1092
10000
1 227021616 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0969;AVGPOST=0.9927;RSQ=0.9702;ERATE=0.0002;THETA=0.0004;AC=209;AN=2184 GT:DS:GL:BD 0.09569597 0
1 227021655 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0063;AVGPOST=0.9994;RSQ=0.9675;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227021688 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0064;AVGPOST=0.9978;RSQ=0.8434;ERATE=0.0007;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227021709 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1652;AVGPOST=0.9978;RSQ=0.9929;ERATE=0.0004;THETA=0.0005;AC=361;AN=2184 GT:DS:GL:BD 0.16529304 0
1 227021760 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0237;AVGPOST=0.9993;RSQ=0.9907;ERATE=0.0002;THETA=0.0004;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 227021777 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.7205;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227021913 . T TC 176 PASS INDEL;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227021975 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.811;LDAF=0.0051;AVGPOST=0.9979;RSQ=0.8291;ERATE=0.0004;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227022068 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.844;LDAF=0.0062;AVGPOST=0.9975;RSQ=0.8302;ERATE=0.0005;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227022250 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.550;LDAF=0.0020;AVGPOST=0.9984;RSQ=0.6601;ERATE=0.0007;THETA=0.0016;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227022341 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9743;ERATE=0.0002;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227022354 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227022375 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227022605 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0048;AVGPOST=0.9950;RSQ=0.6557;ERATE=0.0006;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227022681 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0234;AVGPOST=0.9995;RSQ=0.9910;ERATE=0.0003;THETA=0.0004;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 227022709 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0234;AVGPOST=0.9995;RSQ=0.9917;ERATE=0.0003;THETA=0.0003;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 227022797 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6122;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227022821 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0022;AVGPOST=0.9991;RSQ=0.8431;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227022822 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.795;LDAF=0.0048;AVGPOST=0.9984;RSQ=0.8875;ERATE=0.0003;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227022861 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.783;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7265;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227022867 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.775;LDAF=0.0021;AVGPOST=0.9977;RSQ=0.5686;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227022978 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.806;LDAF=0.0024;AVGPOST=0.9986;RSQ=0.7478;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227023043 . AG A 40 PASS INDEL;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5157;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227023123 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0041;AVGPOST=0.9961;RSQ=0.6432;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227023126 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0015;AVGPOST=0.9981;RSQ=0.5380;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227023251 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.820;LDAF=0.0058;AVGPOST=0.9977;RSQ=0.8550;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227023400 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0188;AVGPOST=0.9995;RSQ=0.9881;ERATE=0.0003;THETA=0.0006;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 227023519 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227023585 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.636;LDAF=0.0082;AVGPOST=0.9949;RSQ=0.7716;ERATE=0.0004;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 227023762 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.985;LDAF=0.2526;AVGPOST=0.9954;RSQ=0.9906;ERATE=0.0005;THETA=0.0006;AC=552;AN=2184 GT:DS:GL:BD 0.25274727 0
1 227023776 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8348;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227023858 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0189;AVGPOST=0.9997;RSQ=0.9917;ERATE=0.0003;THETA=0.0003;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 227023884 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.4453;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227023903 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0052;AVGPOST=0.9973;RSQ=0.8146;ERATE=0.0003;THETA=0.0014;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227023937 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6526;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227024045 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2519;AVGPOST=0.9966;RSQ=0.9924;ERATE=0.0004;THETA=0.0005;AC=551;AN=2184 GT:DS:GL:BD 0.25228938 0
1 227024090 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6863;ERATE=0.0002;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227024257 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8940;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227024333 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.5697;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227024387 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.832;LDAF=0.0001;AVGPOST=0.9998;RSQ=0.0784;ERATE=0.0003;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 227024542 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.635;LDAF=0.0021;AVGPOST=0.9976;RSQ=0.5139;ERATE=0.0007;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227024734 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0182;AVGPOST=0.9993;RSQ=0.9860;ERATE=0.0003;THETA=0.0005;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 227024785 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0124;AVGPOST=0.9992;RSQ=0.9785;ERATE=0.0002;THETA=0.0006;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 227024891 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0238;AVGPOST=0.9993;RSQ=0.9894;ERATE=0.0002;THETA=0.0003;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 227024914 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7434;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227025112 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0188;AVGPOST=0.9989;RSQ=0.9806;ERATE=0.0003;THETA=0.0004;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 227025430 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0035;AVGPOST=0.9975;RSQ=0.7036;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227025463 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0062;AVGPOST=0.9989;RSQ=0.9258;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227025508 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0048;AVGPOST=0.9973;RSQ=0.8037;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227025571 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5514;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227025608 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0130;AVGPOST=0.9995;RSQ=0.9808;ERATE=0.0003;THETA=0.0007;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 227025611 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7973;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227025732 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.655;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7585;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227025835 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0130;AVGPOST=0.9993;RSQ=0.9768;ERATE=0.0003;THETA=0.0013;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 227025947 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6846;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227025987 . CCT C 42 PASS INDEL;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0021;AVGPOST=0.9976;RSQ=0.5863;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227026091 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7002;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227026130 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0185;AVGPOST=0.9993;RSQ=0.9875;ERATE=0.0002;THETA=0.0011;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 227026200 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8303;ERATE=0.0002;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227026227 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0047;AVGPOST=0.9978;RSQ=0.8417;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227026297 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227026500 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.727;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7348;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227026672 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8343;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227026755 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0017;AVGPOST=0.9988;RSQ=0.6895;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227026833 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227026856 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7311;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227026893 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0238;AVGPOST=0.9999;RSQ=0.9984;ERATE=0.0002;THETA=0.0003;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 227026993 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0063;AVGPOST=0.9993;RSQ=0.9530;ERATE=0.0002;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227027166 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0117;AVGPOST=0.9982;RSQ=0.9337;ERATE=0.0006;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227027173 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0037;AVGPOST=0.9980;RSQ=0.7932;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227027295 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0033;AVGPOST=0.9968;RSQ=0.6259;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227027304 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.979;LDAF=0.1339;AVGPOST=0.9960;RSQ=0.9873;ERATE=0.0005;THETA=0.0005;AC=292;AN=2184 GT:DS:GL:BD 0.13369964 0
1 227027325 rs55832726 C CA 1431 PASS INDEL;BAVGPOST=0.554;BRSQ=0.195;LDAF=0.4145;AVGPOST=0.6509;RSQ=0.3517;ERATE=0.0472;THETA=0.0012;AC=769;AN=2184 GT:DS:GL:BD 0.35210621 0
1 227027422 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7739;ERATE=0.0003;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227027473 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8571;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227027478 . GACTA G 425 PASS INDEL;BAVGPOST=0.997;BRSQ=0.739;LDAF=0.0080;AVGPOST=0.9969;RSQ=0.8290;ERATE=0.0009;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 227027590 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.988;LDAF=0.4920;AVGPOST=0.9798;RSQ=0.9683;ERATE=0.0012;THETA=0.0039;AC=1078;AN=2184 GT:DS:GL:BD 0.49358973 0
1 227027591 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0021;AVGPOST=0.9980;RSQ=0.6571;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227027654 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0030;AVGPOST=0.9992;RSQ=0.8786;ERATE=0.0004;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227027686 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.667;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4900;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227027740 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.671;LDAF=0.0063;AVGPOST=0.9954;RSQ=0.7335;ERATE=0.0005;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227027779 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6441;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227027791 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9547;ERATE=0.0002;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227027803 . G GT 3871 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0239;AVGPOST=0.9995;RSQ=0.9903;ERATE=0.0003;THETA=0.0005;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 227027854 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8499;ERATE=0.0002;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227027942 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0003;AVGPOST=0.9994;RSQ=0.4163;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 227027965 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227027984 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0047;AVGPOST=0.9990;RSQ=0.9289;ERATE=0.0002;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227028024 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6441;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227028252 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9483;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227028287 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1490;AVGPOST=0.9988;RSQ=0.9962;ERATE=0.0003;THETA=0.0009;AC=326;AN=2184 GT:DS:GL:BD 0.14926741 0
1 227028348 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.727;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5543;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227028358 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.860;LDAF=0.0092;AVGPOST=0.9967;RSQ=0.8665;ERATE=0.0004;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 227028422 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227028465 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.6279;ERATE=0.0007;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227028476 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0033;AVGPOST=0.9986;RSQ=0.8373;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227028534 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.648;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8990;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227028745 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2599;AVGPOST=0.9972;RSQ=0.9937;ERATE=0.0005;THETA=0.0022;AC=568;AN=2184 GT:DS:GL:BD 0.26007327 0
1 227028829 . T TAC 2134 PASS INDEL;BAVGPOST=0.867;BRSQ=0.601;LDAF=0.2377;AVGPOST=0.8339;RSQ=0.6142;ERATE=0.0337;THETA=0.0004;AC=455;AN=2184 GT:DS:GL:BD 0.20833333 0
1 227029583 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.803;LDAF=0.0040;AVGPOST=0.9981;RSQ=0.8050;ERATE=0.0004;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227029587 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0052;AVGPOST=0.9997;RSQ=0.9708;ERATE=0.0002;THETA=0.0014;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227029617 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6426;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227029641 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.5908;ERATE=0.0004;THETA=0.0026;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227029710 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.874;BRSQ=0.717;LDAF=0.4055;AVGPOST=0.8086;RSQ=0.6490;ERATE=0.0806;THETA=0.0010;AC=832;AN=2184 GT:DS:GL:BD 0.38095239 0
1 227029733 . A ACG 210 PASS INDEL;BAVGPOST=0.962;BRSQ=0.502;LDAF=0.0533;AVGPOST=0.9431;RSQ=0.5833;ERATE=0.0057;THETA=0.0006;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 227029750 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.849;LDAF=0.0383;AVGPOST=0.9761;RSQ=0.7728;ERATE=0.0033;THETA=0.0011;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 227029766 . CAT C 599 PASS INDEL;BAVGPOST=0.988;BRSQ=0.692;LDAF=0.0247;AVGPOST=0.9899;RSQ=0.8459;ERATE=0.0009;THETA=0.0003;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 227029776 . CAT C 22 PASS INDEL;BAVGPOST=0.989;BRSQ=0.468;LDAF=0.0097;AVGPOST=0.9892;RSQ=0.6082;ERATE=0.0005;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227029786 . C CAT 582 PASS INDEL;BAVGPOST=0.970;BRSQ=0.599;LDAF=0.0658;AVGPOST=0.9339;RSQ=0.5813;ERATE=0.0096;THETA=0.0004;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 227029804 . CAT C 411 PASS INDEL;BAVGPOST=0.924;BRSQ=0.736;LDAF=0.1355;AVGPOST=0.9520;RSQ=0.8543;ERATE=0.0006;THETA=0.0005;AC=296;AN=2184 GT:DS:GL:BD 0.13553114 0
1 227029808 rs72262357 TAC T 11500 PASS INDEL;BAVGPOST=0.952;BRSQ=0.867;LDAF=0.2010;AVGPOST=0.9628;RSQ=0.9141;ERATE=0.0040;THETA=0.0029;AC=443;AN=2184 GT:DS:GL:BD 0.20283882 0
1 227029814 . CACAT C 1616 PASS INDEL;BAVGPOST=0.964;BRSQ=0.668;LDAF=0.0717;AVGPOST=0.9378;RSQ=0.6366;ERATE=0.0106;THETA=0.0004;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 227029816 . CAT C 858 PASS INDEL;BAVGPOST=0.919;BRSQ=0.745;LDAF=0.1511;AVGPOST=0.9500;RSQ=0.8577;ERATE=0.0009;THETA=0.0003;AC=339;AN=2184 GT:DS:GL:BD 0.15521978 0
1 227029870 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.578;LDAF=0.0101;AVGPOST=0.9904;RSQ=0.6474;ERATE=0.0007;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227029875 . A AC 22 PASS INDEL;BAVGPOST=1.000;BRSQ=0.740;LDAF=0.0021;AVGPOST=0.9968;RSQ=0.3643;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227029896 . T TAC 9889 PASS INDEL;BAVGPOST=0.974;BRSQ=0.906;LDAF=0.1801;AVGPOST=0.9569;RSQ=0.8847;ERATE=0.0039;THETA=0.0005;AC=374;AN=2184 GT:DS:GL:BD 0.17124543 0
1 227029908 . CAT C 884 PASS INDEL;BAVGPOST=0.952;BRSQ=0.604;LDAF=0.0948;AVGPOST=0.9013;RSQ=0.5733;ERATE=0.0052;THETA=0.0006;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 227029910 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.960;BRSQ=0.867;LDAF=0.1952;AVGPOST=0.9248;RSQ=0.8165;ERATE=0.0098;THETA=0.0003;AC=393;AN=2184 GT:DS:GL:BD 0.17994505 0
1 227029922 . TA T 1415 PASS INDEL;BAVGPOST=0.957;BRSQ=0.725;LDAF=0.0860;AVGPOST=0.9368;RSQ=0.7184;ERATE=0.0028;THETA=0.0007;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 227029923 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.956;BRSQ=0.737;LDAF=0.0995;AVGPOST=0.9343;RSQ=0.7315;ERATE=0.0062;THETA=0.0012;AC=190;AN=2184 GT:DS:GL:BD 0.08699634 0
1 227029925 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.884;BRSQ=0.780;LDAF=0.4904;AVGPOST=0.8153;RSQ=0.6936;ERATE=0.0675;THETA=0.0004;AC=1063;AN=2184 GT:DS:GL:BD 0.48672161 0
1 227029926 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.524;LDAF=0.0205;AVGPOST=0.9797;RSQ=0.6001;ERATE=0.0019;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 227029927 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.724;LDAF=0.0618;AVGPOST=0.9561;RSQ=0.7178;ERATE=0.0065;THETA=0.0003;AC=114;AN=2184 GT:DS:GL:BD 0.05219780 0
1 227030024 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0027;AVGPOST=0.9984;RSQ=0.7521;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227030261 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.9092;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227030276 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1536;AVGPOST=0.9936;RSQ=0.9815;ERATE=0.0007;THETA=0.0008;AC=336;AN=2184 GT:DS:GL:BD 0.15384616 0
1 227030430 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0189;AVGPOST=0.9997;RSQ=0.9917;ERATE=0.0003;THETA=0.0035;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 227030481 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5871;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227030484 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.966;LDAF=0.0644;AVGPOST=0.9970;RSQ=0.9797;ERATE=0.0004;THETA=0.0005;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 227030626 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0057;AVGPOST=0.9996;RSQ=0.9694;ERATE=0.0004;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227030702 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0193;AVGPOST=0.9987;RSQ=0.9699;ERATE=0.0004;THETA=0.0005;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 227030771 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.748;LDAF=0.0076;AVGPOST=0.9947;RSQ=0.7098;ERATE=0.0010;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227031010 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.774;LDAF=0.0023;AVGPOST=0.9994;RSQ=0.8841;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227031058 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0046;AVGPOST=0.9996;RSQ=0.9647;ERATE=0.0002;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227031111 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0187;AVGPOST=0.9998;RSQ=0.9944;ERATE=0.0002;THETA=0.0009;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 227031338 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0068;AVGPOST=0.9986;RSQ=0.9252;ERATE=0.0002;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 227031458 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0031;AVGPOST=0.9982;RSQ=0.7319;ERATE=0.0007;THETA=0.0028;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227031569 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0038;AVGPOST=0.9998;RSQ=0.9710;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227031639 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6796;ERATE=0.0003;THETA=0.0026;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227031732 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.908;LDAF=0.0751;AVGPOST=0.9895;RSQ=0.9387;ERATE=0.0011;THETA=0.0019;AC=161;AN=2184 GT:DS:GL:BD 0.07371795 0
1 227031832 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.871;LDAF=0.0124;AVGPOST=0.9961;RSQ=0.8731;ERATE=0.0003;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 227031844 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0947;AVGPOST=0.9982;RSQ=0.9913;ERATE=0.0003;THETA=0.0005;AC=208;AN=2184 GT:DS:GL:BD 0.09523810 0
1 227031852 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8720;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227031915 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0239;AVGPOST=0.9996;RSQ=0.9935;ERATE=0.0003;THETA=0.0004;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 227031946 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5425;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227032244 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9865;ERATE=0.0002;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227032306 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0066;AVGPOST=0.9995;RSQ=0.9680;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 227032528 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.957;LDAF=0.4843;AVGPOST=0.9630;RSQ=0.9451;ERATE=0.0059;THETA=0.0006;AC=1071;AN=2184 GT:DS:GL:BD 0.49038461 0
1 227032579 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.724;LDAF=0.0041;AVGPOST=0.9962;RSQ=0.6471;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227032671 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.4964;AVGPOST=0.9833;RSQ=0.9729;ERATE=0.0020;THETA=0.0004;AC=1096;AN=2184 GT:DS:GL:BD 0.50183153 1
1 227032804 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.766;LDAF=0.0231;AVGPOST=0.9941;RSQ=0.8938;ERATE=0.0009;THETA=0.0004;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 227032938 . CAGGA C 2150 PASS INDEL;BAVGPOST=0.990;BRSQ=0.854;LDAF=0.0476;AVGPOST=0.9715;RSQ=0.7776;ERATE=0.0036;THETA=0.0003;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 227032958 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5216;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227033133 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227033229 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0018;AVGPOST=0.9988;RSQ=0.7118;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227033243 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5604;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227033427 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5308;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227033447 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6963;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227033813 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2419;AVGPOST=0.9986;RSQ=0.9967;ERATE=0.0004;THETA=0.0004;AC=529;AN=2184 GT:DS:GL:BD 0.24221611 0
1 227033831 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.504;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.6270;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227033946 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1506;AVGPOST=0.9950;RSQ=0.9857;ERATE=0.0004;THETA=0.0003;AC=332;AN=2184 GT:DS:GL:BD 0.15201466 0
1 227033950 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.685;LDAF=0.0024;AVGPOST=0.9983;RSQ=0.7176;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227034011 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.946;LDAF=0.0459;AVGPOST=0.9957;RSQ=0.9595;ERATE=0.0011;THETA=0.0006;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 227034012 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.970;LDAF=0.0428;AVGPOST=0.9953;RSQ=0.9571;ERATE=0.0007;THETA=0.0005;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 227034159 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0127;AVGPOST=0.9999;RSQ=0.9949;ERATE=0.0002;THETA=0.0007;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 227034268 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227034447 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0243;AVGPOST=0.9997;RSQ=0.9951;ERATE=0.0003;THETA=0.0018;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 227034644 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0064;AVGPOST=0.9996;RSQ=0.9740;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 227034873 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6664;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227034984 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5587;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227035077 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.5006;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227035078 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227035105 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.902;LDAF=0.0220;AVGPOST=0.9974;RSQ=0.9536;ERATE=0.0004;THETA=0.0006;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 227035157 . C CAG 414 PASS INDEL;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9382;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227035188 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227035241 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0185;AVGPOST=0.9990;RSQ=0.9815;ERATE=0.0003;THETA=0.0003;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 227035280 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0056;AVGPOST=0.9988;RSQ=0.9134;ERATE=0.0003;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227035281 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0056;AVGPOST=0.9989;RSQ=0.9284;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227035388 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0037;AVGPOST=0.9986;RSQ=0.8470;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227035445 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9562;ERATE=0.0002;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227035558 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6612;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227035575 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9670;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227035583 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0028;AVGPOST=0.9984;RSQ=0.7691;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227035600 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227035713 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.928;LDAF=0.0057;AVGPOST=0.9982;RSQ=0.8849;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227035776 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0130;AVGPOST=0.9958;RSQ=0.8791;ERATE=0.0004;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 227035903 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5567;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227036016 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0914;AVGPOST=0.9952;RSQ=0.9753;ERATE=0.0006;THETA=0.0003;AC=198;AN=2184 GT:DS:GL:BD 0.09065934 0
1 227036034 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0052;AVGPOST=0.9997;RSQ=0.9763;ERATE=0.0002;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227036042 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.834;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.7199;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227036348 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.951;LDAF=0.0245;AVGPOST=0.9977;RSQ=0.9633;ERATE=0.0004;THETA=0.0003;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 227036353 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.552;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4461;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227036392 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0070;AVGPOST=0.9991;RSQ=0.9509;ERATE=0.0002;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 227036397 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.781;LDAF=0.0029;AVGPOST=0.9985;RSQ=0.8028;ERATE=0.0003;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227036401 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.978;LDAF=0.0292;AVGPOST=0.9969;RSQ=0.9537;ERATE=0.0003;THETA=0.0004;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 227036539 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.928;LDAF=0.0238;AVGPOST=0.9991;RSQ=0.9855;ERATE=0.0003;THETA=0.0005;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 227036556 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.978;LDAF=0.4895;AVGPOST=0.9611;RSQ=0.9425;ERATE=0.0056;THETA=0.0005;AC=1086;AN=2184 GT:DS:GL:BD 0.49725273 0
1 227036590 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.556;LDAF=0.0030;AVGPOST=0.9976;RSQ=0.6837;ERATE=0.0005;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227036607 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.608;LDAF=0.0023;AVGPOST=0.9980;RSQ=0.6042;ERATE=0.0006;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227036675 . C CA 1577 PASS INDEL;BAVGPOST=0.565;BRSQ=0.214;LDAF=0.5863;AVGPOST=0.7070;RSQ=0.5026;ERATE=0.0199;THETA=0.0004;AC=1322;AN=2184 GT:DS:GL:BD 0.60531133 1
1 227036682 . A AC 47 PASS INDEL;BAVGPOST=1.000;BRSQ=0.656;LDAF=0.0015;AVGPOST=0.9978;RSQ=0.3632;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227036685 . A AC 30 PASS INDEL;BAVGPOST=0.998;BRSQ=0.565;LDAF=0.0095;AVGPOST=0.9867;RSQ=0.4554;ERATE=0.0017;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227036689 rs71179180 A AC 4569 PASS INDEL;BAVGPOST=0.965;BRSQ=0.870;LDAF=0.1511;AVGPOST=0.9880;RSQ=0.9653;ERATE=0.0008;THETA=0.0008;AC=335;AN=2184 GT:DS:GL:BD 0.15338828 0
