;RSQ=0.8550;ERATE=0.0004;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2869409 rs34009406 A AC 30532 PASS INDEL;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.4074;AVGPOST=0.9852;RSQ=0.9769;ERATE=0.0016;THETA=0.0005;AC=889;AN=2184 GT:DS:GL:BD 0.40705130 0
1 2869410 . C CA 9681 PASS INDEL;BAVGPOST=0.981;BRSQ=0.965;LDAF=0.3976;AVGPOST=0.9775;RSQ=0.9655;ERATE=0.0022;THETA=0.0006;AC=875;AN=2184 GT:DS:GL:BD 0.40064102 0
1 2869414 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9882;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2869523 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0050;AVGPOST=0.9988;RSQ=0.9241;ERATE=0.0004;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2869549 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0023;AVGPOST=0.9998;RSQ=0.9626;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2869567 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0035;AVGPOST=0.9989;RSQ=0.8943;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2869571 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2869592 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0112;AVGPOST=0.9994;RSQ=0.9802;ERATE=0.0003;THETA=0.0008;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 2869697 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6800;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2869789 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.797;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2869872 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7497;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2869913 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4080;AVGPOST=0.9976;RSQ=0.9961;ERATE=0.0006;THETA=0.0005;AC=891;AN=2184 GT:DS:GL:BD 0.40796703 0
1 2869945 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0196;AVGPOST=0.9998;RSQ=0.9957;ERATE=0.0003;THETA=0.0006;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 2869961 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0196;AVGPOST=0.9998;RSQ=0.9957;ERATE=0.0003;THETA=0.0005;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 2870011 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2870023 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0154;AVGPOST=0.9994;RSQ=0.9809;ERATE=0.0003;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 2870034 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2870056 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2870058 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7143;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2870136 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2870365 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.969;LDAF=0.0361;AVGPOST=0.9970;RSQ=0.9744;ERATE=0.0005;THETA=0.0005;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 2870399 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0031;AVGPOST=0.9983;RSQ=0.7862;ERATE=0.0004;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2870555 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0175;AVGPOST=0.9996;RSQ=0.9884;ERATE=0.0004;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 2870591 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0104;AVGPOST=0.9992;RSQ=0.9693;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 2870639 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7290;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2870657 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2870748 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0179;AVGPOST=0.9994;RSQ=0.9837;ERATE=0.0004;THETA=0.0009;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 2870811 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6777;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2870819 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7230;ERATE=0.0004;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2870850 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4086;AVGPOST=0.9978;RSQ=0.9965;ERATE=0.0004;THETA=0.0009;AC=892;AN=2184 GT:DS:GL:BD 0.40842491 0
1 2871013 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0038;AVGPOST=0.9990;RSQ=0.9044;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2871156 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0098;AVGPOST=0.9992;RSQ=0.9627;ERATE=0.0004;THETA=0.0007;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 2871182 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0026;AVGPOST=0.9991;RSQ=0.8431;ERATE=0.0005;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2871252 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8413;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2871423 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9205;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2871480 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8504;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2871491 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5831;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2871534 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.485;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.5519;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2871721 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7410;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2871863 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9385;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2871903 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6690;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2871906 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.4303;AVGPOST=0.9940;RSQ=0.9909;ERATE=0.0008;THETA=0.0003;AC=940;AN=2184 GT:DS:GL:BD 0.43040293 0
1 2871918 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.942;LDAF=0.0265;AVGPOST=0.9910;RSQ=0.8681;ERATE=0.0023;THETA=0.0004;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 2871955 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.5750;ERATE=0.0006;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2871981 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.629;LDAF=0.0024;AVGPOST=0.9969;RSQ=0.4677;ERATE=0.0013;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2871987 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0100;AVGPOST=0.9983;RSQ=0.9222;ERATE=0.0004;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2872012 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0027;AVGPOST=0.9974;RSQ=0.6516;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2872020 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.930;LDAF=0.0087;AVGPOST=0.9964;RSQ=0.8577;ERATE=0.0004;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2872074 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.761;LDAF=0.0026;AVGPOST=0.9975;RSQ=0.5773;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2872183 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9403;ERATE=0.0004;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2872305 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.866;LDAF=0.0108;AVGPOST=0.9953;RSQ=0.8303;ERATE=0.0004;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 2872336 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0023;AVGPOST=0.9995;RSQ=0.9094;ERATE=0.0004;THETA=0.0013;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2872424 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0087;AVGPOST=0.9989;RSQ=0.9427;ERATE=0.0004;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2872741 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.723;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6775;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2872808 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0175;AVGPOST=0.9992;RSQ=0.9771;ERATE=0.0004;THETA=0.0006;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 2872908 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0042;AVGPOST=0.9979;RSQ=0.8300;ERATE=0.0004;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2873185 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0024;AVGPOST=0.9971;RSQ=0.5918;ERATE=0.0005;THETA=0.0015;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2873236 . GAAAC G 40 PASS INDEL;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6213;ERATE=0.0004;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2873359 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0029;AVGPOST=0.9986;RSQ=0.7797;ERATE=0.0009;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2873369 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4245;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2873375 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.799;LDAF=0.0032;AVGPOST=0.9955;RSQ=0.4648;ERATE=0.0009;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2873485 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.4883;AVGPOST=0.9936;RSQ=0.9905;ERATE=0.0003;THETA=0.0006;AC=1069;AN=2184 GT:DS:GL:BD 0.48946887 0
1 2873505 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6467;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2873511 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0171;AVGPOST=0.9986;RSQ=0.9705;ERATE=0.0003;THETA=0.0007;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 2873652 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0199;AVGPOST=0.9995;RSQ=0.9892;ERATE=0.0004;THETA=0.0033;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 2874001 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0066;AVGPOST=0.9971;RSQ=0.8254;ERATE=0.0005;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2874081 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5506;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2874312 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.0079;AVGPOST=0.9986;RSQ=0.9267;ERATE=0.0004;THETA=0.0021;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2874430 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.940;LDAF=0.0084;AVGPOST=0.9986;RSQ=0.9303;ERATE=0.0004;THETA=0.0017;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2874471 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0036;AVGPOST=0.9989;RSQ=0.8874;ERATE=0.0005;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2874564 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0089;AVGPOST=0.9986;RSQ=0.9444;ERATE=0.0004;THETA=0.0031;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 2874745 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5569;ERATE=0.0005;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2874759 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.827;LDAF=0.0098;AVGPOST=0.9975;RSQ=0.8940;ERATE=0.0004;THETA=0.0010;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 2874808 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.755;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6248;ERATE=0.0006;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2875098 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0088;AVGPOST=0.9989;RSQ=0.9502;ERATE=0.0003;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 2875112 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5359;ERATE=0.0004;THETA=0.0036;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2875129 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.835;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8019;ERATE=0.0004;THETA=0.0039;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2875151 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.699;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.8227;ERATE=0.0010;THETA=0.0058;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2875158 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0004;THETA=0.0056;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2875216 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2875220 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.960;LDAF=0.9798;AVGPOST=0.9948;RSQ=0.8975;ERATE=0.0004;THETA=0.0016;AC=2142;AN=2184 GT:DS:GL:BD 0.98076922 1
1 2875313 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.848;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8640;ERATE=0.0004;THETA=0.0029;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2875325 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9282;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2875382 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0005;THETA=0.0030;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2875395 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8580;ERATE=0.0004;THETA=0.0018;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2875512 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0061;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2875518 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0073;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2875567 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0007;AVGPOST=0.9988;RSQ=0.3629;ERATE=0.0003;THETA=0.0034;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 2875593 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.674;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4578;ERATE=0.0004;THETA=0.0057;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2875688 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0028;AVGPOST=0.9997;RSQ=0.9489;ERATE=0.0003;THETA=0.0027;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2875705 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8468;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2875751 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0201;AVGPOST=0.9989;RSQ=0.9804;ERATE=0.0004;THETA=0.0007;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 2875906 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.940;LDAF=0.2980;AVGPOST=0.9656;RSQ=0.9408;ERATE=0.0046;THETA=0.0093;AC=650;AN=2184 GT:DS:GL:BD 0.29761904 0
1 2876137 . CG C 73 PASS INDEL;BAVGPOST=0.997;BRSQ=0.674;LDAF=0.0033;AVGPOST=0.9971;RSQ=0.6380;ERATE=0.0012;THETA=0.0110;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2876149 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0074;AVGPOST=0.9980;RSQ=0.8977;ERATE=0.0004;THETA=0.0069;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2876177 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8552;ERATE=0.0003;THETA=0.0019;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2876264 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.968;LDAF=0.0265;AVGPOST=0.9975;RSQ=0.9639;ERATE=0.0004;THETA=0.0026;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 2876276 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9804;ERATE=0.0003;THETA=0.0027;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2876300 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.816;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6558;ERATE=0.0003;THETA=0.0124;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2876308 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7149;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2876350 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0037;AVGPOST=0.9997;RSQ=0.9664;ERATE=0.0004;THETA=0.0035;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2876406 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0189;AVGPOST=0.9996;RSQ=0.9899;ERATE=0.0003;THETA=0.0026;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 2876474 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0035;AVGPOST=0.9985;RSQ=0.8246;ERATE=0.0004;THETA=0.0038;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2876525 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.978;LDAF=0.6438;AVGPOST=0.9752;RSQ=0.9619;ERATE=0.0004;THETA=0.0034;AC=1414;AN=2184 GT:DS:GL:BD 0.64743590 1
1 2876562 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.844;LDAF=0.0066;AVGPOST=0.9951;RSQ=0.7041;ERATE=0.0004;THETA=0.0021;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2876602 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.861;BRSQ=0.796;LDAF=0.4716;AVGPOST=0.8989;RSQ=0.8667;ERATE=0.0009;THETA=0.0016;AC=1073;AN=2184 GT:DS:GL:BD 0.49130037 0
1 2876620 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.717;BRSQ=0.503;LDAF=0.3573;AVGPOST=0.7843;RSQ=0.6909;ERATE=0.0031;THETA=0.0021;AC=820;AN=2184 GT:DS:GL:BD 0.37545788 0
1 2876650 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.840;BRSQ=0.209;LDAF=0.1497;AVGPOST=0.8143;RSQ=0.4098;ERATE=0.0104;THETA=0.0011;AC=186;AN=2184 GT:DS:GL:BD 0.08516484 0
1 2876651 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.784;BRSQ=0.182;LDAF=0.1975;AVGPOST=0.7633;RSQ=0.4426;ERATE=0.0120;THETA=0.0016;AC=286;AN=2184 GT:DS:GL:BD 0.13095239 0
1 2876661 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.393;LDAF=0.0373;AVGPOST=0.9527;RSQ=0.4726;ERATE=0.0030;THETA=0.0022;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 2876678 rs70938063 C CG 182 PASS INDEL;BAVGPOST=0.921;BRSQ=0.118;LDAF=0.0959;AVGPOST=0.8637;RSQ=0.3757;ERATE=0.0036;THETA=0.0007;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 2876692 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.823;BRSQ=0.145;LDAF=0.1709;AVGPOST=0.7686;RSQ=0.3634;ERATE=0.0087;THETA=0.0008;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 2876723 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.517;LDAF=0.0352;AVGPOST=0.9638;RSQ=0.5828;ERATE=0.0019;THETA=0.0025;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 2876753 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.481;LDAF=0.0331;AVGPOST=0.9856;RSQ=0.8236;ERATE=0.0020;THETA=0.0017;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 2876770 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.831;LDAF=0.0520;AVGPOST=0.9917;RSQ=0.9392;ERATE=0.0008;THETA=0.0012;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 2876771 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.959;BRSQ=0.833;LDAF=0.1226;AVGPOST=0.9562;RSQ=0.8562;ERATE=0.0058;THETA=0.0013;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 2876783 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0222;AVGPOST=0.9958;RSQ=0.9259;ERATE=0.0006;THETA=0.0010;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 2876814 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.847;LDAF=0.0073;AVGPOST=0.9960;RSQ=0.7787;ERATE=0.0006;THETA=0.0018;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 2877025 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0022;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2877056 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.738;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2877104 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0030;AVGPOST=0.9992;RSQ=0.8910;ERATE=0.0004;THETA=0.0056;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2877110 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.897;LDAF=0.0029;AVGPOST=0.9987;RSQ=0.8130;ERATE=0.0006;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2877125 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0162;AVGPOST=0.9991;RSQ=0.9746;ERATE=0.0004;THETA=0.0012;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 2877196 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0456;AVGPOST=0.9981;RSQ=0.9827;ERATE=0.0004;THETA=0.0014;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 2877319 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.698;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5790;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2877328 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0139;AVGPOST=0.9995;RSQ=0.9850;ERATE=0.0004;THETA=0.0012;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 2877368 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0295;AVGPOST=0.9987;RSQ=0.9805;ERATE=0.0004;THETA=0.0028;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 2877386 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0084;AVGPOST=0.9986;RSQ=0.9170;ERATE=0.0005;THETA=0.0012;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2877477 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.977;LDAF=0.1199;AVGPOST=0.9919;RSQ=0.9750;ERATE=0.0011;THETA=0.0016;AC=262;AN=2184 GT:DS:GL:BD 0.11996337 0
1 2877478 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5125;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2877593 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5225;ERATE=0.0004;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2877696 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9094;ERATE=0.0003;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2877824 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5165;ERATE=0.0004;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2877838 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.742;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.4979;ERATE=0.0005;THETA=0.0045;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2877849 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0145;AVGPOST=0.9983;RSQ=0.9579;ERATE=0.0004;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 2877913 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0322;AVGPOST=0.9979;RSQ=0.9787;ERATE=0.0004;THETA=0.0036;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 2877924 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0034;AVGPOST=0.9994;RSQ=0.9107;ERATE=0.0007;THETA=0.0013;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2877970 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6875;ERATE=0.0004;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2878220 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.779;LDAF=0.0033;AVGPOST=0.9979;RSQ=0.7565;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2878224 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.988;LDAF=0.0917;AVGPOST=0.9978;RSQ=0.9920;ERATE=0.0004;THETA=0.0010;AC=201;AN=2184 GT:DS:GL:BD 0.09203297 0
1 2878237 . C CTGGGGAGA 358 PASS INDEL;BAVGPOST=0.999;BRSQ=0.669;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.6161;ERATE=0.0005;THETA=0.0021;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2878250 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.983;LDAF=0.0958;AVGPOST=0.9941;RSQ=0.9824;ERATE=0.0004;THETA=0.0025;AC=207;AN=2184 GT:DS:GL:BD 0.09478022 0
1 2878283 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9364;ERATE=0.0004;THETA=0.0056;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2878304 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7462;ERATE=0.0003;THETA=0.0020;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2878307 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.984;LDAF=0.0949;AVGPOST=0.9961;RSQ=0.9869;ERATE=0.0004;THETA=0.0018;AC=206;AN=2184 GT:DS:GL:BD 0.09432235 0
1 2878323 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.971;LDAF=0.0519;AVGPOST=0.9968;RSQ=0.9779;ERATE=0.0004;THETA=0.0018;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 2878359 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7819;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2878366 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.959;BRSQ=0.935;LDAF=0.4445;AVGPOST=0.9588;RSQ=0.9405;ERATE=0.0011;THETA=0.0060;AC=967;AN=2184 GT:DS:GL:BD 0.44276556 0
1 2878408 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.867;LDAF=0.0030;AVGPOST=0.9993;RSQ=0.8922;ERATE=0.0003;THETA=0.0069;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2878409 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.751;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4752;ERATE=0.0004;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2878452 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.862;LDAF=0.0078;AVGPOST=0.9973;RSQ=0.8734;ERATE=0.0004;THETA=0.0138;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 2878491 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.977;LDAF=0.0169;AVGPOST=0.9989;RSQ=0.9694;ERATE=0.0004;THETA=0.0089;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 2878531 . C CGCTAA 155 PASS INDEL;BAVGPOST=0.998;BRSQ=0.550;LDAF=0.0037;AVGPOST=0.9944;RSQ=0.3592;ERATE=0.0010;THETA=0.0071;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2878541 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0080;AVGPOST=0.9995;RSQ=0.9706;ERATE=0.0003;THETA=0.0099;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2878571 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.648;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4295;ERATE=0.0004;THETA=0.0055;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2878710 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7247;ERATE=0.0004;THETA=0.0128;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2878831 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.528;LDAF=0.0025;AVGPOST=0.9978;RSQ=0.6381;ERATE=0.0005;THETA=0.0136;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2878872 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.713;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8472;ERATE=0.0004;THETA=0.0040;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2878897 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0015;AVGPOST=0.9985;RSQ=0.6662;ERATE=0.0004;THETA=0.0070;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2878907 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0039;AVGPOST=0.9985;RSQ=0.8558;ERATE=0.0005;THETA=0.0070;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2878908 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0056;AVGPOST=0.9996;RSQ=0.9688;ERATE=0.0003;THETA=0.0138;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2879074 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0141;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2879196 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.798;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0004;THETA=0.0103;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2879424 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.900;LDAF=0.0390;AVGPOST=0.9921;RSQ=0.9104;ERATE=0.0004;THETA=0.0214;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 2879449 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0114;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2879460 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.905;LDAF=0.1741;AVGPOST=0.9635;RSQ=0.9057;ERATE=0.0059;THETA=0.0160;AC=359;AN=2184 GT:DS:GL:BD 0.16437729 0
1 2879589 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6200;ERATE=0.0004;THETA=0.0369;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2879640 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.944;BRSQ=0.878;LDAF=0.2452;AVGPOST=0.9417;RSQ=0.8918;ERATE=0.0056;THETA=0.0200;AC=509;AN=2184 GT:DS:GL:BD 0.23305860 0
1 2879682 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7642;ERATE=0.0005;THETA=0.0210;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2879739 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.834;LDAF=0.0277;AVGPOST=0.9877;RSQ=0.8209;ERATE=0.0005;THETA=0.0093;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 2879806 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.945;LDAF=0.0251;AVGPOST=0.9973;RSQ=0.9568;ERATE=0.0005;THETA=0.0166;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 2879813 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0082;AVGPOST=0.9983;RSQ=0.9077;ERATE=0.0003;THETA=0.0120;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2879911 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0004;THETA=0.0034;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2879930 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.8033;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2880007 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0048;AVGPOST=0.9968;RSQ=0.7833;ERATE=0.0004;THETA=0.0067;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2880014 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.756;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5392;ERATE=0.0004;THETA=0.0155;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2880037 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0004;THETA=0.0149;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2880092 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0332;AVGPOST=0.9969;RSQ=0.9645;ERATE=0.0004;THETA=0.0084;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 2880123 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.951;LDAF=0.1170;AVGPOST=0.9848;RSQ=0.9436;ERATE=0.0006;THETA=0.0021;AC=251;AN=2184 GT:DS:GL:BD 0.11492674 0
1 2880126 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4760;ERATE=0.0005;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2880287 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0037;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2880353 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0045;AVGPOST=0.9987;RSQ=0.8903;ERATE=0.0003;THETA=0.0054;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2880362 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0138;AVGPOST=0.9990;RSQ=0.9738;ERATE=0.0004;THETA=0.0050;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 2880384 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.977;LDAF=0.2319;AVGPOST=0.9898;RSQ=0.9791;ERATE=0.0005;THETA=0.0016;AC=504;AN=2184 GT:DS:GL:BD 0.23076923 0
1 2880420 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0049;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2880532 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6223;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2880562 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7150;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2880600 . GTTTA G 83 PASS INDEL;BAVGPOST=0.999;BRSQ=0.758;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6205;ERATE=0.0007;THETA=0.0025;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2880672 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6620;ERATE=0.0004;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2880692 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0004;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2880709 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8844;ERATE=0.0003;THETA=0.0023;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2880871 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.7464;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2880984 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2881242 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0284;AVGPOST=0.9998;RSQ=0.9966;ERATE=0.0003;THETA=0.0011;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 2881289 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0037;AVGPOST=0.9994;RSQ=0.9281;ERATE=0.0008;THETA=0.0016;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2881297 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0052;AVGPOST=0.9996;RSQ=0.9667;ERATE=0.0003;THETA=0.0011;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2881425 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7330;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2881446 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9143;ERATE=0.0010;THETA=0.0017;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2881696 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2881716 . C CT 61 PASS INDEL;BAVGPOST=0.996;BRSQ=0.725;LDAF=0.0047;AVGPOST=0.9956;RSQ=0.6457;ERATE=0.0017;THETA=0.0012;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2881938 . T TTCA 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4108;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2882035 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.1946;AVGPOST=0.9949;RSQ=0.9888;ERATE=0.0004;THETA=0.0010;AC=424;AN=2184 GT:DS:GL:BD 0.19413920 0
1 2882169 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0496;AVGPOST=0.9993;RSQ=0.9945;ERATE=0.0003;THETA=0.0005;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 2882220 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2882394 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.8976;ERATE=0.0004;THETA=0.0022;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2882415 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.636;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2882483 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0071;AVGPOST=0.9979;RSQ=0.8839;ERATE=0.0004;THETA=0.0017;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2882558 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8118;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2882594 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7425;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2882652 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7494;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2882653 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2208;AVGPOST=0.9990;RSQ=0.9975;ERATE=0.0004;THETA=0.0002;AC=482;AN=2184 GT:DS:GL:BD 0.22069597 0
1 2882696 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0106;AVGPOST=0.9998;RSQ=0.9896;ERATE=0.0003;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 2882727 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8894;ERATE=0.0004;THETA=0.0018;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2882746 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8292;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2882831 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0235;AVGPOST=0.9989;RSQ=0.9796;ERATE=0.0003;THETA=0.0004;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 2882836 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.920;LDAF=0.0049;AVGPOST=0.9989;RSQ=0.9224;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2882887 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8303;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2883022 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0041;AVGPOST=0.9955;RSQ=0.6460;ERATE=0.0004;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2883041 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2922;AVGPOST=0.9984;RSQ=0.9967;ERATE=0.0006;THETA=0.0003;AC=638;AN=2184 GT:DS:GL:BD 0.29212454 0
1 2883087 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0054;AVGPOST=0.9991;RSQ=0.9256;ERATE=0.0004;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2883121 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.771;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5790;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2883137 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.962;BRSQ=0.948;LDAF=0.4934;AVGPOST=0.9610;RSQ=0.9519;ERATE=0.0012;THETA=0.0012;AC=1077;AN=2184 GT:DS:GL:BD 0.49313188 0
1 2883142 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0579;AVGPOST=0.9979;RSQ=0.9843;ERATE=0.0004;THETA=0.0007;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 2883164 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0124;AVGPOST=0.9996;RSQ=0.9853;ERATE=0.0003;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 2883170 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2883269 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.687;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7177;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2883313 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.688;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.4232;ERATE=0.0006;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2883582 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0042;AVGPOST=0.9979;RSQ=0.8047;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2883616 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.884;LDAF=0.0072;AVGPOST=0.9968;RSQ=0.8366;ERATE=0.0006;THETA=0.0011;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 2883625 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0248;AVGPOST=0.9983;RSQ=0.9706;ERATE=0.0003;THETA=0.0009;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 2883707 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0287;AVGPOST=0.9992;RSQ=0.9866;ERATE=0.0005;THETA=0.0007;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 2883758 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7390;ERATE=0.0004;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2883809 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6757;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2883858 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2179;AVGPOST=0.9980;RSQ=0.9954;ERATE=0.0006;THETA=0.0008;AC=475;AN=2184 GT:DS:GL:BD 0.21749084 0