1 227036793 . AT A 45 PASS INDEL;BAVGPOST=0.999;BRSQ=0.693;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.6974;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227036913 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0191;AVGPOST=0.9993;RSQ=0.9827;ERATE=0.0003;THETA=0.0009;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 227036947 . AGTTTAATTTTAT A 1011 PASS INDEL;BAVGPOST=0.998;BRSQ=0.719;LDAF=0.0059;AVGPOST=0.9964;RSQ=0.7762;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227037008 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4839;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227037060 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.619;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7952;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227037171 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1539;AVGPOST=0.9989;RSQ=0.9967;ERATE=0.0003;THETA=0.0005;AC=337;AN=2184 GT:DS:GL:BD 0.15430403 0
1 227037213 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0078;AVGPOST=0.9995;RSQ=0.9699;ERATE=0.0002;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227037223 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1560;AVGPOST=0.9962;RSQ=0.9898;ERATE=0.0006;THETA=0.0003;AC=341;AN=2184 GT:DS:GL:BD 0.15613553 0
1 227037280 . CTAAT C 161 PASS INDEL;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0025;AVGPOST=0.9968;RSQ=0.4952;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227037456 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4902;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227037530 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4407;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227037651 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0022;AVGPOST=0.9977;RSQ=0.5552;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227037742 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1490;AVGPOST=0.9987;RSQ=0.9953;ERATE=0.0003;THETA=0.0004;AC=326;AN=2184 GT:DS:GL:BD 0.14926741 0
1 227037799 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.975;LDAF=0.0386;AVGPOST=0.9970;RSQ=0.9648;ERATE=0.0003;THETA=0.0005;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 227038013 . A ATTTTC 697 PASS INDEL;BAVGPOST=0.987;BRSQ=0.455;LDAF=0.0125;AVGPOST=0.9889;RSQ=0.6567;ERATE=0.0009;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 227038046 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.644;LDAF=0.0045;AVGPOST=0.9947;RSQ=0.5254;ERATE=0.0009;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227038056 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0157;AVGPOST=0.9980;RSQ=0.9468;ERATE=0.0003;THETA=0.0009;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 227038261 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0029;AVGPOST=0.9953;RSQ=0.3461;ERATE=0.0008;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227038333 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.949;LDAF=0.0089;AVGPOST=0.9977;RSQ=0.8974;ERATE=0.0004;THETA=0.0032;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 227038351 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0021;AVGPOST=0.9974;RSQ=0.5684;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227038381 . T TAA 16183 PASS INDEL;BAVGPOST=0.984;BRSQ=0.962;LDAF=0.2383;AVGPOST=0.9884;RSQ=0.9754;ERATE=0.0015;THETA=0.0004;AC=521;AN=2184 GT:DS:GL:BD 0.23855311 0
1 227038389 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.979;LDAF=0.2403;AVGPOST=0.9961;RSQ=0.9910;ERATE=0.0003;THETA=0.0003;AC=528;AN=2184 GT:DS:GL:BD 0.24175824 0
1 227038390 rs34145900 AG A 38 PASS INDEL;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0017;AVGPOST=0.9978;RSQ=0.5210;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227038413 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8702;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227038473 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0017;AVGPOST=0.9974;RSQ=0.3847;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227038485 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0027;AVGPOST=0.9977;RSQ=0.6675;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227038488 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1491;AVGPOST=0.9987;RSQ=0.9953;ERATE=0.0003;THETA=0.0001;AC=326;AN=2184 GT:DS:GL:BD 0.14926741 0
1 227038501 . A AT 385 PASS INDEL;BAVGPOST=0.999;BRSQ=0.903;LDAF=0.0058;AVGPOST=0.9967;RSQ=0.7575;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227038631 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227038754 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0210;AVGPOST=0.9989;RSQ=0.9795;ERATE=0.0003;THETA=0.0006;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 227038803 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227039016 rs35879176 GGCT G 18432 PASS INDEL;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1637;AVGPOST=0.9987;RSQ=0.9960;ERATE=0.0003;THETA=0.0002;AC=358;AN=2184 GT:DS:GL:BD 0.16391942 0
1 227039154 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9288;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227039219 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0064;AVGPOST=0.9989;RSQ=0.9292;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227039570 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0037;AVGPOST=0.9991;RSQ=0.9121;ERATE=0.0002;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227039946 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.818;LDAF=0.0070;AVGPOST=0.9984;RSQ=0.9077;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 227039996 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5301;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227040185 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0017;AVGPOST=0.9988;RSQ=0.7038;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227040254 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9321;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227040412 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0220;AVGPOST=0.9981;RSQ=0.9711;ERATE=0.0003;THETA=0.0007;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 227040583 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0015;AVGPOST=0.9983;RSQ=0.6073;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227040719 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8864;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227040724 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6347;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227040850 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5782;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227041074 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0032;AVGPOST=0.9994;RSQ=0.9171;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227041093 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.782;LDAF=0.0058;AVGPOST=0.9957;RSQ=0.6840;ERATE=0.0010;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227041200 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.851;LDAF=0.0399;AVGPOST=0.9963;RSQ=0.9610;ERATE=0.0005;THETA=0.0005;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 227041415 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.712;LDAF=0.0031;AVGPOST=0.9956;RSQ=0.4998;ERATE=0.0003;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227041556 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.849;LDAF=0.0181;AVGPOST=0.9968;RSQ=0.9288;ERATE=0.0007;THETA=0.0004;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 227041664 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.795;LDAF=0.0216;AVGPOST=0.9933;RSQ=0.8875;ERATE=0.0003;THETA=0.0005;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 227041770 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.772;LDAF=0.0064;AVGPOST=0.9962;RSQ=0.7686;ERATE=0.0007;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227041815 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0037;AVGPOST=0.9985;RSQ=0.8439;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227041837 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5724;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227041888 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.597;LDAF=0.0129;AVGPOST=0.9888;RSQ=0.6593;ERATE=0.0028;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 227041930 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.945;LDAF=0.1443;AVGPOST=0.9907;RSQ=0.9722;ERATE=0.0005;THETA=0.0008;AC=317;AN=2184 GT:DS:GL:BD 0.14514652 0
1 227042010 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0243;AVGPOST=0.9960;RSQ=0.9452;ERATE=0.0003;THETA=0.0005;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 227042079 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6151;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227042274 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8455;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227042333 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7580;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227042458 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0188;AVGPOST=0.9995;RSQ=0.9882;ERATE=0.0003;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 227042462 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4061;AVGPOST=0.9978;RSQ=0.9961;ERATE=0.0003;THETA=0.0005;AC=889;AN=2184 GT:DS:GL:BD 0.40705130 0
1 227042515 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.673;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227042524 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0398;AVGPOST=0.9984;RSQ=0.9855;ERATE=0.0003;THETA=0.0002;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 227042548 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5345;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227042566 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6134;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227042592 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0138;AVGPOST=0.9996;RSQ=0.9872;ERATE=0.0002;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 227042604 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0022;AVGPOST=0.9990;RSQ=0.7899;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227042607 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.577;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.6133;ERATE=0.0002;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227043145 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0213;AVGPOST=0.9993;RSQ=0.9868;ERATE=0.0003;THETA=0.0002;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 227043241 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6635;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227043309 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.684;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4347;ERATE=0.0008;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227043363 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1327;AVGPOST=0.9984;RSQ=0.9943;ERATE=0.0004;THETA=0.0005;AC=290;AN=2184 GT:DS:GL:BD 0.13278389 0
1 227043464 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9670;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227043662 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0016;AVGPOST=0.9976;RSQ=0.4579;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227043777 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5867;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227043904 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227043930 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0939;AVGPOST=0.9979;RSQ=0.9908;ERATE=0.0002;THETA=0.0003;AC=205;AN=2184 GT:DS:GL:BD 0.09386447 0
1 227043931 . AG A 8892 PASS INDEL;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0952;AVGPOST=0.9957;RSQ=0.9831;ERATE=0.0004;THETA=0.0003;AC=205;AN=2184 GT:DS:GL:BD 0.09386447 0
1 227043992 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227044042 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6217;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227044226 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0383;AVGPOST=0.9994;RSQ=0.9938;ERATE=0.0003;THETA=0.0004;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 227044256 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0076;AVGPOST=0.9994;RSQ=0.9735;ERATE=0.0002;THETA=0.0001;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 227044277 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8316;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227044402 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0023;AVGPOST=0.9982;RSQ=0.6759;ERATE=0.0006;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227044448 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0179;AVGPOST=0.9999;RSQ=0.9979;ERATE=0.0002;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 227044551 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.766;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8266;ERATE=0.0002;THETA=0.0034;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227044587 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0261;AVGPOST=0.9997;RSQ=0.9946;ERATE=0.0003;THETA=0.0002;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 227044668 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0166;AVGPOST=0.9998;RSQ=0.9936;ERATE=0.0003;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 227044692 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0388;AVGPOST=0.9991;RSQ=0.9907;ERATE=0.0003;THETA=0.0004;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 227044741 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227044877 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0028;AVGPOST=0.9987;RSQ=0.7956;ERATE=0.0005;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227045029 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5018;AVGPOST=0.9985;RSQ=0.9980;ERATE=0.0003;THETA=0.0003;AC=1097;AN=2184 GT:DS:GL:BD 0.50228935 1
1 227045224 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0042;AVGPOST=0.9989;RSQ=0.9002;ERATE=0.0002;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227045262 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0022;AVGPOST=0.9978;RSQ=0.6316;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227045462 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.629;LDAF=0.0018;AVGPOST=0.9986;RSQ=0.6809;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227045486 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.540;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4454;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227045568 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.836;LDAF=0.0134;AVGPOST=0.9960;RSQ=0.8893;ERATE=0.0004;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 227045583 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8625;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227045614 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7189;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227045685 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.895;LDAF=0.0199;AVGPOST=0.9989;RSQ=0.9726;ERATE=0.0003;THETA=0.0003;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 227045809 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.896;LDAF=0.0205;AVGPOST=0.9963;RSQ=0.9331;ERATE=0.0007;THETA=0.0003;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 227045985 . G GT 10754 PASS INDEL;BAVGPOST=0.981;BRSQ=0.968;LDAF=0.5013;AVGPOST=0.9883;RSQ=0.9832;ERATE=0.0009;THETA=0.0003;AC=1093;AN=2184 GT:DS:GL:BD 0.50045788 1
1 227045988 rs35538885 T TA 48002 PASS INDEL;BAVGPOST=0.981;BRSQ=0.969;LDAF=0.5003;AVGPOST=0.9931;RSQ=0.9898;ERATE=0.0004;THETA=0.0028;AC=1094;AN=2184 GT:DS:GL:BD 0.50091577 1
1 227046093 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0270;AVGPOST=0.9989;RSQ=0.9848;ERATE=0.0003;THETA=0.0008;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 227046133 rs72423622 C CTAT 8981 PASS INDEL;BAVGPOST=0.975;BRSQ=0.923;LDAF=0.1523;AVGPOST=0.9899;RSQ=0.9698;ERATE=0.0005;THETA=0.0004;AC=336;AN=2184 GT:DS:GL:BD 0.15384616 0
1 227046141 . T TA 830 PASS INDEL;BAVGPOST=0.949;BRSQ=0.763;LDAF=0.1206;AVGPOST=0.9744;RSQ=0.9071;ERATE=0.0006;THETA=0.0030;AC=267;AN=2184 GT:DS:GL:BD 0.12225275 0
1 227046149 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227046173 . T TTTG 127 PASS INDEL;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0056;AVGPOST=0.9938;RSQ=0.6026;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227046266 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.765;LDAF=0.0027;AVGPOST=0.9973;RSQ=0.6234;ERATE=0.0006;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227046412 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.794;LDAF=0.0099;AVGPOST=0.9895;RSQ=0.5933;ERATE=0.0009;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 227046453 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9251;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227046474 . C CTT 129 PASS INDEL;BAVGPOST=0.901;BRSQ=0.187;LDAF=0.1026;AVGPOST=0.8998;RSQ=0.6096;ERATE=0.0042;THETA=0.0004;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 227046517 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9986;RSQ=0.9030;ERATE=0.0004;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227046533 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0085;AVGPOST=0.9994;RSQ=0.9669;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 227046541 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.712;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7282;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227046594 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.708;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4245;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227046724 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.756;LDAF=0.0021;AVGPOST=0.9968;RSQ=0.3741;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227046872 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.845;LDAF=0.0031;AVGPOST=0.9983;RSQ=0.7677;ERATE=0.0008;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227047008 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6633;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227047217 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.734;LDAF=0.0021;AVGPOST=0.9975;RSQ=0.5405;ERATE=0.0005;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227047230 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5835;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227047249 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.5027;AVGPOST=0.9964;RSQ=0.9951;ERATE=0.0002;THETA=0.0003;AC=1099;AN=2184 GT:DS:GL:BD 0.50320512 1
1 227047256 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1548;AVGPOST=0.9984;RSQ=0.9958;ERATE=0.0003;THETA=0.0003;AC=338;AN=2184 GT:DS:GL:BD 0.15476191 0
1 227047346 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8096;ERATE=0.0002;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227047420 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0405;AVGPOST=0.9985;RSQ=0.9880;ERATE=0.0002;THETA=0.0003;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 227047451 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1536;AVGPOST=0.9994;RSQ=0.9981;ERATE=0.0003;THETA=0.0005;AC=336;AN=2184 GT:DS:GL:BD 0.15384616 0
1 227047547 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0785;AVGPOST=0.9970;RSQ=0.9838;ERATE=0.0006;THETA=0.0005;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 227047552 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.812;LDAF=0.0061;AVGPOST=0.9982;RSQ=0.8726;ERATE=0.0002;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227047587 . TA T 1827 PASS INDEL;BAVGPOST=0.935;BRSQ=0.726;LDAF=0.1195;AVGPOST=0.9580;RSQ=0.8604;ERATE=0.0026;THETA=0.0004;AC=254;AN=2184 GT:DS:GL:BD 0.11630037 0
1 227047588 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.960;LDAF=0.1584;AVGPOST=0.9668;RSQ=0.9101;ERATE=0.0044;THETA=0.0003;AC=334;AN=2184 GT:DS:GL:BD 0.15293041 0
1 227047591 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.768;LDAF=0.0027;AVGPOST=0.9971;RSQ=0.5652;ERATE=0.0008;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227047593 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.727;LDAF=0.0105;AVGPOST=0.9896;RSQ=0.5995;ERATE=0.0026;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 227047597 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.688;LDAF=0.0023;AVGPOST=0.9972;RSQ=0.4937;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227047603 . A AT 104 PASS INDEL;BAVGPOST=0.968;BRSQ=0.417;LDAF=0.0744;AVGPOST=0.8972;RSQ=0.4053;ERATE=0.0125;THETA=0.0004;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 227047608 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.777;LDAF=0.0079;AVGPOST=0.9955;RSQ=0.7542;ERATE=0.0010;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227047636 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0221;AVGPOST=0.9958;RSQ=0.9218;ERATE=0.0006;THETA=0.0003;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 227047696 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.857;LDAF=0.0220;AVGPOST=0.9929;RSQ=0.8565;ERATE=0.0007;THETA=0.0010;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 227047940 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227048016 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.806;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8019;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227048031 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7891;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227048388 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227048493 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.754;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7125;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227048537 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227048594 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0061;AVGPOST=0.9997;RSQ=0.9763;ERATE=0.0002;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227048754 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0053;AVGPOST=0.9994;RSQ=0.9581;ERATE=0.0002;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227048758 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.982;LDAF=0.4928;AVGPOST=0.9914;RSQ=0.9868;ERATE=0.0004;THETA=0.0002;AC=1083;AN=2184 GT:DS:GL:BD 0.49587911 0
1 227048759 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.975;LDAF=0.2553;AVGPOST=0.9919;RSQ=0.9839;ERATE=0.0004;THETA=0.0007;AC=563;AN=2184 GT:DS:GL:BD 0.25778389 0
1 227048875 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0060;AVGPOST=0.9991;RSQ=0.9440;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227049122 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0398;AVGPOST=0.9999;RSQ=0.9989;ERATE=0.0002;THETA=0.0003;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 227049148 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0013;AVGPOST=0.9994;RSQ=0.8831;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227049436 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.7736;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227049491 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0020;AVGPOST=0.9991;RSQ=0.8121;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227049521 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8475;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227049668 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.825;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9133;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227049680 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.790;LDAF=0.0126;AVGPOST=0.9935;RSQ=0.7863;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 227049709 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8474;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227049822 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6423;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227049954 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4988;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227049993 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0399;AVGPOST=0.9996;RSQ=0.9957;ERATE=0.0003;THETA=0.0004;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 227050039 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0179;AVGPOST=0.9999;RSQ=0.9979;ERATE=0.0002;THETA=0.0005;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 227050056 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.7298;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227050079 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0212;AVGPOST=0.9995;RSQ=0.9931;ERATE=0.0003;THETA=0.0002;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 227050341 . ATG A 159 PASS INDEL;BAVGPOST=0.998;BRSQ=0.950;LDAF=0.0162;AVGPOST=0.9971;RSQ=0.9429;ERATE=0.0003;THETA=0.0002;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 227050342 rs66785151 TGTG T 3744 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0146;AVGPOST=0.9984;RSQ=0.9626;ERATE=0.0003;THETA=0.0006;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 227050376 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.739;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7425;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227050545 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6633;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227050588 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7905;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227050599 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8497;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227050852 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0186;AVGPOST=0.9988;RSQ=0.9801;ERATE=0.0003;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 227050928 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0046;AVGPOST=0.9988;RSQ=0.8794;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227050930 . TGAGAA T 229 PASS INDEL;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9244;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227051168 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0941;AVGPOST=0.9991;RSQ=0.9959;ERATE=0.0002;THETA=0.0004;AC=206;AN=2184 GT:DS:GL:BD 0.09432235 0
1 227051257 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0015;AVGPOST=0.9982;RSQ=0.5533;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227051258 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.613;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4853;ERATE=0.0009;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227051261 rs57465738 G GC 4817 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0399;AVGPOST=0.9997;RSQ=0.9968;ERATE=0.0003;THETA=0.0007;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 227051281 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5466;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227051363 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0399;AVGPOST=0.9998;RSQ=0.9978;ERATE=0.0003;THETA=0.0005;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 227051448 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0081;AVGPOST=0.9984;RSQ=0.9259;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227051518 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7857;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227051645 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227051681 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0052;AVGPOST=0.9979;RSQ=0.8667;ERATE=0.0002;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227051686 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9196;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227051749 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227051761 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7163;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227051894 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0030;AVGPOST=0.9986;RSQ=0.8191;ERATE=0.0006;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227051948 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.914;LDAF=0.0197;AVGPOST=0.9965;RSQ=0.9378;ERATE=0.0004;THETA=0.0002;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 227052135 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0187;AVGPOST=0.9998;RSQ=0.9947;ERATE=0.0002;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 227052192 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0018;AVGPOST=1.0000;RSQ=0.9879;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227052332 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0130;AVGPOST=0.9995;RSQ=0.9827;ERATE=0.0003;THETA=0.0002;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 227052378 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0947;AVGPOST=0.9980;RSQ=0.9907;ERATE=0.0005;THETA=0.0006;AC=206;AN=2184 GT:DS:GL:BD 0.09432235 0
1 227052423 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.716;LDAF=0.0095;AVGPOST=0.9897;RSQ=0.5890;ERATE=0.0024;THETA=0.0010;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 227052747 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8061;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227052760 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.6867;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227052767 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0400;AVGPOST=0.9994;RSQ=0.9931;ERATE=0.0003;THETA=0.0004;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 227052786 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227052801 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2644;AVGPOST=0.9984;RSQ=0.9965;ERATE=0.0003;THETA=0.0003;AC=578;AN=2184 GT:DS:GL:BD 0.26465201 0
1 227053078 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5617;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227053120 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9344;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227053206 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0060;AVGPOST=0.9973;RSQ=0.8654;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227053239 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7495;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227053256 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227053294 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0038;AVGPOST=0.9995;RSQ=0.9358;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227053398 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9131;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227053448 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0020;AVGPOST=0.9975;RSQ=0.5597;ERATE=0.0004;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227053533 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.677;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6208;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227053699 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5836;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227053868 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.977;LDAF=0.1073;AVGPOST=0.9900;RSQ=0.9604;ERATE=0.0035;THETA=0.0003;AC=232;AN=2184 GT:DS:GL:BD 0.10622711 0
1 227054008 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.604;LDAF=0.0274;AVGPOST=0.9738;RSQ=0.6082;ERATE=0.0027;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 227054012 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.933;BRSQ=0.877;LDAF=0.4602;AVGPOST=0.9108;RSQ=0.8590;ERATE=0.0134;THETA=0.0005;AC=1025;AN=2184 GT:DS:GL:BD 0.46932235 0
1 227054024 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.623;LDAF=0.0227;AVGPOST=0.9758;RSQ=0.5810;ERATE=0.0039;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 227054200 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1585;AVGPOST=0.9983;RSQ=0.9943;ERATE=0.0005;THETA=0.0004;AC=347;AN=2184 GT:DS:GL:BD 0.15888278 0
1 227054218 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0018;AVGPOST=0.9988;RSQ=0.7908;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227054467 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9734;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227054474 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227054559 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0023;AVGPOST=0.9982;RSQ=0.7087;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227054806 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0108;AVGPOST=0.9993;RSQ=0.9755;ERATE=0.0002;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 227054872 MERGED_DEL_2_7513 A <DEL> . . SV;BAVGPOST=0.998;BRSQ=0.389;LDAF=0.0018;AVGPOST=0.9974;RSQ=0.4272;ERATE=0.0009;THETA=0.0005;CIEND=-17,33;CIPOS=-18,19;END=227056197;SOURCE=GenomeStrip_227054872_227056197;SVTYPE=DEL;AC=1;AN GT:DS:GL:BD 0.00045788 0
1 227054879 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7662;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227054890 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.775;LDAF=0.0029;AVGPOST=0.9958;RSQ=0.4702;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227054958 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.656;LDAF=0.0041;AVGPOST=0.9942;RSQ=0.4928;ERATE=0.0006;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227055042 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0181;AVGPOST=0.9960;RSQ=0.9150;ERATE=0.0004;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 227055045 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.763;LDAF=0.0184;AVGPOST=0.9940;RSQ=0.8661;ERATE=0.0006;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 227055099 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.863;LDAF=0.0144;AVGPOST=0.9947;RSQ=0.8449;ERATE=0.0010;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 227055100 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.917;LDAF=0.0153;AVGPOST=0.9950;RSQ=0.8758;ERATE=0.0009;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 227055100 . A AC 240 PASS INDEL;BAVGPOST=0.996;BRSQ=0.882;LDAF=0.0109;AVGPOST=0.9963;RSQ=0.8945;ERATE=0.0004;THETA=0.0021;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 227055102 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0181;AVGPOST=0.9994;RSQ=0.9873;ERATE=0.0002;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 227055138 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.806;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.6777;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227055144 . G GA 153 PASS INDEL;BAVGPOST=0.986;BRSQ=0.576;LDAF=0.0292;AVGPOST=0.9658;RSQ=0.5411;ERATE=0.0066;THETA=0.0006;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 227055457 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.6713;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227055484 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0055;AVGPOST=0.9998;RSQ=0.9841;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227055509 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0099;AVGPOST=0.9976;RSQ=0.9138;ERATE=0.0003;THETA=0.0008;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 227055547 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.8374;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227055561 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6564;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227055564 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0021;AVGPOST=0.9991;RSQ=0.8098;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227055590 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0035;AVGPOST=0.9979;RSQ=0.7834;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227055844 . AAAC A 2258 PASS INDEL;BAVGPOST=0.996;BRSQ=0.936;LDAF=0.0273;AVGPOST=0.9902;RSQ=0.8619;ERATE=0.0019;THETA=0.0004;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 227055902 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0036;AVGPOST=0.9985;RSQ=0.8652;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227055924 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9799;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227056032 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.5409;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227056091 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1551;AVGPOST=0.9978;RSQ=0.9935;ERATE=0.0004;THETA=0.0006;AC=338;AN=2184 GT:DS:GL:BD 0.15476191 0
1 227056222 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.917;LDAF=0.0482;AVGPOST=0.9948;RSQ=0.9568;ERATE=0.0004;THETA=0.0004;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 227056324 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0051;AVGPOST=1.0000;RSQ=0.9957;ERATE=0.0002;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227056406 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6788;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227056476 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0049;AVGPOST=0.9993;RSQ=0.9434;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227056528 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.486;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7897;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227056808 . GTA G 120 PASS INDEL;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0004;AVGPOST=0.9996;RSQ=0.6023;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227056986 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.980;LDAF=0.0400;AVGPOST=0.9994;RSQ=0.9930;ERATE=0.0004;THETA=0.0004;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 227057117 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0192;AVGPOST=0.9987;RSQ=0.9747;ERATE=0.0003;THETA=0.0002;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 227057122 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.753;LDAF=0.0030;AVGPOST=0.9964;RSQ=0.5019;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227057123 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0400;AVGPOST=0.9993;RSQ=0.9915;ERATE=0.0004;THETA=0.0005;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 227057247 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9670;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227057250 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0024;AVGPOST=0.9974;RSQ=0.6056;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227057263 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0399;AVGPOST=0.9998;RSQ=0.9973;ERATE=0.0003;THETA=0.0006;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 227057369 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.634;LDAF=0.0021;AVGPOST=0.9975;RSQ=0.5157;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227057455 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7566;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227057466 rs77868244 TA T 19526 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1532;AVGPOST=0.9985;RSQ=0.9955;ERATE=0.0003;THETA=0.0003;AC=336;AN=2184 GT:DS:GL:BD 0.15384616 0
1 227057569 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8448;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227057624 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0034;AVGPOST=0.9993;RSQ=0.9061;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227057758 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5817;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227057787 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7215;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227057815 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.929;LDAF=0.0074;AVGPOST=0.9988;RSQ=0.9464;ERATE=0.0002;THETA=0.0023;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 227057837 . C CA 991 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0062;AVGPOST=0.9980;RSQ=0.8758;ERATE=0.0005;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227058002 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227058046 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.979;LDAF=0.0373;AVGPOST=0.9987;RSQ=0.9847;ERATE=0.0004;THETA=0.0005;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 227058115 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0147;AVGPOST=0.9963;RSQ=0.9151;ERATE=0.0004;THETA=0.0002;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 227058157 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.447;LDAF=0.0133;AVGPOST=0.9861;RSQ=0.5771;ERATE=0.0013;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 227058300 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.956;BRSQ=0.167;LDAF=0.0753;AVGPOST=0.8875;RSQ=0.3844;ERATE=0.0065;THETA=0.0005;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 227058344 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.919;BRSQ=0.845;LDAF=0.4996;AVGPOST=0.8929;RSQ=0.8361;ERATE=0.0077;THETA=0.0025;AC=1075;AN=2184 GT:DS:GL:BD 0.49221611 0
1 227058440 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.942;BRSQ=0.789;LDAF=0.1944;AVGPOST=0.8892;RSQ=0.7244;ERATE=0.0084;THETA=0.0005;AC=368;AN=2184 GT:DS:GL:BD 0.16849817 0
1 227058813 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0395;AVGPOST=0.9974;RSQ=0.9727;ERATE=0.0007;THETA=0.0002;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 227058826 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0162;AVGPOST=0.9974;RSQ=0.9448;ERATE=0.0004;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 227058974 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0153;AVGPOST=0.9996;RSQ=0.9885;ERATE=0.0003;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 227059015 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9144;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227059037 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1552;AVGPOST=0.9987;RSQ=0.9960;ERATE=0.0003;THETA=0.0004;AC=339;AN=2184 GT:DS:GL:BD 0.15521978 0
1 227059070 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5437;ERATE=0.0003;THETA=0.0069;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227059110 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5790;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227059281 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227059324 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0037;AVGPOST=0.9973;RSQ=0.7066;ERATE=0.0006;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227059403 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0132;AVGPOST=0.9990;RSQ=0.9645;ERATE=0.0003;THETA=0.0006;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 227059478 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.8019;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227059484 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6309;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227059606 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.990;LDAF=0.5197;AVGPOST=0.9931;RSQ=0.9898;ERATE=0.0007;THETA=0.0017;AC=1137;AN=2184 GT:DS:GL:BD 0.52060437 1
1 227059735 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7150;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227059739 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2532;AVGPOST=0.9984;RSQ=0.9970;ERATE=0.0003;THETA=0.0006;AC=555;AN=2184 GT:DS:GL:BD 0.25412089 0
1 227059783 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0403;AVGPOST=0.9997;RSQ=0.9969;ERATE=0.0003;THETA=0.0005;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 227059784 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7588;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227059847 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7921;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227059882 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0035;AVGPOST=0.9985;RSQ=0.8523;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227059895 . C CGGTG 879 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0040;AVGPOST=0.9990;RSQ=0.8837;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227059930 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.756;LDAF=0.0031;AVGPOST=0.9989;RSQ=0.8631;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227059961 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8474;ERATE=0.0003;THETA=0.0066;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227060030 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.921;LDAF=0.0063;AVGPOST=0.9985;RSQ=0.9199;ERATE=0.0002;THETA=0.0019;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227060075 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227060258 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227060342 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.2552;AVGPOST=0.9976;RSQ=0.9954;ERATE=0.0004;THETA=0.0012;AC=559;AN=2184 GT:DS:GL:BD 0.25595239 0
1 227060431 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9229;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227060490 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0902;AVGPOST=0.9986;RSQ=0.9941;ERATE=0.0004;THETA=0.0003;AC=196;AN=2184 GT:DS:GL:BD 0.08974359 0
1 227060543 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6112;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227060621 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.691;LDAF=0.0034;AVGPOST=0.9968;RSQ=0.6932;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227060676 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.963;BRSQ=0.933;LDAF=0.5012;AVGPOST=0.9373;RSQ=0.9075;ERATE=0.0148;THETA=0.0004;AC=1109;AN=2184 GT:DS:GL:BD 0.50778389 1
1 227060997 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6151;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227061077 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6814;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227061126 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0199;AVGPOST=0.9980;RSQ=0.9564;ERATE=0.0004;THETA=0.0002;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 227061243 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.611;LDAF=0.0407;AVGPOST=0.9593;RSQ=0.5974;ERATE=0.0083;THETA=0.0004;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 227061305 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1598;AVGPOST=0.9975;RSQ=0.9931;ERATE=0.0006;THETA=0.0002;AC=348;AN=2184 GT:DS:GL:BD 0.15934066 0
1 227061422 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0365;AVGPOST=0.9983;RSQ=0.9799;ERATE=0.0003;THETA=0.0003;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 227061485 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1550;AVGPOST=0.9986;RSQ=0.9965;ERATE=0.0003;THETA=0.0003;AC=339;AN=2184 GT:DS:GL:BD 0.15521978 0
1 227061559 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6066;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227061589 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0905;AVGPOST=0.9997;RSQ=0.9984;ERATE=0.0003;THETA=0.0004;AC=198;AN=2184 GT:DS:GL:BD 0.09065934 0
1 227061655 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2558;AVGPOST=0.9990;RSQ=0.9979;ERATE=0.0003;THETA=0.0004;AC=559;AN=2184 GT:DS:GL:BD 0.25595239 0
1 227061712 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0815;AVGPOST=0.9996;RSQ=0.9975;ERATE=0.0003;THETA=0.0001;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 227061763 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0407;AVGPOST=0.9999;RSQ=0.9984;ERATE=0.0003;THETA=0.0003;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 227061846 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0040;AVGPOST=0.9995;RSQ=0.9519;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227061947 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0667;AVGPOST=0.9988;RSQ=0.9922;ERATE=0.0003;THETA=0.0002;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 227062050 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0329;AVGPOST=0.9991;RSQ=0.9914;ERATE=0.0002;THETA=0.0002;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 227062129 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5180;AVGPOST=0.9994;RSQ=0.9989;ERATE=0.0003;THETA=0.0004;AC=1133;AN=2184 GT:DS:GL:BD 0.51877290 1
1 227062137 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0033;AVGPOST=0.9988;RSQ=0.8371;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227062157 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0907;AVGPOST=0.9997;RSQ=0.9984;ERATE=0.0002;THETA=0.0004;AC=198;AN=2184 GT:DS:GL:BD 0.09065934 0
1 227062163 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227062201 . TGCCTGGG T 221 PASS INDEL;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0023;AVGPOST=0.9975;RSQ=0.6109;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227062217 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8037;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227062328 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0912;AVGPOST=0.9984;RSQ=0.9933;ERATE=0.0005;THETA=0.0004;AC=198;AN=2184 GT:DS:GL:BD 0.09065934 0
1 227062389 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0905;AVGPOST=0.9998;RSQ=0.9991;ERATE=0.0003;THETA=0.0003;AC=198;AN=2184 GT:DS:GL:BD 0.09065934 0
1 227062428 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.929;LDAF=0.0085;AVGPOST=0.9982;RSQ=0.9198;ERATE=0.0003;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227062485 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0905;AVGPOST=0.9999;RSQ=0.9995;ERATE=0.0002;THETA=0.0004;AC=198;AN=2184 GT:DS:GL:BD 0.09065934 0
1 227062588 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0046;AVGPOST=0.9981;RSQ=0.8362;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227062602 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.971;LDAF=0.0459;AVGPOST=0.9954;RSQ=0.9632;ERATE=0.0002;THETA=0.0003;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 227062606 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1316;AVGPOST=0.9986;RSQ=0.9951;ERATE=0.0003;THETA=0.0002;AC=288;AN=2184 GT:DS:GL:BD 0.13186814 0
1 227062626 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.637;LDAF=0.0018;AVGPOST=0.9974;RSQ=0.4754;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227062648 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8237;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227062802 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0187;AVGPOST=0.9984;RSQ=0.9669;ERATE=0.0005;THETA=0.0002;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 227062831 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2555;AVGPOST=0.9987;RSQ=0.9972;ERATE=0.0004;THETA=0.0002;AC=559;AN=2184 GT:DS:GL:BD 0.25595239 0
1 227063009 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0130;AVGPOST=0.9997;RSQ=0.9891;ERATE=0.0002;THETA=0.0002;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 227063088 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0018;AVGPOST=0.9981;RSQ=0.5703;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227063229 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0899;AVGPOST=0.9984;RSQ=0.9946;ERATE=0.0003;THETA=0.0002;AC=197;AN=2184 GT:DS:GL:BD 0.09020147 0
1 227063365 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.889;LDAF=0.0039;AVGPOST=0.9978;RSQ=0.7725;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227063400 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2571;AVGPOST=0.9981;RSQ=0.9961;ERATE=0.0005;THETA=0.0003;AC=561;AN=2184 GT:DS:GL:BD 0.25686812 0
1 227063487 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.726;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8674;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227063671 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.995;LDAF=0.5980;AVGPOST=0.9960;RSQ=0.9932;ERATE=0.0007;THETA=0.0007;AC=1308;AN=2184 GT:DS:GL:BD 0.59890109 1
1 227063732 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0213;AVGPOST=0.9974;RSQ=0.9480;ERATE=0.0005;THETA=0.0006;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 227063735 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0065;AVGPOST=0.9994;RSQ=0.9607;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 227063873 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9375;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227063951 . AC A 1086 PASS INDEL;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0081;AVGPOST=0.9984;RSQ=0.9298;ERATE=0.0004;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 227064049 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0022;AVGPOST=0.9982;RSQ=0.6619;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227064184 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0055;AVGPOST=0.9998;RSQ=0.9805;ERATE=0.0002;THETA=0.0013;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227064213 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0028;AVGPOST=0.9954;RSQ=0.4616;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227064261 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.0905;AVGPOST=0.9997;RSQ=0.9984;ERATE=0.0003;THETA=0.0003;AC=198;AN=2184 GT:DS:GL:BD 0.09065934 0
1 227064307 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0910;AVGPOST=0.9989;RSQ=0.9969;ERATE=0.0002;THETA=0.0003;AC=198;AN=2184 GT:DS:GL:BD 0.09065934 0
1 227064380 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6837;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227064395 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5946;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227064495 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8726;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227064594 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5080;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227064600 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8406;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227064603 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6553;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227064610 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0035;AVGPOST=0.9992;RSQ=0.9243;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227064627 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0152;AVGPOST=0.9999;RSQ=0.9961;ERATE=0.0002;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 227064720 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0407;AVGPOST=1.0000;RSQ=0.9995;ERATE=0.0002;THETA=0.0003;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 227064762 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6386;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227064805 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.783;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9260;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227064868 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227064877 . GA G 711 PASS INDEL;BAVGPOST=0.949;BRSQ=0.531;LDAF=0.0532;AVGPOST=0.9770;RSQ=0.8317;ERATE=0.0014;THETA=0.0003;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 227064881 . AG A 6610 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0352;AVGPOST=0.9957;RSQ=0.9593;ERATE=0.0003;THETA=0.0004;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 227064973 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0904;AVGPOST=0.9989;RSQ=0.9951;ERATE=0.0004;THETA=0.0005;AC=198;AN=2184 GT:DS:GL:BD 0.09065934 0
1 227065039 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227065123 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9764;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227065140 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8664;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227065266 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.907;LDAF=0.0190;AVGPOST=0.9977;RSQ=0.9513;ERATE=0.0003;THETA=0.0002;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 227065374 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0029;AVGPOST=0.9998;RSQ=0.9618;ERATE=0.0003;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227065478 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1318;AVGPOST=0.9989;RSQ=0.9960;ERATE=0.0003;THETA=0.0003;AC=288;AN=2184 GT:DS:GL:BD 0.13186814 0
1 227065612 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7497;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227065623 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5670;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227065648 . CT C 52 PASS INDEL;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0024;AVGPOST=0.9960;RSQ=0.3337;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227065707 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.780;LDAF=0.0043;AVGPOST=0.9971;RSQ=0.7462;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227065748 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227065763 . C CT 150 PASS INDEL;BAVGPOST=0.997;BRSQ=0.643;LDAF=0.0064;AVGPOST=0.9911;RSQ=0.4868;ERATE=0.0014;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227065854 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.0809;AVGPOST=0.9977;RSQ=0.9866;ERATE=0.0003;THETA=0.0007;AC=176;AN=2184 GT:DS:GL:BD 0.08058608 0
1 227065942 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.815;LDAF=0.0077;AVGPOST=0.9983;RSQ=0.9100;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 227066029 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.746;LDAF=0.0027;AVGPOST=0.9966;RSQ=0.5067;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227066141 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0065;AVGPOST=0.9976;RSQ=0.8777;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 227066210 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9244;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227066354 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.0038;AVGPOST=0.9987;RSQ=0.8660;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227066376 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5809;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227066431 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.898;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7928;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227066437 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=1.0000;RSQ=0.9941;ERATE=0.0002;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227066582 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0167;AVGPOST=0.9994;RSQ=0.9838;ERATE=0.0003;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 227066605 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9734;ERATE=0.0002;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227066873 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.736;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6976;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227066896 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.968;LDAF=0.0287;AVGPOST=0.9986;RSQ=0.9812;ERATE=0.0004;THETA=0.0003;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 227067272 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8938;ERATE=0.0002;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227067342 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0062;AVGPOST=0.9993;RSQ=0.9516;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 227067397 . TCTTA T 304 PASS INDEL;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227067459 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0418;AVGPOST=0.9997;RSQ=0.9969;ERATE=0.0002;THETA=0.0003;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 227067612 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227067656 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.987;LDAF=0.0862;AVGPOST=0.9963;RSQ=0.9838;ERATE=0.0002;THETA=0.0002;AC=188;AN=2184 GT:DS:GL:BD 0.08608059 0
1 227067743 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7169;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227067828 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7063;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227067914 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0507;AVGPOST=0.9995;RSQ=0.9956;ERATE=0.0003;THETA=0.0005;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 227068049 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0911;AVGPOST=0.9984;RSQ=0.9931;ERATE=0.0003;THETA=0.0003;AC=198;AN=2184 GT:DS:GL:BD 0.09065934 0
1 227068051 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6160;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227068138 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6203;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227068181 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227068220 . G GGACA 10 PASS INDEL;BAVGPOST=0.999;BRSQ=0.750;LDAF=0.0028;AVGPOST=0.9962;RSQ=0.4493;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227068227 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0197;AVGPOST=0.9990;RSQ=0.9751;ERATE=0.0004;THETA=0.0002;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 227068268 . G GGACA 1448 PASS INDEL;BAVGPOST=0.989;BRSQ=0.684;LDAF=0.0274;AVGPOST=0.9798;RSQ=0.7339;ERATE=0.0027;THETA=0.0003;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 227068290 . G GGACA 54 PASS INDEL;BAVGPOST=0.998;BRSQ=0.511;LDAF=0.0035;AVGPOST=0.9949;RSQ=0.4526;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227068398 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0905;AVGPOST=0.9999;RSQ=0.9993;ERATE=0.0003;THETA=0.0003;AC=198;AN=2184 GT:DS:GL:BD 0.09065934 0
1 227068472 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0499;AVGPOST=0.9999;RSQ=0.9992;ERATE=0.0002;THETA=0.0005;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 227068504 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7440;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227068563 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7495;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227068870 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0181;AVGPOST=0.9995;RSQ=0.9928;ERATE=0.0003;THETA=0.0003;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 227069110 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9549;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227069245 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0152;AVGPOST=0.9997;RSQ=0.9912;ERATE=0.0002;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 227069267 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4820;AVGPOST=0.9988;RSQ=0.9979;ERATE=0.0003;THETA=0.0003;AC=1051;AN=2184 GT:DS:GL:BD 0.48122710 0