1 2883892 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2883914 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0446;AVGPOST=0.9994;RSQ=0.9943;ERATE=0.0004;THETA=0.0008;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 2883932 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3032;AVGPOST=0.9968;RSQ=0.9945;ERATE=0.0005;THETA=0.0003;AC=662;AN=2184 GT:DS:GL:BD 0.30311355 0
1 2883985 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.753;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4009;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2884144 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2189;AVGPOST=0.9980;RSQ=0.9953;ERATE=0.0004;THETA=0.0008;AC=477;AN=2184 GT:DS:GL:BD 0.21840659 0
1 2884152 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.944;LDAF=0.0193;AVGPOST=0.9948;RSQ=0.9066;ERATE=0.0005;THETA=0.0006;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 2884243 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0051;AVGPOST=0.9997;RSQ=0.9701;ERATE=0.0003;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2884256 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.449;LDAF=0.9977;AVGPOST=0.9967;RSQ=0.4336;ERATE=0.0008;THETA=0.0010;AC=2182;AN=2184 GT:DS:GL:BD 0.99908423 1
1 2884318 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7802;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2884353 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0129;AVGPOST=0.9984;RSQ=0.9542;ERATE=0.0004;THETA=0.0006;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 2884425 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0445;AVGPOST=0.9989;RSQ=0.9891;ERATE=0.0006;THETA=0.0009;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 2884519 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6491;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2884521 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6629;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2884538 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0307;AVGPOST=0.9998;RSQ=0.9975;ERATE=0.0003;THETA=0.0006;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 2884552 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2490;AVGPOST=0.9978;RSQ=0.9954;ERATE=0.0004;THETA=0.0015;AC=543;AN=2184 GT:DS:GL:BD 0.24862637 0
1 2884571 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0124;AVGPOST=0.9993;RSQ=0.9757;ERATE=0.0003;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 2884587 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.993;LDAF=0.2926;AVGPOST=0.9974;RSQ=0.9950;ERATE=0.0004;THETA=0.0010;AC=640;AN=2184 GT:DS:GL:BD 0.29304031 0
1 2884634 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0115;AVGPOST=0.9980;RSQ=0.9282;ERATE=0.0005;THETA=0.0017;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 2884664 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0045;AVGPOST=0.9972;RSQ=0.7758;ERATE=0.0003;THETA=0.0022;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2884733 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0432;AVGPOST=0.9995;RSQ=0.9971;ERATE=0.0003;THETA=0.0025;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 2884794 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.880;LDAF=0.0038;AVGPOST=0.9988;RSQ=0.8814;ERATE=0.0004;THETA=0.0015;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2884815 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0106;AVGPOST=0.9998;RSQ=0.9898;ERATE=0.0003;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 2884920 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2885084 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.841;LDAF=0.0077;AVGPOST=0.9945;RSQ=0.7270;ERATE=0.0007;THETA=0.0019;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2885157 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0023;AVGPOST=0.9988;RSQ=0.7695;ERATE=0.0004;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2885214 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.740;LDAF=0.0031;AVGPOST=0.9975;RSQ=0.7097;ERATE=0.0003;THETA=0.0044;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2885266 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.538;LDAF=0.0018;AVGPOST=0.9974;RSQ=0.4747;ERATE=0.0004;THETA=0.0040;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2885283 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9375;ERATE=0.0003;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2885290 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0059;AVGPOST=0.9980;RSQ=0.8693;ERATE=0.0003;THETA=0.0045;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2885334 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0439;AVGPOST=0.9985;RSQ=0.9858;ERATE=0.0006;THETA=0.0019;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 2885358 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0308;AVGPOST=0.9992;RSQ=0.9899;ERATE=0.0003;THETA=0.0007;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 2885384 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.523;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4036;ERATE=0.0006;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2885399 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0488;AVGPOST=0.9972;RSQ=0.9783;ERATE=0.0005;THETA=0.0007;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 2885407 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.5067;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2885433 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0032;AVGPOST=0.9992;RSQ=0.8990;ERATE=0.0004;THETA=0.0035;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2885437 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.980;LDAF=0.0409;AVGPOST=0.9984;RSQ=0.9845;ERATE=0.0004;THETA=0.0008;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 2885438 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.821;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.7442;ERATE=0.0004;THETA=0.0046;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2885465 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0045;AVGPOST=0.9981;RSQ=0.8542;ERATE=0.0004;THETA=0.0013;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2885550 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0441;AVGPOST=0.9981;RSQ=0.9821;ERATE=0.0004;THETA=0.0053;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 2885692 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.692;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.5855;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2885855 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.599;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.5913;ERATE=0.0010;THETA=0.0044;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2885877 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.758;LDAF=0.0028;AVGPOST=0.9986;RSQ=0.7840;ERATE=0.0004;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2885878 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.688;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5098;ERATE=0.0005;THETA=0.0037;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2885949 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.767;LDAF=0.0021;AVGPOST=0.9981;RSQ=0.6039;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2886066 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0034;AVGPOST=0.9989;RSQ=0.8755;ERATE=0.0004;THETA=0.0045;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2886081 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7860;ERATE=0.0007;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2886090 . ACCTGGG A 92 PASS INDEL;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0037;AVGPOST=0.9975;RSQ=0.7049;ERATE=0.0006;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2886123 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.942;LDAF=0.3085;AVGPOST=0.9374;RSQ=0.8956;ERATE=0.0081;THETA=0.0055;AC=663;AN=2184 GT:DS:GL:BD 0.30357143 0
1 2886142 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.705;LDAF=0.0241;AVGPOST=0.9854;RSQ=0.7465;ERATE=0.0012;THETA=0.0039;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 2886165 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.974;LDAF=0.0211;AVGPOST=0.9952;RSQ=0.9080;ERATE=0.0005;THETA=0.0073;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 2886210 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0037;AVGPOST=0.9984;RSQ=0.8306;ERATE=0.0003;THETA=0.0027;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2886258 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0024;AVGPOST=0.9983;RSQ=0.6786;ERATE=0.0004;THETA=0.0017;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2886326 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.625;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4823;ERATE=0.0004;THETA=0.0047;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2886330 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7563;ERATE=0.0004;THETA=0.0165;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2886337 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0079;AVGPOST=0.9989;RSQ=0.9357;ERATE=0.0004;THETA=0.0092;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2886356 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.921;LDAF=0.8637;AVGPOST=0.9702;RSQ=0.9140;ERATE=0.0011;THETA=0.0224;AC=1893;AN=2184 GT:DS:GL:BD 0.86675823 1
1 2886389 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.884;LDAF=0.0909;AVGPOST=0.9759;RSQ=0.8887;ERATE=0.0009;THETA=0.0163;AC=185;AN=2184 GT:DS:GL:BD 0.08470696 0
1 2886446 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6010;ERATE=0.0004;THETA=0.0102;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2886466 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.883;LDAF=0.0928;AVGPOST=0.9675;RSQ=0.8641;ERATE=0.0018;THETA=0.0179;AC=187;AN=2184 GT:DS:GL:BD 0.08562271 0
1 2886467 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.786;LDAF=0.0019;AVGPOST=0.9991;RSQ=0.8010;ERATE=0.0004;THETA=0.0139;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2886642 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.776;LDAF=0.0081;AVGPOST=0.9935;RSQ=0.6690;ERATE=0.0011;THETA=0.0198;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2886716 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.774;LDAF=0.0049;AVGPOST=0.9963;RSQ=0.6691;ERATE=0.0007;THETA=0.0061;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2886804 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.958;BRSQ=0.810;LDAF=0.1136;AVGPOST=0.9537;RSQ=0.8309;ERATE=0.0013;THETA=0.0243;AC=226;AN=2184 GT:DS:GL:BD 0.10347985 0
1 2886874 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0027;AVGPOST=0.9989;RSQ=0.8217;ERATE=0.0004;THETA=0.0161;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2886903 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.884;LDAF=0.1156;AVGPOST=0.9735;RSQ=0.9145;ERATE=0.0021;THETA=0.0046;AC=238;AN=2184 GT:DS:GL:BD 0.10897436 0
1 2886951 . T TG 15517 PASS INDEL;BAVGPOST=0.997;BRSQ=0.325;LDAF=0.9983;AVGPOST=0.9966;RSQ=0.0929;ERATE=0.0004;THETA=0.0012;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 2886954 rs5772089 G GA 51757 PASS INDEL;BAVGPOST=1.000;BRSQ=0;LDAF=0.9952;AVGPOST=0.9938;RSQ=0.5064;ERATE=0.0009;THETA=0.0127;AC=2176;AN=2184 GT:DS:GL:BD 0.99633700 1
1 2886988 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.909;BRSQ=0.809;LDAF=0.2625;AVGPOST=0.9180;RSQ=0.8538;ERATE=0.0019;THETA=0.0100;AC=543;AN=2184 GT:DS:GL:BD 0.24862637 0
1 2886990 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.936;LDAF=0.0064;AVGPOST=0.9983;RSQ=0.9000;ERATE=0.0006;THETA=0.0089;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2887015 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.531;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7432;ERATE=0.0004;THETA=0.0111;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2887156 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.897;LDAF=0.0154;AVGPOST=0.9965;RSQ=0.9068;ERATE=0.0006;THETA=0.0137;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 2887167 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0043;AVGPOST=0.9936;RSQ=0.4268;ERATE=0.0005;THETA=0.0087;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2887220 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.792;LDAF=0.0207;AVGPOST=0.9946;RSQ=0.8968;ERATE=0.0004;THETA=0.0054;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 2887225 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0024;AVGPOST=0.9984;RSQ=0.7073;ERATE=0.0004;THETA=0.0075;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2887378 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0542;AVGPOST=0.9928;RSQ=0.9473;ERATE=0.0007;THETA=0.0038;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 2887418 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.989;LDAF=0.5334;AVGPOST=0.9842;RSQ=0.9778;ERATE=0.0006;THETA=0.0020;AC=1163;AN=2184 GT:DS:GL:BD 0.53250915 1
1 2887437 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.575;LDAF=0.0028;AVGPOST=0.9959;RSQ=0.4242;ERATE=0.0009;THETA=0.0023;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2887448 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0092;AVGPOST=0.9938;RSQ=0.7320;ERATE=0.0012;THETA=0.0052;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2887469 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.980;LDAF=0.6206;AVGPOST=0.9715;RSQ=0.9595;ERATE=0.0051;THETA=0.0007;AC=1360;AN=2184 GT:DS:GL:BD 0.62271065 1
1 2887501 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0078;AVGPOST=0.9968;RSQ=0.8384;ERATE=0.0007;THETA=0.0009;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 2887566 . C CA 5190 PASS INDEL;BAVGPOST=0.841;BRSQ=0.723;LDAF=0.4127;AVGPOST=0.8425;RSQ=0.7716;ERATE=0.0122;THETA=0.0005;AC=964;AN=2184 GT:DS:GL:BD 0.44139194 0
1 2887674 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.767;LDAF=0.0022;AVGPOST=0.9980;RSQ=0.5941;ERATE=0.0006;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2887675 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.991;LDAF=0.5255;AVGPOST=0.9888;RSQ=0.9845;ERATE=0.0012;THETA=0.0004;AC=1149;AN=2184 GT:DS:GL:BD 0.52609891 1
1 2887855 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.971;LDAF=0.0391;AVGPOST=0.9955;RSQ=0.9613;ERATE=0.0004;THETA=0.0004;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 2887875 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.953;LDAF=0.0767;AVGPOST=0.9922;RSQ=0.9594;ERATE=0.0005;THETA=0.0005;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 2887886 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.6631;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2887892 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.777;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2887893 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.771;LDAF=0.0021;AVGPOST=0.9976;RSQ=0.5077;ERATE=0.0007;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2887895 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0023;AVGPOST=0.9964;RSQ=0.3257;ERATE=0.0009;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2887935 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.980;LDAF=0.0839;AVGPOST=0.9947;RSQ=0.9735;ERATE=0.0005;THETA=0.0006;AC=182;AN=2184 GT:DS:GL:BD 0.08333334 0
1 2888019 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.943;BRSQ=0.862;LDAF=0.1931;AVGPOST=0.9586;RSQ=0.9077;ERATE=0.0008;THETA=0.0005;AC=410;AN=2184 GT:DS:GL:BD 0.18772894 0
1 2888137 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6445;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2888192 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.762;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5223;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2888235 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.739;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8441;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2888238 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.0045;AVGPOST=0.9973;RSQ=0.8204;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2888339 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.944;LDAF=0.0150;AVGPOST=0.9979;RSQ=0.9403;ERATE=0.0006;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 2888402 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.983;LDAF=0.0758;AVGPOST=0.9978;RSQ=0.9880;ERATE=0.0004;THETA=0.0007;AC=165;AN=2184 GT:DS:GL:BD 0.07554945 0
1 2888442 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0118;AVGPOST=0.9989;RSQ=0.9619;ERATE=0.0004;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 2888461 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.979;LDAF=0.8569;AVGPOST=0.9929;RSQ=0.9783;ERATE=0.0004;THETA=0.0005;AC=1872;AN=2184 GT:DS:GL:BD 0.85714287 1
1 2888513 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.495;LDAF=0.0032;AVGPOST=0.9967;RSQ=0.5913;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2888514 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.970;LDAF=0.8673;AVGPOST=0.9793;RSQ=0.9277;ERATE=0.0017;THETA=0.0005;AC=1898;AN=2184 GT:DS:GL:BD 0.86904764 1
1 2888662 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0089;AVGPOST=0.9985;RSQ=0.9220;ERATE=0.0006;THETA=0.0008;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2888688 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.943;LDAF=0.0146;AVGPOST=0.9989;RSQ=0.9684;ERATE=0.0003;THETA=0.0007;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 2889046 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.825;LDAF=0.0267;AVGPOST=0.9851;RSQ=0.7706;ERATE=0.0011;THETA=0.0021;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 2889105 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.982;LDAF=0.0764;AVGPOST=0.9957;RSQ=0.9762;ERATE=0.0004;THETA=0.0004;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 2889115 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.482;LDAF=0.0024;AVGPOST=0.9973;RSQ=0.5204;ERATE=0.0005;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2889122 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.962;LDAF=0.0869;AVGPOST=0.9955;RSQ=0.9824;ERATE=0.0004;THETA=0.0010;AC=190;AN=2184 GT:DS:GL:BD 0.08699634 0
1 2889148 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.979;LDAF=0.7884;AVGPOST=0.9929;RSQ=0.9826;ERATE=0.0005;THETA=0.0004;AC=1720;AN=2184 GT:DS:GL:BD 0.78754580 1
1 2889159 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.983;LDAF=0.0654;AVGPOST=0.9950;RSQ=0.9696;ERATE=0.0006;THETA=0.0010;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 2889190 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.649;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.3527;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2889211 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.618;LDAF=0.0047;AVGPOST=0.9924;RSQ=0.3331;ERATE=0.0011;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2889238 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.756;LDAF=0.0026;AVGPOST=0.9976;RSQ=0.6087;ERATE=0.0012;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2889247 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0540;AVGPOST=0.9984;RSQ=0.9868;ERATE=0.0004;THETA=0.0009;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 2889284 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0030;AVGPOST=0.9984;RSQ=0.7930;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2889417 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.848;LDAF=0.0098;AVGPOST=0.9967;RSQ=0.8430;ERATE=0.0007;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2889490 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.680;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.7664;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2889535 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0539;AVGPOST=0.9986;RSQ=0.9890;ERATE=0.0003;THETA=0.0003;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 2889549 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.811;LDAF=0.9929;AVGPOST=0.9975;RSQ=0.8485;ERATE=0.0005;THETA=0.0005;AC=2170;AN=2184 GT:DS:GL:BD 0.99358976 1
1 2889577 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.7013;AVGPOST=0.9945;RSQ=0.9905;ERATE=0.0005;THETA=0.0008;AC=1529;AN=2184 GT:DS:GL:BD 0.70009160 1
1 2889587 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.715;LDAF=0.0018;AVGPOST=0.9985;RSQ=0.6370;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2889663 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.890;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9497;ERATE=0.0003;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2889706 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.507;LDAF=0.0033;AVGPOST=0.9974;RSQ=0.6678;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2889707 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.665;LDAF=0.0075;AVGPOST=0.9961;RSQ=0.8009;ERATE=0.0007;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2889726 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.969;LDAF=0.0291;AVGPOST=0.9978;RSQ=0.9675;ERATE=0.0004;THETA=0.0005;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 2889815 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.616;LDAF=0.0023;AVGPOST=0.9987;RSQ=0.7488;ERATE=0.0005;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2889822 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.3683;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2889868 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0084;AVGPOST=0.9973;RSQ=0.8613;ERATE=0.0006;THETA=0.0012;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2889968 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0087;AVGPOST=0.9990;RSQ=0.9456;ERATE=0.0005;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2889971 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.572;LDAF=0.0033;AVGPOST=0.9965;RSQ=0.5973;ERATE=0.0006;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2890234 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0115;AVGPOST=0.9985;RSQ=0.9470;ERATE=0.0004;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 2890257 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5703;ERATE=0.0005;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2890287 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5229;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2890310 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.707;LDAF=0.0024;AVGPOST=0.9972;RSQ=0.4923;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2890345 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.5293;AVGPOST=0.9859;RSQ=0.9799;ERATE=0.0018;THETA=0.0007;AC=1155;AN=2184 GT:DS:GL:BD 0.52884614 1
1 2890437 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.688;LDAF=0.0208;AVGPOST=0.9879;RSQ=0.7515;ERATE=0.0008;THETA=0.0005;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 2890446 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.748;LDAF=0.0023;AVGPOST=0.9974;RSQ=0.5528;ERATE=0.0006;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2890579 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.763;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5372;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2890615 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.688;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6474;ERATE=0.0007;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2890714 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.5280;AVGPOST=0.9954;RSQ=0.9937;ERATE=0.0006;THETA=0.0050;AC=1150;AN=2184 GT:DS:GL:BD 0.52655679 1
1 2890899 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.721;LDAF=0.0062;AVGPOST=0.9944;RSQ=0.6700;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2890919 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.945;LDAF=0.0354;AVGPOST=0.9974;RSQ=0.9742;ERATE=0.0003;THETA=0.0016;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 2890954 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.971;LDAF=0.5160;AVGPOST=0.9911;RSQ=0.9875;ERATE=0.0007;THETA=0.0008;AC=1128;AN=2184 GT:DS:GL:BD 0.51648355 1
1 2891076 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0546;AVGPOST=0.9984;RSQ=0.9880;ERATE=0.0004;THETA=0.0005;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 2891115 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.965;LDAF=0.8209;AVGPOST=0.9868;RSQ=0.9670;ERATE=0.0006;THETA=0.0004;AC=1794;AN=2184 GT:DS:GL:BD 0.82142860 1
1 2891128 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5305;AVGPOST=0.9935;RSQ=0.9911;ERATE=0.0007;THETA=0.0006;AC=1156;AN=2184 GT:DS:GL:BD 0.52930403 1
1 2891129 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.959;LDAF=0.2026;AVGPOST=0.9855;RSQ=0.9693;ERATE=0.0009;THETA=0.0078;AC=446;AN=2184 GT:DS:GL:BD 0.20421246 0
1 2891169 . ACGCG A 411 PASS INDEL;BAVGPOST=0.999;BRSQ=0.766;LDAF=0.0085;AVGPOST=0.9908;RSQ=0.4985;ERATE=0.0013;THETA=0.0048;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2891170 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.829;BRSQ=0.315;LDAF=0.2013;AVGPOST=0.7597;RSQ=0.3476;ERATE=0.0392;THETA=0.0018;AC=213;AN=2184 GT:DS:GL:BD 0.09752747 0
1 2891192 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.799;BRSQ=0.438;LDAF=0.2941;AVGPOST=0.7601;RSQ=0.4438;ERATE=0.0417;THETA=0.0048;AC=483;AN=2184 GT:DS:GL:BD 0.22115384 0
1 2891225 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.965;BRSQ=0.828;LDAF=0.1245;AVGPOST=0.9365;RSQ=0.7657;ERATE=0.0142;THETA=0.0006;AC=239;AN=2184 GT:DS:GL:BD 0.10943224 0
1 2891247 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.866;LDAF=0.1548;AVGPOST=0.9523;RSQ=0.8456;ERATE=0.0108;THETA=0.0004;AC=326;AN=2184 GT:DS:GL:BD 0.14926741 0
1 2891254 . G GT 13657 PASS INDEL;BAVGPOST=0.763;BRSQ=0.567;LDAF=0.3049;AVGPOST=0.7973;RSQ=0.6369;ERATE=0.0246;THETA=0.0009;AC=610;AN=2184 GT:DS:GL:BD 0.27930403 0
1 2891258 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.915;BRSQ=0.779;LDAF=0.3678;AVGPOST=0.8053;RSQ=0.6013;ERATE=0.0537;THETA=0.0004;AC=680;AN=2184 GT:DS:GL:BD 0.31135532 0
1 2891279 . AC A 8613 PASS INDEL;BAVGPOST=0.843;BRSQ=0.750;LDAF=0.4145;AVGPOST=0.8745;RSQ=0.8394;ERATE=0.0025;THETA=0.0009;AC=940;AN=2184 GT:DS:GL:BD 0.43040293 0
1 2891283 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.860;BRSQ=0.781;LDAF=0.4354;AVGPOST=0.8944;RSQ=0.8711;ERATE=0.0013;THETA=0.0011;AC=979;AN=2184 GT:DS:GL:BD 0.44826007 0
1 2891294 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6016;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2891298 . GT G 73 PASS INDEL;BAVGPOST=0.992;BRSQ=0.606;LDAF=0.0205;AVGPOST=0.9742;RSQ=0.4922;ERATE=0.0046;THETA=0.0007;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2891328 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.600;LDAF=0.0295;AVGPOST=0.9679;RSQ=0.5602;ERATE=0.0081;THETA=0.0009;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 2891332 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.685;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4199;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2891348 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.939;LDAF=0.0224;AVGPOST=0.9976;RSQ=0.9552;ERATE=0.0005;THETA=0.0005;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 2891359 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.596;LDAF=0.0052;AVGPOST=0.9929;RSQ=0.5079;ERATE=0.0013;THETA=0.0041;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2891405 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0086;AVGPOST=0.9974;RSQ=0.8750;ERATE=0.0006;THETA=0.0009;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2891413 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4595;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2891512 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.769;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8019;ERATE=0.0005;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2891517 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.525;LDAF=0.0042;AVGPOST=0.9952;RSQ=0.5246;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2891586 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5309;AVGPOST=0.9899;RSQ=0.9863;ERATE=0.0017;THETA=0.0016;AC=1156;AN=2184 GT:DS:GL:BD 0.52930403 1
1 2891691 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0062;AVGPOST=0.9986;RSQ=0.8965;ERATE=0.0006;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2891708 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0077;AVGPOST=0.9984;RSQ=0.9002;ERATE=0.0004;THETA=0.0051;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2891713 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.985;LDAF=0.5284;AVGPOST=0.9778;RSQ=0.9711;ERATE=0.0029;THETA=0.0037;AC=1151;AN=2184 GT:DS:GL:BD 0.52701467 1
1 2891801 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0057;AVGPOST=0.9995;RSQ=0.9595;ERATE=0.0003;THETA=0.0040;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2891916 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0057;AVGPOST=0.9995;RSQ=0.9616;ERATE=0.0004;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2892096 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0059;AVGPOST=0.9993;RSQ=0.9416;ERATE=0.0005;THETA=0.0015;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2892100 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0061;AVGPOST=0.9987;RSQ=0.9001;ERATE=0.0005;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2892199 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.774;LDAF=0.0063;AVGPOST=0.9974;RSQ=0.8328;ERATE=0.0008;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2892253 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0015;AVGPOST=0.9985;RSQ=0.5534;ERATE=0.0006;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2892280 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0032;AVGPOST=0.9968;RSQ=0.5902;ERATE=0.0006;THETA=0.0064;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2892357 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0058;AVGPOST=0.9993;RSQ=0.9430;ERATE=0.0004;THETA=0.0016;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2892378 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.724;LDAF=0.0093;AVGPOST=0.9968;RSQ=0.8583;ERATE=0.0005;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2892400 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.659;LDAF=0.0059;AVGPOST=0.9973;RSQ=0.8079;ERATE=0.0006;THETA=0.0011;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2892443 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5817;ERATE=0.0004;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2892605 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2892748 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5994;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2892808 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.669;LDAF=0.0018;AVGPOST=0.9980;RSQ=0.5433;ERATE=0.0006;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2892827 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2892924 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.5476;AVGPOST=0.9904;RSQ=0.9866;ERATE=0.0006;THETA=0.0005;AC=1194;AN=2184 GT:DS:GL:BD 0.54670328 1
1 2892979 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.760;LDAF=0.0352;AVGPOST=0.9750;RSQ=0.7288;ERATE=0.0071;THETA=0.0006;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 2893093 . G GA 942 PASS INDEL;BAVGPOST=0.976;BRSQ=0.740;LDAF=0.0434;AVGPOST=0.9790;RSQ=0.8234;ERATE=0.0010;THETA=0.0032;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 2893520 . T TGG 136 PASS INDEL;BAVGPOST=0.983;BRSQ=0.466;LDAF=0.0254;AVGPOST=0.9699;RSQ=0.4860;ERATE=0.0067;THETA=0.0029;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2893581 . TG T 326 PASS INDEL;BAVGPOST=0.846;BRSQ=0.157;LDAF=0.2008;AVGPOST=0.7076;RSQ=0.2349;ERATE=0.0301;THETA=0.0006;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 2893661 . A ATG 555 PASS INDEL;BAVGPOST=0.991;BRSQ=0.387;LDAF=0.0079;AVGPOST=0.9906;RSQ=0.5120;ERATE=0.0012;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2893709 . T TG 53 PASS INDEL;BAVGPOST=0.977;BRSQ=0.345;LDAF=0.0444;AVGPOST=0.9327;RSQ=0.3497;ERATE=0.0069;THETA=0.0013;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 2893746 . G GGT 121 PASS INDEL;BAVGPOST=0.993;BRSQ=0.541;LDAF=0.0148;AVGPOST=0.9803;RSQ=0.4373;ERATE=0.0037;THETA=0.0014;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2893864 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.894;LDAF=0.0328;AVGPOST=0.9929;RSQ=0.9212;ERATE=0.0007;THETA=0.0007;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 2893941 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.874;BRSQ=0.740;LDAF=0.6034;AVGPOST=0.8109;RSQ=0.6653;ERATE=0.0434;THETA=0.0029;AC=1364;AN=2184 GT:DS:GL:BD 0.62454212 1
1 2893961 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.837;BRSQ=0.663;LDAF=0.6039;AVGPOST=0.7638;RSQ=0.5686;ERATE=0.0426;THETA=0.0008;AC=1402;AN=2184 GT:DS:GL:BD 0.64194137 1
1 2893969 . T TG 1027 PASS INDEL;BAVGPOST=0.814;BRSQ=0.267;LDAF=0.2102;AVGPOST=0.7428;RSQ=0.3442;ERATE=0.0339;THETA=0.0010;AC=220;AN=2184 GT:DS:GL:BD 0.10073260 0
1 2893989 . G GT 162 PASS INDEL;BAVGPOST=0.954;BRSQ=0.255;LDAF=0.0700;AVGPOST=0.9058;RSQ=0.4078;ERATE=0.0056;THETA=0.0013;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 2894028 . T TG 1336 PASS INDEL;BAVGPOST=0.754;BRSQ=0.242;LDAF=0.2458;AVGPOST=0.7127;RSQ=0.3501;ERATE=0.0369;THETA=0.0007;AC=282;AN=2184 GT:DS:GL:BD 0.12912089 0
1 2894060 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.593;BRSQ=0.203;LDAF=0.3420;AVGPOST=0.6699;RSQ=0.3979;ERATE=0.0249;THETA=0.0021;AC=569;AN=2184 GT:DS:GL:BD 0.26053113 0
1 2894080 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.598;BRSQ=0.238;LDAF=0.5820;AVGPOST=0.6510;RSQ=0.3641;ERATE=0.0436;THETA=0.0006;AC=1372;AN=2184 GT:DS:GL:BD 0.62820512 1
1 2894237 . TG T 202 PASS INDEL;BAVGPOST=0.994;BRSQ=0.589;LDAF=0.0094;AVGPOST=0.9893;RSQ=0.5141;ERATE=0.0009;THETA=0.0017;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2894318 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.821;LDAF=0.0299;AVGPOST=0.9960;RSQ=0.9518;ERATE=0.0006;THETA=0.0005;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 2894324 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.947;BRSQ=0.701;LDAF=0.0999;AVGPOST=0.9521;RSQ=0.7930;ERATE=0.0076;THETA=0.0008;AC=198;AN=2184 GT:DS:GL:BD 0.09065934 0
1 2894332 . T TG 170 PASS INDEL;BAVGPOST=0.964;BRSQ=0.390;LDAF=0.0584;AVGPOST=0.9192;RSQ=0.3948;ERATE=0.0126;THETA=0.0008;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 2894375 . G GA 43 PASS INDEL;BAVGPOST=0.989;BRSQ=0.464;LDAF=0.0192;AVGPOST=0.9770;RSQ=0.5007;ERATE=0.0033;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 2894447 . GA G 2346 PASS INDEL;BAVGPOST=0.995;BRSQ=0.899;LDAF=0.0210;AVGPOST=0.9931;RSQ=0.8695;ERATE=0.0006;THETA=0.0006;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 2894465 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.5467;AVGPOST=0.9945;RSQ=0.9914;ERATE=0.0009;THETA=0.0022;AC=1193;AN=2184 GT:DS:GL:BD 0.54624540 1
1 2894470 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.979;LDAF=0.0440;AVGPOST=0.9968;RSQ=0.9733;ERATE=0.0005;THETA=0.0010;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 2894574 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0037;AVGPOST=0.9984;RSQ=0.8298;ERATE=0.0004;THETA=0.0014;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2894632 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.881;LDAF=0.0779;AVGPOST=0.9760;RSQ=0.8837;ERATE=0.0008;THETA=0.0009;AC=158;AN=2184 GT:DS:GL:BD 0.07234433 0