1 227069337 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227069357 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9999;RSQ=0.9881;ERATE=0.0002;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227069367 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8520;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227069373 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9149;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227069473 . C CT 78 PASS INDEL;BAVGPOST=1.000;BRSQ=0.761;LDAF=0.0044;AVGPOST=0.9951;RSQ=0.5687;ERATE=0.0006;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227069550 . C CAGGAAAGTGG 234 PASS INDEL;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0022;AVGPOST=0.9990;RSQ=0.7940;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227069677 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7444;AVGPOST=0.9997;RSQ=0.9993;ERATE=0.0003;THETA=0.0002;AC=1625;AN=2184 GT:DS:GL:BD 0.74404764 1
1 227069708 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9571;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227069737 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4822;AVGPOST=0.9999;RSQ=0.9998;ERATE=0.0003;THETA=0.0006;AC=1051;AN=2184 GT:DS:GL:BD 0.48122710 0
1 227069740 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227069779 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0128;AVGPOST=0.9999;RSQ=0.9968;ERATE=0.0002;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 227069807 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9999;RSQ=0.9940;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 227069874 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0499;AVGPOST=0.9998;RSQ=0.9984;ERATE=0.0003;THETA=0.0003;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 227069917 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227069939 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.8291;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227070096 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0033;AVGPOST=0.9996;RSQ=0.9440;ERATE=0.0002;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227070118 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0151;AVGPOST=0.9987;RSQ=0.9680;ERATE=0.0004;THETA=0.0006;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 227070125 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7588;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227070147 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6447;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227070203 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0153;AVGPOST=0.9991;RSQ=0.9808;ERATE=0.0002;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 227070248 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7682;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227070252 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.892;LDAF=0.0096;AVGPOST=0.9982;RSQ=0.9270;ERATE=0.0002;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 227070315 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7955;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227070378 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.4820;AVGPOST=0.9994;RSQ=0.9989;ERATE=0.0004;THETA=0.0002;AC=1051;AN=2184 GT:DS:GL:BD 0.48122710 0
1 227070533 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9503;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227070554 . G GT 16 PASS INDEL;BAVGPOST=0.999;BRSQ=0.627;LDAF=0.0022;AVGPOST=0.9988;RSQ=0.7675;ERATE=0.0003;THETA=0.0001;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227070600 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0128;AVGPOST=1.0000;RSQ=0.9984;ERATE=0.0002;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 227070630 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8465;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227070676 . TTTC T 1921 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0082;AVGPOST=0.9992;RSQ=0.9614;ERATE=0.0002;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227070695 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4822;AVGPOST=0.9992;RSQ=0.9986;ERATE=0.0004;THETA=0.0002;AC=1051;AN=2184 GT:DS:GL:BD 0.48122710 0
1 227070757 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227070800 . ACCT A 1035 PASS INDEL;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0094;AVGPOST=0.9986;RSQ=0.9342;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 227070954 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0066;AVGPOST=0.9996;RSQ=0.9775;ERATE=0.0002;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 227070989 . ACT A 3787 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0196;AVGPOST=0.9989;RSQ=0.9781;ERATE=0.0003;THETA=0.0002;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 227071008 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0181;AVGPOST=0.9996;RSQ=0.9941;ERATE=0.0002;THETA=0.0003;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 227071036 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0079;AVGPOST=0.9997;RSQ=0.9877;ERATE=0.0002;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227071048 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8258;AVGPOST=0.9995;RSQ=0.9987;ERATE=0.0003;THETA=0.0003;AC=1803;AN=2184 GT:DS:GL:BD 0.82554942 1
1 227071065 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227071082 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227071124 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0129;AVGPOST=0.9998;RSQ=0.9937;ERATE=0.0003;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 227071271 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0038;AVGPOST=0.9988;RSQ=0.9041;ERATE=0.0002;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227071285 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0192;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 227071341 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227071364 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4821;AVGPOST=0.9999;RSQ=0.9998;ERATE=0.0002;THETA=0.0002;AC=1051;AN=2184 GT:DS:GL:BD 0.48122710 0
1 227071377 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6540;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1427;AN=2184 GT:DS:GL:BD 0.65338826 1
1 227071379 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9268;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227071383 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0215;AVGPOST=1.0000;RSQ=0.9991;ERATE=0.0002;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 227071430 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227071449 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0178;AVGPOST=1.0000;RSQ=0.9990;ERATE=0.0002;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 227071475 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9386;ERATE=0.0002;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227071525 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4822;AVGPOST=0.9999;RSQ=0.9998;ERATE=0.0002;THETA=0.0005;AC=1051;AN=2184 GT:DS:GL:BD 0.48122710 0
1 227071564 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9076;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227071703 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0499;AVGPOST=0.9998;RSQ=0.9984;ERATE=0.0002;THETA=0.0003;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 227071766 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1700;AVGPOST=0.9997;RSQ=0.9990;ERATE=0.0003;THETA=0.0034;AC=372;AN=2184 GT:DS:GL:BD 0.17032968 0
1 227071862 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.9272;ERATE=0.0002;THETA=0.0001;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227072001 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1707;AVGPOST=0.9994;RSQ=0.9980;ERATE=0.0003;THETA=0.0002;AC=373;AN=2184 GT:DS:GL:BD 0.17078754 0
1 227072061 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5749;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227072148 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0156;AVGPOST=0.9998;RSQ=0.9946;ERATE=0.0003;THETA=0.0002;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 227072267 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.935;LDAF=0.7108;AVGPOST=0.9474;RSQ=0.9105;ERATE=0.0134;THETA=0.0004;AC=1574;AN=2184 GT:DS:GL:BD 0.72069597 1
1 227072311 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0803;AVGPOST=0.9989;RSQ=0.9934;ERATE=0.0003;THETA=0.0001;AC=176;AN=2184 GT:DS:GL:BD 0.08058608 0
1 227072364 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.764;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7180;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227072488 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.844;LDAF=0.0035;AVGPOST=0.9976;RSQ=0.7553;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227072762 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7425;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227072831 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.7444;AVGPOST=0.9993;RSQ=0.9985;ERATE=0.0003;THETA=0.0002;AC=1625;AN=2184 GT:DS:GL:BD 0.74404764 1
1 227072840 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.972;LDAF=0.0285;AVGPOST=0.9978;RSQ=0.9698;ERATE=0.0002;THETA=0.0002;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 227072905 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9660;ERATE=0.0002;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227072935 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6362;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227072940 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0489;AVGPOST=0.9996;RSQ=0.9970;ERATE=0.0003;THETA=0.0004;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 227072955 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5921;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227072986 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7564;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227072988 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0156;AVGPOST=1.0000;RSQ=0.9986;ERATE=0.0002;THETA=0.0002;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 227073109 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227073111 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227073208 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227073248 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227073271 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227073305 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227073306 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227073323 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0156;AVGPOST=1.0000;RSQ=0.9986;ERATE=0.0002;THETA=0.0007;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 227073395 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227073404 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227073410 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7443;AVGPOST=0.9996;RSQ=0.9994;ERATE=0.0002;THETA=0.0003;AC=1625;AN=2184 GT:DS:GL:BD 0.74404764 1
1 227073420 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0002;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227073669 rs3831497 C CAAG 69554 PASS INDEL;BAVGPOST=0.945;BRSQ=0.911;LDAF=0.5551;AVGPOST=0.9614;RSQ=0.9410;ERATE=0.0047;THETA=0.0002;AC=1231;AN=2184 GT:DS:GL:BD 0.56364471 1
1 227073672 . G GAAT 42145 PASS INDEL;BAVGPOST=0.935;BRSQ=0.891;LDAF=0.5223;AVGPOST=0.9042;RSQ=0.8586;ERATE=0.0316;THETA=0.0004;AC=1165;AN=2184 GT:DS:GL:BD 0.53342491 1
1 227073706 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4820;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227073712 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.965;LDAF=0.5534;AVGPOST=0.9563;RSQ=0.9368;ERATE=0.0136;THETA=0.0002;AC=1221;AN=2184 GT:DS:GL:BD 0.55906594 1
1 227073735 . TA T 998 PASS INDEL;BAVGPOST=0.903;BRSQ=0.564;LDAF=0.1252;AVGPOST=0.8979;RSQ=0.6607;ERATE=0.0157;THETA=0.0003;AC=218;AN=2184 GT:DS:GL:BD 0.09981685 0
1 227073741 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2636;AVGPOST=0.9942;RSQ=0.9884;ERATE=0.0013;THETA=0.0003;AC=575;AN=2184 GT:DS:GL:BD 0.26327839 0
1 227073830 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5993;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227073853 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.882;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9857;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227073911 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0002;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227074002 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0678;AVGPOST=0.9992;RSQ=0.9955;ERATE=0.0002;THETA=0.0002;AC=148;AN=2184 GT:DS:GL:BD 0.06776557 0
1 227074047 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0108;AVGPOST=0.9982;RSQ=0.9394;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 227074125 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6532;AVGPOST=0.9973;RSQ=0.9952;ERATE=0.0004;THETA=0.0005;AC=1425;AN=2184 GT:DS:GL:BD 0.65247256 1
1 227074152 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0199;AVGPOST=0.9986;RSQ=0.9688;ERATE=0.0004;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 227074240 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.773;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.6318;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227074261 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5073;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227074278 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227074343 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0193;AVGPOST=0.9997;RSQ=0.9938;ERATE=0.0003;THETA=0.0022;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 227074353 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.800;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7193;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227074440 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9219;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227074625 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0130;AVGPOST=0.9997;RSQ=0.9888;ERATE=0.0003;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 227074681 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.912;LDAF=0.0126;AVGPOST=0.9983;RSQ=0.9396;ERATE=0.0003;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 227074682 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8693;ERATE=0.0003;THETA=0.0038;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227074703 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6288;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227074826 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.760;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8463;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227074911 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9998;RSQ=0.9716;ERATE=0.0002;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227075166 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227075364 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0036;AVGPOST=0.9991;RSQ=0.9009;ERATE=0.0006;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227075402 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.4851;AVGPOST=0.9967;RSQ=0.9949;ERATE=0.0008;THETA=0.0004;AC=1058;AN=2184 GT:DS:GL:BD 0.48443222 0
1 227075458 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.5706;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227075490 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227075539 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7618;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227075639 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227075643 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=1.0000;RSQ=0.9941;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227075671 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9943;ERATE=0.0003;THETA=0.0019;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227075844 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227075898 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227075916 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0106;AVGPOST=0.9999;RSQ=0.9958;ERATE=0.0002;THETA=0.0012;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 227075920 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0062;AVGPOST=0.9995;RSQ=0.9734;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227075939 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0073;AVGPOST=0.9998;RSQ=0.9858;ERATE=0.0002;THETA=0.0054;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 227075984 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0835;AVGPOST=0.9985;RSQ=0.9937;ERATE=0.0002;THETA=0.0055;AC=180;AN=2184 GT:DS:GL:BD 0.08241758 0
1 227076043 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7459;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227076060 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0665;AVGPOST=0.9990;RSQ=0.9939;ERATE=0.0002;THETA=0.0004;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 227076133 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8656;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227076223 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1649;AVGPOST=0.9990;RSQ=0.9971;ERATE=0.0003;THETA=0.0017;AC=361;AN=2184 GT:DS:GL:BD 0.16529304 0
1 227076280 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0041;AVGPOST=0.9989;RSQ=0.9084;ERATE=0.0002;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227076309 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0051;AVGPOST=1.0000;RSQ=0.9957;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227076419 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9571;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227076605 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7872;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227076653 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227076671 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0215;AVGPOST=0.9994;RSQ=0.9881;ERATE=0.0002;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 227076716 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227076717 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227076719 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9918;ERATE=0.0002;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227076816 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0389;AVGPOST=0.9998;RSQ=0.9976;ERATE=0.0003;THETA=0.0023;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 227076865 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0179;AVGPOST=0.9998;RSQ=0.9959;ERATE=0.0003;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 227076955 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0516;AVGPOST=0.9999;RSQ=0.9993;ERATE=0.0002;THETA=0.0003;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 227077070 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0031;AVGPOST=0.9994;RSQ=0.9009;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227077170 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5655;ERATE=0.0004;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227077542 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9741;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227077646 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0155;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 227077691 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0027;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227077740 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227077809 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0233;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 227077825 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227077849 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227077867 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227078067 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.982;LDAF=0.0279;AVGPOST=0.9989;RSQ=0.9854;ERATE=0.0003;THETA=0.0009;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 227078118 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0225;AVGPOST=0.9996;RSQ=0.9923;ERATE=0.0002;THETA=0.0004;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 227078228 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0064;AVGPOST=0.9983;RSQ=0.8954;ERATE=0.0002;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 227078356 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.651;LDAF=0.0016;AVGPOST=0.9982;RSQ=0.5924;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227078378 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0532;AVGPOST=0.9984;RSQ=0.9909;ERATE=0.0003;THETA=0.0004;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 227078474 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7878;ERATE=0.0003;THETA=0.0024;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227078499 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8763;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227078509 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.813;LDAF=0.0104;AVGPOST=0.9956;RSQ=0.8338;ERATE=0.0004;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 227078574 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.950;LDAF=0.0060;AVGPOST=0.9984;RSQ=0.9094;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227078592 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6498;AVGPOST=0.9983;RSQ=0.9976;ERATE=0.0003;THETA=0.0002;AC=1417;AN=2184 GT:DS:GL:BD 0.64880955 1
1 227078631 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.6049;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227078637 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0028;AVGPOST=0.9991;RSQ=0.8807;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227078721 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4812;AVGPOST=0.9987;RSQ=0.9982;ERATE=0.0004;THETA=0.0004;AC=1050;AN=2184 GT:DS:GL:BD 0.48076922 0
1 227078760 . T TAG 198 PASS INDEL;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6607;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227078828 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227078865 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227078875 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0045;AVGPOST=0.9992;RSQ=0.9285;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227078949 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8890;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227078955 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7450;AVGPOST=0.9988;RSQ=0.9982;ERATE=0.0002;THETA=0.0002;AC=1625;AN=2184 GT:DS:GL:BD 0.74404764 1
1 227078995 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0356;AVGPOST=1.0000;RSQ=0.9995;ERATE=0.0002;THETA=0.0002;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 227079007 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227079095 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227079127 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227079222 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.4819;AVGPOST=0.9995;RSQ=0.9992;ERATE=0.0003;THETA=0.0003;AC=1050;AN=2184 GT:DS:GL:BD 0.48076922 0
1 227079301 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0516;AVGPOST=0.9998;RSQ=0.9982;ERATE=0.0003;THETA=0.0002;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 227079407 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227079592 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227079643 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0082;AVGPOST=1.0000;RSQ=0.9973;ERATE=0.0002;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 227079673 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0179;AVGPOST=0.9997;RSQ=0.9931;ERATE=0.0002;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 227079700 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1548;AVGPOST=0.9994;RSQ=0.9982;ERATE=0.0003;THETA=0.0008;AC=338;AN=2184 GT:DS:GL:BD 0.15476191 0
1 227079714 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0517;AVGPOST=0.9999;RSQ=0.9990;ERATE=0.0002;THETA=0.0004;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 227079804 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0449;AVGPOST=0.9996;RSQ=0.9963;ERATE=0.0003;THETA=0.0003;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 227079819 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9985;RSQ=0.7918;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227079821 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1652;AVGPOST=0.9995;RSQ=0.9983;ERATE=0.0002;THETA=0.0005;AC=361;AN=2184 GT:DS:GL:BD 0.16529304 0
1 227080060 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0013;AVGPOST=0.9996;RSQ=0.8717;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227080166 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7432;AVGPOST=0.9992;RSQ=0.9983;ERATE=0.0003;THETA=0.0004;AC=1622;AN=2184 GT:DS:GL:BD 0.74267399 1
1 227080285 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.8411;AVGPOST=0.9988;RSQ=0.9966;ERATE=0.0003;THETA=0.0002;AC=1837;AN=2184 GT:DS:GL:BD 0.84111720 1
1 227080307 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0180;AVGPOST=0.9996;RSQ=0.9909;ERATE=0.0003;THETA=0.0002;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 227080342 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0139;AVGPOST=0.9984;RSQ=0.9536;ERATE=0.0003;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 227080452 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1652;AVGPOST=0.9989;RSQ=0.9969;ERATE=0.0003;THETA=0.0005;AC=361;AN=2184 GT:DS:GL:BD 0.16529304 0
1 227080459 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4818;AVGPOST=0.9996;RSQ=0.9994;ERATE=0.0003;THETA=0.0003;AC=1050;AN=2184 GT:DS:GL:BD 0.48076922 0
1 227080561 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0130;AVGPOST=0.9996;RSQ=0.9857;ERATE=0.0003;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 227080569 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9711;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227080590 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7682;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227080629 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8725;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227080665 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0030;AVGPOST=0.9988;RSQ=0.8630;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227080800 rs10693643 A ATT 9100 PASS INDEL;BAVGPOST=0.996;BRSQ=0.972;LDAF=0.0553;AVGPOST=0.9921;RSQ=0.9535;ERATE=0.0014;THETA=0.0003;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 227080841 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0179;AVGPOST=0.9998;RSQ=0.9948;ERATE=0.0002;THETA=0.0005;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 227080927 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6911;AVGPOST=0.9990;RSQ=0.9982;ERATE=0.0003;THETA=0.0004;AC=1509;AN=2184 GT:DS:GL:BD 0.69093406 1
1 227080951 . GA G 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0028;AVGPOST=0.9967;RSQ=0.5633;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227080984 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6910;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227081028 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4793;AVGPOST=0.9975;RSQ=0.9961;ERATE=0.0007;THETA=0.0006;AC=1046;AN=2184 GT:DS:GL:BD 0.47893772 0
1 227081033 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7664;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227081192 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.936;LDAF=0.9598;AVGPOST=0.9956;RSQ=0.9559;ERATE=0.0003;THETA=0.0003;AC=2097;AN=2184 GT:DS:GL:BD 0.96016484 1
1 227081254 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6265;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227081277 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0211;AVGPOST=0.9999;RSQ=0.9974;ERATE=0.0002;THETA=0.0003;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 227081305 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1644;AVGPOST=0.9992;RSQ=0.9975;ERATE=0.0004;THETA=0.0003;AC=360;AN=2184 GT:DS:GL:BD 0.16483517 0
1 227081361 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0004;AVGPOST=0.9994;RSQ=0.4121;ERATE=0.0002;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 227081442 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7425;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227081541 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0233;AVGPOST=0.9999;RSQ=0.9982;ERATE=0.0002;THETA=0.0003;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 227081563 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7927;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227081622 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7216;AVGPOST=0.9990;RSQ=0.9982;ERATE=0.0004;THETA=0.0004;AC=1575;AN=2184 GT:DS:GL:BD 0.72115386 1
1 227081670 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227081811 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227081812 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227081844 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227081850 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5897;AVGPOST=0.9989;RSQ=0.9984;ERATE=0.0019;THETA=0.0005;AC=1287;AN=2184 GT:DS:GL:BD 0.58928573 1
1 227081902 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9594;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227081930 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0082;AVGPOST=0.9997;RSQ=0.9850;ERATE=0.0002;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 227081992 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6288;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227082009 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0156;AVGPOST=0.9976;RSQ=0.9396;ERATE=0.0007;THETA=0.0005;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 227082067 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0234;AVGPOST=0.9999;RSQ=0.9981;ERATE=0.0002;THETA=0.0005;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 227082105 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1683;AVGPOST=0.9996;RSQ=0.9987;ERATE=0.0002;THETA=0.0004;AC=368;AN=2184 GT:DS:GL:BD 0.16849817 0
1 227082191 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0233;AVGPOST=0.9998;RSQ=0.9962;ERATE=0.0003;THETA=0.0014;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 227082226 . GT G 89 PASS INDEL;BAVGPOST=1.000;BRSQ=0.762;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227082248 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227082346 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8416;AVGPOST=0.9988;RSQ=0.9967;ERATE=0.0003;THETA=0.0004;AC=1837;AN=2184 GT:DS:GL:BD 0.84111720 1
1 227082434 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227082438 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0600;AVGPOST=0.9988;RSQ=0.9928;ERATE=0.0002;THETA=0.0002;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 227082445 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2306;AVGPOST=0.9992;RSQ=0.9981;ERATE=0.0003;THETA=0.0005;AC=504;AN=2184 GT:DS:GL:BD 0.23076923 0