1 2894651 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2894697 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5854;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2894753 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.716;LDAF=0.0029;AVGPOST=0.9981;RSQ=0.7751;ERATE=0.0005;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2894830 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.564;LDAF=0.0021;AVGPOST=0.9974;RSQ=0.5546;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2894884 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.5471;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2894910 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.977;LDAF=0.1574;AVGPOST=0.9944;RSQ=0.9844;ERATE=0.0004;THETA=0.0004;AC=345;AN=2184 GT:DS:GL:BD 0.15796703 0
1 2895106 . GCCT G 191 PASS INDEL;BAVGPOST=0.999;BRSQ=0.604;LDAF=0.0033;AVGPOST=0.9959;RSQ=0.4512;ERATE=0.0007;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2895164 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.795;LDAF=0.0194;AVGPOST=0.9936;RSQ=0.8703;ERATE=0.0007;THETA=0.0006;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 2895176 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.877;LDAF=0.0297;AVGPOST=0.9958;RSQ=0.9449;ERATE=0.0006;THETA=0.0010;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 2895200 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.5479;AVGPOST=0.9897;RSQ=0.9845;ERATE=0.0011;THETA=0.0006;AC=1195;AN=2184 GT:DS:GL:BD 0.54716116 1
1 2895227 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.814;LDAF=0.0068;AVGPOST=0.9975;RSQ=0.8550;ERATE=0.0005;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2895477 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.543;LDAF=0.0034;AVGPOST=0.9957;RSQ=0.4679;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2895482 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.691;LDAF=0.0136;AVGPOST=0.9946;RSQ=0.8453;ERATE=0.0004;THETA=0.0009;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 2895499 . GCCT G 68 PASS INDEL;BAVGPOST=0.998;BRSQ=0.443;LDAF=0.0086;AVGPOST=0.9843;RSQ=0.2741;ERATE=0.0009;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2895553 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.932;BRSQ=0.869;LDAF=0.2772;AVGPOST=0.9521;RSQ=0.9163;ERATE=0.0009;THETA=0.0008;AC=591;AN=2184 GT:DS:GL:BD 0.27060440 0
1 2895567 . TC T 2144 PASS INDEL;BAVGPOST=0.990;BRSQ=0.912;LDAF=0.0547;AVGPOST=0.9949;RSQ=0.9600;ERATE=0.0007;THETA=0.0005;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 2895762 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.861;LDAF=0.0062;AVGPOST=0.9984;RSQ=0.8922;ERATE=0.0004;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2895806 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.956;LDAF=0.4988;AVGPOST=0.9789;RSQ=0.9731;ERATE=0.0008;THETA=0.0005;AC=1086;AN=2184 GT:DS:GL:BD 0.49725273 0
1 2895816 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.863;LDAF=0.0077;AVGPOST=0.9954;RSQ=0.7422;ERATE=0.0007;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2895865 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5436;AVGPOST=0.9957;RSQ=0.9932;ERATE=0.0006;THETA=0.0014;AC=1185;AN=2184 GT:DS:GL:BD 0.54258239 1
1 2895905 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.0045;AVGPOST=0.9989;RSQ=0.8963;ERATE=0.0005;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2896052 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.5433;AVGPOST=0.9948;RSQ=0.9923;ERATE=0.0007;THETA=0.0007;AC=1184;AN=2184 GT:DS:GL:BD 0.54212457 1
1 2896066 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0032;AVGPOST=0.9989;RSQ=0.8490;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2896106 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.963;LDAF=0.0718;AVGPOST=0.9924;RSQ=0.9594;ERATE=0.0006;THETA=0.0018;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 2896197 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5438;AVGPOST=0.9957;RSQ=0.9938;ERATE=0.0005;THETA=0.0021;AC=1184;AN=2184 GT:DS:GL:BD 0.54212457 1
1 2896200 . ACAGCGGC A 1524 PASS INDEL;BAVGPOST=0.997;BRSQ=0.861;LDAF=0.0063;AVGPOST=0.9983;RSQ=0.8608;ERATE=0.0006;THETA=0.0032;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2896278 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.660;LDAF=0.0027;AVGPOST=0.9978;RSQ=0.6378;ERATE=0.0006;THETA=0.0044;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2896285 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.901;LDAF=0.0058;AVGPOST=0.9985;RSQ=0.8814;ERATE=0.0004;THETA=0.0024;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2896419 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.744;LDAF=0.0054;AVGPOST=0.9955;RSQ=0.6789;ERATE=0.0007;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2896466 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.712;LDAF=0.0031;AVGPOST=0.9954;RSQ=0.4429;ERATE=0.0004;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2896508 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.985;LDAF=0.6127;AVGPOST=0.9905;RSQ=0.9861;ERATE=0.0007;THETA=0.0105;AC=1334;AN=2184 GT:DS:GL:BD 0.61080587 1
1 2896609 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4912;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2896637 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.754;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6250;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2896732 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.979;LDAF=0.0385;AVGPOST=0.9979;RSQ=0.9798;ERATE=0.0004;THETA=0.0029;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 2896735 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.974;LDAF=0.7361;AVGPOST=0.9873;RSQ=0.9781;ERATE=0.0006;THETA=0.0010;AC=1602;AN=2184 GT:DS:GL:BD 0.73351645 1
1 2896779 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.766;LDAF=0.0081;AVGPOST=0.9963;RSQ=0.8100;ERATE=0.0006;THETA=0.0064;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 2896784 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.955;LDAF=0.0670;AVGPOST=0.9918;RSQ=0.9547;ERATE=0.0006;THETA=0.0135;AC=144;AN=2184 GT:DS:GL:BD 0.06593407 0
1 2896829 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.741;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5766;ERATE=0.0004;THETA=0.0074;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2896891 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5826;ERATE=0.0005;THETA=0.0081;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2896928 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.753;LDAF=0.0027;AVGPOST=0.9982;RSQ=0.7402;ERATE=0.0006;THETA=0.0034;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2896978 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.6970;ERATE=0.0003;THETA=0.0025;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2896992 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.760;LDAF=0.0032;AVGPOST=0.9976;RSQ=0.6930;ERATE=0.0004;THETA=0.0102;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2896993 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2897023 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.769;LDAF=0.0023;AVGPOST=0.9982;RSQ=0.6849;ERATE=0.0007;THETA=0.0087;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2897045 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.691;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5512;ERATE=0.0005;THETA=0.0100;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2897084 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.961;BRSQ=0.897;LDAF=0.7989;AVGPOST=0.9617;RSQ=0.9160;ERATE=0.0008;THETA=0.0023;AC=1752;AN=2184 GT:DS:GL:BD 0.80219781 1
1 2897093 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.914;BRSQ=0.861;LDAF=0.5571;AVGPOST=0.9073;RSQ=0.8698;ERATE=0.0123;THETA=0.0121;AC=1224;AN=2184 GT:DS:GL:BD 0.56043959 1
1 2897102 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.968;LDAF=0.0374;AVGPOST=0.9942;RSQ=0.9494;ERATE=0.0004;THETA=0.0087;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 2897169 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.874;LDAF=0.0327;AVGPOST=0.9861;RSQ=0.8328;ERATE=0.0022;THETA=0.0114;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 2897271 . AG A 47 PASS INDEL;BAVGPOST=0.999;BRSQ=0.587;LDAF=0.0065;AVGPOST=0.9900;RSQ=0.4119;ERATE=0.0012;THETA=0.0126;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2897294 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.696;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4169;ERATE=0.0004;THETA=0.0103;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2897372 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.393;LDAF=0.0032;AVGPOST=0.9979;RSQ=0.7103;ERATE=0.0005;THETA=0.0113;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2897414 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.705;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6432;ERATE=0.0004;THETA=0.0143;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2897455 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.909;BRSQ=0.814;LDAF=0.7397;AVGPOST=0.9012;RSQ=0.8186;ERATE=0.0052;THETA=0.0009;AC=1646;AN=2184 GT:DS:GL:BD 0.75366300 1
1 2897465 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.897;BRSQ=0.737;LDAF=0.7752;AVGPOST=0.8755;RSQ=0.7318;ERATE=0.0094;THETA=0.0058;AC=1741;AN=2184 GT:DS:GL:BD 0.79716116 1
1 2897474 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.748;LDAF=0.0205;AVGPOST=0.9866;RSQ=0.7593;ERATE=0.0005;THETA=0.0195;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 2897537 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.651;LDAF=0.0116;AVGPOST=0.9872;RSQ=0.5574;ERATE=0.0011;THETA=0.0110;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2897556 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.847;LDAF=0.0091;AVGPOST=0.9947;RSQ=0.7477;ERATE=0.0004;THETA=0.0022;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2897579 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.933;BRSQ=0.514;LDAF=0.0878;AVGPOST=0.9038;RSQ=0.5150;ERATE=0.0149;THETA=0.0044;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 2897586 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.900;BRSQ=0.599;LDAF=0.1343;AVGPOST=0.9057;RSQ=0.7078;ERATE=0.0024;THETA=0.0012;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 2897594 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.816;BRSQ=0.626;LDAF=0.5766;AVGPOST=0.8029;RSQ=0.6526;ERATE=0.0499;THETA=0.0043;AC=1311;AN=2184 GT:DS:GL:BD 0.60027474 1
1 2897609 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.859;BRSQ=0.613;LDAF=0.2707;AVGPOST=0.8444;RSQ=0.6373;ERATE=0.0444;THETA=0.0078;AC=496;AN=2184 GT:DS:GL:BD 0.22710623 0
1 2897616 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.891;BRSQ=0.817;LDAF=0.4577;AVGPOST=0.8691;RSQ=0.8218;ERATE=0.0163;THETA=0.0083;AC=1017;AN=2184 GT:DS:GL:BD 0.46565935 0
1 2897624 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.950;BRSQ=0.683;LDAF=0.0998;AVGPOST=0.9278;RSQ=0.6812;ERATE=0.0160;THETA=0.0186;AC=172;AN=2184 GT:DS:GL:BD 0.07875458 0
1 2897707 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.917;BRSQ=0.859;LDAF=0.5792;AVGPOST=0.9099;RSQ=0.8708;ERATE=0.0105;THETA=0.0022;AC=1263;AN=2184 GT:DS:GL:BD 0.57829672 1
1 2897751 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6583;ERATE=0.0005;THETA=0.0094;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2897770 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0063;AVGPOST=0.9982;RSQ=0.8751;ERATE=0.0005;THETA=0.0014;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2897811 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6660;ERATE=0.0005;THETA=0.0097;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2897850 . GC G 9806 PASS INDEL;BAVGPOST=0.951;BRSQ=0.851;LDAF=0.1625;AVGPOST=0.9351;RSQ=0.8345;ERATE=0.0075;THETA=0.0034;AC=328;AN=2184 GT:DS:GL:BD 0.15018316 0
1 2897855 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.780;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.3985;ERATE=0.0004;THETA=0.0155;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2897876 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.936;BRSQ=0.835;LDAF=0.1899;AVGPOST=0.9321;RSQ=0.8399;ERATE=0.0052;THETA=0.0124;AC=385;AN=2184 GT:DS:GL:BD 0.17628205 0
1 2897904 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.930;BRSQ=0.883;LDAF=0.3340;AVGPOST=0.9092;RSQ=0.8679;ERATE=0.0023;THETA=0.0188;AC=710;AN=2184 GT:DS:GL:BD 0.32509157 0
1 2897968 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.956;LDAF=0.1187;AVGPOST=0.9809;RSQ=0.9361;ERATE=0.0005;THETA=0.0141;AC=256;AN=2184 GT:DS:GL:BD 0.11721612 0
1 2898000 . G GC 25383 PASS INDEL;BAVGPOST=0.949;BRSQ=0.886;LDAF=0.7876;AVGPOST=0.9497;RSQ=0.9002;ERATE=0.0006;THETA=0.0014;AC=1727;AN=2184 GT:DS:GL:BD 0.79075092 1
1 2898004 rs57379840 C CT 73339 PASS INDEL;BAVGPOST=0.949;BRSQ=0.885;LDAF=0.7885;AVGPOST=0.9488;RSQ=0.8997;ERATE=0.0005;THETA=0.0098;AC=1728;AN=2184 GT:DS:GL:BD 0.79120880 1
1 2898049 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7355;ERATE=0.0004;THETA=0.0159;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2898180 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.835;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.7770;ERATE=0.0004;THETA=0.0106;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2898199 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.948;LDAF=0.0234;AVGPOST=0.9965;RSQ=0.9401;ERATE=0.0005;THETA=0.0121;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 2898223 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0055;AVGPOST=0.9984;RSQ=0.8740;ERATE=0.0004;THETA=0.0057;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2898447 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7479;ERATE=0.0004;THETA=0.0169;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2898487 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.946;LDAF=0.0193;AVGPOST=0.9979;RSQ=0.9598;ERATE=0.0004;THETA=0.0030;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 2898488 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0038;AVGPOST=0.9979;RSQ=0.8138;ERATE=0.0004;THETA=0.0013;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2898494 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0354;AVGPOST=0.9982;RSQ=0.9806;ERATE=0.0004;THETA=0.0062;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 2898515 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0487;AVGPOST=0.9984;RSQ=0.9881;ERATE=0.0004;THETA=0.0051;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 2898556 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1880;AVGPOST=0.9945;RSQ=0.9865;ERATE=0.0004;THETA=0.0008;AC=413;AN=2184 GT:DS:GL:BD 0.18910256 0
1 2898559 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0082;AVGPOST=0.9985;RSQ=0.9271;ERATE=0.0004;THETA=0.0010;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2898663 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.738;LDAF=0.0025;AVGPOST=0.9962;RSQ=0.3886;ERATE=0.0005;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2898731 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0238;AVGPOST=0.9988;RSQ=0.9790;ERATE=0.0004;THETA=0.0015;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 2898815 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.785;LDAF=0.0038;AVGPOST=0.9960;RSQ=0.5612;ERATE=0.0015;THETA=0.0022;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2898818 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0041;AVGPOST=0.9989;RSQ=0.8983;ERATE=0.0003;THETA=0.0044;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2898839 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.678;LDAF=0.0038;AVGPOST=0.9976;RSQ=0.7391;ERATE=0.0008;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2898959 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0054;AVGPOST=0.9993;RSQ=0.9370;ERATE=0.0004;THETA=0.0012;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2898960 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2053;AVGPOST=0.9975;RSQ=0.9939;ERATE=0.0004;THETA=0.0008;AC=448;AN=2184 GT:DS:GL:BD 0.20512821 0
1 2899094 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.690;LDAF=0.0021;AVGPOST=0.9978;RSQ=0.5961;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2899133 . CA C 51 PASS INDEL;BAVGPOST=0.911;BRSQ=0.196;LDAF=0.2067;AVGPOST=0.7193;RSQ=0.3106;ERATE=0.0110;THETA=0.0025;AC=224;AN=2184 GT:DS:GL:BD 0.10256410 0
1 2899134 . AC A 1496 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0240;AVGPOST=0.9987;RSQ=0.9774;ERATE=0.0004;THETA=0.0005;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 2899174 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.743;LDAF=0.0058;AVGPOST=0.9955;RSQ=0.7226;ERATE=0.0007;THETA=0.0020;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2899337 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0242;AVGPOST=0.9988;RSQ=0.9794;ERATE=0.0005;THETA=0.0008;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 2899338 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0832;AVGPOST=0.9963;RSQ=0.9812;ERATE=0.0004;THETA=0.0025;AC=179;AN=2184 GT:DS:GL:BD 0.08195971 0
1 2899349 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2046;AVGPOST=0.9948;RSQ=0.9872;ERATE=0.0005;THETA=0.0009;AC=444;AN=2184 GT:DS:GL:BD 0.20329671 0
1 2899358 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.934;LDAF=0.0221;AVGPOST=0.9920;RSQ=0.8676;ERATE=0.0005;THETA=0.0009;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 2899380 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0046;AVGPOST=0.9955;RSQ=0.6372;ERATE=0.0010;THETA=0.0012;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2899433 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.8829;ERATE=0.0004;THETA=0.0015;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2899451 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0114;AVGPOST=0.9977;RSQ=0.9099;ERATE=0.0004;THETA=0.0024;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 2899477 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0027;AVGPOST=0.9973;RSQ=0.6072;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2899488 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.988;LDAF=0.2058;AVGPOST=0.9905;RSQ=0.9765;ERATE=0.0010;THETA=0.0007;AC=449;AN=2184 GT:DS:GL:BD 0.20558608 0
1 2899498 . GA G 177 PASS INDEL;BAVGPOST=1.000;BRSQ=0.670;LDAF=0.0016;AVGPOST=0.9976;RSQ=0.3924;ERATE=0.0006;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2899538 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.805;LDAF=0.0093;AVGPOST=0.9973;RSQ=0.8706;ERATE=0.0004;THETA=0.0012;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2899603 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.617;LDAF=0.0228;AVGPOST=0.9803;RSQ=0.6484;ERATE=0.0008;THETA=0.0008;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 2899615 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0053;AVGPOST=0.9980;RSQ=0.8436;ERATE=0.0006;THETA=0.0038;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2899635 . T TGCCAGG 4605 PASS INDEL;BAVGPOST=0.992;BRSQ=0.909;LDAF=0.0489;AVGPOST=0.9818;RSQ=0.8583;ERATE=0.0014;THETA=0.0021;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 2899648 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.938;LDAF=0.0492;AVGPOST=0.9887;RSQ=0.9188;ERATE=0.0014;THETA=0.0019;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 2899648 . G GCCAGGT 8706 PASS INDEL;BAVGPOST=0.981;BRSQ=0.855;LDAF=0.0526;AVGPOST=0.9776;RSQ=0.8349;ERATE=0.0025;THETA=0.0004;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 2899656 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7433;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2899697 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0232;AVGPOST=0.9988;RSQ=0.9805;ERATE=0.0004;THETA=0.0011;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 2899715 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0233;AVGPOST=0.9987;RSQ=0.9801;ERATE=0.0003;THETA=0.0029;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 2899728 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6567;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2899834 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4595;ERATE=0.0005;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2899850 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0087;AVGPOST=0.9982;RSQ=0.9155;ERATE=0.0004;THETA=0.0015;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2899887 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.735;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.5678;ERATE=0.0004;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2899893 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.809;LDAF=0.0029;AVGPOST=0.9983;RSQ=0.7549;ERATE=0.0006;THETA=0.0014;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2899962 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.810;LDAF=0.0103;AVGPOST=0.9970;RSQ=0.8771;ERATE=0.0005;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 2900074 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.766;LDAF=0.0027;AVGPOST=0.9970;RSQ=0.5227;ERATE=0.0009;THETA=0.0018;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2900123 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4793;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2900176 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0022;AVGPOST=0.9981;RSQ=0.7206;ERATE=0.0004;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2900266 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0239;AVGPOST=0.9997;RSQ=0.9943;ERATE=0.0004;THETA=0.0005;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 2900271 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9253;ERATE=0.0005;THETA=0.0019;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2900363 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.751;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6031;ERATE=0.0004;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2900372 rs35024254 T TC 6759 PASS INDEL;BAVGPOST=0.997;BRSQ=0.974;LDAF=0.0457;AVGPOST=0.9920;RSQ=0.9430;ERATE=0.0012;THETA=0.0006;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 2900400 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.719;LDAF=0.0031;AVGPOST=0.9971;RSQ=0.6456;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2900429 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.778;LDAF=0.0024;AVGPOST=0.9985;RSQ=0.7352;ERATE=0.0004;THETA=0.0029;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2900457 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8398;ERATE=0.0005;THETA=0.0014;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2900506 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0106;AVGPOST=0.9988;RSQ=0.9583;ERATE=0.0004;THETA=0.0008;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 2900512 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.544;LDAF=0.0017;AVGPOST=0.9979;RSQ=0.4862;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2900603 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7731;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2900611 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2900612 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2900616 . GA G 72 PASS INDEL;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4637;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2900747 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0023;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2900755 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.827;LDAF=0.0026;AVGPOST=0.9980;RSQ=0.6595;ERATE=0.0006;THETA=0.0027;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2900829 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.832;LDAF=0.0044;AVGPOST=0.9977;RSQ=0.7985;ERATE=0.0006;THETA=0.0012;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2900922 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0733;AVGPOST=0.9956;RSQ=0.9821;ERATE=0.0004;THETA=0.0026;AC=161;AN=2184 GT:DS:GL:BD 0.07371795 0
1 2900957 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0026;AVGPOST=0.9992;RSQ=0.8676;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2900961 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2900962 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7200;ERATE=0.0005;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2900988 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.892;LDAF=0.0155;AVGPOST=0.9952;RSQ=0.8734;ERATE=0.0005;THETA=0.0009;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 2901044 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0018;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2901049 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.887;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2901064 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.780;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6917;ERATE=0.0005;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2901112 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0040;AVGPOST=0.9992;RSQ=0.9133;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2901118 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0145;AVGPOST=0.9988;RSQ=0.9685;ERATE=0.0003;THETA=0.0014;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 2901145 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6373;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2901158 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0065;AVGPOST=0.9974;RSQ=0.8398;ERATE=0.0007;THETA=0.0014;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2901194 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0026;AVGPOST=0.9972;RSQ=0.5097;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2901274 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6351;ERATE=0.0004;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2901292 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0023;AVGPOST=0.9978;RSQ=0.6066;ERATE=0.0006;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2901296 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7809;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2901350 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2901358 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.824;LDAF=0.0035;AVGPOST=0.9973;RSQ=0.6787;ERATE=0.0007;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2901452 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7156;ERATE=0.0004;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2901473 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0245;AVGPOST=0.9964;RSQ=0.9529;ERATE=0.0005;THETA=0.0007;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 2901520 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.898;LDAF=0.0034;AVGPOST=0.9983;RSQ=0.8436;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2901542 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0085;AVGPOST=0.9986;RSQ=0.9374;ERATE=0.0004;THETA=0.0012;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2901584 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.644;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4978;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2901667 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0642;AVGPOST=0.9984;RSQ=0.9914;ERATE=0.0004;THETA=0.0033;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 2901736 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.933;LDAF=0.0225;AVGPOST=0.9910;RSQ=0.8425;ERATE=0.0004;THETA=0.0017;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 2901760 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0055;AVGPOST=0.9990;RSQ=0.9296;ERATE=0.0004;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2901871 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0103;AVGPOST=0.9994;RSQ=0.9724;ERATE=0.0004;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 2901881 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.8994;ERATE=0.0003;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2901882 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.726;LDAF=0.0017;AVGPOST=0.9981;RSQ=0.5851;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2901901 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0077;AVGPOST=0.9980;RSQ=0.8968;ERATE=0.0004;THETA=0.0018;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2901951 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0241;AVGPOST=0.9993;RSQ=0.9872;ERATE=0.0004;THETA=0.0009;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 2901984 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0031;AVGPOST=0.9988;RSQ=0.8300;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2902090 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0018;AVGPOST=0.9986;RSQ=0.6813;ERATE=0.0005;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2902128 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.970;LDAF=0.8630;AVGPOST=0.9820;RSQ=0.9416;ERATE=0.0004;THETA=0.0018;AC=1890;AN=2184 GT:DS:GL:BD 0.86538464 1
1 2902185 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0040;AVGPOST=0.9985;RSQ=0.8570;ERATE=0.0003;THETA=0.0011;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2902195 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2902227 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0627;AVGPOST=0.9988;RSQ=0.9944;ERATE=0.0005;THETA=0.0012;AC=138;AN=2184 GT:DS:GL:BD 0.06318682 0
1 2902243 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5914;ERATE=0.0003;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2902248 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6488;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2902271 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0009;AVGPOST=0.9987;RSQ=0.3903;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2902298 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9420;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2902320 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0132;AVGPOST=0.9999;RSQ=0.9949;ERATE=0.0003;THETA=0.0007;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2902359 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0151;AVGPOST=0.9991;RSQ=0.9776;ERATE=0.0004;THETA=0.0005;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 2902398 . A AT 276 PASS INDEL;BAVGPOST=0.999;BRSQ=0.717;LDAF=0.0032;AVGPOST=0.9973;RSQ=0.6916;ERATE=0.0010;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2902803 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5703;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2902817 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9531;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2902982 . T TTTCC 102 PASS INDEL;BAVGPOST=0.999;BRSQ=0.746;LDAF=0.0021;AVGPOST=0.9977;RSQ=0.4974;ERATE=0.0008;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2903143 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0004;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2903159 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1298;AVGPOST=0.9974;RSQ=0.9905;ERATE=0.0004;THETA=0.0011;AC=283;AN=2184 GT:DS:GL:BD 0.12957875 0
1 2903274 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0049;AVGPOST=0.9992;RSQ=0.9275;ERATE=0.0004;THETA=0.0012;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2903285 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.780;LDAF=0.0057;AVGPOST=0.9956;RSQ=0.6773;ERATE=0.0007;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2903291 . AC A 62 PASS INDEL;BAVGPOST=0.999;BRSQ=0.778;LDAF=0.0035;AVGPOST=0.9958;RSQ=0.5643;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2903380 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0509;AVGPOST=0.9984;RSQ=0.9878;ERATE=0.0004;THETA=0.0005;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 2903521 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0050;AVGPOST=0.9984;RSQ=0.8666;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2903573 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.786;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.7464;ERATE=0.0005;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2903577 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2297;AVGPOST=0.9981;RSQ=0.9957;ERATE=0.0003;THETA=0.0010;AC=502;AN=2184 GT:DS:GL:BD 0.22985348 0
1 2903628 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0657;AVGPOST=0.9971;RSQ=0.9861;ERATE=0.0004;THETA=0.0006;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 2903707 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.784;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.5986;ERATE=0.0009;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2903725 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.879;LDAF=0.0213;AVGPOST=0.9953;RSQ=0.9114;ERATE=0.0006;THETA=0.0016;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 2903771 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.832;LDAF=0.0029;AVGPOST=0.9986;RSQ=0.7739;ERATE=0.0010;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2903861 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.581;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6201;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2903883 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0027;AVGPOST=0.9980;RSQ=0.6722;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2903922 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0654;AVGPOST=0.9994;RSQ=0.9962;ERATE=0.0004;THETA=0.0013;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 2903992 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.804;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9197;ERATE=0.0003;THETA=0.0016;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2904014 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.771;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8319;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2904055 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0343;AVGPOST=0.9997;RSQ=0.9967;ERATE=0.0003;THETA=0.0007;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 2904056 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.988;LDAF=0.5217;AVGPOST=0.9778;RSQ=0.9728;ERATE=0.0007;THETA=0.0007;AC=1135;AN=2184 GT:DS:GL:BD 0.51968867 1