1 227082452 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227082555 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7797;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227082559 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0236;AVGPOST=0.9995;RSQ=0.9902;ERATE=0.0003;THETA=0.0003;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 227082582 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9701;ERATE=0.0002;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227082583 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0361;AVGPOST=0.9990;RSQ=0.9913;ERATE=0.0003;THETA=0.0016;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 227082685 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0185;AVGPOST=0.9995;RSQ=0.9891;ERATE=0.0003;THETA=0.0004;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 227082693 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0389;AVGPOST=0.9997;RSQ=0.9971;ERATE=0.0003;THETA=0.0003;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 227082726 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.4897;AVGPOST=0.9980;RSQ=0.9969;ERATE=0.0007;THETA=0.0003;AC=1068;AN=2184 GT:DS:GL:BD 0.48901099 0
1 227082833 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7150;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227082967 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227083027 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227083060 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227083133 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0036;AVGPOST=1.0000;RSQ=0.9940;ERATE=0.0002;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227083250 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227083263 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227083400 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9764;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227083412 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8198;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227083496 . CG C 925 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0079;AVGPOST=0.9996;RSQ=0.9778;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227083550 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4902;AVGPOST=0.9984;RSQ=0.9976;ERATE=0.0003;THETA=0.0004;AC=1070;AN=2184 GT:DS:GL:BD 0.48992673 0
1 227083586 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8034;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227083685 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0002;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227083742 . C CA 82 PASS INDEL;BAVGPOST=0.999;BRSQ=0.654;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6818;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227083746 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227083767 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.877;LDAF=0.0078;AVGPOST=0.9995;RSQ=0.9727;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227083816 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0168;AVGPOST=0.9989;RSQ=0.9735;ERATE=0.0004;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 227083973 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8985;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227084009 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227084021 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5919;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227084129 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0555;AVGPOST=0.9995;RSQ=0.9967;ERATE=0.0002;THETA=0.0001;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 227084199 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0057;AVGPOST=0.9991;RSQ=0.9458;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227084243 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.8254;ERATE=0.0002;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227084370 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0017;AVGPOST=0.9987;RSQ=0.6633;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227084395 . C CA 87 PASS INDEL;BAVGPOST=0.998;BRSQ=0.561;LDAF=0.0087;AVGPOST=0.9878;RSQ=0.4962;ERATE=0.0015;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227084497 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0130;AVGPOST=0.9995;RSQ=0.9841;ERATE=0.0004;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 227084510 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0558;AVGPOST=0.9989;RSQ=0.9932;ERATE=0.0003;THETA=0.0005;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 227084534 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7945;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227084552 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.786;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7853;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227084554 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.788;LDAF=0.0027;AVGPOST=0.9981;RSQ=0.7470;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227084582 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5003;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227084620 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0234;AVGPOST=0.9998;RSQ=0.9953;ERATE=0.0003;THETA=0.0002;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 227084660 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.997;LDAF=0.3123;AVGPOST=0.9969;RSQ=0.9945;ERATE=0.0003;THETA=0.0002;AC=681;AN=2184 GT:DS:GL:BD 0.31181318 0
1 227084727 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0234;AVGPOST=0.9998;RSQ=0.9953;ERATE=0.0003;THETA=0.0006;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 227084885 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9698;ERATE=0.0002;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227084886 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9797;ERATE=0.0002;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227084927 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0021;AVGPOST=0.9990;RSQ=0.7916;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227084957 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0232;AVGPOST=0.9995;RSQ=0.9915;ERATE=0.0002;THETA=0.0004;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 227084990 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0117;AVGPOST=0.9995;RSQ=0.9819;ERATE=0.0002;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227085089 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0018;AVGPOST=0.9978;RSQ=0.5319;ERATE=0.0002;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227085096 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5809;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227085155 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3996;AVGPOST=0.9986;RSQ=0.9980;ERATE=0.0003;THETA=0.0003;AC=871;AN=2184 GT:DS:GL:BD 0.39880952 0
1 227085182 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0032;AVGPOST=0.9995;RSQ=0.9310;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227085308 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227085379 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227085394 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0049;AVGPOST=0.9994;RSQ=0.9430;ERATE=0.0002;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227085445 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0037;AVGPOST=0.9990;RSQ=0.8794;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227085446 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.730;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6936;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227085462 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2578;AVGPOST=0.9992;RSQ=0.9984;ERATE=0.0003;THETA=0.0004;AC=564;AN=2184 GT:DS:GL:BD 0.25824177 0
1 227085574 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0184;AVGPOST=0.9996;RSQ=0.9909;ERATE=0.0003;THETA=0.0003;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 227085616 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5542;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227085629 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.8042;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227085646 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2537;AVGPOST=0.9995;RSQ=0.9990;ERATE=0.0003;THETA=0.0004;AC=555;AN=2184 GT:DS:GL:BD 0.25412089 0
1 227085738 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.988;LDAF=0.2119;AVGPOST=0.9980;RSQ=0.9955;ERATE=0.0005;THETA=0.0011;AC=464;AN=2184 GT:DS:GL:BD 0.21245421 0
1 227085813 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.494;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.6947;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227085824 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.992;LDAF=0.5662;AVGPOST=0.9887;RSQ=0.9841;ERATE=0.0021;THETA=0.0004;AC=1235;AN=2184 GT:DS:GL:BD 0.56547618 1
1 227085837 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.744;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.6238;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227086025 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227086027 . AG A 381 PASS INDEL;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9483;ERATE=0.0002;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227086104 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9553;ERATE=0.0002;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227086153 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8333;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227086195 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1470;AVGPOST=0.9989;RSQ=0.9968;ERATE=0.0002;THETA=0.0005;AC=321;AN=2184 GT:DS:GL:BD 0.14697802 0
1 227086197 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1471;AVGPOST=0.9986;RSQ=0.9957;ERATE=0.0003;THETA=0.0003;AC=321;AN=2184 GT:DS:GL:BD 0.14697802 0
1 227086276 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0554;AVGPOST=0.9995;RSQ=0.9963;ERATE=0.0003;THETA=0.0003;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 227086336 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9614;ERATE=0.0002;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227086354 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.652;LDAF=0.0019;AVGPOST=0.9977;RSQ=0.4721;ERATE=0.0007;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227086391 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7165;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227086400 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.654;LDAF=0.0009;AVGPOST=0.9988;RSQ=0.3952;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227086407 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.689;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4778;ERATE=0.0005;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227086409 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.764;LDAF=0.0030;AVGPOST=0.9965;RSQ=0.5654;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227086471 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0045;AVGPOST=0.9982;RSQ=0.8654;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227086472 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0040;AVGPOST=0.9956;RSQ=0.5721;ERATE=0.0005;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227086496 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0149;AVGPOST=0.9994;RSQ=0.9819;ERATE=0.0003;THETA=0.0005;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 227086739 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9865;ERATE=0.0002;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227086854 . TG T 1483 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0129;AVGPOST=0.9997;RSQ=0.9904;ERATE=0.0003;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 227086890 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.687;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.5697;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227086903 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0043;AVGPOST=0.9984;RSQ=0.8864;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227086937 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4915;AVGPOST=0.9937;RSQ=0.9907;ERATE=0.0005;THETA=0.0005;AC=1070;AN=2184 GT:DS:GL:BD 0.48992673 0
1 227086959 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0361;AVGPOST=0.9989;RSQ=0.9913;ERATE=0.0003;THETA=0.0014;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 227087086 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.8199;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227087157 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8690;ERATE=0.0002;THETA=0.0019;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227087163 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7608;ERATE=0.0002;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227087243 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2504;AVGPOST=0.9987;RSQ=0.9974;ERATE=0.0004;THETA=0.0003;AC=548;AN=2184 GT:DS:GL:BD 0.25091577 0
1 227087380 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9865;ERATE=0.0002;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227087429 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0588;AVGPOST=0.9979;RSQ=0.9850;ERATE=0.0003;THETA=0.0009;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 227087478 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1524;AVGPOST=0.9986;RSQ=0.9958;ERATE=0.0003;THETA=0.0037;AC=334;AN=2184 GT:DS:GL:BD 0.15293041 0
1 227087576 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.0185;AVGPOST=0.9989;RSQ=0.9805;ERATE=0.0003;THETA=0.0111;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 227087601 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8703;ERATE=0.0003;THETA=0.0053;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227087726 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9261;ERATE=0.0002;THETA=0.0028;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227087735 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9858;ERATE=0.0002;THETA=0.0056;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227087755 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7242;ERATE=0.0003;THETA=0.0064;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227087780 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227087797 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.651;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.7753;ERATE=0.0003;THETA=0.0099;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227087798 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8190;ERATE=0.0002;THETA=0.0059;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227087837 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5967;ERATE=0.0002;THETA=0.0092;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227087853 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7089;ERATE=0.0003;THETA=0.0043;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227087897 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.908;LDAF=0.0109;AVGPOST=0.9974;RSQ=0.9138;ERATE=0.0004;THETA=0.0057;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 227087974 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.940;LDAF=0.0317;AVGPOST=0.9913;RSQ=0.8937;ERATE=0.0033;THETA=0.0006;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 227087994 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.869;LDAF=0.0062;AVGPOST=0.9988;RSQ=0.9236;ERATE=0.0003;THETA=0.0031;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227088067 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0038;AVGPOST=0.9995;RSQ=0.9374;ERATE=0.0003;THETA=0.0057;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227088123 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0175;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227088174 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7871;ERATE=0.0002;THETA=0.0102;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227088204 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0002;THETA=0.0029;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227088206 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0022;AVGPOST=0.9996;RSQ=0.9362;ERATE=0.0002;THETA=0.0045;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227088421 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.929;LDAF=0.0128;AVGPOST=0.9972;RSQ=0.9099;ERATE=0.0002;THETA=0.0073;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 227088445 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6199;ERATE=0.0002;THETA=0.0044;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227088492 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.909;LDAF=0.1205;AVGPOST=0.9705;RSQ=0.9031;ERATE=0.0203;THETA=0.0119;AC=251;AN=2184 GT:DS:GL:BD 0.11492674 0
1 227088591 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.969;LDAF=0.0952;AVGPOST=0.9885;RSQ=0.9555;ERATE=0.0059;THETA=0.0065;AC=201;AN=2184 GT:DS:GL:BD 0.09203297 0
1 227088606 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.953;LDAF=0.0327;AVGPOST=0.9961;RSQ=0.9548;ERATE=0.0006;THETA=0.0009;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 227088609 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6865;ERATE=0.0003;THETA=0.0102;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227088641 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6705;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227088726 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8436;ERATE=0.0004;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227088734 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.978;LDAF=0.0113;AVGPOST=0.9997;RSQ=0.9867;ERATE=0.0002;THETA=0.0069;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227088736 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0148;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227088832 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0065;AVGPOST=0.9994;RSQ=0.9540;ERATE=0.0003;THETA=0.0015;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 227088841 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9797;ERATE=0.0002;THETA=0.0044;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227088846 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.721;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227088861 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0026;AVGPOST=0.9970;RSQ=0.5759;ERATE=0.0004;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227088865 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9111;ERATE=0.0004;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227088903 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.641;LDAF=0.0149;AVGPOST=0.9848;RSQ=0.5855;ERATE=0.0040;THETA=0.0048;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 227088997 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.667;LDAF=0.0030;AVGPOST=0.9962;RSQ=0.5086;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227089078 . AG A 87 PASS INDEL;BAVGPOST=0.999;BRSQ=0.564;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4631;ERATE=0.0004;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227089124 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.744;LDAF=0.0062;AVGPOST=0.9935;RSQ=0.6215;ERATE=0.0010;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227089217 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0082;AVGPOST=0.9992;RSQ=0.9605;ERATE=0.0003;THETA=0.0042;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 227089242 . GC G 1115 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0079;AVGPOST=0.9997;RSQ=0.9807;ERATE=0.0002;THETA=0.0077;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227089293 . ATG A 1343 PASS INDEL;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0158;AVGPOST=0.9988;RSQ=0.9678;ERATE=0.0003;THETA=0.0082;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 227089298 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.827;LDAF=0.0026;AVGPOST=0.9983;RSQ=0.7373;ERATE=0.0003;THETA=0.0083;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227089357 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0142;AVGPOST=0.9997;RSQ=0.9913;ERATE=0.0002;THETA=0.0009;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 227089547 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0046;AVGPOST=0.9984;RSQ=0.8673;ERATE=0.0003;THETA=0.0135;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227089564 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.803;LDAF=0.0016;AVGPOST=0.9988;RSQ=0.7575;ERATE=0.0002;THETA=0.0061;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227089602 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6409;ERATE=0.0003;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227089676 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6237;ERATE=0.0002;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227089740 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6245;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227089760 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1705;AVGPOST=0.9975;RSQ=0.9930;ERATE=0.0003;THETA=0.0021;AC=371;AN=2184 GT:DS:GL:BD 0.16987179 0
1 227089762 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0035;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227089818 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0098;AVGPOST=0.9995;RSQ=0.9740;ERATE=0.0003;THETA=0.0016;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 227089862 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0706;AVGPOST=0.9985;RSQ=0.9923;ERATE=0.0003;THETA=0.0009;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 227089930 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.5952;AVGPOST=0.9967;RSQ=0.9944;ERATE=0.0004;THETA=0.0003;AC=1299;AN=2184 GT:DS:GL:BD 0.59478021 1
1 227089944 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0028;AVGPOST=0.9996;RSQ=0.9485;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227090006 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0150;AVGPOST=0.9984;RSQ=0.9540;ERATE=0.0003;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 227090074 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0097;AVGPOST=0.9995;RSQ=0.9775;ERATE=0.0003;THETA=0.0008;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 227090085 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0045;AVGPOST=0.9977;RSQ=0.7967;ERATE=0.0002;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227090091 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0025;AVGPOST=0.9984;RSQ=0.7632;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227090106 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0009;AVGPOST=0.9986;RSQ=0.5247;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227090108 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.871;LDAF=0.0029;AVGPOST=0.9986;RSQ=0.8078;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227090462 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227090500 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.2588;AVGPOST=0.9960;RSQ=0.9918;ERATE=0.0006;THETA=0.0003;AC=565;AN=2184 GT:DS:GL:BD 0.25869963 0
1 227090610 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9997;RSQ=0.9754;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227090657 rs10548662 CAT C 855 PASS INDEL;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0091;AVGPOST=0.9957;RSQ=0.8345;ERATE=0.0003;THETA=0.0001;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 227090659 rs10548662 TG T 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.6193;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227090698 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2270;AVGPOST=0.9979;RSQ=0.9957;ERATE=0.0005;THETA=0.0003;AC=494;AN=2184 GT:DS:GL:BD 0.22619048 0
1 227090717 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0071;AVGPOST=0.9982;RSQ=0.8879;ERATE=0.0006;THETA=0.0031;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 227090743 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6791;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227090930 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.845;LDAF=0.0032;AVGPOST=0.9974;RSQ=0.7322;ERATE=0.0005;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227091079 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0098;AVGPOST=0.9996;RSQ=0.9843;ERATE=0.0003;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 227091094 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227091153 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227091277 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0216;AVGPOST=0.9996;RSQ=0.9922;ERATE=0.0002;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 227091394 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0142;AVGPOST=0.9999;RSQ=0.9956;ERATE=0.0002;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 227091434 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.960;LDAF=0.0631;AVGPOST=0.9939;RSQ=0.9648;ERATE=0.0003;THETA=0.0003;AC=138;AN=2184 GT:DS:GL:BD 0.06318682 0
1 227091435 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.950;LDAF=0.0519;AVGPOST=0.9957;RSQ=0.9680;ERATE=0.0003;THETA=0.0004;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 227091608 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5313;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227091631 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0665;AVGPOST=0.9986;RSQ=0.9921;ERATE=0.0003;THETA=0.0007;AC=144;AN=2184 GT:DS:GL:BD 0.06593407 0
1 227091727 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5492;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227091793 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0021;AVGPOST=0.9987;RSQ=0.7765;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227091806 . ATT A 87 PASS INDEL;BAVGPOST=0.999;BRSQ=0.808;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7785;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227091947 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227092018 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7473;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227092219 . GAC G 306 PASS INDEL;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0030;AVGPOST=0.9968;RSQ=0.6146;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227092258 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.776;LDAF=0.0022;AVGPOST=0.9989;RSQ=0.8114;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227092291 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7012;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227092347 rs113463649 C CTGTT 58269 PASS INDEL;BAVGPOST=0.957;BRSQ=0.934;LDAF=0.5366;AVGPOST=0.9177;RSQ=0.8780;ERATE=0.0150;THETA=0.0002;AC=1184;AN=2184 GT:DS:GL:BD 0.54212457 1
1 227092352 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6461;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227092389 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.7546;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227092538 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.985;LDAF=0.1722;AVGPOST=0.9983;RSQ=0.9956;ERATE=0.0004;THETA=0.0002;AC=376;AN=2184 GT:DS:GL:BD 0.17216118 0
1 227092551 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.846;LDAF=0.0354;AVGPOST=0.9889;RSQ=0.8735;ERATE=0.0006;THETA=0.0002;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 227092616 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0243;AVGPOST=0.9952;RSQ=0.9154;ERATE=0.0008;THETA=0.0004;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 227092632 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.566;LDAF=0.9899;AVGPOST=0.9898;RSQ=0.5788;ERATE=0.0016;THETA=0.0003;AC=2169;AN=2184 GT:DS:GL:BD 0.99313188 1
1 227092656 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2337;AVGPOST=0.9979;RSQ=0.9962;ERATE=0.0005;THETA=0.0002;AC=510;AN=2184 GT:DS:GL:BD 0.23351648 0
1 227092723 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.673;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227092862 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2503;AVGPOST=0.9981;RSQ=0.9959;ERATE=0.0004;THETA=0.0002;AC=546;AN=2184 GT:DS:GL:BD 0.25000000 0
1 227092921 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.978;LDAF=0.2599;AVGPOST=0.9904;RSQ=0.9802;ERATE=0.0014;THETA=0.0004;AC=569;AN=2184 GT:DS:GL:BD 0.26053113 0
1 227092967 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0035;AVGPOST=0.9972;RSQ=0.6371;ERATE=0.0006;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227093306 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227093321 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.8546;AVGPOST=0.9991;RSQ=0.9971;ERATE=0.0003;THETA=0.0003;AC=1866;AN=2184 GT:DS:GL:BD 0.85439563 1
1 227093354 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0002;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227093400 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0063;AVGPOST=0.9992;RSQ=0.9424;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227093530 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0038;AVGPOST=0.9991;RSQ=0.9203;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227093557 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6746;AVGPOST=0.9987;RSQ=0.9978;ERATE=0.0003;THETA=0.0003;AC=1473;AN=2184 GT:DS:GL:BD 0.67445058 1
1 227093646 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6678;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227093824 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7063;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227093991 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9302;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227094270 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0709;AVGPOST=0.9999;RSQ=0.9991;ERATE=0.0002;THETA=0.0004;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 227094608 . TG T 696 PASS INDEL;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0057;AVGPOST=0.9970;RSQ=0.8180;ERATE=0.0004;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227094637 . AACTAG A 203 PASS INDEL;BAVGPOST=0.999;BRSQ=0.825;LDAF=0.0020;AVGPOST=0.9986;RSQ=0.7011;ERATE=0.0003;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227094863 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0001;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227094927 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.8983;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227095069 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.822;LDAF=0.0020;AVGPOST=0.9994;RSQ=0.8609;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227095070 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0142;AVGPOST=0.9999;RSQ=0.9956;ERATE=0.0002;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 227095152 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0140;AVGPOST=0.9994;RSQ=0.9826;ERATE=0.0002;THETA=0.0002;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 227095234 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6141;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227095335 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.790;LDAF=0.0028;AVGPOST=0.9979;RSQ=0.6627;ERATE=0.0008;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227095367 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.759;LDAF=0.0040;AVGPOST=0.9965;RSQ=0.6461;ERATE=0.0007;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227095433 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0684;AVGPOST=0.9985;RSQ=0.9919;ERATE=0.0002;THETA=0.0004;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 227095437 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.982;LDAF=0.0333;AVGPOST=0.9986;RSQ=0.9819;ERATE=0.0004;THETA=0.0003;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 227095535 . ATG A 78 PASS INDEL;BAVGPOST=0.991;BRSQ=0.653;LDAF=0.0199;AVGPOST=0.9810;RSQ=0.6145;ERATE=0.0095;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 227095536 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5873;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227095541 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9905;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227095549 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0027;AVGPOST=0.9985;RSQ=0.7581;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227095553 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6695;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227095556 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0019;AVGPOST=0.9991;RSQ=0.8127;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227095673 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9126;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227095724 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0058;AVGPOST=0.9994;RSQ=0.9554;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227095742 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227095788 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2210;AVGPOST=0.9993;RSQ=0.9985;ERATE=0.0002;THETA=0.0003;AC=483;AN=2184 GT:DS:GL:BD 0.22115384 0