1 2904097 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0061;AVGPOST=0.9985;RSQ=0.9051;ERATE=0.0004;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2904145 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0503;AVGPOST=0.9988;RSQ=0.9921;ERATE=0.0004;THETA=0.0007;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 2904176 . A ATG 26 PASS INDEL;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4714;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2904226 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0038;AVGPOST=0.9987;RSQ=0.8689;ERATE=0.0003;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2904263 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0006;AVGPOST=0.9992;RSQ=0.4974;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2904264 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0060;AVGPOST=0.9985;RSQ=0.9022;ERATE=0.0004;THETA=0.0009;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2904533 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.6124;ERATE=0.0005;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2904612 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.8989;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2904617 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0035;AVGPOST=0.9989;RSQ=0.8649;ERATE=0.0003;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2904634 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.757;LDAF=0.0086;AVGPOST=0.9969;RSQ=0.8670;ERATE=0.0004;THETA=0.0008;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 2904635 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0184;AVGPOST=0.9992;RSQ=0.9837;ERATE=0.0003;THETA=0.0006;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 2904703 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.896;LDAF=0.0105;AVGPOST=0.9970;RSQ=0.8744;ERATE=0.0008;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2904867 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8097;ERATE=0.0004;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2904886 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.792;LDAF=0.0068;AVGPOST=0.9973;RSQ=0.8246;ERATE=0.0010;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2904988 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.889;LDAF=0.0075;AVGPOST=0.9977;RSQ=0.8648;ERATE=0.0007;THETA=0.0008;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 2905086 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0346;AVGPOST=0.9991;RSQ=0.9892;ERATE=0.0004;THETA=0.0012;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 2905103 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.752;LDAF=0.0029;AVGPOST=0.9966;RSQ=0.4896;ERATE=0.0010;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2905177 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0240;AVGPOST=0.9996;RSQ=0.9929;ERATE=0.0003;THETA=0.0009;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 2905214 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0057;AVGPOST=0.9995;RSQ=0.9595;ERATE=0.0004;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2905249 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0033;AVGPOST=0.9995;RSQ=0.9314;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2905255 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6745;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2905330 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7910;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2905369 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0088;AVGPOST=0.9977;RSQ=0.9104;ERATE=0.0004;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2905449 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0240;AVGPOST=0.9995;RSQ=0.9897;ERATE=0.0004;THETA=0.0006;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 2905504 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2905594 . G GA 224 PASS INDEL;BAVGPOST=0.998;BRSQ=0.699;LDAF=0.0046;AVGPOST=0.9939;RSQ=0.4880;ERATE=0.0010;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2905605 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2387;AVGPOST=0.9977;RSQ=0.9948;ERATE=0.0005;THETA=0.0006;AC=521;AN=2184 GT:DS:GL:BD 0.23855311 0
1 2905618 rs60158887 C CT 6655 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0239;AVGPOST=0.9994;RSQ=0.9876;ERATE=0.0004;THETA=0.0006;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 2905668 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2905677 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0039;AVGPOST=0.9996;RSQ=0.9532;ERATE=0.0003;THETA=0.0011;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2905752 . CA C 69 PASS INDEL;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2905781 . TCCATCCATCCAC T 2708 PASS INDEL;BAVGPOST=0.998;BRSQ=0.898;LDAF=0.0085;AVGPOST=0.9979;RSQ=0.9142;ERATE=0.0004;THETA=0.0018;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2905827 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.941;LDAF=0.0135;AVGPOST=0.9973;RSQ=0.9201;ERATE=0.0004;THETA=0.0006;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 2905952 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0055;AVGPOST=0.9999;RSQ=0.9921;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2905993 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6900;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2906042 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0054;AVGPOST=0.9995;RSQ=0.9571;ERATE=0.0003;THETA=0.0010;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2906175 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2906219 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7945;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2906289 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0027;AVGPOST=0.9983;RSQ=0.7270;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2906360 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0627;AVGPOST=0.9989;RSQ=0.9946;ERATE=0.0004;THETA=0.0007;AC=138;AN=2184 GT:DS:GL:BD 0.06318682 0
1 2906493 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0071;AVGPOST=0.9990;RSQ=0.9476;ERATE=0.0004;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 2906571 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0110;AVGPOST=0.9989;RSQ=0.9525;ERATE=0.0004;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 2906593 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.523;LDAF=0.0126;AVGPOST=0.9838;RSQ=0.4834;ERATE=0.0039;THETA=0.0011;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2906603 . AG A 37 PASS INDEL;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0015;AVGPOST=0.9977;RSQ=0.2994;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2906638 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.693;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.6853;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2906676 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.678;LDAF=0.0058;AVGPOST=0.9973;RSQ=0.8160;ERATE=0.0004;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2906694 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0134;AVGPOST=0.9987;RSQ=0.9637;ERATE=0.0004;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2906737 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2906782 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.914;LDAF=0.0077;AVGPOST=0.9970;RSQ=0.8400;ERATE=0.0004;THETA=0.0014;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2906924 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5650;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2906970 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6637;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2906992 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0499;AVGPOST=0.9984;RSQ=0.9882;ERATE=0.0003;THETA=0.0008;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 2907081 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0111;AVGPOST=0.9988;RSQ=0.9503;ERATE=0.0004;THETA=0.0024;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 2907190 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0243;AVGPOST=0.9987;RSQ=0.9794;ERATE=0.0004;THETA=0.0009;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 2907197 . TG T 37 PASS INDEL;BAVGPOST=1.000;BRSQ=0.675;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4019;ERATE=0.0006;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2907401 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0021;AVGPOST=0.9983;RSQ=0.6625;ERATE=0.0006;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2907416 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7063;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2907435 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2569;AVGPOST=0.9968;RSQ=0.9938;ERATE=0.0006;THETA=0.0006;AC=562;AN=2184 GT:DS:GL:BD 0.25732601 0
1 2907457 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0016;AVGPOST=0.9981;RSQ=0.5884;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2907483 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0152;AVGPOST=0.9998;RSQ=0.9926;ERATE=0.0003;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 2907505 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9484;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2907540 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.899;LDAF=0.0043;AVGPOST=0.9987;RSQ=0.8638;ERATE=0.0004;THETA=0.0011;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2907644 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.746;LDAF=0.0035;AVGPOST=0.9967;RSQ=0.6607;ERATE=0.0009;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2907667 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1303;AVGPOST=0.9991;RSQ=0.9966;ERATE=0.0004;THETA=0.0009;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 2907751 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.936;LDAF=0.0128;AVGPOST=0.9981;RSQ=0.9368;ERATE=0.0004;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 2907766 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0004;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2907833 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.863;LDAF=0.0037;AVGPOST=0.9984;RSQ=0.8228;ERATE=0.0003;THETA=0.0014;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2907919 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0034;AVGPOST=0.9988;RSQ=0.8578;ERATE=0.0004;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2907980 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1306;AVGPOST=0.9990;RSQ=0.9963;ERATE=0.0004;THETA=0.0004;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 2908068 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0096;AVGPOST=0.9992;RSQ=0.9723;ERATE=0.0004;THETA=0.0011;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 2908070 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.2380;AVGPOST=0.9981;RSQ=0.9958;ERATE=0.0005;THETA=0.0007;AC=520;AN=2184 GT:DS:GL:BD 0.23809524 0
1 2908104 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2908198 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.4807;ERATE=0.0004;THETA=0.0034;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2908203 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0030;AVGPOST=0.9992;RSQ=0.8862;ERATE=0.0004;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2908243 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5492;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2908252 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.637;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2908301 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.7871;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2908353 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2908388 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2287;AVGPOST=0.9968;RSQ=0.9931;ERATE=0.0005;THETA=0.0007;AC=498;AN=2184 GT:DS:GL:BD 0.22802198 0
1 2908504 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0013;AVGPOST=0.9981;RSQ=0.3898;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2908570 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6361;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2908589 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0040;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2908603 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6072;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2908746 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0245;AVGPOST=0.9992;RSQ=0.9863;ERATE=0.0003;THETA=0.0008;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 2908806 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1297;AVGPOST=0.9984;RSQ=0.9941;ERATE=0.0004;THETA=0.0008;AC=282;AN=2184 GT:DS:GL:BD 0.12912089 0
1 2908818 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0241;AVGPOST=0.9993;RSQ=0.9884;ERATE=0.0004;THETA=0.0010;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 2908846 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7604;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2908848 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0478;AVGPOST=0.9994;RSQ=0.9943;ERATE=0.0004;THETA=0.0010;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 2908912 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.737;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6173;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2908926 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0038;AVGPOST=0.9976;RSQ=0.7700;ERATE=0.0007;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2908999 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0762;AVGPOST=0.9989;RSQ=0.9958;ERATE=0.0004;THETA=0.0042;AC=167;AN=2184 GT:DS:GL:BD 0.07646520 0
1 2909014 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7492;ERATE=0.0003;THETA=0.0028;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2909041 . A AC 20 PASS INDEL;BAVGPOST=0.999;BRSQ=0.647;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6160;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2909138 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0715;AVGPOST=0.9980;RSQ=0.9886;ERATE=0.0003;THETA=0.0006;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 2909139 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0023;AVGPOST=0.9974;RSQ=0.6122;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2909150 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0710;AVGPOST=0.9991;RSQ=0.9946;ERATE=0.0003;THETA=0.0014;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 2909154 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5931;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2909170 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0256;AVGPOST=0.9979;RSQ=0.9732;ERATE=0.0003;THETA=0.0011;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 2909215 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0701;AVGPOST=0.9990;RSQ=0.9940;ERATE=0.0003;THETA=0.0010;AC=153;AN=2184 GT:DS:GL:BD 0.07005495 0
1 2909250 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1290;AVGPOST=0.9990;RSQ=0.9962;ERATE=0.0004;THETA=0.0007;AC=281;AN=2184 GT:DS:GL:BD 0.12866300 0
1 2909287 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0758;AVGPOST=0.9989;RSQ=0.9950;ERATE=0.0005;THETA=0.0007;AC=165;AN=2184 GT:DS:GL:BD 0.07554945 0
1 2909306 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.917;LDAF=0.0112;AVGPOST=0.9973;RSQ=0.8992;ERATE=0.0004;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 2909371 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0478;AVGPOST=0.9991;RSQ=0.9919;ERATE=0.0004;THETA=0.0010;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 2909377 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2909381 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2909492 . CT C 4517 PASS INDEL;BAVGPOST=0.995;BRSQ=0.917;LDAF=0.0301;AVGPOST=0.9893;RSQ=0.8681;ERATE=0.0005;THETA=0.0011;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 2909501 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9063;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2909564 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0240;AVGPOST=0.9995;RSQ=0.9932;ERATE=0.0003;THETA=0.0005;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 2909582 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0179;AVGPOST=0.9989;RSQ=0.9794;ERATE=0.0003;THETA=0.0034;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 2909587 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0152;AVGPOST=0.9997;RSQ=0.9913;ERATE=0.0004;THETA=0.0008;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 2909660 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8366;ERATE=0.0004;THETA=0.0046;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2909688 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6141;ERATE=0.0005;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2909716 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.955;LDAF=0.3201;AVGPOST=0.9722;RSQ=0.9586;ERATE=0.0048;THETA=0.0018;AC=712;AN=2184 GT:DS:GL:BD 0.32600734 0
1 2909719 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0026;AVGPOST=0.9970;RSQ=0.5039;ERATE=0.0008;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2909732 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7739;ERATE=0.0004;THETA=0.0031;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2909737 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.955;LDAF=0.1273;AVGPOST=0.9964;RSQ=0.9868;ERATE=0.0004;THETA=0.0012;AC=280;AN=2184 GT:DS:GL:BD 0.12820514 0
1 2909829 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2909838 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1300;AVGPOST=0.9980;RSQ=0.9929;ERATE=0.0004;THETA=0.0008;AC=282;AN=2184 GT:DS:GL:BD 0.12912089 0
1 2910018 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6995;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2910033 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1260;AVGPOST=0.9973;RSQ=0.9890;ERATE=0.0007;THETA=0.0013;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 2910066 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.959;LDAF=0.0253;AVGPOST=0.9986;RSQ=0.9777;ERATE=0.0004;THETA=0.0007;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 2910068 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9545;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2910125 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6637;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2910149 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6088;ERATE=0.0005;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2910325 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.2672;AVGPOST=0.9988;RSQ=0.9977;ERATE=0.0003;THETA=0.0004;AC=584;AN=2184 GT:DS:GL:BD 0.26739928 0
1 2910339 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6318;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2910340 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8618;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2910344 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3085;AVGPOST=0.9988;RSQ=0.9978;ERATE=0.0005;THETA=0.0006;AC=674;AN=2184 GT:DS:GL:BD 0.30860806 0
1 2910359 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0152;AVGPOST=0.9997;RSQ=0.9912;ERATE=0.0003;THETA=0.0009;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 2910396 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1291;AVGPOST=0.9995;RSQ=0.9980;ERATE=0.0003;THETA=0.0063;AC=281;AN=2184 GT:DS:GL:BD 0.12866300 0
1 2910425 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0013;AVGPOST=0.9994;RSQ=0.8029;ERATE=0.0006;THETA=0.0025;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2910441 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0577;AVGPOST=0.9997;RSQ=0.9981;ERATE=0.0003;THETA=0.0004;AC=126;AN=2184 GT:DS:GL:BD 0.05769231 0
1 2910614 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7452;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2910628 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9154;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2910660 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2910741 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0237;AVGPOST=0.9993;RSQ=0.9876;ERATE=0.0004;THETA=0.0011;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 2910801 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0027;AVGPOST=0.9995;RSQ=0.9244;ERATE=0.0009;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2910812 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2910816 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8637;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2911030 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.3794;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2911038 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7627;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2911193 . TA T 80 PASS INDEL;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.5986;ERATE=0.0006;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2911241 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7366;ERATE=0.0005;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2911287 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2911312 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6963;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2911342 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9019;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2911357 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3094;AVGPOST=0.9976;RSQ=0.9961;ERATE=0.0005;THETA=0.0005;AC=677;AN=2184 GT:DS:GL:BD 0.30998167 0
1 2911366 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.0259;AVGPOST=0.9993;RSQ=0.9891;ERATE=0.0003;THETA=0.0006;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 2911459 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1221;AVGPOST=0.9993;RSQ=0.9972;ERATE=0.0004;THETA=0.0004;AC=267;AN=2184 GT:DS:GL:BD 0.12225275 0
1 2911558 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.400;LDAF=0.0165;AVGPOST=0.9761;RSQ=0.4478;ERATE=0.0010;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 2911559 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.613;LDAF=0.0109;AVGPOST=0.9812;RSQ=0.2695;ERATE=0.0015;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2911568 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.372;LDAF=0.0120;AVGPOST=0.9876;RSQ=0.5406;ERATE=0.0013;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2911596 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.426;LDAF=0.0054;AVGPOST=0.9934;RSQ=0.4830;ERATE=0.0010;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2911697 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.429;LDAF=0.0080;AVGPOST=0.9880;RSQ=0.3631;ERATE=0.0016;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2911783 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.963;BRSQ=0.564;LDAF=0.0378;AVGPOST=0.9771;RSQ=0.7769;ERATE=0.0017;THETA=0.0005;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 2911879 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.4361;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2911895 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0349;AVGPOST=0.9997;RSQ=0.9967;ERATE=0.0003;THETA=0.0005;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 2911942 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.793;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.7594;ERATE=0.0005;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2911974 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5018;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2912155 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.881;LDAF=0.0108;AVGPOST=0.9961;RSQ=0.8658;ERATE=0.0004;THETA=0.0011;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 2912156 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0245;AVGPOST=0.9981;RSQ=0.9680;ERATE=0.0006;THETA=0.0012;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 2912200 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1434;AVGPOST=0.9977;RSQ=0.9922;ERATE=0.0004;THETA=0.0034;AC=311;AN=2184 GT:DS:GL:BD 0.14239927 0
1 2912227 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3085;AVGPOST=0.9981;RSQ=0.9966;ERATE=0.0004;THETA=0.0011;AC=674;AN=2184 GT:DS:GL:BD 0.30860806 0
1 2912281 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0567;AVGPOST=0.9998;RSQ=0.9983;ERATE=0.0003;THETA=0.0004;AC=124;AN=2184 GT:DS:GL:BD 0.05677656 0
1 2912332 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0029;AVGPOST=0.9981;RSQ=0.7383;ERATE=0.0005;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2912359 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0153;AVGPOST=0.9995;RSQ=0.9860;ERATE=0.0004;THETA=0.0008;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 2912360 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0243;AVGPOST=0.9989;RSQ=0.9814;ERATE=0.0004;THETA=0.0005;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 2912362 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2912403 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0572;AVGPOST=0.9988;RSQ=0.9901;ERATE=0.0005;THETA=0.0006;AC=124;AN=2184 GT:DS:GL:BD 0.05677656 0
1 2912456 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2912513 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.5384;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2912519 . TAG T 771 PASS INDEL;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0053;AVGPOST=0.9985;RSQ=0.8716;ERATE=0.0004;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2912579 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.7141;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2912581 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1231;AVGPOST=0.9996;RSQ=0.9983;ERATE=0.0004;THETA=0.0007;AC=269;AN=2184 GT:DS:GL:BD 0.12316850 0
1 2912594 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.5642;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2912717 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.1233;AVGPOST=0.9990;RSQ=0.9964;ERATE=0.0004;THETA=0.0006;AC=269;AN=2184 GT:DS:GL:BD 0.12316850 0
1 2912750 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4883;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2912847 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3071;AVGPOST=0.9963;RSQ=0.9945;ERATE=0.0004;THETA=0.0004;AC=670;AN=2184 GT:DS:GL:BD 0.30677655 0
1 2912883 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.664;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2912978 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.687;LDAF=0.0026;AVGPOST=0.9974;RSQ=0.6245;ERATE=0.0006;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2913002 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2519;AVGPOST=0.9985;RSQ=0.9966;ERATE=0.0007;THETA=0.0011;AC=550;AN=2184 GT:DS:GL:BD 0.25183150 0
1 2913160 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.822;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8264;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2913204 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2913234 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8608;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2913235 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1290;AVGPOST=0.9995;RSQ=0.9983;ERATE=0.0003;THETA=0.0010;AC=281;AN=2184 GT:DS:GL:BD 0.12866300 0
1 2913261 rs61586184 AG A 6028 PASS INDEL;BAVGPOST=0.994;BRSQ=0.965;LDAF=0.0784;AVGPOST=0.9994;RSQ=0.9964;ERATE=0.0003;THETA=0.0005;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 2913299 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3092;AVGPOST=0.9978;RSQ=0.9966;ERATE=0.0006;THETA=0.0005;AC=674;AN=2184 GT:DS:GL:BD 0.30860806 0
1 2913395 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4953;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2913422 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5467;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2913480 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0152;AVGPOST=0.9999;RSQ=0.9956;ERATE=0.0003;THETA=0.0008;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 2913508 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0787;AVGPOST=0.9988;RSQ=0.9924;ERATE=0.0005;THETA=0.0010;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 2913559 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.761;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4366;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2913566 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7829;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2913582 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.7553;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2913583 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7641;ERATE=0.0003;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2913588 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0765;AVGPOST=0.9985;RSQ=0.9910;ERATE=0.0005;THETA=0.0006;AC=167;AN=2184 GT:DS:GL:BD 0.07646520 0
1 2913776 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0254;AVGPOST=0.9984;RSQ=0.9757;ERATE=0.0004;THETA=0.0005;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 2913896 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.951;LDAF=0.1279;AVGPOST=0.9963;RSQ=0.9877;ERATE=0.0004;THETA=0.0005;AC=280;AN=2184 GT:DS:GL:BD 0.12820514 0
1 2913897 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.950;LDAF=0.1281;AVGPOST=0.9957;RSQ=0.9852;ERATE=0.0004;THETA=0.0004;AC=280;AN=2184 GT:DS:GL:BD 0.12820514 0
1 2913925 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3096;AVGPOST=0.9975;RSQ=0.9965;ERATE=0.0004;THETA=0.0007;AC=677;AN=2184 GT:DS:GL:BD 0.30998167 0
1 2913979 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0782;AVGPOST=0.9995;RSQ=0.9971;ERATE=0.0004;THETA=0.0005;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 2914008 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0046;AVGPOST=0.9980;RSQ=0.8205;ERATE=0.0004;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2914022 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6606;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2914288 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.963;LDAF=0.2196;AVGPOST=0.9630;RSQ=0.9231;ERATE=0.0090;THETA=0.0006;AC=479;AN=2184 GT:DS:GL:BD 0.21932234 0
1 2914299 . T TA 134 PASS INDEL;BAVGPOST=0.997;BRSQ=0.680;LDAF=0.0063;AVGPOST=0.9952;RSQ=0.6951;ERATE=0.0008;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2914314 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.922;LDAF=0.0640;AVGPOST=0.9768;RSQ=0.8527;ERATE=0.0054;THETA=0.0005;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 2914326 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.726;LDAF=0.0062;AVGPOST=0.9931;RSQ=0.5462;ERATE=0.0012;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2914352 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.815;LDAF=0.0843;AVGPOST=0.9465;RSQ=0.7561;ERATE=0.0184;THETA=0.0008;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 2914618 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3160;AVGPOST=0.9981;RSQ=0.9973;ERATE=0.0004;THETA=0.0010;AC=690;AN=2184 GT:DS:GL:BD 0.31593406 0
1 2914625 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2914721 . CAG C 1096 PASS INDEL;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0099;AVGPOST=0.9985;RSQ=0.9443;ERATE=0.0004;THETA=0.0007;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2914784 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2914878 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6947;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2915041 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0782;AVGPOST=0.9995;RSQ=0.9970;ERATE=0.0004;THETA=0.0008;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 2915062 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3085;AVGPOST=0.9991;RSQ=0.9983;ERATE=0.0004;THETA=0.0009;AC=674;AN=2184 GT:DS:GL:BD 0.30860806 0
1 2915098 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5324;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2915128 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3081;AVGPOST=0.9982;RSQ=0.9969;ERATE=0.0005;THETA=0.0005;AC=674;AN=2184 GT:DS:GL:BD 0.30860806 0
1 2915152 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.7861;ERATE=0.0005;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2915233 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0058;AVGPOST=0.9994;RSQ=0.9510;ERATE=0.0004;THETA=0.0011;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2915263 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1290;AVGPOST=0.9995;RSQ=0.9980;ERATE=0.0004;THETA=0.0005;AC=281;AN=2184 GT:DS:GL:BD 0.12866300 0
1 2915273 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3104;AVGPOST=0.9979;RSQ=0.9962;ERATE=0.0008;THETA=0.0010;AC=677;AN=2184 GT:DS:GL:BD 0.30998167 0
1 2915278 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0229;AVGPOST=0.9999;RSQ=0.9983;ERATE=0.0003;THETA=0.0005;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 2915334 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1302;AVGPOST=0.9987;RSQ=0.9955;ERATE=0.0004;THETA=0.0007;AC=283;AN=2184 GT:DS:GL:BD 0.12957875 0
1 2915460 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0097;AVGPOST=0.9986;RSQ=0.9497;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2915521 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.8926;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2915554 . AT A 7464 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0782;AVGPOST=0.9986;RSQ=0.9910;ERATE=0.0004;THETA=0.0004;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 2915562 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2512;AVGPOST=0.9989;RSQ=0.9980;ERATE=0.0003;THETA=0.0006;AC=548;AN=2184 GT:DS:GL:BD 0.25091577 0
1 2915613 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8366;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2915676 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2915876 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2915884 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1296;AVGPOST=0.9984;RSQ=0.9936;ERATE=0.0007;THETA=0.0005;AC=282;AN=2184 GT:DS:GL:BD 0.12912089 0
1 2915923 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2915959 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0036;AVGPOST=0.9991;RSQ=0.8929;ERATE=0.0003;THETA=0.0021;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2916049 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0162;AVGPOST=0.9997;RSQ=0.9907;ERATE=0.0003;THETA=0.0005;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 2916130 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0782;AVGPOST=0.9996;RSQ=0.9973;ERATE=0.0003;THETA=0.0007;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 2916137 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2517;AVGPOST=0.9978;RSQ=0.9955;ERATE=0.0005;THETA=0.0011;AC=550;AN=2184 GT:DS:GL:BD 0.25183150 0
1 2916160 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3000;AVGPOST=0.9984;RSQ=0.9970;ERATE=0.0004;THETA=0.0006;AC=655;AN=2184 GT:DS:GL:BD 0.29990843 0
1 2916166 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0036;AVGPOST=0.9991;RSQ=0.8967;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2916183 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1240;AVGPOST=0.9985;RSQ=0.9949;ERATE=0.0004;THETA=0.0016;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 2916252 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0232;AVGPOST=0.9992;RSQ=0.9859;ERATE=0.0004;THETA=0.0007;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 2916345 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2998;AVGPOST=0.9986;RSQ=0.9975;ERATE=0.0005;THETA=0.0003;AC=655;AN=2184 GT:DS:GL:BD 0.29990843 0
1 2916356 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2995;AVGPOST=0.9984;RSQ=0.9969;ERATE=0.0007;THETA=0.0011;AC=655;AN=2184 GT:DS:GL:BD 0.29990843 0
1 2916371 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6252;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2916388 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.824;LDAF=0.0056;AVGPOST=0.9981;RSQ=0.8620;ERATE=0.0004;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2916458 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3011;AVGPOST=0.9985;RSQ=0.9974;ERATE=0.0004;THETA=0.0005;AC=658;AN=2184 GT:DS:GL:BD 0.30128205 0
1 2916471 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3014;AVGPOST=0.9981;RSQ=0.9967;ERATE=0.0004;THETA=0.0008;AC=658;AN=2184 GT:DS:GL:BD 0.30128205 0
1 2916478 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6272;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2916521 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0076;AVGPOST=0.9995;RSQ=0.9673;ERATE=0.0003;THETA=0.0020;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2916644 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0784;AVGPOST=0.9990;RSQ=0.9945;ERATE=0.0003;THETA=0.0010;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 2916670 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2974;AVGPOST=0.9947;RSQ=0.9909;ERATE=0.0009;THETA=0.0009;AC=651;AN=2184 GT:DS:GL:BD 0.29807693 0
1 2916681 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2986;AVGPOST=0.9971;RSQ=0.9953;ERATE=0.0004;THETA=0.0033;AC=654;AN=2184 GT:DS:GL:BD 0.29945055 0
1 2916700 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.969;LDAF=0.0229;AVGPOST=0.9993;RSQ=0.9876;ERATE=0.0004;THETA=0.0004;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 2916711 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2916811 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0505;AVGPOST=0.9975;RSQ=0.9840;ERATE=0.0004;THETA=0.0013;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 2916950 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7560;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2917057 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5516;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2917074 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6094;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2917086 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0486;AVGPOST=0.9994;RSQ=0.9947;ERATE=0.0004;THETA=0.0006;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 2917136 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2990;AVGPOST=0.9984;RSQ=0.9968;ERATE=0.0004;THETA=0.0014;AC=654;AN=2184 GT:DS:GL:BD 0.29945055 0