1 227095845 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8799;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227095891 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8605;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227095950 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0235;AVGPOST=0.9975;RSQ=0.9548;ERATE=0.0003;THETA=0.0002;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 227095979 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7664;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227096158 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9858;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227096284 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9857;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227096293 . AG A 50 PASS INDEL;BAVGPOST=0.999;BRSQ=0.691;LDAF=0.0055;AVGPOST=0.9948;RSQ=0.6054;ERATE=0.0005;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227096409 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.700;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7966;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227096631 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0143;AVGPOST=0.9998;RSQ=0.9928;ERATE=0.0003;THETA=0.0007;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 227096662 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0075;AVGPOST=0.9985;RSQ=0.9271;ERATE=0.0003;THETA=0.0001;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227096665 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0223;AVGPOST=0.9991;RSQ=0.9831;ERATE=0.0002;THETA=0.0002;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 227096666 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.987;LDAF=0.2571;AVGPOST=0.9943;RSQ=0.9894;ERATE=0.0015;THETA=0.0002;AC=563;AN=2184 GT:DS:GL:BD 0.25778389 0
1 227096722 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7701;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227096924 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.8481;AVGPOST=0.9989;RSQ=0.9964;ERATE=0.0005;THETA=0.0003;AC=1852;AN=2184 GT:DS:GL:BD 0.84798533 1
1 227097022 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2350;AVGPOST=0.9989;RSQ=0.9979;ERATE=0.0003;THETA=0.0002;AC=514;AN=2184 GT:DS:GL:BD 0.23534799 0
1 227097039 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5984;AVGPOST=0.9984;RSQ=0.9972;ERATE=0.0004;THETA=0.0001;AC=1307;AN=2184 GT:DS:GL:BD 0.59844321 1
1 227097101 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0178;AVGPOST=0.9979;RSQ=0.9572;ERATE=0.0003;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 227097171 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.7862;ERATE=0.0006;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227097199 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.983;LDAF=0.3378;AVGPOST=0.9922;RSQ=0.9873;ERATE=0.0009;THETA=0.0002;AC=737;AN=2184 GT:DS:GL:BD 0.33745420 0
1 227097219 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.985;LDAF=0.3352;AVGPOST=0.9954;RSQ=0.9915;ERATE=0.0004;THETA=0.0008;AC=733;AN=2184 GT:DS:GL:BD 0.33562270 0
1 227097233 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.848;LDAF=0.0044;AVGPOST=0.9975;RSQ=0.7755;ERATE=0.0004;THETA=0.0021;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227097294 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.752;LDAF=0.0050;AVGPOST=0.9984;RSQ=0.8480;ERATE=0.0005;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227097391 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0716;AVGPOST=0.9990;RSQ=0.9942;ERATE=0.0004;THETA=0.0004;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 227097406 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6609;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227097407 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0717;AVGPOST=0.9987;RSQ=0.9922;ERATE=0.0003;THETA=0.0005;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 227097462 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0029;AVGPOST=0.9982;RSQ=0.7414;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227097608 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8627;ERATE=0.0003;THETA=0.0018;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227097694 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0263;AVGPOST=0.9989;RSQ=0.9811;ERATE=0.0003;THETA=0.0002;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 227098193 . TG T 16202 PASS INDEL;BAVGPOST=0.990;BRSQ=0.981;LDAF=0.3287;AVGPOST=0.9904;RSQ=0.9850;ERATE=0.0005;THETA=0.0002;AC=717;AN=2184 GT:DS:GL:BD 0.32829669 0
1 227098195 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.3302;AVGPOST=0.9925;RSQ=0.9882;ERATE=0.0003;THETA=0.0004;AC=720;AN=2184 GT:DS:GL:BD 0.32967034 0
1 227098197 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.989;LDAF=0.3304;AVGPOST=0.9925;RSQ=0.9882;ERATE=0.0003;THETA=0.0004;AC=720;AN=2184 GT:DS:GL:BD 0.32967034 0
1 227098197 . T TC 21212 PASS INDEL;BAVGPOST=0.990;BRSQ=0.979;LDAF=0.3317;AVGPOST=0.9923;RSQ=0.9882;ERATE=0.0004;THETA=0.0003;AC=723;AN=2184 GT:DS:GL:BD 0.33104396 0
1 227098296 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227098297 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9229;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227098359 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8712;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227098441 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1783;AVGPOST=0.9988;RSQ=0.9963;ERATE=0.0004;THETA=0.0004;AC=390;AN=2184 GT:DS:GL:BD 0.17857143 0
1 227098473 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0062;AVGPOST=0.9973;RSQ=0.8213;ERATE=0.0007;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227098521 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6318;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227098543 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0045;AVGPOST=0.9993;RSQ=0.9390;ERATE=0.0003;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227098588 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.2214;AVGPOST=0.9985;RSQ=0.9968;ERATE=0.0004;THETA=0.0004;AC=483;AN=2184 GT:DS:GL:BD 0.22115384 0
1 227098666 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3376;AVGPOST=0.9994;RSQ=0.9987;ERATE=0.0003;THETA=0.0003;AC=737;AN=2184 GT:DS:GL:BD 0.33745420 0
1 227098699 . TAA T 490 PASS INDEL;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0023;AVGPOST=0.9978;RSQ=0.6275;ERATE=0.0003;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227098702 . T TC 19 PASS INDEL;BAVGPOST=1.000;BRSQ=0.666;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.6119;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227098776 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1679;AVGPOST=0.9971;RSQ=0.9916;ERATE=0.0005;THETA=0.0003;AC=366;AN=2184 GT:DS:GL:BD 0.16758242 0
1 227098915 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0146;AVGPOST=0.9991;RSQ=0.9717;ERATE=0.0005;THETA=0.0002;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 227098962 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0058;AVGPOST=0.9967;RSQ=0.7911;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227098963 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.949;LDAF=0.0722;AVGPOST=0.9791;RSQ=0.8838;ERATE=0.0006;THETA=0.0003;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 227099014 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.544;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7002;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227099045 . G GA 84 PASS INDEL;BAVGPOST=0.989;BRSQ=0.500;LDAF=0.0278;AVGPOST=0.9619;RSQ=0.4715;ERATE=0.0053;THETA=0.0001;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 227099056 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0057;AVGPOST=0.9957;RSQ=0.7041;ERATE=0.0005;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227099235 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0151;AVGPOST=0.9979;RSQ=0.9424;ERATE=0.0003;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 227099249 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0235;AVGPOST=0.9981;RSQ=0.9642;ERATE=0.0004;THETA=0.0002;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 227099277 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9968;AVGPOST=0.9967;RSQ=0.5763;ERATE=0.0004;THETA=0.0002;AC=2179;AN=2184 GT:DS:GL:BD 0.99771065 1
1 227099419 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7558;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227099456 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6151;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227099526 . T TC 58 PASS INDEL;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0049;AVGPOST=0.9981;RSQ=0.8368;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227099687 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7778;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227099825 . AC A 241 PASS INDEL;BAVGPOST=0.999;BRSQ=0.618;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4828;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227099857 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.788;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5313;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227099874 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.967;LDAF=0.6573;AVGPOST=0.9702;RSQ=0.9549;ERATE=0.0047;THETA=0.0003;AC=1448;AN=2184 GT:DS:GL:BD 0.66300368 1
1 227099967 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9284;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227100260 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227100295 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0083;AVGPOST=0.9993;RSQ=0.9623;ERATE=0.0002;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 227100356 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7661;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227100490 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.813;LDAF=0.0063;AVGPOST=0.9966;RSQ=0.7842;ERATE=0.0004;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227100570 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0029;AVGPOST=0.9987;RSQ=0.8316;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227100607 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0055;AVGPOST=0.9987;RSQ=0.9012;ERATE=0.0007;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227100642 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0054;AVGPOST=0.9986;RSQ=0.8917;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227100684 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0046;AVGPOST=0.9990;RSQ=0.9232;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227100685 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0081;AVGPOST=0.9993;RSQ=0.9674;ERATE=0.0002;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227100808 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0028;AVGPOST=0.9988;RSQ=0.8168;ERATE=0.0002;THETA=0.0001;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227100861 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.8927;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227100954 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8945;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227101061 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0215;AVGPOST=0.9999;RSQ=0.9968;ERATE=0.0003;THETA=0.0002;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 227101098 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9329;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227101276 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6500;AVGPOST=0.9973;RSQ=0.9957;ERATE=0.0004;THETA=0.0002;AC=1418;AN=2184 GT:DS:GL:BD 0.64926738 1
1 227101347 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7608;ERATE=0.0002;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227101351 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.786;LDAF=0.0022;AVGPOST=0.9991;RSQ=0.8138;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227101489 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.730;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4936;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227101547 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7111;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227101686 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0024;AVGPOST=0.9965;RSQ=0.4896;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227101975 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6392;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227102033 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4123;AVGPOST=0.9982;RSQ=0.9971;ERATE=0.0004;THETA=0.0003;AC=899;AN=2184 GT:DS:GL:BD 0.41163003 0
1 227102034 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0144;AVGPOST=0.9996;RSQ=0.9869;ERATE=0.0003;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 227102044 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0044;AVGPOST=0.9996;RSQ=0.9748;ERATE=0.0002;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227102093 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0081;AVGPOST=0.9994;RSQ=0.9696;ERATE=0.0002;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227102100 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9734;ERATE=0.0002;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227102144 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0031;AVGPOST=0.9983;RSQ=0.8155;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227102156 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6947;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227102160 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227102383 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7071;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227102430 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227102534 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0017;AVGPOST=0.9979;RSQ=0.5128;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227102552 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.969;LDAF=0.0218;AVGPOST=0.9984;RSQ=0.9708;ERATE=0.0003;THETA=0.0004;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 227102553 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.619;LDAF=0.0129;AVGPOST=0.9870;RSQ=0.6254;ERATE=0.0029;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 227102606 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.769;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227102610 . C CA 154 PASS INDEL;BAVGPOST=0.970;BRSQ=0.541;LDAF=0.0538;AVGPOST=0.9317;RSQ=0.4718;ERATE=0.0127;THETA=0.0002;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 227102671 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.6715;AVGPOST=0.9951;RSQ=0.9919;ERATE=0.0006;THETA=0.0002;AC=1466;AN=2184 GT:DS:GL:BD 0.67124540 1
1 227102703 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0033;AVGPOST=0.9978;RSQ=0.7387;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227102814 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8610;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227102832 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6960;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227102833 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6620;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227102850 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5344;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227102898 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0083;AVGPOST=0.9999;RSQ=0.9947;ERATE=0.0002;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 227103101 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0085;AVGPOST=0.9994;RSQ=0.9689;ERATE=0.0003;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 227103123 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9747;ERATE=0.0002;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227103262 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0106;AVGPOST=0.9995;RSQ=0.9813;ERATE=0.0003;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 227103413 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3318;AVGPOST=0.9965;RSQ=0.9940;ERATE=0.0015;THETA=0.0002;AC=723;AN=2184 GT:DS:GL:BD 0.33104396 0
1 227103414 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227103433 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0002;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227103466 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3313;AVGPOST=0.9992;RSQ=0.9988;ERATE=0.0003;THETA=0.0003;AC=723;AN=2184 GT:DS:GL:BD 0.33104396 0
1 227103470 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9478;ERATE=0.0002;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227103570 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0216;AVGPOST=0.9998;RSQ=0.9958;ERATE=0.0003;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 227103633 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7845;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227103736 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8332;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227103908 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9571;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227103985 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3163;AVGPOST=0.9983;RSQ=0.9970;ERATE=0.0004;THETA=0.0007;AC=690;AN=2184 GT:DS:GL:BD 0.31593406 0
1 227104010 rs71772923 A AT 20479 PASS INDEL;BAVGPOST=0.981;BRSQ=0.965;LDAF=0.3168;AVGPOST=0.9521;RSQ=0.9278;ERATE=0.0113;THETA=0.0002;AC=685;AN=2184 GT:DS:GL:BD 0.31364468 0
1 227104184 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.804;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8453;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227104266 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0025;AVGPOST=0.9974;RSQ=0.6183;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227104329 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0215;AVGPOST=1.0000;RSQ=0.9989;ERATE=0.0002;THETA=0.0002;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 227104351 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227104399 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9443;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227104639 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7210;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227104645 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8044;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227104663 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8625;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227104807 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.5962;AVGPOST=0.9964;RSQ=0.9942;ERATE=0.0007;THETA=0.0003;AC=1302;AN=2184 GT:DS:GL:BD 0.59615386 1
1 227104816 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0055;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227104977 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2682;AVGPOST=0.9975;RSQ=0.9943;ERATE=0.0004;THETA=0.0023;AC=586;AN=2184 GT:DS:GL:BD 0.26831502 0
1 227105053 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1892;AVGPOST=0.9989;RSQ=0.9968;ERATE=0.0003;THETA=0.0002;AC=414;AN=2184 GT:DS:GL:BD 0.18956044 0
1 227105102 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.589;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6471;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227105120 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7386;ERATE=0.0002;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227105156 . CA C 47 PASS INDEL;BAVGPOST=0.990;BRSQ=0.080;LDAF=0.0290;AVGPOST=0.9717;RSQ=0.5867;ERATE=0.0018;THETA=0.0006;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 227105158 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8090;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227105173 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227105208 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.986;LDAF=0.1119;AVGPOST=0.9952;RSQ=0.9834;ERATE=0.0006;THETA=0.0002;AC=243;AN=2184 GT:DS:GL:BD 0.11126374 0
1 227105214 . G GT 343 PASS INDEL;BAVGPOST=0.998;BRSQ=0.779;LDAF=0.0073;AVGPOST=0.9913;RSQ=0.5370;ERATE=0.0026;THETA=0.0033;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227105232 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0042;AVGPOST=0.9985;RSQ=0.8656;ERATE=0.0002;THETA=0.0014;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227105274 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.899;LDAF=0.0032;AVGPOST=0.9989;RSQ=0.8826;ERATE=0.0004;THETA=0.0068;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227105287 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0269;AVGPOST=0.9979;RSQ=0.9709;ERATE=0.0011;THETA=0.0003;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 227105299 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0064;AVGPOST=0.9995;RSQ=0.9675;ERATE=0.0002;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 227105307 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0038;AVGPOST=0.9998;RSQ=0.9716;ERATE=0.0003;THETA=0.0001;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227105309 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9334;ERATE=0.0003;THETA=0.0027;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227105344 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7496;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227105442 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1604;AVGPOST=0.9984;RSQ=0.9952;ERATE=0.0004;THETA=0.0008;AC=350;AN=2184 GT:DS:GL:BD 0.16025642 0
1 227105655 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2883;AVGPOST=0.9970;RSQ=0.9947;ERATE=0.0005;THETA=0.0002;AC=629;AN=2184 GT:DS:GL:BD 0.28800365 0
1 227105819 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9549;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227106054 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227106100 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9330;ERATE=0.0002;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227106161 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6340;ERATE=0.0003;THETA=0.0054;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227106314 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227106426 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227106492 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8230;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227106587 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9988;RSQ=0.9176;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227106602 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9525;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227106615 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8096;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227106624 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227106696 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6586;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227106770 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6468;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227106850 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227106886 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.851;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6494;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227106950 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1143;AVGPOST=0.9983;RSQ=0.9937;ERATE=0.0004;THETA=0.0016;AC=249;AN=2184 GT:DS:GL:BD 0.11401099 0
1 227107012 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.1100;AVGPOST=0.9992;RSQ=0.9965;ERATE=0.0003;THETA=0.0014;AC=240;AN=2184 GT:DS:GL:BD 0.10989011 0
1 227107027 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1102;AVGPOST=0.9990;RSQ=0.9959;ERATE=0.0004;THETA=0.0006;AC=240;AN=2184 GT:DS:GL:BD 0.10989011 0
1 227107137 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8879;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227107156 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1202;AVGPOST=0.9987;RSQ=0.9958;ERATE=0.0003;THETA=0.0004;AC=263;AN=2184 GT:DS:GL:BD 0.12042125 0
1 227107201 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9568;ERATE=0.0003;THETA=0.0026;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227107259 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2704;AVGPOST=0.9982;RSQ=0.9968;ERATE=0.0004;THETA=0.0004;AC=588;AN=2184 GT:DS:GL:BD 0.26923078 0
1 227107477 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6343;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227107543 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0131;AVGPOST=0.9993;RSQ=0.9783;ERATE=0.0002;THETA=0.0002;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 227107625 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6158;AVGPOST=0.9975;RSQ=0.9962;ERATE=0.0003;THETA=0.0004;AC=1343;AN=2184 GT:DS:GL:BD 0.61492676 1
1 227107664 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7737;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227107680 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0212;AVGPOST=0.9997;RSQ=0.9937;ERATE=0.0002;THETA=0.0002;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 227107710 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0082;AVGPOST=1.0000;RSQ=0.9973;ERATE=0.0002;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 227107840 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0014;AVGPOST=0.9992;RSQ=0.7703;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227107871 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227107912 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1604;AVGPOST=0.9983;RSQ=0.9947;ERATE=0.0004;THETA=0.0005;AC=349;AN=2184 GT:DS:GL:BD 0.15979853 0
1 227107984 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.994;LDAF=0.6156;AVGPOST=0.9985;RSQ=0.9974;ERATE=0.0003;THETA=0.0002;AC=1345;AN=2184 GT:DS:GL:BD 0.61584246 1
1 227108006 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0092;AVGPOST=0.9998;RSQ=0.9882;ERATE=0.0002;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 227108021 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0304;AVGPOST=0.9993;RSQ=0.9886;ERATE=0.0003;THETA=0.0003;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 227108023 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9543;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227108101 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227108108 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.863;LDAF=0.0036;AVGPOST=0.9990;RSQ=0.8728;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227108127 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227108174 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227108175 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7150;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227108199 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1102;AVGPOST=0.9994;RSQ=0.9978;ERATE=0.0002;THETA=0.0013;AC=240;AN=2184 GT:DS:GL:BD 0.10989011 0
1 227108236 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0046;AVGPOST=0.9988;RSQ=0.9069;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227108344 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227108408 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5611;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227108443 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.739;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6329;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227108504 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8493;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227108654 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0130;AVGPOST=0.9995;RSQ=0.9826;ERATE=0.0003;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 227108658 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0176;AVGPOST=0.9979;RSQ=0.9574;ERATE=0.0003;THETA=0.0002;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 227108818 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1707;AVGPOST=0.9993;RSQ=0.9976;ERATE=0.0002;THETA=0.0004;AC=373;AN=2184 GT:DS:GL:BD 0.17078754 0
1 227108947 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9726;ERATE=0.0002;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227108964 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0017;AVGPOST=0.9981;RSQ=0.5669;ERATE=0.0010;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227109034 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5774;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227109065 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227109128 . C CAT 137 PASS INDEL;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7891;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227109157 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0091;AVGPOST=0.9999;RSQ=0.9930;ERATE=0.0002;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 227109319 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9545;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227109335 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6158;AVGPOST=0.9986;RSQ=0.9976;ERATE=0.0004;THETA=0.0002;AC=1346;AN=2184 GT:DS:GL:BD 0.61630034 1