1 2917182 . A AC 22 PASS INDEL;BAVGPOST=0.999;BRSQ=0.611;LDAF=0.0019;AVGPOST=0.9971;RSQ=0.3899;ERATE=0.0005;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2917228 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.598;LDAF=0.0019;AVGPOST=0.9973;RSQ=0.4222;ERATE=0.0005;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2917290 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.684;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8446;ERATE=0.0004;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2917334 rs35693840 A AG 16044 PASS INDEL;BAVGPOST=0.978;BRSQ=0.945;LDAF=0.2309;AVGPOST=0.9834;RSQ=0.9673;ERATE=0.0005;THETA=0.0004;AC=505;AN=2184 GT:DS:GL:BD 0.23122710 0
1 2917335 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0094;AVGPOST=0.9986;RSQ=0.9443;ERATE=0.0004;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 2917337 . G GC 1936 PASS INDEL;BAVGPOST=0.960;BRSQ=0.887;LDAF=0.2097;AVGPOST=0.9645;RSQ=0.9243;ERATE=0.0010;THETA=0.0006;AC=462;AN=2184 GT:DS:GL:BD 0.21153846 0
1 2917339 . G GC 2311 PASS INDEL;BAVGPOST=0.963;BRSQ=0.898;LDAF=0.2151;AVGPOST=0.9712;RSQ=0.9399;ERATE=0.0005;THETA=0.0006;AC=478;AN=2184 GT:DS:GL:BD 0.21886447 0
1 2917356 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0081;AVGPOST=0.9990;RSQ=0.9437;ERATE=0.0004;THETA=0.0021;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2917360 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0234;AVGPOST=0.9996;RSQ=0.9929;ERATE=0.0003;THETA=0.0004;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 2917367 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0221;AVGPOST=0.9994;RSQ=0.9874;ERATE=0.0004;THETA=0.0009;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 2917373 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0484;AVGPOST=0.9998;RSQ=0.9980;ERATE=0.0003;THETA=0.0009;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 2917377 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.2751;AVGPOST=0.9963;RSQ=0.9928;ERATE=0.0005;THETA=0.0007;AC=602;AN=2184 GT:DS:GL:BD 0.27564102 0
1 2917460 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.982;LDAF=0.2929;AVGPOST=0.9908;RSQ=0.9850;ERATE=0.0007;THETA=0.0010;AC=645;AN=2184 GT:DS:GL:BD 0.29532966 0
1 2917463 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.982;LDAF=0.2941;AVGPOST=0.9925;RSQ=0.9877;ERATE=0.0006;THETA=0.0027;AC=646;AN=2184 GT:DS:GL:BD 0.29578754 0
1 2917472 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.981;LDAF=0.2706;AVGPOST=0.9917;RSQ=0.9855;ERATE=0.0005;THETA=0.0005;AC=594;AN=2184 GT:DS:GL:BD 0.27197802 0
1 2917522 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0155;AVGPOST=0.9986;RSQ=0.9649;ERATE=0.0003;THETA=0.0058;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 2917565 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0473;AVGPOST=0.9973;RSQ=0.9773;ERATE=0.0007;THETA=0.0006;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 2917566 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0021;AVGPOST=0.9987;RSQ=0.7358;ERATE=0.0004;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2917622 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.816;LDAF=0.0047;AVGPOST=0.9973;RSQ=0.7584;ERATE=0.0009;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2917698 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1296;AVGPOST=0.9983;RSQ=0.9934;ERATE=0.0005;THETA=0.0012;AC=282;AN=2184 GT:DS:GL:BD 0.12912089 0
1 2917760 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0479;AVGPOST=0.9986;RSQ=0.9897;ERATE=0.0004;THETA=0.0005;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 2917832 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.705;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6674;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2917854 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7890;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2917934 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.5741;ERATE=0.0007;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2917975 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.923;LDAF=0.0146;AVGPOST=0.9946;RSQ=0.8551;ERATE=0.0003;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2918021 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3001;AVGPOST=0.9981;RSQ=0.9965;ERATE=0.0004;THETA=0.0005;AC=655;AN=2184 GT:DS:GL:BD 0.29990843 0
1 2918041 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0170;AVGPOST=0.9986;RSQ=0.9600;ERATE=0.0004;THETA=0.0009;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 2918099 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.932;LDAF=0.0643;AVGPOST=0.9990;RSQ=0.9933;ERATE=0.0004;THETA=0.0004;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 2918185 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.987;LDAF=0.3009;AVGPOST=0.9924;RSQ=0.9867;ERATE=0.0010;THETA=0.0006;AC=655;AN=2184 GT:DS:GL:BD 0.29990843 0
1 2918195 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.2995;AVGPOST=0.9964;RSQ=0.9933;ERATE=0.0008;THETA=0.0005;AC=653;AN=2184 GT:DS:GL:BD 0.29899266 0
1 2918212 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0068;AVGPOST=0.9978;RSQ=0.8644;ERATE=0.0006;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2918225 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.688;LDAF=0.0076;AVGPOST=0.9947;RSQ=0.7201;ERATE=0.0006;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2918229 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1293;AVGPOST=0.9980;RSQ=0.9926;ERATE=0.0005;THETA=0.0008;AC=281;AN=2184 GT:DS:GL:BD 0.12866300 0
1 2918318 . C CA 140 PASS INDEL;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0030;AVGPOST=0.9967;RSQ=0.5889;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2918338 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7266;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2918374 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0790;AVGPOST=0.9992;RSQ=0.9953;ERATE=0.0004;THETA=0.0007;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 2918437 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.571;LDAF=0.0021;AVGPOST=0.9968;RSQ=0.3696;ERATE=0.0006;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2918511 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2222;AVGPOST=0.9975;RSQ=0.9940;ERATE=0.0006;THETA=0.0010;AC=484;AN=2184 GT:DS:GL:BD 0.22161172 0
1 2918521 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.871;LDAF=0.0042;AVGPOST=0.9983;RSQ=0.8813;ERATE=0.0004;THETA=0.0020;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2918543 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.976;LDAF=0.0261;AVGPOST=0.9981;RSQ=0.9682;ERATE=0.0006;THETA=0.0010;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 2918572 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.986;LDAF=0.2960;AVGPOST=0.9718;RSQ=0.9493;ERATE=0.0057;THETA=0.0003;AC=641;AN=2184 GT:DS:GL:BD 0.29349816 0
1 2918595 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.955;BRSQ=0.647;LDAF=0.0821;AVGPOST=0.9207;RSQ=0.5962;ERATE=0.0125;THETA=0.0011;AC=136;AN=2184 GT:DS:GL:BD 0.06227106 0
1 2918611 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.927;BRSQ=0.465;LDAF=0.0885;AVGPOST=0.9113;RSQ=0.5843;ERATE=0.0061;THETA=0.0006;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 2918629 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.859;BRSQ=0.679;LDAF=0.2373;AVGPOST=0.8582;RSQ=0.7302;ERATE=0.0120;THETA=0.0009;AC=489;AN=2184 GT:DS:GL:BD 0.22390109 0
1 2918642 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.948;BRSQ=0.707;LDAF=0.1006;AVGPOST=0.9565;RSQ=0.8313;ERATE=0.0016;THETA=0.0012;AC=223;AN=2184 GT:DS:GL:BD 0.10210623 0
1 2918643 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.948;BRSQ=0.707;LDAF=0.1058;AVGPOST=0.9473;RSQ=0.8071;ERATE=0.0014;THETA=0.0017;AC=230;AN=2184 GT:DS:GL:BD 0.10531136 0
1 2918672 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.935;BRSQ=0.853;LDAF=0.2521;AVGPOST=0.9633;RSQ=0.9330;ERATE=0.0016;THETA=0.0019;AC=542;AN=2184 GT:DS:GL:BD 0.24816850 0
1 2918673 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.944;BRSQ=0.865;LDAF=0.2265;AVGPOST=0.9754;RSQ=0.9496;ERATE=0.0009;THETA=0.0007;AC=491;AN=2184 GT:DS:GL:BD 0.22481684 0
1 2918690 MERGED_DEL_2_833 G <DEL> . . SV;BAVGPOST=0.986;BRSQ=0.154;LDAF=0.0069;AVGPOST=0.9901;RSQ=0.4420;ERATE=0.0009;THETA=0.0008;CIEND=-17,33;CIPOS=-18,19;END=2919922;SOURCE=GenomeStrip_2918690_2919922;SVTYPE=DEL;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2918691 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.362;LDAF=0.0572;AVGPOST=0.9220;RSQ=0.4088;ERATE=0.0099;THETA=0.0041;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 2918716 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.649;LDAF=0.0143;AVGPOST=0.9873;RSQ=0.6588;ERATE=0.0015;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 2918725 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0105;AVGPOST=0.9991;RSQ=0.9619;ERATE=0.0005;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 2918753 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0254;AVGPOST=0.9994;RSQ=0.9890;ERATE=0.0004;THETA=0.0006;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 2918784 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.2991;AVGPOST=0.9979;RSQ=0.9960;ERATE=0.0004;THETA=0.0007;AC=655;AN=2184 GT:DS:GL:BD 0.29990843 0
1 2918790 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.2991;AVGPOST=0.9963;RSQ=0.9937;ERATE=0.0004;THETA=0.0011;AC=655;AN=2184 GT:DS:GL:BD 0.29990843 0
1 2918808 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0252;AVGPOST=0.9990;RSQ=0.9820;ERATE=0.0004;THETA=0.0012;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 2918811 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2993;AVGPOST=0.9978;RSQ=0.9959;ERATE=0.0004;THETA=0.0014;AC=655;AN=2184 GT:DS:GL:BD 0.29990843 0
1 2918831 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2997;AVGPOST=0.9974;RSQ=0.9954;ERATE=0.0005;THETA=0.0009;AC=656;AN=2184 GT:DS:GL:BD 0.30036631 0
1 2918907 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1287;AVGPOST=0.9981;RSQ=0.9927;ERATE=0.0004;THETA=0.0009;AC=281;AN=2184 GT:DS:GL:BD 0.12866300 0
1 2918908 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0039;AVGPOST=0.9968;RSQ=0.6818;ERATE=0.0004;THETA=0.0011;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2918938 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3007;AVGPOST=0.9963;RSQ=0.9938;ERATE=0.0006;THETA=0.0007;AC=658;AN=2184 GT:DS:GL:BD 0.30128205 0
1 2919009 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.652;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4511;ERATE=0.0005;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2919016 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0256;AVGPOST=0.9991;RSQ=0.9838;ERATE=0.0004;THETA=0.0008;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 2919031 MERGED_DEL_2_834 CGGGCCCCTGTCCTCTCCAGCGTGGAGTGGTTCTTTGTAACCGGCTTGCCACCAAAGGGCTGGTTGGTGTCTTTGAGGGACGATGTCAGGACTTGAGCTGCGGTCAGTTTCTGATACAGCGGTGACAGTGATCACAATAGCCTCGATGAGAAGCCTGTGCCATTGAGAGGACACATGGCTTCAGACCCTG C . . SV;BAVGPOST=0.922;BRSQ=0.762;LDAF=0.2072;AVGPOST=0.8898;RSQ=0.7266;ERATE=0.0243;THETA=0.0013;CIEND=-13,51;CIPOS=-25,27;END=2919366;HOMLEN=3;HOMSEQ=GGG;SOURCE=AssembledBreakpoints_2919031_291 GT:DS:GL:BD 0.17490843 0
1 2919032 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0017;AVGPOST=0.9974;RSQ=0.4032;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2919111 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.7903;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2919123 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.977;LDAF=0.1819;AVGPOST=0.9915;RSQ=0.9850;ERATE=0.0004;THETA=0.0006;AC=393;AN=2184 GT:DS:GL:BD 0.17994505 0
1 2919133 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4441;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2919150 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.977;LDAF=0.1819;AVGPOST=0.9899;RSQ=0.9816;ERATE=0.0008;THETA=0.0007;AC=393;AN=2184 GT:DS:GL:BD 0.17994505 0
1 2919151 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5273;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2919175 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.918;LDAF=0.0208;AVGPOST=0.9965;RSQ=0.9219;ERATE=0.0010;THETA=0.0011;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 2919222 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.972;LDAF=0.1575;AVGPOST=0.9911;RSQ=0.9806;ERATE=0.0004;THETA=0.0005;AC=341;AN=2184 GT:DS:GL:BD 0.15613553 0
1 2919247 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.954;LDAF=0.0894;AVGPOST=0.9913;RSQ=0.9666;ERATE=0.0004;THETA=0.0004;AC=193;AN=2184 GT:DS:GL:BD 0.08836997 0
1 2919468 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0254;AVGPOST=0.9986;RSQ=0.9774;ERATE=0.0004;THETA=0.0007;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 2919469 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3159;AVGPOST=0.9983;RSQ=0.9969;ERATE=0.0004;THETA=0.0013;AC=690;AN=2184 GT:DS:GL:BD 0.31593406 0
1 2919488 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0162;AVGPOST=0.9965;RSQ=0.9109;ERATE=0.0004;THETA=0.0010;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 2919531 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4866;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2919549 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.806;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7658;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2919602 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0790;AVGPOST=0.9989;RSQ=0.9937;ERATE=0.0004;THETA=0.0016;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 2919630 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2747;AVGPOST=0.9990;RSQ=0.9979;ERATE=0.0004;THETA=0.0007;AC=600;AN=2184 GT:DS:GL:BD 0.27472529 0
1 2919693 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7531;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2919802 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6738;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2919837 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0060;AVGPOST=0.9995;RSQ=0.9647;ERATE=0.0003;THETA=0.0020;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2919845 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0460;AVGPOST=0.9979;RSQ=0.9826;ERATE=0.0006;THETA=0.0007;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 2919846 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0207;AVGPOST=0.9988;RSQ=0.9734;ERATE=0.0005;THETA=0.0010;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 2919860 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.845;LDAF=0.0042;AVGPOST=0.9984;RSQ=0.8499;ERATE=0.0004;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2919910 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2919936 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0121;AVGPOST=0.9994;RSQ=0.9791;ERATE=0.0003;THETA=0.0009;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 2919942 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1743;AVGPOST=0.9986;RSQ=0.9956;ERATE=0.0004;THETA=0.0007;AC=380;AN=2184 GT:DS:GL:BD 0.17399268 0
1 2919963 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1460;AVGPOST=0.9991;RSQ=0.9972;ERATE=0.0004;THETA=0.0005;AC=319;AN=2184 GT:DS:GL:BD 0.14606227 0
1 2920009 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.621;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6248;ERATE=0.0006;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2920019 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1629;AVGPOST=0.9964;RSQ=0.9880;ERATE=0.0010;THETA=0.0007;AC=354;AN=2184 GT:DS:GL:BD 0.16208792 0
1 2920037 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1660;AVGPOST=0.9983;RSQ=0.9957;ERATE=0.0006;THETA=0.0006;AC=363;AN=2184 GT:DS:GL:BD 0.16620879 0
1 2920042 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1545;AVGPOST=0.9963;RSQ=0.9880;ERATE=0.0005;THETA=0.0010;AC=334;AN=2184 GT:DS:GL:BD 0.15293041 0
1 2920125 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0020;AVGPOST=0.9976;RSQ=0.5197;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2920138 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0789;AVGPOST=0.9979;RSQ=0.9896;ERATE=0.0004;THETA=0.0003;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 2920144 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.603;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5994;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2920158 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.973;LDAF=0.1745;AVGPOST=0.9937;RSQ=0.9826;ERATE=0.0011;THETA=0.0005;AC=380;AN=2184 GT:DS:GL:BD 0.17399268 0
1 2920172 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0027;AVGPOST=0.9986;RSQ=0.7899;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2920232 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0548;AVGPOST=0.9944;RSQ=0.9665;ERATE=0.0004;THETA=0.0008;AC=114;AN=2184 GT:DS:GL:BD 0.05219780 0
1 2920241 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=0.9991;RSQ=0.9438;ERATE=0.0005;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2920351 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0461;AVGPOST=0.9995;RSQ=0.9952;ERATE=0.0003;THETA=0.0005;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 2920355 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.697;LDAF=0.0034;AVGPOST=0.9962;RSQ=0.5751;ERATE=0.0006;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2920371 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0111;AVGPOST=0.9978;RSQ=0.9182;ERATE=0.0004;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 2920375 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0891;AVGPOST=0.9964;RSQ=0.9817;ERATE=0.0004;THETA=0.0005;AC=194;AN=2184 GT:DS:GL:BD 0.08882784 0
1 2920380 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.870;LDAF=0.0192;AVGPOST=0.9956;RSQ=0.9115;ERATE=0.0005;THETA=0.0017;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 2920419 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.3982;ERATE=0.0007;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2920431 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.985;LDAF=0.3338;AVGPOST=0.9857;RSQ=0.9781;ERATE=0.0019;THETA=0.0116;AC=728;AN=2184 GT:DS:GL:BD 0.33333334 0
1 2920463 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0167;AVGPOST=0.9984;RSQ=0.9573;ERATE=0.0004;THETA=0.0047;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 2920468 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1342;AVGPOST=0.9954;RSQ=0.9857;ERATE=0.0006;THETA=0.0003;AC=291;AN=2184 GT:DS:GL:BD 0.13324176 0
1 2920475 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0394;AVGPOST=0.9979;RSQ=0.9809;ERATE=0.0005;THETA=0.0005;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 2920529 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6895;ERATE=0.0005;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2920604 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.7104;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2920666 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.978;LDAF=0.0460;AVGPOST=0.9972;RSQ=0.9803;ERATE=0.0003;THETA=0.0010;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 2920698 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0125;AVGPOST=0.9980;RSQ=0.9299;ERATE=0.0004;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 2920733 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.969;LDAF=0.0350;AVGPOST=0.9975;RSQ=0.9692;ERATE=0.0007;THETA=0.0004;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 2920736 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.715;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5565;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2920741 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7720;ERATE=0.0006;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2920803 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0033;AVGPOST=0.9979;RSQ=0.7409;ERATE=0.0010;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2920849 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7515;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2920871 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.3548;ERATE=0.0004;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2921044 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.736;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2921070 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.689;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0003;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2921082 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.941;LDAF=0.0222;AVGPOST=0.9950;RSQ=0.9082;ERATE=0.0004;THETA=0.0007;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 2921103 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0075;AVGPOST=0.9995;RSQ=0.9711;ERATE=0.0004;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2921113 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.850;LDAF=0.0069;AVGPOST=0.9972;RSQ=0.8264;ERATE=0.0005;THETA=0.0050;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2921202 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0004;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2921204 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0052;AVGPOST=0.9989;RSQ=0.9156;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2921282 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1267;AVGPOST=0.9982;RSQ=0.9931;ERATE=0.0004;THETA=0.0007;AC=276;AN=2184 GT:DS:GL:BD 0.12637363 0
1 2921316 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6204;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2921328 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.3712;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2921330 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5598;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2921334 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.824;LDAF=0.0081;AVGPOST=0.9966;RSQ=0.8241;ERATE=0.0006;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 2921417 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1263;AVGPOST=0.9987;RSQ=0.9946;ERATE=0.0005;THETA=0.0006;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 2921446 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0463;AVGPOST=0.9968;RSQ=0.9727;ERATE=0.0005;THETA=0.0006;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 2921571 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.957;LDAF=0.0244;AVGPOST=0.9927;RSQ=0.8784;ERATE=0.0007;THETA=0.0013;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 2921595 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0022;AVGPOST=0.9973;RSQ=0.4683;ERATE=0.0007;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2921601 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0018;AVGPOST=0.9981;RSQ=0.5497;ERATE=0.0006;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2921629 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.792;LDAF=0.0116;AVGPOST=0.9945;RSQ=0.8063;ERATE=0.0009;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 2921693 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0237;AVGPOST=0.9972;RSQ=0.9656;ERATE=0.0003;THETA=0.0003;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 2921749 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.626;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5332;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2921860 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1262;AVGPOST=0.9994;RSQ=0.9974;ERATE=0.0003;THETA=0.0005;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 2921861 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2921909 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0388;AVGPOST=1.0000;RSQ=0.9995;ERATE=0.0003;THETA=0.0007;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 2921920 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2921926 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2922020 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1454;AVGPOST=0.9993;RSQ=0.9977;ERATE=0.0004;THETA=0.0005;AC=318;AN=2184 GT:DS:GL:BD 0.14560440 0
1 2922026 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.783;LDAF=0.0025;AVGPOST=0.9979;RSQ=0.6446;ERATE=0.0010;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2922094 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0088;AVGPOST=0.9988;RSQ=0.9446;ERATE=0.0005;THETA=0.0012;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 2922327 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1481;AVGPOST=0.9995;RSQ=0.9980;ERATE=0.0003;THETA=0.0005;AC=323;AN=2184 GT:DS:GL:BD 0.14789377 0
1 2922382 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8385;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2922387 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7153;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2922470 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0105;AVGPOST=0.9990;RSQ=0.9623;ERATE=0.0003;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 2922570 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7360;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2922572 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6646;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2922596 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0074;AVGPOST=0.9999;RSQ=0.9910;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2922619 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7039;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2922620 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.928;LDAF=0.0070;AVGPOST=0.9986;RSQ=0.9248;ERATE=0.0004;THETA=0.0009;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 2922744 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1728;AVGPOST=0.9985;RSQ=0.9956;ERATE=0.0004;THETA=0.0004;AC=376;AN=2184 GT:DS:GL:BD 0.17216118 0
1 2922789 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7559;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2922888 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6330;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2922907 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.871;LDAF=0.0032;AVGPOST=0.9978;RSQ=0.7709;ERATE=0.0005;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2922965 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.812;LDAF=0.0031;AVGPOST=0.9990;RSQ=0.8571;ERATE=0.0005;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2922987 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5110;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2922998 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.890;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2923094 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.0846;AVGPOST=0.9991;RSQ=0.9955;ERATE=0.0004;THETA=0.0003;AC=185;AN=2184 GT:DS:GL:BD 0.08470696 0
1 2923106 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.4920;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2923112 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5550;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2923113 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0061;AVGPOST=0.9989;RSQ=0.9297;ERATE=0.0004;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2923125 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.7068;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2923199 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0018;AVGPOST=0.9988;RSQ=0.7097;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2923201 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.878;LDAF=0.0322;AVGPOST=0.9944;RSQ=0.9365;ERATE=0.0003;THETA=0.0008;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 2923213 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2923219 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0016;AVGPOST=0.9988;RSQ=0.6902;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2923226 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8670;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2923320 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2923384 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1926;AVGPOST=0.9983;RSQ=0.9954;ERATE=0.0004;THETA=0.0013;AC=420;AN=2184 GT:DS:GL:BD 0.19230770 0
1 2923400 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0373;AVGPOST=0.9995;RSQ=0.9948;ERATE=0.0003;THETA=0.0008;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 2923563 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0208;AVGPOST=0.9995;RSQ=0.9877;ERATE=0.0004;THETA=0.0006;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 2923619 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2923684 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8527;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2923779 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0371;AVGPOST=0.9998;RSQ=0.9980;ERATE=0.0003;THETA=0.0013;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 2923779 . CAG C 9326 PASS INDEL;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0868;AVGPOST=0.9989;RSQ=0.9935;ERATE=0.0004;THETA=0.0003;AC=190;AN=2184 GT:DS:GL:BD 0.08699634 0
1 2923801 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.562;LDAF=0.0034;AVGPOST=0.9985;RSQ=0.8154;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2923899 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6850;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2923927 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2923983 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7548;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2924195 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.851;LDAF=0.0054;AVGPOST=0.9977;RSQ=0.8335;ERATE=0.0004;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2924346 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.699;LDAF=0.0032;AVGPOST=0.9969;RSQ=0.6385;ERATE=0.0005;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2924382 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0021;AVGPOST=0.9976;RSQ=0.6027;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2924454 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5277;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2924520 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.4825;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2924570 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7871;ERATE=0.0004;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2924666 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0872;AVGPOST=0.9992;RSQ=0.9956;ERATE=0.0004;THETA=0.0006;AC=190;AN=2184 GT:DS:GL:BD 0.08699634 0
1 2924720 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7778;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2924726 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3474;AVGPOST=0.9984;RSQ=0.9974;ERATE=0.0004;THETA=0.0006;AC=759;AN=2184 GT:DS:GL:BD 0.34752747 0
1 2924969 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0063;AVGPOST=0.9987;RSQ=0.9185;ERATE=0.0003;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2925191 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2925323 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.6191;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2925364 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7503;ERATE=0.0010;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2925390 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0367;AVGPOST=0.9996;RSQ=0.9960;ERATE=0.0004;THETA=0.0005;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 2925422 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3471;AVGPOST=0.9977;RSQ=0.9966;ERATE=0.0004;THETA=0.0012;AC=760;AN=2184 GT:DS:GL:BD 0.34798536 0
1 2925497 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1289;AVGPOST=0.9936;RSQ=0.9825;ERATE=0.0004;THETA=0.0004;AC=277;AN=2184 GT:DS:GL:BD 0.12683150 0
1 2925522 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3139;AVGPOST=0.9971;RSQ=0.9955;ERATE=0.0004;THETA=0.0008;AC=685;AN=2184 GT:DS:GL:BD 0.31364468 0
1 2925539 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0850;AVGPOST=0.9985;RSQ=0.9920;ERATE=0.0003;THETA=0.0007;AC=185;AN=2184 GT:DS:GL:BD 0.08470696 0
1 2925662 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.944;LDAF=0.0226;AVGPOST=0.9943;RSQ=0.9127;ERATE=0.0005;THETA=0.0006;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 2925710 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2925733 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0204;AVGPOST=0.9990;RSQ=0.9794;ERATE=0.0003;THETA=0.0006;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 2925740 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.714;LDAF=0.0028;AVGPOST=0.9984;RSQ=0.7770;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2925814 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0060;AVGPOST=0.9990;RSQ=0.9410;ERATE=0.0003;THETA=0.0009;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2925834 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0077;AVGPOST=0.9993;RSQ=0.9627;ERATE=0.0004;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2925886 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.660;LDAF=0.0036;AVGPOST=0.9971;RSQ=0.6914;ERATE=0.0007;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2926087 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2926166 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9490;ERATE=0.0004;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2926167 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0422;AVGPOST=0.9975;RSQ=0.9798;ERATE=0.0003;THETA=0.0005;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 2926168 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0424;AVGPOST=0.9964;RSQ=0.9699;ERATE=0.0004;THETA=0.0005;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 2926299 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0078;AVGPOST=0.9990;RSQ=0.9489;ERATE=0.0005;THETA=0.0008;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2926379 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1263;AVGPOST=0.9994;RSQ=0.9976;ERATE=0.0004;THETA=0.0006;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 2926413 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.823;LDAF=0.0033;AVGPOST=0.9987;RSQ=0.8301;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2926535 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0073;AVGPOST=0.9996;RSQ=0.9747;ERATE=0.0003;THETA=0.0008;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2926537 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2148;AVGPOST=0.9994;RSQ=0.9984;ERATE=0.0004;THETA=0.0007;AC=469;AN=2184 GT:DS:GL:BD 0.21474358 0
1 2926546 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2926555 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1260;AVGPOST=0.9992;RSQ=0.9969;ERATE=0.0004;THETA=0.0005;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 2926643 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0224;AVGPOST=0.9998;RSQ=0.9951;ERATE=0.0004;THETA=0.0008;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 2926654 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0031;AVGPOST=0.9990;RSQ=0.8586;ERATE=0.0004;THETA=0.0012;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2926698 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0069;AVGPOST=0.9990;RSQ=0.9466;ERATE=0.0003;THETA=0.0022;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2926702 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5924;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2926712 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7003;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2926756 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.6137;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2926785 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.983;LDAF=0.1479;AVGPOST=0.9984;RSQ=0.9947;ERATE=0.0004;THETA=0.0008;AC=323;AN=2184 GT:DS:GL:BD 0.14789377 0
1 2926840 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.727;LDAF=0.0041;AVGPOST=0.9963;RSQ=0.6205;ERATE=0.0010;THETA=0.0020;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2926973 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.983;LDAF=0.2033;AVGPOST=0.9952;RSQ=0.9878;ERATE=0.0011;THETA=0.0005;AC=444;AN=2184 GT:DS:GL:BD 0.20329671 0
1 2927001 rs35278633 C CT 4416 PASS INDEL;BAVGPOST=0.943;BRSQ=0.763;LDAF=0.1058;AVGPOST=0.9176;RSQ=0.6801;ERATE=0.0010;THETA=0.0016;AC=183;AN=2184 GT:DS:GL:BD 0.08379121 0
1 2927011 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.879;LDAF=0.1231;AVGPOST=0.9876;RSQ=0.9544;ERATE=0.0009;THETA=0.0004;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 2927014 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.883;LDAF=0.1456;AVGPOST=0.9851;RSQ=0.9521;ERATE=0.0007;THETA=0.0006;AC=322;AN=2184 GT:DS:GL:BD 0.14743590 0
1 2927036 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.498;LDAF=0.0106;AVGPOST=0.9927;RSQ=0.7139;ERATE=0.0010;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2927060 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.615;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.3810;ERATE=0.0007;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2927175 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.985;LDAF=0.1922;AVGPOST=0.9951;RSQ=0.9875;ERATE=0.0005;THETA=0.0005;AC=420;AN=2184 GT:DS:GL:BD 0.19230770 0
1 2927194 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.984;LDAF=0.0868;AVGPOST=0.9931;RSQ=0.9663;ERATE=0.0010;THETA=0.0003;AC=188;AN=2184 GT:DS:GL:BD 0.08608059 0
1 2927254 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.977;LDAF=0.1912;AVGPOST=0.9971;RSQ=0.9927;ERATE=0.0005;THETA=0.0012;AC=420;AN=2184 GT:DS:GL:BD 0.19230770 0
1 2927471 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.984;LDAF=0.1890;AVGPOST=0.9917;RSQ=0.9788;ERATE=0.0007;THETA=0.0008;AC=412;AN=2184 GT:DS:GL:BD 0.18864469 0
1 2927597 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7393;ERATE=0.0003;THETA=0.0040;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2927624 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.901;LDAF=0.0239;AVGPOST=0.9946;RSQ=0.9167;ERATE=0.0005;THETA=0.0002;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 2927678 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1251;AVGPOST=0.9984;RSQ=0.9948;ERATE=0.0003;THETA=0.0004;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 2927680 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2927722 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.725;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5077;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2927749 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.682;LDAF=0.0070;AVGPOST=0.9913;RSQ=0.5131;ERATE=0.0035;THETA=0.0051;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2927954 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.701;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6536;ERATE=0.0003;THETA=0.0034;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2928028 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2928361 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.367;LDAF=0.0033;AVGPOST=0.9944;RSQ=0.2549;ERATE=0.0012;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2928362 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0008;AVGPOST=0.9989;RSQ=0.4247;ERATE=0.0006;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2928421 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.913;LDAF=0.1537;AVGPOST=0.9605;RSQ=0.8784;ERATE=0.0010;THETA=0.0010;AC=322;AN=2184 GT:DS:GL:BD 0.14743590 0
1 2928478 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.772;LDAF=0.0061;AVGPOST=0.9985;RSQ=0.8880;ERATE=0.0005;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2928519 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0156;AVGPOST=0.9975;RSQ=0.9336;ERATE=0.0004;THETA=0.0006;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 2928545 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0209;AVGPOST=0.9988;RSQ=0.9732;ERATE=0.0004;THETA=0.0030;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 2928579 . G GA 878 PASS INDEL;BAVGPOST=0.876;BRSQ=0.315;LDAF=0.0811;AVGPOST=0.9132;RSQ=0.5616;ERATE=0.0038;THETA=0.0008;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 2928582 . A AC 4485 PASS INDEL;BAVGPOST=0.995;BRSQ=0.928;LDAF=0.0404;AVGPOST=0.9877;RSQ=0.8906;ERATE=0.0010;THETA=0.0043;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 2928920 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.742;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.3622;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2928921 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1048;AVGPOST=0.9951;RSQ=0.9806;ERATE=0.0003;THETA=0.0008;AC=229;AN=2184 GT:DS:GL:BD 0.10485348 0
1 2928976 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.966;LDAF=0.2866;AVGPOST=0.9841;RSQ=0.9708;ERATE=0.0016;THETA=0.0010;AC=623;AN=2184 GT:DS:GL:BD 0.28525642 0
1 2929171 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.337;LDAF=0.0132;AVGPOST=0.9854;RSQ=0.5195;ERATE=0.0016;THETA=0.0015;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 2929318 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.603;LDAF=0.0078;AVGPOST=0.9941;RSQ=0.7112;ERATE=0.0005;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2929384 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.741;LDAF=0.0018;AVGPOST=0.9972;RSQ=0.4191;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2929442 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.924;LDAF=0.0105;AVGPOST=0.9988;RSQ=0.9534;ERATE=0.0003;THETA=0.0013;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 2929581 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.5113;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2929594 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.0032;AVGPOST=0.9988;RSQ=0.8419;ERATE=0.0004;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2929666 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.763;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2929791 . C CAG 12 PASS INDEL;BAVGPOST=0.999;BRSQ=0.596;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4407;ERATE=0.0005;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2929834 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0027;AVGPOST=0.9989;RSQ=0.8123;ERATE=0.0004;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2930162 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4203;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2930339 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0044;AVGPOST=0.9991;RSQ=0.9054;ERATE=0.0004;THETA=0.0022;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2930372 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.728;LDAF=0.0029;AVGPOST=0.9971;RSQ=0.5961;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2930579 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.917;LDAF=0.0198;AVGPOST=0.9994;RSQ=0.9863;ERATE=0.0004;THETA=0.0011;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 2930596 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0004;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2930683 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7211;ERATE=0.0007;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2930730 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0066;AVGPOST=0.9988;RSQ=0.9240;ERATE=0.0004;THETA=0.0030;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2930740 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.846;LDAF=0.0059;AVGPOST=0.9961;RSQ=0.7403;ERATE=0.0004;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2930779 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0057;AVGPOST=0.9958;RSQ=0.7650;ERATE=0.0006;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2930786 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.850;LDAF=0.0056;AVGPOST=0.9981;RSQ=0.8475;ERATE=0.0006;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2930918 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0033;AVGPOST=0.9987;RSQ=0.8309;ERATE=0.0005;THETA=0.0032;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2930943 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.599;LDAF=0.0022;AVGPOST=0.9978;RSQ=0.5677;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2931032 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0670;AVGPOST=0.9991;RSQ=0.9959;ERATE=0.0004;THETA=0.0003;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 2931191 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.981;LDAF=0.0665;AVGPOST=0.9981;RSQ=0.9904;ERATE=0.0004;THETA=0.0010;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 2931220 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0046;AVGPOST=0.9989;RSQ=0.8927;ERATE=0.0007;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2931239 . G GA 1463 PASS INDEL;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0133;AVGPOST=0.9974;RSQ=0.9341;ERATE=0.0004;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2931267 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.5506;ERATE=0.0006;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2931327 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3385;AVGPOST=0.9963;RSQ=0.9942;ERATE=0.0005;THETA=0.0007;AC=741;AN=2184 GT:DS:GL:BD 0.33928570 0
1 2931389 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.771;LDAF=0.0110;AVGPOST=0.9947;RSQ=0.8117;ERATE=0.0005;THETA=0.0008;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2931414 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1271;AVGPOST=0.9972;RSQ=0.9904;ERATE=0.0004;THETA=0.0004;AC=278;AN=2184 GT:DS:GL:BD 0.12728938 0
1 2931440 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.974;LDAF=0.1278;AVGPOST=0.9963;RSQ=0.9882;ERATE=0.0003;THETA=0.0007;AC=280;AN=2184 GT:DS:GL:BD 0.12820514 0
1 2931557 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.848;LDAF=0.0045;AVGPOST=0.9973;RSQ=0.7585;ERATE=0.0006;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2931649 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.988;LDAF=0.1002;AVGPOST=0.9963;RSQ=0.9848;ERATE=0.0006;THETA=0.0006;AC=219;AN=2184 GT:DS:GL:BD 0.10027473 0
1 2931697 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7847;ERATE=0.0005;THETA=0.0031;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2931808 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.670;LDAF=0.0038;AVGPOST=0.9965;RSQ=0.6237;ERATE=0.0007;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2931815 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.767;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.5933;ERATE=0.0011;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2931847 . GTCC G 141 PASS INDEL;BAVGPOST=0.999;BRSQ=0.648;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.7661;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2931899 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.835;LDAF=0.0087;AVGPOST=0.9947;RSQ=0.7859;ERATE=0.0004;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 2931922 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0087;AVGPOST=0.9989;RSQ=0.9427;ERATE=0.0004;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2932028 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2932075 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.672;LDAF=0.0045;AVGPOST=0.9956;RSQ=0.5854;ERATE=0.0017;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2932116 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.923;LDAF=0.0205;AVGPOST=0.9942;RSQ=0.8807;ERATE=0.0004;THETA=0.0007;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 2932147 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3124;AVGPOST=0.9976;RSQ=0.9959;ERATE=0.0005;THETA=0.0005;AC=684;AN=2184 GT:DS:GL:BD 0.31318682 0
1 2932195 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0057;AVGPOST=0.9986;RSQ=0.9090;ERATE=0.0004;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2932200 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.734;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.5106;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2932216 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2959;AVGPOST=0.9971;RSQ=0.9953;ERATE=0.0004;THETA=0.0007;AC=647;AN=2184 GT:DS:GL:BD 0.29624543 0
1 2932252 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.785;LDAF=0.0039;AVGPOST=0.9970;RSQ=0.6832;ERATE=0.0009;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2932422 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0478;AVGPOST=0.9975;RSQ=0.9797;ERATE=0.0007;THETA=0.0006;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 2932429 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0385;AVGPOST=0.9982;RSQ=0.9820;ERATE=0.0004;THETA=0.0005;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 2932446 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.902;LDAF=0.0683;AVGPOST=0.9883;RSQ=0.9407;ERATE=0.0004;THETA=0.0007;AC=148;AN=2184 GT:DS:GL:BD 0.06776557 0
1 2932499 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2116;AVGPOST=0.9984;RSQ=0.9972;ERATE=0.0003;THETA=0.0035;AC=463;AN=2184 GT:DS:GL:BD 0.21199633 0
1 2932533 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2111;AVGPOST=0.9989;RSQ=0.9981;ERATE=0.0004;THETA=0.0010;AC=462;AN=2184 GT:DS:GL:BD 0.21153846 0
1 2932560 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1278;AVGPOST=0.9978;RSQ=0.9918;ERATE=0.0006;THETA=0.0004;AC=279;AN=2184 GT:DS:GL:BD 0.12774725 0
1 2932619 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2108;AVGPOST=0.9981;RSQ=0.9965;ERATE=0.0005;THETA=0.0009;AC=462;AN=2184 GT:DS:GL:BD 0.21153846 0
1 2932641 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0325;AVGPOST=0.9989;RSQ=0.9876;ERATE=0.0003;THETA=0.0004;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 2932657 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.6442;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2932678 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0070;AVGPOST=0.9967;RSQ=0.8071;ERATE=0.0005;THETA=0.0012;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2932840 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0207;AVGPOST=0.9969;RSQ=0.9463;ERATE=0.0004;THETA=0.0018;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 2932845 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.933;LDAF=0.0520;AVGPOST=0.9949;RSQ=0.9666;ERATE=0.0006;THETA=0.0008;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 2932898 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0065;AVGPOST=0.9987;RSQ=0.9186;ERATE=0.0003;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2932983 . GGA G 808 PASS INDEL;BAVGPOST=0.986;BRSQ=0.828;LDAF=0.0439;AVGPOST=0.9837;RSQ=0.8661;ERATE=0.0017;THETA=0.0006;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 2933044 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.916;BRSQ=0.323;LDAF=0.1167;AVGPOST=0.8524;RSQ=0.4200;ERATE=0.0283;THETA=0.0006;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 2933086 . GGA G 386 PASS INDEL;BAVGPOST=0.973;BRSQ=0.628;LDAF=0.0444;AVGPOST=0.9775;RSQ=0.8103;ERATE=0.0013;THETA=0.0007;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 2933157 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.879;LDAF=0.1286;AVGPOST=0.9833;RSQ=0.9454;ERATE=0.0022;THETA=0.0004;AC=277;AN=2184 GT:DS:GL:BD 0.12683150 0
1 2933347 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.848;LDAF=0.0029;AVGPOST=0.9970;RSQ=0.6330;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2933350 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6541;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2933363 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0378;AVGPOST=0.9992;RSQ=0.9898;ERATE=0.0004;THETA=0.0016;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 2933375 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2106;AVGPOST=0.9952;RSQ=0.9910;ERATE=0.0007;THETA=0.0008;AC=461;AN=2184 GT:DS:GL:BD 0.21108058 0
1 2933390 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.960;LDAF=0.0982;AVGPOST=0.9951;RSQ=0.9793;ERATE=0.0005;THETA=0.0029;AC=215;AN=2184 GT:DS:GL:BD 0.09844323 0
1 2933427 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.559;LDAF=0.0043;AVGPOST=0.9950;RSQ=0.5323;ERATE=0.0007;THETA=0.0030;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2933437 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0191;AVGPOST=0.9973;RSQ=0.9423;ERATE=0.0005;THETA=0.0006;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 2933519 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.651;LDAF=0.0021;AVGPOST=0.9987;RSQ=0.7147;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2933564 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0260;AVGPOST=0.9991;RSQ=0.9841;ERATE=0.0004;THETA=0.0041;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 2933575 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0266;AVGPOST=0.9979;RSQ=0.9688;ERATE=0.0004;THETA=0.0011;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 2933613 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.675;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6329;ERATE=0.0007;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2933714 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.675;LDAF=0.0020;AVGPOST=0.9984;RSQ=0.6324;ERATE=0.0005;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2933733 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.979;LDAF=0.1749;AVGPOST=0.9942;RSQ=0.9874;ERATE=0.0005;THETA=0.0043;AC=382;AN=2184 GT:DS:GL:BD 0.17490843 0
1 2933745 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.886;LDAF=0.0223;AVGPOST=0.9904;RSQ=0.8306;ERATE=0.0007;THETA=0.0005;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 2933753 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.977;LDAF=0.1763;AVGPOST=0.9899;RSQ=0.9778;ERATE=0.0014;THETA=0.0012;AC=385;AN=2184 GT:DS:GL:BD 0.17628205 0
1 2933813 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.980;LDAF=0.0356;AVGPOST=0.9979;RSQ=0.9763;ERATE=0.0005;THETA=0.0003;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 2933831 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.545;LDAF=0.0057;AVGPOST=0.9940;RSQ=0.5753;ERATE=0.0013;THETA=0.0030;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2933853 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.875;LDAF=0.0353;AVGPOST=0.9963;RSQ=0.9577;ERATE=0.0006;THETA=0.0007;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 2933902 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.967;LDAF=0.3331;AVGPOST=0.9628;RSQ=0.9435;ERATE=0.0046;THETA=0.0006;AC=728;AN=2184 GT:DS:GL:BD 0.33333334 0
1 2933928 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.970;LDAF=0.0383;AVGPOST=0.9963;RSQ=0.9664;ERATE=0.0005;THETA=0.0006;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 2933992 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0077;AVGPOST=0.9990;RSQ=0.9413;ERATE=0.0004;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2934083 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.733;LDAF=0.0025;AVGPOST=0.9968;RSQ=0.5016;ERATE=0.0004;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2934134 rs112075092 AAGG A 12163 PASS INDEL;BAVGPOST=0.977;BRSQ=0.934;LDAF=0.1963;AVGPOST=0.9650;RSQ=0.9174;ERATE=0.0069;THETA=0.0008;AC=420;AN=2184 GT:DS:GL:BD 0.19230770 0
1 2934312 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.976;LDAF=0.1021;AVGPOST=0.9961;RSQ=0.9836;ERATE=0.0006;THETA=0.0009;AC=221;AN=2184 GT:DS:GL:BD 0.10119048 0
1 2934354 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5268;ERATE=0.0004;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2934396 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.451;LDAF=0.0092;AVGPOST=0.9871;RSQ=0.4772;ERATE=0.0036;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2934533 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.773;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7608;ERATE=0.0004;THETA=0.0043;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2934632 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5098;ERATE=0.0005;THETA=0.0069;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2934712 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5058;ERATE=0.0004;THETA=0.0036;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2934731 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0094;AVGPOST=0.9985;RSQ=0.9344;ERATE=0.0006;THETA=0.0015;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2934735 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.983;LDAF=0.0440;AVGPOST=0.9968;RSQ=0.9719;ERATE=0.0005;THETA=0.0007;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 2934736 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0093;AVGPOST=0.9987;RSQ=0.9332;ERATE=0.0005;THETA=0.0012;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 2934766 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5172;ERATE=0.0006;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2934846 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0436;AVGPOST=0.9976;RSQ=0.9790;ERATE=0.0003;THETA=0.0051;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 2934868 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0076;AVGPOST=0.9970;RSQ=0.8397;ERATE=0.0004;THETA=0.0029;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2935032 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.904;LDAF=0.0174;AVGPOST=0.9926;RSQ=0.8319;ERATE=0.0004;THETA=0.0068;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 2935084 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.755;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4644;ERATE=0.0004;THETA=0.0038;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2935149 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0064;AVGPOST=0.9969;RSQ=0.7912;ERATE=0.0006;THETA=0.0026;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2935228 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.983;LDAF=0.0829;AVGPOST=0.9935;RSQ=0.9701;ERATE=0.0006;THETA=0.0090;AC=179;AN=2184 GT:DS:GL:BD 0.08195971 0
1 2935274 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.947;LDAF=0.0082;AVGPOST=0.9986;RSQ=0.9313;ERATE=0.0005;THETA=0.0020;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2935287 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0125;AVGPOST=0.9972;RSQ=0.9083;ERATE=0.0004;THETA=0.0069;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 2935312 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.670;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4989;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2935337 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0201;AVGPOST=0.9986;RSQ=0.9713;ERATE=0.0003;THETA=0.0018;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 2935354 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0176;AVGPOST=0.9977;RSQ=0.9449;ERATE=0.0004;THETA=0.0007;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 2935362 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0032;AVGPOST=0.9992;RSQ=0.8797;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2935381 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0130;AVGPOST=0.9990;RSQ=0.9695;ERATE=0.0004;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 2935447 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.958;LDAF=0.0328;AVGPOST=0.9949;RSQ=0.9495;ERATE=0.0004;THETA=0.0007;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 2935504 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0019;AVGPOST=0.9986;RSQ=0.7538;ERATE=0.0003;THETA=0.0014;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2935510 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.5044;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2935607 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5628;ERATE=0.0004;THETA=0.0072;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2935685 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0008;AVGPOST=0.9989;RSQ=0.4112;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2935730 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.717;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6025;ERATE=0.0004;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2935751 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6589;ERATE=0.0004;THETA=0.0022;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2935754 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.980;LDAF=0.1499;AVGPOST=0.9887;RSQ=0.9711;ERATE=0.0011;THETA=0.0012;AC=326;AN=2184 GT:DS:GL:BD 0.14926741 0
1 2935779 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0120;AVGPOST=0.9978;RSQ=0.9372;ERATE=0.0004;THETA=0.0014;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 2935780 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.757;LDAF=0.0048;AVGPOST=0.9982;RSQ=0.8404;ERATE=0.0004;THETA=0.0015;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2935808 . CG C 996 PASS INDEL;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0221;AVGPOST=0.9971;RSQ=0.9401;ERATE=0.0006;THETA=0.0056;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 2935811 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.0135;AVGPOST=0.9993;RSQ=0.9760;ERATE=0.0003;THETA=0.0016;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2935963 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0044;AVGPOST=0.9990;RSQ=0.9015;ERATE=0.0004;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2936036 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.723;LDAF=0.0035;AVGPOST=0.9984;RSQ=0.8169;ERATE=0.0004;THETA=0.0052;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2936046 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8494;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2936112 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2936163 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0088;AVGPOST=0.9963;RSQ=0.8192;ERATE=0.0004;THETA=0.0043;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2936256 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.824;LDAF=0.0066;AVGPOST=0.9981;RSQ=0.8799;ERATE=0.0004;THETA=0.0043;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2936385 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0124;AVGPOST=0.9983;RSQ=0.9464;ERATE=0.0004;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 2936386 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.987;LDAF=0.2729;AVGPOST=0.9883;RSQ=0.9780;ERATE=0.0007;THETA=0.0003;AC=596;AN=2184 GT:DS:GL:BD 0.27289379 0
1 2936420 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.678;LDAF=0.0059;AVGPOST=0.9954;RSQ=0.6750;ERATE=0.0005;THETA=0.0013;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2936480 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.955;LDAF=0.9721;AVGPOST=0.9973;RSQ=0.9638;ERATE=0.0004;THETA=0.0011;AC=2122;AN=2184 GT:DS:GL:BD 0.97161174 1
1 2936544 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0034;AVGPOST=0.9988;RSQ=0.8428;ERATE=0.0005;THETA=0.0040;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2936678 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.824;LDAF=0.0052;AVGPOST=0.9973;RSQ=0.8041;ERATE=0.0011;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2936687 . G GT 441 PASS INDEL;BAVGPOST=0.949;BRSQ=0.731;LDAF=0.1013;AVGPOST=0.9430;RSQ=0.7845;ERATE=0.0008;THETA=0.0043;AC=216;AN=2184 GT:DS:GL:BD 0.09890110 0
1 2936689 . G GC 387 PASS INDEL;BAVGPOST=0.948;BRSQ=0.718;LDAF=0.1097;AVGPOST=0.9367;RSQ=0.7625;ERATE=0.0010;THETA=0.0005;AC=230;AN=2184 GT:DS:GL:BD 0.10531136 0
1 2936746 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.2648;AVGPOST=0.9942;RSQ=0.9893;ERATE=0.0006;THETA=0.0013;AC=577;AN=2184 GT:DS:GL:BD 0.26419413 0
1 2936754 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.2662;AVGPOST=0.9942;RSQ=0.9886;ERATE=0.0004;THETA=0.0007;AC=579;AN=2184 GT:DS:GL:BD 0.26510990 0
1 2936780 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0034;AVGPOST=0.9992;RSQ=0.8970;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2936789 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.898;LDAF=0.0165;AVGPOST=0.9944;RSQ=0.8598;ERATE=0.0004;THETA=0.0008;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 2936790 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0089;AVGPOST=0.9967;RSQ=0.8686;ERATE=0.0003;THETA=0.0031;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 2936803 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2609;AVGPOST=0.9965;RSQ=0.9935;ERATE=0.0003;THETA=0.0010;AC=569;AN=2184 GT:DS:GL:BD 0.26053113 0
1 2936815 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.991;LDAF=0.6326;AVGPOST=0.9920;RSQ=0.9888;ERATE=0.0005;THETA=0.0004;AC=1380;AN=2184 GT:DS:GL:BD 0.63186812 1
1 2936861 . TC T 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.659;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.4769;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2936870 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1024;AVGPOST=0.9984;RSQ=0.9936;ERATE=0.0008;THETA=0.0007;AC=224;AN=2184 GT:DS:GL:BD 0.10256410 0
1 2936874 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2936880 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0057;AVGPOST=0.9993;RSQ=0.9592;ERATE=0.0003;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2936906 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.845;LDAF=0.0023;AVGPOST=0.9995;RSQ=0.8976;ERATE=0.0005;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2937031 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.983;LDAF=0.2648;AVGPOST=0.9963;RSQ=0.9929;ERATE=0.0004;THETA=0.0006;AC=579;AN=2184 GT:DS:GL:BD 0.26510990 0
1 2937043 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.747;LDAF=0.0030;AVGPOST=0.9982;RSQ=0.7539;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2937050 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0040;AVGPOST=0.9984;RSQ=0.8362;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2937051 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.694;LDAF=0.0030;AVGPOST=0.9973;RSQ=0.6286;ERATE=0.0006;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2937113 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0018;AVGPOST=0.9994;RSQ=0.8768;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2937114 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0018;AVGPOST=0.9993;RSQ=0.8457;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2937139 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0993;AVGPOST=0.9987;RSQ=0.9947;ERATE=0.0003;THETA=0.0006;AC=216;AN=2184 GT:DS:GL:BD 0.09890110 0
1 2937216 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0019;AVGPOST=0.9982;RSQ=0.6546;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2937228 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0335;AVGPOST=0.9986;RSQ=0.9799;ERATE=0.0004;THETA=0.0007;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 2937247 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.712;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.4360;ERATE=0.0009;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2937279 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0064;AVGPOST=0.9993;RSQ=0.9494;ERATE=0.0003;THETA=0.0010;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2937299 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.696;LDAF=0.0043;AVGPOST=0.9980;RSQ=0.8137;ERATE=0.0004;THETA=0.0011;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2937312 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0998;AVGPOST=0.9980;RSQ=0.9913;ERATE=0.0006;THETA=0.0005;AC=218;AN=2184 GT:DS:GL:BD 0.09981685 0
1 2937380 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0065;AVGPOST=0.9989;RSQ=0.9331;ERATE=0.0005;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2937402 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.766;LDAF=0.0024;AVGPOST=0.9986;RSQ=0.7488;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2937418 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0037;AVGPOST=0.9988;RSQ=0.8526;ERATE=0.0004;THETA=0.0030;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2937431 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0071;AVGPOST=0.9982;RSQ=0.8984;ERATE=0.0004;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2937463 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0039;AVGPOST=0.9987;RSQ=0.8798;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2937550 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.976;LDAF=0.1503;AVGPOST=0.9936;RSQ=0.9812;ERATE=0.0006;THETA=0.0004;AC=332;AN=2184 GT:DS:GL:BD 0.15201466 0
1 2937551 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.983;LDAF=0.2572;AVGPOST=0.9939;RSQ=0.9879;ERATE=0.0005;THETA=0.0004;AC=567;AN=2184 GT:DS:GL:BD 0.25961539 0
1 2937684 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.851;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.8215;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2937750 . TC T 238 PASS INDEL;BAVGPOST=0.999;BRSQ=0.712;LDAF=0.0027;AVGPOST=0.9958;RSQ=0.4329;ERATE=0.0006;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2937774 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2937777 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7742;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2937847 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8302;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2937914 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0062;AVGPOST=0.9982;RSQ=0.8817;ERATE=0.0005;THETA=0.0045;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2938003 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6345;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2938261 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2938265 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2454;AVGPOST=0.9995;RSQ=0.9989;ERATE=0.0005;THETA=0.0003;AC=536;AN=2184 GT:DS:GL:BD 0.24542125 0
1 2938266 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2938276 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2938318 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9562;ERATE=0.0003;THETA=0.0041;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2938319 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0007;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 2938365 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2938395 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0037;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0012;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2938407 rs4013154 CAGA C 9515 PASS INDEL;BAVGPOST=0.991;BRSQ=0.968;LDAF=0.1516;AVGPOST=0.9969;RSQ=0.9901;ERATE=0.0007;THETA=0.0004;AC=331;AN=2184 GT:DS:GL:BD 0.15155677 0
1 2938424 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2938480 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2938505 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2938506 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2938569 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0361;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0008;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 2938580 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2938697 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.984;LDAF=0.2519;AVGPOST=0.9939;RSQ=0.9885;ERATE=0.0012;THETA=0.0005;AC=555;AN=2184 GT:DS:GL:BD 0.25412089 0