1 227109372 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0051;AVGPOST=0.9989;RSQ=0.9158;ERATE=0.0002;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227109402 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0018;AVGPOST=1.0000;RSQ=0.9879;ERATE=0.0002;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227109444 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9995;RSQ=0.9555;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227109450 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6318;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227109489 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.725;LDAF=0.0007;AVGPOST=0.9990;RSQ=0.4759;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227109494 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227109511 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0053;AVGPOST=0.9994;RSQ=0.9460;ERATE=0.0003;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227109551 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.909;LDAF=0.0032;AVGPOST=0.9989;RSQ=0.8613;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227109594 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.848;LDAF=0.0055;AVGPOST=0.9981;RSQ=0.8735;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227109639 . T TC 3898 PASS INDEL;BAVGPOST=0.998;BRSQ=0.978;LDAF=0.0225;AVGPOST=0.9974;RSQ=0.9553;ERATE=0.0002;THETA=0.0010;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 227109822 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0167;AVGPOST=0.9991;RSQ=0.9776;ERATE=0.0003;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 227109856 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6364;ERATE=0.0006;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227109860 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0045;AVGPOST=0.9991;RSQ=0.9459;ERATE=0.0002;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227109871 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7415;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227109948 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6145;AVGPOST=0.9969;RSQ=0.9950;ERATE=0.0004;THETA=0.0003;AC=1344;AN=2184 GT:DS:GL:BD 0.61538464 1
1 227110105 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1638;AVGPOST=0.9969;RSQ=0.9915;ERATE=0.0008;THETA=0.0016;AC=355;AN=2184 GT:DS:GL:BD 0.16254579 0
1 227110121 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0184;AVGPOST=0.9990;RSQ=0.9806;ERATE=0.0003;THETA=0.0003;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 227110126 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0142;AVGPOST=1.0000;RSQ=0.9987;ERATE=0.0002;THETA=0.0012;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 227110156 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6545;ERATE=0.0002;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227110230 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9511;ERATE=0.0002;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227110403 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.873;LDAF=0.0114;AVGPOST=0.9964;RSQ=0.8749;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 227110461 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6808;ERATE=0.0003;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227110491 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8474;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227110533 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0045;AVGPOST=0.9994;RSQ=0.9480;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227110539 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0145;AVGPOST=0.9987;RSQ=0.9653;ERATE=0.0003;THETA=0.0018;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 227110547 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0134;AVGPOST=0.9996;RSQ=0.9870;ERATE=0.0003;THETA=0.0013;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 227110642 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0124;AVGPOST=0.9999;RSQ=0.9946;ERATE=0.0002;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 227110750 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.970;LDAF=0.2846;AVGPOST=0.9828;RSQ=0.9698;ERATE=0.0020;THETA=0.0040;AC=613;AN=2184 GT:DS:GL:BD 0.28067765 0
1 227110781 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9296;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227110873 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0119;AVGPOST=0.9999;RSQ=0.9963;ERATE=0.0002;THETA=0.0046;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 227110919 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1097;AVGPOST=0.9988;RSQ=0.9948;ERATE=0.0004;THETA=0.0003;AC=239;AN=2184 GT:DS:GL:BD 0.10943224 0
1 227111026 . CAT C 1388 PASS INDEL;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9691;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227111112 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227111142 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9690;ERATE=0.0002;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227111247 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0121;AVGPOST=0.9992;RSQ=0.9728;ERATE=0.0003;THETA=0.0017;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 227111370 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9468;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227111380 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9145;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227111381 . TAAAG T 2318 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0087;AVGPOST=0.9991;RSQ=0.9572;ERATE=0.0003;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 227111456 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0005;AVGPOST=0.9989;RSQ=0.2033;ERATE=0.0003;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 227111476 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6524;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227111521 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.977;LDAF=0.0220;AVGPOST=0.9988;RSQ=0.9752;ERATE=0.0003;THETA=0.0008;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 227111675 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0050;AVGPOST=0.9995;RSQ=0.9545;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227111719 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9757;ERATE=0.0003;THETA=0.0001;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227111730 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227112116 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.818;LDAF=0.0059;AVGPOST=0.9981;RSQ=0.8670;ERATE=0.0003;THETA=0.0029;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227112163 . CT C 128 PASS INDEL;BAVGPOST=0.998;BRSQ=0.898;LDAF=0.0047;AVGPOST=0.9967;RSQ=0.7558;ERATE=0.0004;THETA=0.0019;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227112221 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.971;LDAF=0.1897;AVGPOST=0.9975;RSQ=0.9937;ERATE=0.0003;THETA=0.0006;AC=413;AN=2184 GT:DS:GL:BD 0.18910256 0
1 227112351 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7604;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227112430 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7691;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227112441 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.989;LDAF=0.1887;AVGPOST=0.9955;RSQ=0.9885;ERATE=0.0004;THETA=0.0004;AC=412;AN=2184 GT:DS:GL:BD 0.18864469 0
1 227112481 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0125;AVGPOST=0.9997;RSQ=0.9895;ERATE=0.0003;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 227112524 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1471;AVGPOST=0.9985;RSQ=0.9958;ERATE=0.0003;THETA=0.0005;AC=320;AN=2184 GT:DS:GL:BD 0.14652015 0
1 227112579 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227112717 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0089;AVGPOST=0.9987;RSQ=0.9334;ERATE=0.0004;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 227112750 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.3759;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227112757 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.786;LDAF=0.0072;AVGPOST=0.9959;RSQ=0.7748;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227112828 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.677;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7282;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227112871 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7512;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227112976 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0090;AVGPOST=0.9988;RSQ=0.9449;ERATE=0.0002;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 227112998 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.0239;AVGPOST=0.9989;RSQ=0.9822;ERATE=0.0003;THETA=0.0002;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 227113081 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9895;ERATE=0.0002;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227113083 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.691;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227113200 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5216;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227113428 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.849;LDAF=0.0702;AVGPOST=0.9921;RSQ=0.9561;ERATE=0.0005;THETA=0.0003;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 227113624 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9988;RSQ=0.8635;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227113668 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6255;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227113675 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6318;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227113802 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4685;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227114045 . GA G 296 PASS INDEL;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0065;AVGPOST=0.9952;RSQ=0.7075;ERATE=0.0005;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227114321 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.775;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4256;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227114369 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0215;AVGPOST=0.9979;RSQ=0.9632;ERATE=0.0003;THETA=0.0004;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 227114388 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.0260;AVGPOST=0.9989;RSQ=0.9842;ERATE=0.0004;THETA=0.0002;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 227114424 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0039;AVGPOST=0.9983;RSQ=0.8115;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227114429 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6714;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227114524 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5490;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227114592 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.963;BRSQ=0.942;LDAF=0.5588;AVGPOST=0.9444;RSQ=0.9279;ERATE=0.0131;THETA=0.0003;AC=1233;AN=2184 GT:DS:GL:BD 0.56456041 1
1 227114962 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.660;LDAF=0.0096;AVGPOST=0.9895;RSQ=0.5860;ERATE=0.0005;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 227115024 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.943;BRSQ=0.264;LDAF=0.9251;AVGPOST=0.8870;RSQ=0.3874;ERATE=0.0109;THETA=0.0001;AC=2087;AN=2184 GT:DS:GL:BD 0.95558608 1
1 227115486 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.868;LDAF=0.0304;AVGPOST=0.9866;RSQ=0.8415;ERATE=0.0007;THETA=0.0002;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 227115572 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9460;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227115798 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0026;AVGPOST=0.9964;RSQ=0.4938;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227115901 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.881;LDAF=0.0079;AVGPOST=0.9978;RSQ=0.8876;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 227115942 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227116001 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0017;AVGPOST=0.9979;RSQ=0.6184;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227116301 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5767;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227116448 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.965;BRSQ=0.789;LDAF=0.0818;AVGPOST=0.9856;RSQ=0.9342;ERATE=0.0006;THETA=0.0002;AC=181;AN=2184 GT:DS:GL:BD 0.08287546 0
1 227116833 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.890;LDAF=0.0094;AVGPOST=0.9971;RSQ=0.8878;ERATE=0.0003;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 227117180 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.902;LDAF=0.0098;AVGPOST=0.9986;RSQ=0.9478;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 227117181 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.461;LDAF=0.0083;AVGPOST=0.9894;RSQ=0.5135;ERATE=0.0028;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227117263 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.759;LDAF=0.0047;AVGPOST=0.9979;RSQ=0.8135;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227117270 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5517;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227117297 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.734;LDAF=0.0105;AVGPOST=0.9939;RSQ=0.7981;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 227117377 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.1102;AVGPOST=0.9970;RSQ=0.9871;ERATE=0.0006;THETA=0.0003;AC=240;AN=2184 GT:DS:GL:BD 0.10989011 0
1 227117462 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0124;AVGPOST=1.0000;RSQ=0.9982;ERATE=0.0002;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 227117468 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7404;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227117473 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6701;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227117482 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7608;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227117556 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.913;LDAF=0.1073;AVGPOST=0.9894;RSQ=0.9619;ERATE=0.0006;THETA=0.0003;AC=233;AN=2184 GT:DS:GL:BD 0.10668498 0
1 227117595 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.986;LDAF=0.1360;AVGPOST=0.9970;RSQ=0.9903;ERATE=0.0003;THETA=0.0003;AC=298;AN=2184 GT:DS:GL:BD 0.13644689 0
1 227117699 . CCAAA C 174 PASS INDEL;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0051;AVGPOST=0.9987;RSQ=0.8863;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227117760 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.580;LDAF=0.0019;AVGPOST=0.9971;RSQ=0.3753;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227118017 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0035;AVGPOST=0.9985;RSQ=0.8272;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227118174 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0109;AVGPOST=0.9991;RSQ=0.9680;ERATE=0.0002;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 227118184 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.2864;AVGPOST=0.9955;RSQ=0.9908;ERATE=0.0005;THETA=0.0002;AC=628;AN=2184 GT:DS:GL:BD 0.28754580 0
1 227118218 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.973;LDAF=0.1440;AVGPOST=0.9949;RSQ=0.9847;ERATE=0.0006;THETA=0.0006;AC=316;AN=2184 GT:DS:GL:BD 0.14468865 0
1 227118244 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0053;AVGPOST=0.9986;RSQ=0.8775;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227118450 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1349;AVGPOST=0.9997;RSQ=0.9988;ERATE=0.0003;THETA=0.0003;AC=294;AN=2184 GT:DS:GL:BD 0.13461539 0
1 227118455 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.788;LDAF=0.0096;AVGPOST=0.9959;RSQ=0.8576;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 227118489 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4711;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227118501 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.9228;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227118687 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1348;AVGPOST=0.9997;RSQ=0.9988;ERATE=0.0002;THETA=0.0003;AC=294;AN=2184 GT:DS:GL:BD 0.13461539 0
1 227118741 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1365;AVGPOST=0.9979;RSQ=0.9938;ERATE=0.0003;THETA=0.0003;AC=298;AN=2184 GT:DS:GL:BD 0.13644689 0
1 227118794 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9696;ERATE=0.0002;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227118876 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0043;AVGPOST=0.9994;RSQ=0.9378;ERATE=0.0002;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227118892 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6545;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227118912 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5936;AVGPOST=0.9960;RSQ=0.9946;ERATE=0.0003;THETA=0.0004;AC=1296;AN=2184 GT:DS:GL:BD 0.59340662 1
1 227119097 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227119204 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.838;LDAF=0.0090;AVGPOST=0.9965;RSQ=0.8492;ERATE=0.0003;THETA=0.0075;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 227119271 . AT A 74 PASS INDEL;BAVGPOST=0.998;BRSQ=0.612;LDAF=0.0017;AVGPOST=0.9974;RSQ=0.3410;ERATE=0.0007;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227119463 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0167;AVGPOST=0.9993;RSQ=0.9863;ERATE=0.0002;THETA=0.0005;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 227119492 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0034;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227119530 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7753;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227119709 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9670;ERATE=0.0003;THETA=0.0017;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227119801 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5491;ERATE=0.0003;THETA=0.0037;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227119838 rs5781450 AATGTGTT A 35421 PASS INDEL;BAVGPOST=0.965;BRSQ=0.939;LDAF=0.3316;AVGPOST=0.9654;RSQ=0.9461;ERATE=0.0059;THETA=0.0007;AC=728;AN=2184 GT:DS:GL:BD 0.33333334 0
1 227119931 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.422;LDAF=0.0107;AVGPOST=0.9872;RSQ=0.5243;ERATE=0.0010;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227120056 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.698;LDAF=0.0070;AVGPOST=0.9947;RSQ=0.6863;ERATE=0.0009;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227120138 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.753;LDAF=0.0034;AVGPOST=0.9969;RSQ=0.6129;ERATE=0.0006;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227120141 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0056;AVGPOST=0.9986;RSQ=0.8929;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227120145 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.0081;AVGPOST=0.9951;RSQ=0.7689;ERATE=0.0005;THETA=0.0018;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 227120183 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.547;LDAF=0.0051;AVGPOST=0.9941;RSQ=0.5795;ERATE=0.0006;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227120277 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0034;AVGPOST=0.9994;RSQ=0.9199;ERATE=0.0003;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227120462 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.768;LDAF=0.0036;AVGPOST=0.9977;RSQ=0.7677;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227120607 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6745;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227120696 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0170;AVGPOST=0.9996;RSQ=0.9896;ERATE=0.0002;THETA=0.0019;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 227120793 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.650;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8796;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227120900 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0023;AVGPOST=0.9975;RSQ=0.5801;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227120927 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.863;LDAF=0.0597;AVGPOST=0.9803;RSQ=0.8656;ERATE=0.0011;THETA=0.0004;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 227120970 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8542;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227121054 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0153;AVGPOST=0.9988;RSQ=0.9739;ERATE=0.0003;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 227121099 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5909;AVGPOST=0.9972;RSQ=0.9957;ERATE=0.0005;THETA=0.0012;AC=1293;AN=2184 GT:DS:GL:BD 0.59203297 1
1 227121142 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9480;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227121242 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.955;LDAF=0.0234;AVGPOST=0.9941;RSQ=0.9051;ERATE=0.0004;THETA=0.0021;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 227121303 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9676;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227121398 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.967;BRSQ=0.946;LDAF=0.5821;AVGPOST=0.9865;RSQ=0.9812;ERATE=0.0009;THETA=0.0004;AC=1281;AN=2184 GT:DS:GL:BD 0.58653843 1
1 227121440 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0088;AVGPOST=0.9983;RSQ=0.9223;ERATE=0.0004;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 227121462 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.884;LDAF=0.0111;AVGPOST=0.9985;RSQ=0.9503;ERATE=0.0004;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 227121535 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9490;ERATE=0.0002;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227121558 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0046;AVGPOST=0.9995;RSQ=0.9465;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227121739 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6932;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227121947 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0036;AVGPOST=0.9978;RSQ=0.7203;ERATE=0.0005;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227122188 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0030;AVGPOST=0.9986;RSQ=0.8442;ERATE=0.0002;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227122193 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0070;AVGPOST=0.9998;RSQ=0.9842;ERATE=0.0003;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 227122231 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.1800;AVGPOST=0.9963;RSQ=0.9901;ERATE=0.0003;THETA=0.0006;AC=393;AN=2184 GT:DS:GL:BD 0.17994505 0
1 227122255 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.8136;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227122261 . TAACTG T 3790 PASS INDEL;BAVGPOST=0.998;BRSQ=0.942;LDAF=0.0151;AVGPOST=0.9977;RSQ=0.9358;ERATE=0.0005;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 227122264 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.848;LDAF=0.0118;AVGPOST=0.9948;RSQ=0.8388;ERATE=0.0005;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 227122280 . AG A 46 PASS INDEL;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0017;AVGPOST=0.9976;RSQ=0.4709;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227122370 . G GA 85 PASS INDEL;BAVGPOST=0.994;BRSQ=0.596;LDAF=0.0122;AVGPOST=0.9835;RSQ=0.4843;ERATE=0.0040;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227122485 . CAG C 2436 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0147;AVGPOST=0.9998;RSQ=0.9939;ERATE=0.0002;THETA=0.0008;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 227122568 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7094;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227122599 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0047;AVGPOST=0.9995;RSQ=0.9539;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227122674 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0047;AVGPOST=0.9978;RSQ=0.8412;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227122684 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.726;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6540;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227122685 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8712;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227122738 . C CT 61 PASS INDEL;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4765;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227122746 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.756;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227122772 . AAAAAC A 841 PASS INDEL;BAVGPOST=0.999;BRSQ=0.871;LDAF=0.0055;AVGPOST=0.9990;RSQ=0.9339;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227122802 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0152;AVGPOST=0.9988;RSQ=0.9761;ERATE=0.0003;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 227122917 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9568;ERATE=0.0002;THETA=0.0012;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227122921 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0070;AVGPOST=0.9998;RSQ=0.9842;ERATE=0.0003;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 227122922 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0853;AVGPOST=0.9992;RSQ=0.9956;ERATE=0.0003;THETA=0.0003;AC=185;AN=2184 GT:DS:GL:BD 0.08470696 0
1 227123034 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227123088 . AAG A 924 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9936;ERATE=0.0002;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 227123205 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8813;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227123315 . TA T 75 PASS INDEL;BAVGPOST=0.999;BRSQ=0.778;LDAF=0.0028;AVGPOST=0.9983;RSQ=0.7606;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227123350 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.728;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8300;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227123529 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4746;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227123552 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0071;AVGPOST=0.9995;RSQ=0.9642;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 227123560 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.860;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8387;ERATE=0.0003;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227123571 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6737;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227123580 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.986;LDAF=0.0752;AVGPOST=0.9960;RSQ=0.9813;ERATE=0.0002;THETA=0.0003;AC=165;AN=2184 GT:DS:GL:BD 0.07554945 0
1 227123601 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9597;ERATE=0.0002;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227123657 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1006;AVGPOST=0.9979;RSQ=0.9906;ERATE=0.0006;THETA=0.0007;AC=218;AN=2184 GT:DS:GL:BD 0.09981685 0
1 227123702 rs34739874 ATATCT A 20322 PASS INDEL;BAVGPOST=0.985;BRSQ=0.947;LDAF=0.1530;AVGPOST=0.9965;RSQ=0.9901;ERATE=0.0003;THETA=0.0005;AC=333;AN=2184 GT:DS:GL:BD 0.15247253 0
1 227123769 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0097;AVGPOST=0.9988;RSQ=0.9533;ERATE=0.0002;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 227123787 . CTA C 642 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9433;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227123825 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5353;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227123870 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7941;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227123947 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.661;LDAF=0.0069;AVGPOST=0.9919;RSQ=0.5441;ERATE=0.0011;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227123960 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.577;LDAF=0.0080;AVGPOST=0.9917;RSQ=0.6109;ERATE=0.0004;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 227123964 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.5869;AVGPOST=0.9878;RSQ=0.9826;ERATE=0.0006;THETA=0.0030;AC=1287;AN=2184 GT:DS:GL:BD 0.58928573 1
1 227123988 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.2732;AVGPOST=0.9869;RSQ=0.9752;ERATE=0.0007;THETA=0.0006;AC=600;AN=2184 GT:DS:GL:BD 0.27472529 0
1 227124039 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.984;LDAF=0.1134;AVGPOST=0.9945;RSQ=0.9811;ERATE=0.0006;THETA=0.0001;AC=246;AN=2184 GT:DS:GL:BD 0.11263736 0
1 227124236 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0046;AVGPOST=0.9985;RSQ=0.8744;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227124272 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0026;AVGPOST=0.9977;RSQ=0.6237;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227124368 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.937;BRSQ=0.863;LDAF=0.2586;AVGPOST=0.9694;RSQ=0.9407;ERATE=0.0015;THETA=0.0020;AC=566;AN=2184 GT:DS:GL:BD 0.25915751 0
1 227124511 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.958;BRSQ=0.745;LDAF=0.0911;AVGPOST=0.9733;RSQ=0.8789;ERATE=0.0012;THETA=0.0013;AC=196;AN=2184 GT:DS:GL:BD 0.08974359 0
1 227124534 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.944;BRSQ=0.368;LDAF=0.1038;AVGPOST=0.8702;RSQ=0.4566;ERATE=0.0116;THETA=0.0004;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 227124546 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.769;LDAF=0.0116;AVGPOST=0.9810;RSQ=0.3907;ERATE=0.0008;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227124550 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.892;LDAF=0.0183;AVGPOST=0.9973;RSQ=0.9368;ERATE=0.0005;THETA=0.0002;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 227124635 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.980;LDAF=0.0436;AVGPOST=0.9969;RSQ=0.9721;ERATE=0.0004;THETA=0.0011;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 227124639 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7082;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227124660 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.1662;AVGPOST=0.9986;RSQ=0.9959;ERATE=0.0003;THETA=0.0021;AC=363;AN=2184 GT:DS:GL:BD 0.16620879 0
1 227124836 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6461;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227124912 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9666;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227124933 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.892;LDAF=0.0127;AVGPOST=0.9967;RSQ=0.8949;ERATE=0.0006;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 227124956 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5345;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227125039 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0049;AVGPOST=0.9981;RSQ=0.8362;ERATE=0.0023;THETA=0.0013;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227125098 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1464;AVGPOST=0.9956;RSQ=0.9874;ERATE=0.0003;THETA=0.0034;AC=320;AN=2184 GT:DS:GL:BD 0.14652015 0