1 2938727 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2938736 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.8033;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2938772 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2938887 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0133;AVGPOST=0.9998;RSQ=0.9916;ERATE=0.0004;THETA=0.0007;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2938924 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0216;AVGPOST=0.9998;RSQ=0.9960;ERATE=0.0003;THETA=0.0005;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 2938931 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2938940 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7121;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2938989 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.1599;AVGPOST=0.9964;RSQ=0.9891;ERATE=0.0006;THETA=0.0006;AC=349;AN=2184 GT:DS:GL:BD 0.15979853 0
1 2939006 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2939081 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2939117 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0036;AVGPOST=0.9999;RSQ=0.9885;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2939118 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9499;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2939138 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0072;AVGPOST=0.9998;RSQ=0.9867;ERATE=0.0003;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 2939155 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2939331 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2939360 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2939390 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2939396 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2939398 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2939407 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2939409 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0778;AVGPOST=0.9998;RSQ=0.9989;ERATE=0.0003;THETA=0.0005;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 2939419 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9756;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2939464 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2939504 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2939522 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2939559 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2939560 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8296;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2939578 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0065;AVGPOST=0.9982;RSQ=0.8973;ERATE=0.0004;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2939740 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0037;AVGPOST=0.9992;RSQ=0.9053;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2939791 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.761;LDAF=0.0016;AVGPOST=0.9976;RSQ=0.4259;ERATE=0.0005;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2939804 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.876;LDAF=0.0071;AVGPOST=0.9940;RSQ=0.7016;ERATE=0.0006;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2939823 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4876;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2939828 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0043;AVGPOST=0.9981;RSQ=0.8288;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2939859 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0031;AVGPOST=0.9994;RSQ=0.9031;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2939869 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0038;AVGPOST=0.9998;RSQ=0.9710;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2939963 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0040;AVGPOST=0.9988;RSQ=0.8874;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2940012 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2545;AVGPOST=0.9972;RSQ=0.9941;ERATE=0.0005;THETA=0.0004;AC=557;AN=2184 GT:DS:GL:BD 0.25503662 0
1 2940049 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0041;AVGPOST=0.9976;RSQ=0.7584;ERATE=0.0007;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2940239 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.960;LDAF=0.0225;AVGPOST=0.9957;RSQ=0.9260;ERATE=0.0004;THETA=0.0004;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 2940253 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9562;ERATE=0.0005;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2940337 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0263;AVGPOST=0.9995;RSQ=0.9917;ERATE=0.0003;THETA=0.0003;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 2940345 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8316;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2940360 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0091;AVGPOST=0.9982;RSQ=0.9249;ERATE=0.0004;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 2940416 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0461;AVGPOST=0.9994;RSQ=0.9946;ERATE=0.0003;THETA=0.0006;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 2940514 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9263;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2940583 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6493;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2940588 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0016;AVGPOST=0.9988;RSQ=0.7478;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2940608 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6040;ERATE=0.0004;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2940616 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0937;AVGPOST=0.9985;RSQ=0.9931;ERATE=0.0004;THETA=0.0006;AC=204;AN=2184 GT:DS:GL:BD 0.09340660 0
1 2940625 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9882;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2940691 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.614;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5874;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2940749 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9882;ERATE=0.0003;THETA=0.0035;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2940836 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6710;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2940884 . T TC 701 PASS INDEL;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0037;AVGPOST=0.9997;RSQ=0.9650;ERATE=0.0003;THETA=0.0036;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2940924 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9770;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2940929 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2940944 . A AG 106 PASS INDEL;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0038;AVGPOST=0.9982;RSQ=0.8328;ERATE=0.0004;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2940945 . G GA 872 PASS INDEL;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0045;AVGPOST=0.9991;RSQ=0.9193;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2940971 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0038;AVGPOST=0.9998;RSQ=0.9723;ERATE=0.0004;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2940998 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1514;AVGPOST=0.9987;RSQ=0.9958;ERATE=0.0003;THETA=0.0012;AC=330;AN=2184 GT:DS:GL:BD 0.15109891 0
1 2941030 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6964;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2941034 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5950;ERATE=0.0004;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2941072 . GC G 193 PASS INDEL;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0023;AVGPOST=0.9994;RSQ=0.8951;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2941111 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9824;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2941227 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0045;AVGPOST=0.9992;RSQ=0.9139;ERATE=0.0006;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2941335 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0067;AVGPOST=0.9988;RSQ=0.9182;ERATE=0.0003;THETA=0.0009;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2941382 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2941423 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.975;LDAF=0.0043;AVGPOST=0.9989;RSQ=0.9046;ERATE=0.0003;THETA=0.0016;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2941425 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0545;AVGPOST=0.9980;RSQ=0.9860;ERATE=0.0004;THETA=0.0010;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 2941724 . GTGGTGTTTTCAT G 10992 PASS INDEL;BAVGPOST=0.961;BRSQ=0.857;LDAF=0.1435;AVGPOST=0.9821;RSQ=0.9487;ERATE=0.0009;THETA=0.0006;AC=321;AN=2184 GT:DS:GL:BD 0.14697802 0
1 2941737 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1176;AVGPOST=0.9969;RSQ=0.9894;ERATE=0.0004;THETA=0.0006;AC=256;AN=2184 GT:DS:GL:BD 0.11721612 0
1 2941740 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.693;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4765;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2941918 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2941927 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.863;LDAF=0.0055;AVGPOST=0.9967;RSQ=0.8043;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2941938 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5429;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2941994 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2942056 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5569;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2942084 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0207;AVGPOST=0.9997;RSQ=0.9923;ERATE=0.0004;THETA=0.0007;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 2942286 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2943014 . ATG A 530 PASS INDEL;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9019;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2943026 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0643;AVGPOST=0.9993;RSQ=0.9957;ERATE=0.0003;THETA=0.0005;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 2943179 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2943183 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2674;AVGPOST=0.9996;RSQ=0.9991;ERATE=0.0004;THETA=0.0007;AC=584;AN=2184 GT:DS:GL:BD 0.26739928 0
1 2943306 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0198;AVGPOST=0.9996;RSQ=0.9910;ERATE=0.0003;THETA=0.0008;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 2943394 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0029;AVGPOST=0.9987;RSQ=0.8303;ERATE=0.0008;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2943398 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2673;AVGPOST=0.9987;RSQ=0.9971;ERATE=0.0005;THETA=0.0009;AC=584;AN=2184 GT:DS:GL:BD 0.26739928 0
1 2943537 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.915;LDAF=0.0244;AVGPOST=0.9965;RSQ=0.9398;ERATE=0.0010;THETA=0.0005;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 2943546 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0158;AVGPOST=0.9987;RSQ=0.9691;ERATE=0.0004;THETA=0.0008;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 2943594 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6530;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2943632 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0044;AVGPOST=0.9992;RSQ=0.9333;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2943636 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2943666 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6850;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2943668 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.2674;AVGPOST=0.9994;RSQ=0.9986;ERATE=0.0004;THETA=0.0006;AC=584;AN=2184 GT:DS:GL:BD 0.26739928 0
1 2943717 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2943722 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0067;AVGPOST=0.9989;RSQ=0.9266;ERATE=0.0004;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2943800 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.795;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6710;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2943908 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0759;AVGPOST=0.9986;RSQ=0.9919;ERATE=0.0004;THETA=0.0013;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 2944038 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2661;AVGPOST=0.9952;RSQ=0.9910;ERATE=0.0005;THETA=0.0008;AC=581;AN=2184 GT:DS:GL:BD 0.26602563 0
1 2944086 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1512;AVGPOST=0.9968;RSQ=0.9893;ERATE=0.0006;THETA=0.0004;AC=328;AN=2184 GT:DS:GL:BD 0.15018316 0
1 2944192 . G GGGC 722 PASS INDEL;BAVGPOST=0.938;BRSQ=0.604;LDAF=0.1376;AVGPOST=0.8693;RSQ=0.5815;ERATE=0.0133;THETA=0.0006;AC=214;AN=2184 GT:DS:GL:BD 0.09798535 0
1 2944193 . G GGC 618 PASS INDEL;BAVGPOST=0.956;BRSQ=0.683;LDAF=0.0869;AVGPOST=0.9631;RSQ=0.8280;ERATE=0.0027;THETA=0.0005;AC=182;AN=2184 GT:DS:GL:BD 0.08333334 0
1 2944194 . G GC 342 PASS INDEL;BAVGPOST=0.955;BRSQ=0.683;LDAF=0.0859;AVGPOST=0.9703;RSQ=0.8624;ERATE=0.0021;THETA=0.0006;AC=186;AN=2184 GT:DS:GL:BD 0.08516484 0
1 2944196 . G GC 172 PASS INDEL;BAVGPOST=0.994;BRSQ=0.620;LDAF=0.0144;AVGPOST=0.9831;RSQ=0.5935;ERATE=0.0010;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 2944347 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.774;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7556;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2944352 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2944478 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.737;LDAF=0.0030;AVGPOST=0.9990;RSQ=0.8445;ERATE=0.0004;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2944527 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.975;LDAF=0.2423;AVGPOST=0.9767;RSQ=0.9522;ERATE=0.0007;THETA=0.0005;AC=529;AN=2184 GT:DS:GL:BD 0.24221611 0
1 2944530 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9553;ERATE=0.0004;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2944593 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.794;LDAF=0.0022;AVGPOST=0.9991;RSQ=0.8104;ERATE=0.0004;THETA=0.0015;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2944594 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0056;AVGPOST=0.9983;RSQ=0.8719;ERATE=0.0004;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2944597 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8864;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2944667 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.670;LDAF=0.0030;AVGPOST=0.9956;RSQ=0.3786;ERATE=0.0005;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2944671 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2660;AVGPOST=0.9946;RSQ=0.9884;ERATE=0.0006;THETA=0.0009;AC=580;AN=2184 GT:DS:GL:BD 0.26556778 0
1 2944746 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4325;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2944781 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.4267;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2944917 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.694;LDAF=0.0109;AVGPOST=0.9915;RSQ=0.6925;ERATE=0.0009;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2944999 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5697;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2945006 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2945098 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.6296;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2945181 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.862;LDAF=0.0175;AVGPOST=0.9890;RSQ=0.7740;ERATE=0.0021;THETA=0.0007;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 2945207 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0071;AVGPOST=0.9991;RSQ=0.9422;ERATE=0.0003;THETA=0.0012;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 2945212 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.742;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7880;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2945240 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.919;LDAF=0.0245;AVGPOST=0.9981;RSQ=0.9710;ERATE=0.0003;THETA=0.0013;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 2945361 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0080;AVGPOST=0.9978;RSQ=0.8815;ERATE=0.0005;THETA=0.0008;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 2945408 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.780;LDAF=0.0077;AVGPOST=0.9963;RSQ=0.7934;ERATE=0.0007;THETA=0.0008;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 2945534 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0013;AVGPOST=0.9980;RSQ=0.3431;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2945571 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0022;AVGPOST=0.9994;RSQ=0.8852;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2945610 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.747;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4022;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2945619 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.638;LDAF=0.0068;AVGPOST=0.9936;RSQ=0.6258;ERATE=0.0004;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2945717 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.584;LDAF=0.0151;AVGPOST=0.9785;RSQ=0.4216;ERATE=0.0018;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 2945747 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.715;LDAF=0.0202;AVGPOST=0.9738;RSQ=0.4797;ERATE=0.0030;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 2945751 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.551;LDAF=0.0306;AVGPOST=0.9695;RSQ=0.6082;ERATE=0.0017;THETA=0.0005;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 2945848 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.802;BRSQ=0.412;LDAF=0.2478;AVGPOST=0.7443;RSQ=0.4326;ERATE=0.0450;THETA=0.0006;AC=380;AN=2184 GT:DS:GL:BD 0.17399268 0
1 2945904 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.937;BRSQ=0.838;LDAF=0.2532;AVGPOST=0.9732;RSQ=0.9433;ERATE=0.0023;THETA=0.0005;AC=555;AN=2184 GT:DS:GL:BD 0.25412089 0
1 2945940 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.980;LDAF=0.1491;AVGPOST=0.9926;RSQ=0.9766;ERATE=0.0007;THETA=0.0012;AC=328;AN=2184 GT:DS:GL:BD 0.15018316 0
1 2945976 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.934;BRSQ=0.833;LDAF=0.2568;AVGPOST=0.9633;RSQ=0.9300;ERATE=0.0035;THETA=0.0006;AC=561;AN=2184 GT:DS:GL:BD 0.25686812 0
1 2946181 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8808;ERATE=0.0004;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2946327 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4919;ERATE=0.0006;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2946395 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0058;AVGPOST=0.9986;RSQ=0.9066;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2946653 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0139;AVGPOST=0.9957;RSQ=0.8616;ERATE=0.0004;THETA=0.0022;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 2946672 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.5960;ERATE=0.0004;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2946726 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.3220;AVGPOST=0.9970;RSQ=0.9940;ERATE=0.0005;THETA=0.0005;AC=704;AN=2184 GT:DS:GL:BD 0.32234433 0
1 2946800 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0077;AVGPOST=0.9983;RSQ=0.9049;ERATE=0.0004;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 2946931 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0073;AVGPOST=0.9982;RSQ=0.9098;ERATE=0.0004;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 2946937 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.759;LDAF=0.0062;AVGPOST=0.9929;RSQ=0.5536;ERATE=0.0011;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2947001 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0066;AVGPOST=0.9978;RSQ=0.8667;ERATE=0.0006;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2947018 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0318;AVGPOST=0.9958;RSQ=0.9515;ERATE=0.0004;THETA=0.0008;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 2947020 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0026;AVGPOST=0.9962;RSQ=0.3920;ERATE=0.0006;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2947060 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7286;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2947062 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.942;LDAF=0.0045;AVGPOST=0.9986;RSQ=0.8749;ERATE=0.0005;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2947125 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.977;LDAF=0.0244;AVGPOST=0.9973;RSQ=0.9611;ERATE=0.0004;THETA=0.0010;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 2947349 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0025;AVGPOST=0.9982;RSQ=0.7405;ERATE=0.0005;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2947404 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0231;AVGPOST=0.9971;RSQ=0.9492;ERATE=0.0004;THETA=0.0010;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 2947419 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.987;LDAF=0.0810;AVGPOST=0.9963;RSQ=0.9817;ERATE=0.0006;THETA=0.0004;AC=176;AN=2184 GT:DS:GL:BD 0.08058608 0
1 2947467 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0678;AVGPOST=0.9938;RSQ=0.9688;ERATE=0.0004;THETA=0.0012;AC=144;AN=2184 GT:DS:GL:BD 0.06593407 0
1 2947481 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0073;AVGPOST=0.9991;RSQ=0.9413;ERATE=0.0004;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 2947574 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8351;ERATE=0.0006;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2947609 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4407;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2947666 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0044;AVGPOST=0.9986;RSQ=0.8830;ERATE=0.0005;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2947696 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0072;AVGPOST=0.9993;RSQ=0.9512;ERATE=0.0005;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 2947756 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1511;AVGPOST=0.9982;RSQ=0.9937;ERATE=0.0006;THETA=0.0004;AC=329;AN=2184 GT:DS:GL:BD 0.15064102 0
1 2947771 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0097;AVGPOST=0.9997;RSQ=0.9878;ERATE=0.0003;THETA=0.0008;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 2947893 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.834;LDAF=0.0121;AVGPOST=0.9955;RSQ=0.8502;ERATE=0.0006;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 2947909 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.3226;AVGPOST=0.9977;RSQ=0.9958;ERATE=0.0005;THETA=0.0007;AC=704;AN=2184 GT:DS:GL:BD 0.32234433 0
1 2947943 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0040;AVGPOST=0.9992;RSQ=0.9154;ERATE=0.0004;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2947963 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0017;AVGPOST=0.9978;RSQ=0.5059;ERATE=0.0006;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2947969 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.752;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4989;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2947970 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2947991 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0008;AVGPOST=0.9985;RSQ=0.1609;ERATE=0.0004;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 2947995 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.734;LDAF=0.0058;AVGPOST=0.9966;RSQ=0.7667;ERATE=0.0006;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2948000 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.8105;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2948020 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2647;AVGPOST=0.9948;RSQ=0.9885;ERATE=0.0008;THETA=0.0007;AC=575;AN=2184 GT:DS:GL:BD 0.26327839 0
1 2948032 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0155;AVGPOST=0.9889;RSQ=0.7266;ERATE=0.0014;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 2948061 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0055;AVGPOST=0.9965;RSQ=0.7481;ERATE=0.0006;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2948136 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.636;LDAF=0.0061;AVGPOST=0.9931;RSQ=0.5418;ERATE=0.0009;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2948178 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.3220;AVGPOST=0.9958;RSQ=0.9918;ERATE=0.0008;THETA=0.0016;AC=705;AN=2184 GT:DS:GL:BD 0.32280219 0
1 2948219 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0293;AVGPOST=0.9986;RSQ=0.9790;ERATE=0.0006;THETA=0.0002;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 2948227 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0024;AVGPOST=0.9980;RSQ=0.6559;ERATE=0.0005;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2948259 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.465;LDAF=0.0019;AVGPOST=0.9971;RSQ=0.3512;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2948379 . C CACCA 8240 PASS INDEL;BAVGPOST=0.992;BRSQ=0.979;LDAF=0.2460;AVGPOST=0.9859;RSQ=0.9717;ERATE=0.0013;THETA=0.0007;AC=542;AN=2184 GT:DS:GL:BD 0.24816850 0
1 2948417 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.647;LDAF=0.0049;AVGPOST=0.9946;RSQ=0.5686;ERATE=0.0006;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2948432 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.658;LDAF=0.0048;AVGPOST=0.9938;RSQ=0.4462;ERATE=0.0008;THETA=0.0014;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2948512 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.648;LDAF=0.0057;AVGPOST=0.9943;RSQ=0.5737;ERATE=0.0009;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2948532 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.879;LDAF=0.0167;AVGPOST=0.9894;RSQ=0.7902;ERATE=0.0006;THETA=0.0007;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 2948604 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.762;LDAF=0.0053;AVGPOST=0.9953;RSQ=0.6252;ERATE=0.0007;THETA=0.0014;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2948729 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4800;ERATE=0.0005;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2948741 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0107;AVGPOST=0.9980;RSQ=0.9205;ERATE=0.0006;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 2948785 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6094;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2948813 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0051;AVGPOST=0.9995;RSQ=0.9590;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2948837 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.7835;ERATE=0.0005;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2948854 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0494;AVGPOST=0.9977;RSQ=0.9798;ERATE=0.0005;THETA=0.0008;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 2948861 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.421;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5308;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2948940 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.954;LDAF=0.0111;AVGPOST=0.9986;RSQ=0.9550;ERATE=0.0004;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 2949017 . CTGGGG C 85 PASS INDEL;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0026;AVGPOST=0.9973;RSQ=0.5262;ERATE=0.0008;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2949028 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2460;AVGPOST=0.9979;RSQ=0.9955;ERATE=0.0005;THETA=0.0005;AC=537;AN=2184 GT:DS:GL:BD 0.24587911 0
1 2949057 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2949110 . GT G 274 PASS INDEL;BAVGPOST=1.000;BRSQ=0.717;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5081;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2949112 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8338;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2949187 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0216;AVGPOST=0.9993;RSQ=0.9858;ERATE=0.0004;THETA=0.0008;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 2949217 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.765;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4171;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2949264 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0094;AVGPOST=0.9992;RSQ=0.9632;ERATE=0.0003;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2949286 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4371;ERATE=0.0006;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2949352 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.964;LDAF=0.0915;AVGPOST=0.9928;RSQ=0.9680;ERATE=0.0005;THETA=0.0041;AC=199;AN=2184 GT:DS:GL:BD 0.09111722 0
1 2949355 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.2464;AVGPOST=0.9966;RSQ=0.9923;ERATE=0.0005;THETA=0.0008;AC=539;AN=2184 GT:DS:GL:BD 0.24679486 0
1 2949575 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0051;AVGPOST=0.9993;RSQ=0.9394;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2949607 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2419;AVGPOST=0.9972;RSQ=0.9935;ERATE=0.0008;THETA=0.0008;AC=529;AN=2184 GT:DS:GL:BD 0.24221611 0
1 2949644 rs58337115 G GGAGCTGCGA 2725 PASS INDEL;BAVGPOST=0.992;BRSQ=0.803;LDAF=0.0253;AVGPOST=0.9964;RSQ=0.9381;ERATE=0.0005;THETA=0.0006;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 2949651 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0486;AVGPOST=0.9993;RSQ=0.9932;ERATE=0.0004;THETA=0.0005;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 2949708 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0021;AVGPOST=0.9981;RSQ=0.6605;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2949736 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0253;AVGPOST=0.9975;RSQ=0.9584;ERATE=0.0004;THETA=0.0006;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 2949746 . ATGT A 124 PASS INDEL;BAVGPOST=0.999;BRSQ=0.864;LDAF=0.0041;AVGPOST=0.9979;RSQ=0.7740;ERATE=0.0007;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2949753 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6538;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2949793 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4988;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2949875 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.746;LDAF=0.0153;AVGPOST=0.9905;RSQ=0.7644;ERATE=0.0004;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 2949998 rs113219576 CG C 4708 PASS INDEL;BAVGPOST=0.912;BRSQ=0.813;LDAF=0.2629;AVGPOST=0.8470;RSQ=0.7050;ERATE=0.0242;THETA=0.0006;AC=546;AN=2184 GT:DS:GL:BD 0.25000000 0
1 2950067 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2472;AVGPOST=0.9977;RSQ=0.9955;ERATE=0.0004;THETA=0.0006;AC=539;AN=2184 GT:DS:GL:BD 0.24679486 0
1 2950068 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0055;AVGPOST=0.9987;RSQ=0.9132;ERATE=0.0004;THETA=0.0016;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2950094 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3231;AVGPOST=0.9967;RSQ=0.9942;ERATE=0.0010;THETA=0.0010;AC=707;AN=2184 GT:DS:GL:BD 0.32371795 0
1 2950128 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0004;AVGPOST=0.9995;RSQ=0.5697;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2950143 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7634;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2950237 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2413;AVGPOST=0.9989;RSQ=0.9974;ERATE=0.0004;THETA=0.0007;AC=527;AN=2184 GT:DS:GL:BD 0.24130036 0
1 2950277 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0057;AVGPOST=0.9979;RSQ=0.8354;ERATE=0.0005;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2950334 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2416;AVGPOST=0.9989;RSQ=0.9975;ERATE=0.0005;THETA=0.0002;AC=527;AN=2184 GT:DS:GL:BD 0.24130036 0
1 2950370 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0746;AVGPOST=0.9993;RSQ=0.9958;ERATE=0.0004;THETA=0.0005;AC=162;AN=2184 GT:DS:GL:BD 0.07417583 0
1 2950383 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5730;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2950481 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.7250;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2950594 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2421;AVGPOST=0.9984;RSQ=0.9969;ERATE=0.0004;THETA=0.0007;AC=527;AN=2184 GT:DS:GL:BD 0.24130036 0
1 2950602 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.861;LDAF=0.0074;AVGPOST=0.9987;RSQ=0.9204;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 2950618 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9545;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2950739 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.842;LDAF=0.0050;AVGPOST=0.9987;RSQ=0.9050;ERATE=0.0004;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2950764 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6894;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2950862 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5595;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2950872 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2457;AVGPOST=0.9978;RSQ=0.9953;ERATE=0.0004;THETA=0.0013;AC=537;AN=2184 GT:DS:GL:BD 0.24587911 0
1 2950886 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2408;AVGPOST=0.9983;RSQ=0.9966;ERATE=0.0004;THETA=0.0013;AC=526;AN=2184 GT:DS:GL:BD 0.24084249 0
1 2950899 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.686;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6392;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2950903 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0026;AVGPOST=0.9972;RSQ=0.5692;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2950983 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0093;AVGPOST=0.9996;RSQ=0.9840;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2951034 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2412;AVGPOST=0.9992;RSQ=0.9981;ERATE=0.0004;THETA=0.0004;AC=527;AN=2184 GT:DS:GL:BD 0.24130036 0
1 2951035 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.727;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2951041 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2470;AVGPOST=0.9988;RSQ=0.9973;ERATE=0.0004;THETA=0.0003;AC=540;AN=2184 GT:DS:GL:BD 0.24725275 0
1 2951057 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0053;AVGPOST=0.9993;RSQ=0.9451;ERATE=0.0003;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2951244 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2413;AVGPOST=0.9997;RSQ=0.9992;ERATE=0.0003;THETA=0.0005;AC=527;AN=2184 GT:DS:GL:BD 0.24130036 0
1 2951285 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6612;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2951347 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.988;LDAF=0.2411;AVGPOST=0.9989;RSQ=0.9975;ERATE=0.0004;THETA=0.0007;AC=527;AN=2184 GT:DS:GL:BD 0.24130036 0
1 2951349 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.988;LDAF=0.2408;AVGPOST=0.9975;RSQ=0.9944;ERATE=0.0008;THETA=0.0010;AC=527;AN=2184 GT:DS:GL:BD 0.24130036 0
1 2951437 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.772;LDAF=0.0066;AVGPOST=0.9957;RSQ=0.7250;ERATE=0.0020;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2951481 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0059;AVGPOST=0.9994;RSQ=0.9502;ERATE=0.0004;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2951511 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2414;AVGPOST=0.9991;RSQ=0.9980;ERATE=0.0004;THETA=0.0017;AC=527;AN=2184 GT:DS:GL:BD 0.24130036 0
1 2951543 . GC G 1079 PASS INDEL;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0074;AVGPOST=0.9989;RSQ=0.9364;ERATE=0.0004;THETA=0.0009;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 2951545 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0039;AVGPOST=0.9984;RSQ=0.8617;ERATE=0.0004;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2951722 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.727;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7386;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2951731 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0040;AVGPOST=0.9988;RSQ=0.8873;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2951745 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9987;RSQ=0.8860;ERATE=0.0003;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2951745 . CGGTG C 938 PASS INDEL;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0085;AVGPOST=0.9990;RSQ=0.9464;ERATE=0.0004;THETA=0.0008;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2951768 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0290;AVGPOST=0.9988;RSQ=0.9832;ERATE=0.0004;THETA=0.0007;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 2951806 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2457;AVGPOST=0.9989;RSQ=0.9977;ERATE=0.0005;THETA=0.0010;AC=537;AN=2184 GT:DS:GL:BD 0.24587911 0
1 2951823 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6941;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2951834 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2497;AVGPOST=0.9984;RSQ=0.9969;ERATE=0.0004;THETA=0.0008;AC=544;AN=2184 GT:DS:GL:BD 0.24908425 0
1 2951838 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8406;ERATE=0.0004;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2951925 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.848;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6398;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2951973 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0045;AVGPOST=0.9994;RSQ=0.9434;ERATE=0.0004;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2951989 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2416;AVGPOST=0.9980;RSQ=0.9959;ERATE=0.0005;THETA=0.0004;AC=526;AN=2184 GT:DS:GL:BD 0.24084249 0
1 2952159 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.764;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4794;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2952303 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9999;AVGPOST=0.9998;RSQ=0.0498;ERATE=0.0003;THETA=0.0008;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 2952404 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.972;LDAF=0.0114;AVGPOST=0.9979;RSQ=0.9281;ERATE=0.0015;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 2952422 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.5192;ERATE=0.0004;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2952504 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0036;AVGPOST=0.9986;RSQ=0.8162;ERATE=0.0008;THETA=0.0034;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2952542 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.5772;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2952589 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.760;LDAF=0.0022;AVGPOST=0.9982;RSQ=0.6868;ERATE=0.0006;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2952614 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.3551;AVGPOST=0.9954;RSQ=0.9925;ERATE=0.0007;THETA=0.0007;AC=778;AN=2184 GT:DS:GL:BD 0.35622710 0
1 2952807 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7000;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2952823 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2407;AVGPOST=0.9984;RSQ=0.9962;ERATE=0.0006;THETA=0.0006;AC=526;AN=2184 GT:DS:GL:BD 0.24084249 0
1 2952840 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2410;AVGPOST=0.9983;RSQ=0.9959;ERATE=0.0007;THETA=0.0010;AC=526;AN=2184 GT:DS:GL:BD 0.24084249 0
1 2952855 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.764;LDAF=0.0047;AVGPOST=0.9978;RSQ=0.8037;ERATE=0.0004;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2952861 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0061;AVGPOST=0.9996;RSQ=0.9680;ERATE=0.0004;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2952986 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.469;LDAF=0.0097;AVGPOST=0.9872;RSQ=0.4907;ERATE=0.0027;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2952993 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0112;AVGPOST=0.9996;RSQ=0.9865;ERATE=0.0004;THETA=0.0008;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 2953029 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.962;LDAF=0.0318;AVGPOST=0.9935;RSQ=0.9253;ERATE=0.0011;THETA=0.0003;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 2953143 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0756;AVGPOST=0.9967;RSQ=0.9813;ERATE=0.0007;THETA=0.0003;AC=162;AN=2184 GT:DS:GL:BD 0.07417583 0
1 2953168 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0034;AVGPOST=0.9966;RSQ=0.6074;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2953324 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5775;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2953402 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.949;LDAF=0.0119;AVGPOST=0.9979;RSQ=0.9258;ERATE=0.0005;THETA=0.0008;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 2953471 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.643;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.6993;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2953533 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5898;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2953534 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0008;AVGPOST=0.9989;RSQ=0.3976;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2953589 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0071;AVGPOST=0.9978;RSQ=0.8979;ERATE=0.0004;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2953617 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5446;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2953627 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0219;AVGPOST=0.9989;RSQ=0.9784;ERATE=0.0004;THETA=0.0005;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 2953697 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.807;LDAF=0.0058;AVGPOST=0.9927;RSQ=0.4877;ERATE=0.0021;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2953721 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.686;LDAF=0.0050;AVGPOST=0.9956;RSQ=0.6659;ERATE=0.0007;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2953745 rs33970635 G GC 11759 PASS INDEL;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.2447;AVGPOST=0.9961;RSQ=0.9917;ERATE=0.0006;THETA=0.0005;AC=536;AN=2184 GT:DS:GL:BD 0.24542125 0
1 2953833 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.2410;AVGPOST=0.9954;RSQ=0.9905;ERATE=0.0011;THETA=0.0006;AC=526;AN=2184 GT:DS:GL:BD 0.24084249 0
1 2953887 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0124;AVGPOST=0.9978;RSQ=0.9329;ERATE=0.0006;THETA=0.0017;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 2954016 . A AC 18 PASS INDEL;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.3666;ERATE=0.0006;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2954017 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0084;AVGPOST=0.9995;RSQ=0.9692;ERATE=0.0004;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 2954031 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.969;LDAF=0.2345;AVGPOST=0.9869;RSQ=0.9738;ERATE=0.0011;THETA=0.0010;AC=516;AN=2184 GT:DS:GL:BD 0.23626374 0
1 2954047 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.963;LDAF=0.2346;AVGPOST=0.9895;RSQ=0.9799;ERATE=0.0004;THETA=0.0003;AC=515;AN=2184 GT:DS:GL:BD 0.23580585 0
1 2954051 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.963;LDAF=0.2303;AVGPOST=0.9878;RSQ=0.9769;ERATE=0.0004;THETA=0.0007;AC=503;AN=2184 GT:DS:GL:BD 0.23031135 0
1 2954052 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.680;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.5638;ERATE=0.0010;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2954055 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.963;LDAF=0.2291;AVGPOST=0.9876;RSQ=0.9760;ERATE=0.0007;THETA=0.0005;AC=501;AN=2184 GT:DS:GL:BD 0.22939560 0
1 2954061 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.967;LDAF=0.3105;AVGPOST=0.9888;RSQ=0.9819;ERATE=0.0004;THETA=0.0020;AC=681;AN=2184 GT:DS:GL:BD 0.31181318 0
1 2954123 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2418;AVGPOST=0.9953;RSQ=0.9900;ERATE=0.0008;THETA=0.0008;AC=528;AN=2184 GT:DS:GL:BD 0.24175824 0
1 2954165 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.2421;AVGPOST=0.9962;RSQ=0.9919;ERATE=0.0007;THETA=0.0008;AC=528;AN=2184 GT:DS:GL:BD 0.24175824 0
1 2954203 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.988;LDAF=0.1508;AVGPOST=0.9968;RSQ=0.9893;ERATE=0.0003;THETA=0.0007;AC=329;AN=2184 GT:DS:GL:BD 0.15064102 0
1 2954208 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2404;AVGPOST=0.9970;RSQ=0.9938;ERATE=0.0004;THETA=0.0007;AC=525;AN=2184 GT:DS:GL:BD 0.24038461 0
1 2954230 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2407;AVGPOST=0.9974;RSQ=0.9947;ERATE=0.0004;THETA=0.0007;AC=526;AN=2184 GT:DS:GL:BD 0.24084249 0
1 2954286 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0048;AVGPOST=0.9991;RSQ=0.9176;ERATE=0.0004;THETA=0.0019;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2954297 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2406;AVGPOST=0.9981;RSQ=0.9961;ERATE=0.0005;THETA=0.0009;AC=525;AN=2184 GT:DS:GL:BD 0.24038461 0
1 2954328 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0021;AVGPOST=0.9975;RSQ=0.5246;ERATE=0.0007;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2954366 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.895;LDAF=0.1893;AVGPOST=0.9708;RSQ=0.9141;ERATE=0.0023;THETA=0.0006;AC=415;AN=2184 GT:DS:GL:BD 0.19001831 0
1 2954367 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0046;AVGPOST=0.9993;RSQ=0.9330;ERATE=0.0004;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2954378 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.964;BRSQ=0.854;LDAF=0.1901;AVGPOST=0.9735;RSQ=0.9218;ERATE=0.0011;THETA=0.0008;AC=419;AN=2184 GT:DS:GL:BD 0.19184981 0
1 2954439 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8800;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2954450 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0059;AVGPOST=0.9966;RSQ=0.7559;ERATE=0.0010;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2954567 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9857;ERATE=0.0003;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2954647 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.767;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7370;ERATE=0.0006;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2954716 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2954732 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0033;AVGPOST=0.9979;RSQ=0.7296;ERATE=0.0007;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2954754 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.802;LDAF=0.0053;AVGPOST=0.9939;RSQ=0.5637;ERATE=0.0008;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2954813 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.597;LDAF=0.0030;AVGPOST=0.9971;RSQ=0.6041;ERATE=0.0005;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2954889 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4841;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2954913 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0028;AVGPOST=0.9980;RSQ=0.7129;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2954931 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0020;AVGPOST=0.9980;RSQ=0.5494;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2955079 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5409;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2955157 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0027;AVGPOST=0.9965;RSQ=0.5043;ERATE=0.0009;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2955158 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2429;AVGPOST=0.9974;RSQ=0.9945;ERATE=0.0005;THETA=0.0005;AC=530;AN=2184 GT:DS:GL:BD 0.24267399 0
1 2955162 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.839;LDAF=0.0043;AVGPOST=0.9984;RSQ=0.8224;ERATE=0.0006;THETA=0.0013;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2955227 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.643;LDAF=0.0032;AVGPOST=0.9946;RSQ=0.3825;ERATE=0.0010;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2955245 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0744;AVGPOST=0.9984;RSQ=0.9906;ERATE=0.0003;THETA=0.0007;AC=162;AN=2184 GT:DS:GL:BD 0.07417583 0
1 2955403 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.7700;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2955531 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0208;AVGPOST=0.9985;RSQ=0.9686;ERATE=0.0005;THETA=0.0009;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 2955546 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.0886;AVGPOST=0.9948;RSQ=0.9770;ERATE=0.0007;THETA=0.0004;AC=194;AN=2184 GT:DS:GL:BD 0.08882784 0
1 2955695 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=0.9975;RSQ=0.7673;ERATE=0.0005;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2955703 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0211;AVGPOST=0.9978;RSQ=0.9566;ERATE=0.0007;THETA=0.0017;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 2955704 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.771;LDAF=0.0049;AVGPOST=0.9948;RSQ=0.6306;ERATE=0.0008;THETA=0.0012;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2955742 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.984;LDAF=0.0780;AVGPOST=0.9970;RSQ=0.9863;ERATE=0.0005;THETA=0.0010;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 2955776 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0195;AVGPOST=0.9986;RSQ=0.9707;ERATE=0.0004;THETA=0.0007;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 2955799 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.794;LDAF=0.0049;AVGPOST=0.9942;RSQ=0.5174;ERATE=0.0017;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2955828 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.798;LDAF=0.0181;AVGPOST=0.9890;RSQ=0.7539;ERATE=0.0010;THETA=0.0033;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 2955904 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0027;AVGPOST=0.9980;RSQ=0.6754;ERATE=0.0006;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2955929 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.907;LDAF=0.0644;AVGPOST=0.9959;RSQ=0.9742;ERATE=0.0004;THETA=0.0008;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 2955930 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2412;AVGPOST=0.9958;RSQ=0.9907;ERATE=0.0007;THETA=0.0004;AC=526;AN=2184 GT:DS:GL:BD 0.24084249 0
1 2955988 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0209;AVGPOST=0.9964;RSQ=0.9311;ERATE=0.0006;THETA=0.0008;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 2956163 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2403;AVGPOST=0.9965;RSQ=0.9928;ERATE=0.0006;THETA=0.0036;AC=525;AN=2184 GT:DS:GL:BD 0.24038461 0
1 2956220 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2956432 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0045;AVGPOST=0.9998;RSQ=0.9785;ERATE=0.0003;THETA=0.0011;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2956564 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2956581 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.8958;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2956582 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2439;AVGPOST=0.9987;RSQ=0.9977;ERATE=0.0004;THETA=0.0004;AC=532;AN=2184 GT:DS:GL:BD 0.24358974 0
1 2956642 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.8941;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2956666 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3617;AVGPOST=0.9973;RSQ=0.9966;ERATE=0.0003;THETA=0.0004;AC=791;AN=2184 GT:DS:GL:BD 0.36217949 0
1 2956667 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.8005;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2956668 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8300;ERATE=0.0008;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2956758 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2956760 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.881;LDAF=0.0055;AVGPOST=0.9985;RSQ=0.8622;ERATE=0.0007;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2956773 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.824;LDAF=0.0030;AVGPOST=0.9989;RSQ=0.8514;ERATE=0.0004;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2956810 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.982;LDAF=0.0297;AVGPOST=0.9991;RSQ=0.9867;ERATE=0.0004;THETA=0.0016;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 2956991 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.904;LDAF=0.0171;AVGPOST=0.9968;RSQ=0.9287;ERATE=0.0004;THETA=0.0005;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 2956999 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2389;AVGPOST=0.9988;RSQ=0.9971;ERATE=0.0004;THETA=0.0008;AC=522;AN=2184 GT:DS:GL:BD 0.23901099 0
1 2957049 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5713;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2957095 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8296;ERATE=0.0004;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2957122 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2957133 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.957;LDAF=0.0235;AVGPOST=0.9976;RSQ=0.9563;ERATE=0.0004;THETA=0.0004;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 2957150 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6347;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2957202 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9577;ERATE=0.0004;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 2957404 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0886;AVGPOST=0.9995;RSQ=0.9974;ERATE=0.0003;THETA=0.0013;AC=194;AN=2184 GT:DS:GL:BD 0.08882784 0
1 2957486 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0091;AVGPOST=0.9982;RSQ=0.9209;ERATE=0.0004;THETA=0.0013;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 2957600 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2434;AVGPOST=0.9989;RSQ=0.9975;ERATE=0.0004;THETA=0.0005;AC=532;AN=2184 GT:DS:GL:BD 0.24358974 0
1 2957674 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2957766 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6122;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2957835 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0035;AVGPOST=0.9989;RSQ=0.8696;ERATE=0.0004;THETA=0.0012;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2957925 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0190;AVGPOST=0.9989;RSQ=0.9752;ERATE=0.0004;THETA=0.0007;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 2957931 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4468;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2957962 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0022;AVGPOST=0.9978;RSQ=0.6433;ERATE=0.0006;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2958021 . CT C 86 PASS INDEL;BAVGPOST=0.999;BRSQ=0.698;LDAF=0.0012;AVGPOST=0.9981;RSQ=0.3697;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2958059 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2958091 . CTCTTTA C 92 PASS INDEL;BAVGPOST=0.999;BRSQ=0.768;LDAF=0.0020;AVGPOST=0.9978;RSQ=0.5493;ERATE=0.0007;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2958111 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0058;AVGPOST=0.9984;RSQ=0.8816;ERATE=0.0004;THETA=0.0023;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 2958185 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9181;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2958271 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0114;AVGPOST=0.9976;RSQ=0.9149;ERATE=0.0003;THETA=0.0007;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 2958394 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0020;AVGPOST=0.9980;RSQ=0.6198;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2958531 . T TTTTTC 37387 PASS INDEL;BAVGPOST=0.977;BRSQ=0.952;LDAF=0.3068;AVGPOST=0.9683;RSQ=0.9438;ERATE=0.0067;THETA=0.0004;AC=677;AN=2184 GT:DS:GL:BD 0.30998167 0
1 2958627 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0097;AVGPOST=0.9983;RSQ=0.9199;ERATE=0.0005;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2958708 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.947;LDAF=0.2427;AVGPOST=0.9953;RSQ=0.9892;ERATE=0.0007;THETA=0.0006;AC=532;AN=2184 GT:DS:GL:BD 0.24358974 0
1 2958747 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2958806 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.769;LDAF=0.0031;AVGPOST=0.9966;RSQ=0.5927;ERATE=0.0007;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2958835 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2958856 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.905;LDAF=0.0182;AVGPOST=0.9947;RSQ=0.8831;ERATE=0.0006;THETA=0.0007;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 2959010 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0295;AVGPOST=0.9985;RSQ=0.9803;ERATE=0.0003;THETA=0.0005;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 2959157 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.765;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6966;ERATE=0.0005;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2959197 . CG C 304 PASS INDEL;BAVGPOST=0.974;BRSQ=0.628;LDAF=0.0459;AVGPOST=0.9579;RSQ=0.6270;ERATE=0.0042;THETA=0.0008;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 2959202 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.953;BRSQ=0.674;LDAF=0.0945;AVGPOST=0.9261;RSQ=0.6633;ERATE=0.0077;THETA=0.0004;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 2959211 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.773;LDAF=0.0663;AVGPOST=0.9675;RSQ=0.8002;ERATE=0.0023;THETA=0.0009;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 2959215 . C CT 4317 PASS INDEL;BAVGPOST=0.936;BRSQ=0.698;LDAF=0.1518;AVGPOST=0.9002;RSQ=0.6821;ERATE=0.0146;THETA=0.0006;AC=283;AN=2184 GT:DS:GL:BD 0.12957875 0
1 2959217 . GCAT G 219 PASS INDEL;BAVGPOST=0.962;BRSQ=0.417;LDAF=0.0682;AVGPOST=0.9061;RSQ=0.3994;ERATE=0.0169;THETA=0.0008;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 2959228 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.967;BRSQ=0.810;LDAF=0.0967;AVGPOST=0.9603;RSQ=0.8281;ERATE=0.0015;THETA=0.0009;AC=202;AN=2184 GT:DS:GL:BD 0.09249084 0
1 2959259 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0223;AVGPOST=0.9983;RSQ=0.9716;ERATE=0.0004;THETA=0.0005;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 2959266 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0911;AVGPOST=0.9971;RSQ=0.9874;ERATE=0.0004;THETA=0.0009;AC=198;AN=2184 GT:DS:GL:BD 0.09065934 0
1 2959453 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0236;AVGPOST=0.9990;RSQ=0.9832;ERATE=0.0004;THETA=0.0012;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 2959508 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0034;AVGPOST=0.9975;RSQ=0.7557;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2959610 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2926;AVGPOST=0.9986;RSQ=0.9969;ERATE=0.0004;THETA=0.0006;AC=639;AN=2184 GT:DS:GL:BD 0.29258242 0
1 2959637 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5518;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2959648 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.776;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5756;ERATE=0.0004;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2959671 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.271;LDAF=0.0017;AVGPOST=0.9976;RSQ=0.3918;ERATE=0.0006;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2959696 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2959717 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0060;AVGPOST=0.9996;RSQ=0.9712;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2959719 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0027;AVGPOST=0.9989;RSQ=0.8475;ERATE=0.0004;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2959783 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0023;AVGPOST=0.9984;RSQ=0.7469;ERATE=0.0007;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2959839 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8619;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2959871 . T TC 17 PASS INDEL;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.5172;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2959916 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0027;AVGPOST=0.9979;RSQ=0.7309;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2959949 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0039;AVGPOST=0.9982;RSQ=0.8087;ERATE=0.0004;THETA=0.0014;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2960021 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.895;LDAF=0.0114;AVGPOST=0.9969;RSQ=0.8835;ERATE=0.0005;THETA=0.0008;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 2960192 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.974;LDAF=0.1487;AVGPOST=0.9950;RSQ=0.9852;ERATE=0.0008;THETA=0.0007;AC=326;AN=2184 GT:DS:GL:BD 0.14926741 0
1 2960196 . T TCAAACAAA 37887 PASS INDEL;BAVGPOST=0.955;BRSQ=0.906;LDAF=0.2752;AVGPOST=0.9763;RSQ=0.9566;ERATE=0.0027;THETA=0.0005;AC=613;AN=2184 GT:DS:GL:BD 0.28067765 0
1 2960356 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8524;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2960372 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2427;AVGPOST=0.9979;RSQ=0.9952;ERATE=0.0007;THETA=0.0004;AC=531;AN=2184 GT:DS:GL:BD 0.24313186 0
1 2960407 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0044;AVGPOST=0.9982;RSQ=0.8382;ERATE=0.0004;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2960608 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1507;AVGPOST=0.9988;RSQ=0.9964;ERATE=0.0004;THETA=0.0006;AC=328;AN=2184 GT:DS:GL:BD 0.15018316 0
1 2960656 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0103;AVGPOST=0.9984;RSQ=0.9384;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 2960678 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.857;LDAF=0.0143;AVGPOST=0.9947;RSQ=0.8459;ERATE=0.0006;THETA=0.0008;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 2960761 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5301;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2960790 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.986;LDAF=0.2389;AVGPOST=0.9917;RSQ=0.9840;ERATE=0.0013;THETA=0.0004;AC=526;AN=2184 GT:DS:GL:BD 0.24084249 0
1 2960889 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2960933 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0287;AVGPOST=0.9993;RSQ=0.9896;ERATE=0.0004;THETA=0.0002;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 2961023 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0749;AVGPOST=0.9995;RSQ=0.9972;ERATE=0.0004;THETA=0.0003;AC=163;AN=2184 GT:DS:GL:BD 0.07463370 0
1 2961079 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.794;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.5137;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2961104 . CAG C 25 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.6260;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2961235 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0294;AVGPOST=0.9994;RSQ=0.9907;ERATE=0.0004;THETA=0.0004;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 2961274 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7101;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2961284 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8681;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2961355 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0023;AVGPOST=0.9987;RSQ=0.7951;ERATE=0.0009;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2961370 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0750;AVGPOST=0.9998;RSQ=0.9989;ERATE=0.0003;THETA=0.0004;AC=163;AN=2184 GT:DS:GL:BD 0.07463370 0
1 2961402 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2398;AVGPOST=0.9969;RSQ=0.9937;ERATE=0.0014;THETA=0.0005;AC=523;AN=2184 GT:DS:GL:BD 0.23946886 0
1 2961485 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6282;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2961525 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.688;LDAF=0.0018;AVGPOST=0.9978;RSQ=0.5484;ERATE=0.0005;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2961542 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0636;AVGPOST=0.9994;RSQ=0.9958;ERATE=0.0003;THETA=0.0006;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 2961574 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0036;AVGPOST=0.9985;RSQ=0.8515;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2961579 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5953;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2961854 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0021;AVGPOST=0.9974;RSQ=0.5348;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2961877 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0762;AVGPOST=0.9992;RSQ=0.9962;ERATE=0.0003;THETA=0.0010;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 2961913 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2961920 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0047;AVGPOST=0.9987;RSQ=0.8932;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 2962077 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.855;LDAF=0.0044;AVGPOST=0.9973;RSQ=0.7830;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 2962099 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0636;AVGPOST=0.9997;RSQ=0.9977;ERATE=0.0003;THETA=0.0014;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 2962174 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0212;AVGPOST=0.9986;RSQ=0.9801;ERATE=0.0003;THETA=0.0005;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 2962207 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3123;AVGPOST=0.9984;RSQ=0.9967;ERATE=0.0004;THETA=0.0004;AC=682;AN=2184 GT:DS:GL:BD 0.31227106 0
1 2962225 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1509;AVGPOST=0.9995;RSQ=0.9984;ERATE=0.0003;THETA=0.0004;AC=329;AN=2184 GT:DS:GL:BD 0.15064102 0
1 2962319 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0047;AVGPOST=0.9984;RSQ=0.8471;ERATE=0.0005;THETA=0.0015;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 2962359 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.9013;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2962543 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6808;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2962592 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.9986;AVGPOST=0.9990;RSQ=0.7016;ERATE=0.0004;THETA=0.0005;AC=2182;AN=2184 GT:DS:GL:BD 0.99908423 1
1 2962602 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.750;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2962611 . CA C 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.715;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4530;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2962691 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.839;LDAF=0.0036;AVGPOST=0.9974;RSQ=0.7180;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 2962929 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4487;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2963015 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0204;AVGPOST=0.9994;RSQ=0.9860;ERATE=0.0004;THETA=0.0003;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 2963060 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0501;AVGPOST=0.9994;RSQ=0.9942;ERATE=0.0004;THETA=0.0004;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 2963065 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0045;AVGPOST=0.9968;RSQ=0.7213;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 2963075 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0030;AVGPOST=0.9984;RSQ=0.8058;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2963125 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.4912;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2963174 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0083;AVGPOST=0.9989;RSQ=0.9447;ERATE=0.0003;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 2963201 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=0.9984;RSQ=0.8792;ERATE=0.0005;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 2963249 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4005;ERATE=0.0006;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2963327 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0014;AVGPOST=0.9993;RSQ=0.7843;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2963360 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5895;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 2963477 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0104;AVGPOST=0.9973;RSQ=0.9007;ERATE=0.0004;THETA=0.0007;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2963493 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.3182;AVGPOST=0.9968;RSQ=0.9943;ERATE=0.0007;THETA=0.0005;AC=695;AN=2184 GT:DS:GL:BD 0.31822345 0
1 2963517 . A AC 34 PASS INDEL;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0018;AVGPOST=0.9988;RSQ=0.7100;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2963531 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0201;AVGPOST=0.9995;RSQ=0.9899;ERATE=0.0003;THETA=0.0003;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 2963710 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0031;AVGPOST=0.9990;RSQ=0.8744;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2963933 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0757;AVGPOST=0.9989;RSQ=0.9941;ERATE=0.0004;THETA=0.0007;AC=165;AN=2184 GT:DS:GL:BD 0.07554945 0
1 2963978 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7418;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 2964051 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5519;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2964096 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.726;LDAF=0.0011;AVGPOST=0.9984;RSQ=0.3707;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 2964137 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.830;LDAF=0.0028;AVGPOST=0.9975;RSQ=0.6398;ERATE=0.0010;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 2964170 . G GA 504 PASS INDEL;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0113;AVGPOST=0.9940;RSQ=0.8021;ERATE=0.0006;THETA=0.0025;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 2964286 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.933;LDAF=0.0226;AVGPOST=0.9967;RSQ=0.9474;ERATE=0.0003;THETA=0.0004;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 2964358 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0244;AVGPOST=0.9992;RSQ=0.9852;ERATE=0.0004;THETA=0.0006;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 2964380 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.9149;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 2964397 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1503;AVGPOST=0.9990;RSQ=0.9969;ERATE=0.0004;THETA=0.0002;AC=327;AN=2184 GT:DS:GL:BD 0.14972527 0
1 2964435 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0