1 227125183 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.1505;AVGPOST=0.9973;RSQ=0.9916;ERATE=0.0003;THETA=0.0022;AC=327;AN=2184 GT:DS:GL:BD 0.14972527 0
1 227125260 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.881;LDAF=0.0119;AVGPOST=0.9972;RSQ=0.9174;ERATE=0.0002;THETA=0.0034;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227125262 . TCCC T 311 PASS INDEL;BAVGPOST=0.996;BRSQ=0.704;LDAF=0.0040;AVGPOST=0.9976;RSQ=0.7878;ERATE=0.0003;THETA=0.0064;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227125268 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0082;AVGPOST=0.9989;RSQ=0.9516;ERATE=0.0003;THETA=0.0030;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 227125454 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0070;AVGPOST=0.9996;RSQ=0.9760;ERATE=0.0002;THETA=0.0020;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 227125530 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8452;ERATE=0.0003;THETA=0.0017;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227125560 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9792;ERATE=0.0003;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227125589 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.896;LDAF=0.0066;AVGPOST=0.9986;RSQ=0.9223;ERATE=0.0004;THETA=0.0061;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 227125613 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5669;ERATE=0.0005;THETA=0.0063;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227125692 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0053;AVGPOST=0.9983;RSQ=0.8738;ERATE=0.0003;THETA=0.0174;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227125806 . TC T 812 PASS INDEL;BAVGPOST=0.999;BRSQ=0.796;LDAF=0.0049;AVGPOST=0.9960;RSQ=0.6594;ERATE=0.0003;THETA=0.0061;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227125914 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0052;AVGPOST=0.9995;RSQ=0.9517;ERATE=0.0003;THETA=0.0054;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227125990 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0096;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227125997 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.961;BRSQ=0.938;LDAF=0.5097;AVGPOST=0.9577;RSQ=0.9397;ERATE=0.0069;THETA=0.0261;AC=1109;AN=2184 GT:DS:GL:BD 0.50778389 1
1 227126114 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0058;AVGPOST=0.9975;RSQ=0.8659;ERATE=0.0003;THETA=0.0217;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227126126 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.547;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7311;ERATE=0.0003;THETA=0.0123;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227126261 rs35378438 AG A 2451 PASS INDEL;BAVGPOST=0.987;BRSQ=0.814;LDAF=0.0325;AVGPOST=0.9841;RSQ=0.8053;ERATE=0.0030;THETA=0.0045;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 227126286 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5035;ERATE=0.0004;THETA=0.0101;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227126323 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8500;ERATE=0.0005;THETA=0.0057;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227126476 . AAAAC A 176 PASS INDEL;BAVGPOST=0.999;BRSQ=0.759;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6700;ERATE=0.0004;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227126510 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0244;AVGPOST=0.9983;RSQ=0.9702;ERATE=0.0003;THETA=0.0016;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 227126667 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8894;ERATE=0.0003;THETA=0.0146;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227126678 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0097;AVGPOST=0.9989;RSQ=0.9516;ERATE=0.0004;THETA=0.0080;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 227126711 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0093;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227126714 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0079;AVGPOST=0.9994;RSQ=0.9646;ERATE=0.0003;THETA=0.0126;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227126859 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0101;AVGPOST=0.9984;RSQ=0.9413;ERATE=0.0003;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 227126886 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.602;LDAF=0.0047;AVGPOST=0.9963;RSQ=0.6655;ERATE=0.0007;THETA=0.0088;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227126953 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0031;AVGPOST=0.9983;RSQ=0.7756;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227126969 rs72129743 GTATTT G 4478 PASS INDEL;BAVGPOST=0.984;BRSQ=0.815;LDAF=0.0258;AVGPOST=0.9929;RSQ=0.8898;ERATE=0.0003;THETA=0.0023;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 227127008 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0100;AVGPOST=0.9993;RSQ=0.9686;ERATE=0.0003;THETA=0.0052;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 227127023 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4680;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227127203 . CGT C 45 PASS INDEL;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0030;AVGPOST=0.9974;RSQ=0.6357;ERATE=0.0006;THETA=0.0030;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227127343 . GTT G 12 PASS INDEL;BAVGPOST=0.999;BRSQ=0.541;LDAF=0.0022;AVGPOST=0.9966;RSQ=0.3302;ERATE=0.0006;THETA=0.0091;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227127414 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.730;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6351;ERATE=0.0003;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227127618 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.978;LDAF=0.5650;AVGPOST=0.9694;RSQ=0.9532;ERATE=0.0007;THETA=0.0003;AC=1228;AN=2184 GT:DS:GL:BD 0.56227106 1
1 227127659 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.693;LDAF=0.0050;AVGPOST=0.9942;RSQ=0.5950;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227127715 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.672;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7176;ERATE=0.0004;THETA=0.0021;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227127724 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4169;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227127790 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0032;AVGPOST=0.9984;RSQ=0.7808;ERATE=0.0005;THETA=0.0021;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227128108 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.848;LDAF=0.0239;AVGPOST=0.9785;RSQ=0.6701;ERATE=0.0007;THETA=0.0011;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 227128237 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0165;AVGPOST=0.9932;RSQ=0.8420;ERATE=0.0008;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 227128430 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7478;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227128545 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.805;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7059;ERATE=0.0003;THETA=0.0020;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227128686 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0002;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227128689 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6231;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227128757 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8614;ERATE=0.0003;THETA=0.0019;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227128789 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5224;ERATE=0.0002;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227128799 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0113;AVGPOST=0.9996;RSQ=0.9884;ERATE=0.0002;THETA=0.0049;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227128907 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.946;LDAF=0.0206;AVGPOST=0.9960;RSQ=0.9267;ERATE=0.0002;THETA=0.0005;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 227128982 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0115;AVGPOST=0.9995;RSQ=0.9806;ERATE=0.0003;THETA=0.0033;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227129081 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0114;AVGPOST=0.9996;RSQ=0.9875;ERATE=0.0002;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227129096 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0015;AVGPOST=0.9981;RSQ=0.5082;ERATE=0.0003;THETA=0.0025;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227129238 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0205;AVGPOST=0.9952;RSQ=0.9125;ERATE=0.0004;THETA=0.0008;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 227129249 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0386;AVGPOST=0.9973;RSQ=0.9743;ERATE=0.0003;THETA=0.0008;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 227129286 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8639;ERATE=0.0005;THETA=0.0011;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227129462 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227129563 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9858;ERATE=0.0002;THETA=0.0019;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227129569 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0002;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227129583 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.0993;AVGPOST=0.9967;RSQ=0.9870;ERATE=0.0003;THETA=0.0022;AC=218;AN=2184 GT:DS:GL:BD 0.09981685 0
1 227129680 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6213;ERATE=0.0003;THETA=0.0025;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227129720 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0225;AVGPOST=0.9981;RSQ=0.9608;ERATE=0.0003;THETA=0.0011;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 227129786 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0061;AVGPOST=0.9996;RSQ=0.9715;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227129790 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227129807 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0406;AVGPOST=0.9992;RSQ=0.9918;ERATE=0.0003;THETA=0.0008;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 227129900 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0020;AVGPOST=0.9993;RSQ=0.8748;ERATE=0.0003;THETA=0.0029;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227130010 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8757;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227130096 . ATG A 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0018;AVGPOST=0.9976;RSQ=0.5201;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227130195 . CTA C 6551 PASS INDEL;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0287;AVGPOST=0.9990;RSQ=0.9868;ERATE=0.0003;THETA=0.0008;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 227130245 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8057;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227130249 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0046;AVGPOST=0.9991;RSQ=0.9253;ERATE=0.0004;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227130359 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.5611;AVGPOST=0.9942;RSQ=0.9906;ERATE=0.0003;THETA=0.0003;AC=1227;AN=2184 GT:DS:GL:BD 0.56181318 1
1 227130843 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0035;AVGPOST=0.9987;RSQ=0.8730;ERATE=0.0002;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227131003 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8036;ERATE=0.0002;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227131194 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0115;AVGPOST=0.9999;RSQ=0.9964;ERATE=0.0002;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227131199 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.911;LDAF=0.0156;AVGPOST=0.9966;RSQ=0.9070;ERATE=0.0003;THETA=0.0006;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 227131453 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0114;AVGPOST=0.9998;RSQ=0.9912;ERATE=0.0002;THETA=0.0008;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227131463 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8399;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227131484 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7100;ERATE=0.0002;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227131578 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7150;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227131607 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227131724 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0227;AVGPOST=0.9994;RSQ=0.9907;ERATE=0.0003;THETA=0.0005;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 227131848 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7298;ERATE=0.0002;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227131871 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.849;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5470;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227131880 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0018;AVGPOST=0.9968;RSQ=0.3842;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227131941 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9247;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227132181 . TG T 5 PASS INDEL;BAVGPOST=0.999;BRSQ=0.624;LDAF=0.0016;AVGPOST=0.9976;RSQ=0.4217;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227132221 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7895;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227132294 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0002;THETA=0.0013;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227132479 rs72057449 TGAGA T 1266 PASS INDEL;BAVGPOST=0.991;BRSQ=0.797;LDAF=0.0202;AVGPOST=0.9891;RSQ=0.7892;ERATE=0.0004;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 227132513 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0307;AVGPOST=0.9980;RSQ=0.9761;ERATE=0.0005;THETA=0.0005;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 227132536 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227132791 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227132801 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0090;AVGPOST=0.9994;RSQ=0.9748;ERATE=0.0002;THETA=0.0012;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 227132821 . ACTCCAG A 83 PASS INDEL;BAVGPOST=1.000;BRSQ=0.782;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6018;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227132982 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5922;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227133011 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0114;AVGPOST=0.9999;RSQ=0.9946;ERATE=0.0002;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227133158 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5877;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227133230 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.914;LDAF=0.0123;AVGPOST=0.9980;RSQ=0.9315;ERATE=0.0003;THETA=0.0009;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 227133268 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4582;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227133276 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9335;ERATE=0.0002;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227133292 . C CT 1443 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0118;AVGPOST=0.9990;RSQ=0.9695;ERATE=0.0003;THETA=0.0009;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227133401 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0099;AVGPOST=0.9993;RSQ=0.9692;ERATE=0.0003;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 227133491 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0097;AVGPOST=0.9994;RSQ=0.9751;ERATE=0.0003;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 227133671 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.881;LDAF=0.0612;AVGPOST=0.9708;RSQ=0.8191;ERATE=0.0055;THETA=0.0008;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 227133817 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227133869 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.638;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6461;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227133911 . A AC 511 PASS INDEL;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7204;ERATE=0.0015;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227133992 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0115;AVGPOST=0.9998;RSQ=0.9912;ERATE=0.0003;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227133999 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227134039 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.1247;AVGPOST=0.9969;RSQ=0.9898;ERATE=0.0002;THETA=0.0004;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 227134132 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7772;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227134310 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.7971;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227134386 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0414;AVGPOST=0.9995;RSQ=0.9942;ERATE=0.0003;THETA=0.0007;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 227134461 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.936;LDAF=0.0179;AVGPOST=0.9978;RSQ=0.9488;ERATE=0.0004;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 227134585 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0106;AVGPOST=0.9986;RSQ=0.9492;ERATE=0.0003;THETA=0.0007;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 227134712 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0298;AVGPOST=0.9996;RSQ=0.9950;ERATE=0.0002;THETA=0.0014;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 227134770 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0017;AVGPOST=0.9995;RSQ=0.8772;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227134788 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8830;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227134923 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0114;AVGPOST=1.0000;RSQ=0.9982;ERATE=0.0002;THETA=0.0027;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227135058 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1268;AVGPOST=0.9985;RSQ=0.9952;ERATE=0.0002;THETA=0.0003;AC=277;AN=2184 GT:DS:GL:BD 0.12683150 0
1 227135176 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227135224 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8667;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227135254 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0116;AVGPOST=0.9994;RSQ=0.9775;ERATE=0.0003;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227135274 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0039;AVGPOST=0.9985;RSQ=0.8506;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227135414 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.655;LDAF=0.0028;AVGPOST=0.9987;RSQ=0.8042;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227135504 . AT A 14696 PASS INDEL;BAVGPOST=0.916;BRSQ=0.839;LDAF=0.3370;AVGPOST=0.9214;RSQ=0.8697;ERATE=0.0094;THETA=0.0004;AC=733;AN=2184 GT:DS:GL:BD 0.33562270 0
1 227135600 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6402;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227135637 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0114;AVGPOST=0.9998;RSQ=0.9912;ERATE=0.0002;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227135713 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0021;AVGPOST=0.9981;RSQ=0.6237;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227135715 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0047;AVGPOST=0.9996;RSQ=0.9598;ERATE=0.0002;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227135779 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9282;ERATE=0.0002;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227136021 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227136271 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0019;AVGPOST=0.9994;RSQ=0.8656;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227136287 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0036;AVGPOST=0.9990;RSQ=0.9229;ERATE=0.0003;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227136319 rs5781452 C CTGG 8986 PASS INDEL;BAVGPOST=0.998;BRSQ=0.976;LDAF=0.0300;AVGPOST=0.9995;RSQ=0.9924;ERATE=0.0003;THETA=0.0008;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 227136368 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9799;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227136540 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0074;AVGPOST=0.9989;RSQ=0.9334;ERATE=0.0002;THETA=0.0009;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 227136554 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8603;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227136640 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.1254;AVGPOST=0.9961;RSQ=0.9861;ERATE=0.0004;THETA=0.0007;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 227136672 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0412;AVGPOST=0.9998;RSQ=0.9975;ERATE=0.0003;THETA=0.0009;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 227136876 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0115;AVGPOST=0.9995;RSQ=0.9827;ERATE=0.0002;THETA=0.0013;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227136880 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4684;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227136930 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0114;AVGPOST=0.9998;RSQ=0.9912;ERATE=0.0002;THETA=0.0007;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227136949 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1253;AVGPOST=0.9985;RSQ=0.9946;ERATE=0.0003;THETA=0.0012;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 227136964 . TTA T 253 PASS INDEL;BAVGPOST=0.995;BRSQ=0.715;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8196;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227137032 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0165;AVGPOST=0.9993;RSQ=0.9818;ERATE=0.0002;THETA=0.0005;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 227137058 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0180;AVGPOST=0.9996;RSQ=0.9906;ERATE=0.0002;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 227137061 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8795;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227137256 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0164;AVGPOST=0.9988;RSQ=0.9690;ERATE=0.0003;THETA=0.0005;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 227137283 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0116;AVGPOST=0.9997;RSQ=0.9876;ERATE=0.0003;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227137289 . AAATAAACC A 471 PASS INDEL;BAVGPOST=0.999;BRSQ=0.783;LDAF=0.0037;AVGPOST=0.9965;RSQ=0.5961;ERATE=0.0016;THETA=0.0022;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227137539 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227137606 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227137722 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9420;ERATE=0.0002;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227137804 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0002;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227137902 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9799;ERATE=0.0002;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227138054 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.797;LDAF=0.0038;AVGPOST=0.9970;RSQ=0.7135;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227138106 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9721;ERATE=0.0002;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227138158 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0114;AVGPOST=0.9998;RSQ=0.9912;ERATE=0.0002;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227138202 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6039;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227138237 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7329;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227138290 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227138389 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0114;AVGPOST=0.9998;RSQ=0.9912;ERATE=0.0002;THETA=0.0010;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227138413 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0399;AVGPOST=0.9998;RSQ=0.9980;ERATE=0.0003;THETA=0.0004;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 227138588 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227138614 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.649;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.5886;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227138619 . CTA C 6184 PASS INDEL;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0295;AVGPOST=0.9975;RSQ=0.9684;ERATE=0.0003;THETA=0.0003;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 227138714 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.716;LDAF=0.0047;AVGPOST=0.9973;RSQ=0.7811;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227138718 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0409;AVGPOST=0.9992;RSQ=0.9917;ERATE=0.0004;THETA=0.0005;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 227138738 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.942;LDAF=0.8721;AVGPOST=0.9841;RSQ=0.9443;ERATE=0.0012;THETA=0.0008;AC=1908;AN=2184 GT:DS:GL:BD 0.87362635 1
1 227138804 . CTA C 57 PASS INDEL;BAVGPOST=0.998;BRSQ=0.598;LDAF=0.0064;AVGPOST=0.9945;RSQ=0.6833;ERATE=0.0008;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227138806 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0398;AVGPOST=0.9998;RSQ=0.9975;ERATE=0.0002;THETA=0.0003;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 227138891 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.5784;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227138978 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0284;AVGPOST=0.9998;RSQ=0.9974;ERATE=0.0002;THETA=0.0004;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 227138997 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0097;AVGPOST=0.9996;RSQ=0.9820;ERATE=0.0003;THETA=0.0047;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 227139010 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.6983;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227139022 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0088;AVGPOST=0.9995;RSQ=0.9776;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 227139143 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.5386;AVGPOST=0.9907;RSQ=0.9864;ERATE=0.0007;THETA=0.0003;AC=1176;AN=2184 GT:DS:GL:BD 0.53846157 1
1 227139178 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.991;LDAF=0.5406;AVGPOST=0.9911;RSQ=0.9867;ERATE=0.0006;THETA=0.0011;AC=1182;AN=2184 GT:DS:GL:BD 0.54120880 1
1 227139303 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0032;AVGPOST=0.9973;RSQ=0.6767;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227139307 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.933;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.9208;ERATE=0.0002;THETA=0.0069;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227139361 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.870;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.9044;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227139393 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0108;AVGPOST=0.9984;RSQ=0.9500;ERATE=0.0003;THETA=0.0026;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 227139533 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5587;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227139535 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0059;AVGPOST=0.9984;RSQ=0.9219;ERATE=0.0002;THETA=0.0010;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227139772 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.0393;AVGPOST=0.9990;RSQ=0.9902;ERATE=0.0003;THETA=0.0025;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 227139803 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227139815 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0052;AVGPOST=0.9988;RSQ=0.9183;ERATE=0.0003;THETA=0.0038;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227139870 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6784;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227140103 . AT A 5116 PASS INDEL;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0529;AVGPOST=0.9979;RSQ=0.9830;ERATE=0.0002;THETA=0.0006;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 227140219 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.621;LDAF=0.0305;AVGPOST=0.9665;RSQ=0.5703;ERATE=0.0084;THETA=0.0011;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 227140261 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.497;LDAF=0.0038;AVGPOST=0.9952;RSQ=0.5051;ERATE=0.0007;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227140272 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.972;LDAF=0.1279;AVGPOST=0.9915;RSQ=0.9717;ERATE=0.0004;THETA=0.0010;AC=280;AN=2184 GT:DS:GL:BD 0.12820514 0
1 227140486 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.803;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5706;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227140668 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.639;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5620;ERATE=0.0004;THETA=0.0088;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227140701 . CA C 743 PASS INDEL;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0073;AVGPOST=0.9987;RSQ=0.9220;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 227140703 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.977;LDAF=0.1331;AVGPOST=0.9909;RSQ=0.9716;ERATE=0.0006;THETA=0.0096;AC=288;AN=2184 GT:DS:GL:BD 0.13186814 0
1 227140878 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.902;LDAF=0.0067;AVGPOST=0.9980;RSQ=0.8833;ERATE=0.0004;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 227140879 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.883;LDAF=0.0069;AVGPOST=0.9977;RSQ=0.8646;ERATE=0.0003;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 227140956 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.455;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6171;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227141072 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0002;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227141106 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6347;ERATE=0.0003;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227141227 . CT C 104 PASS INDEL;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4660;ERATE=0.0005;THETA=0.0049;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227141229 . CT C 80 PASS INDEL;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5403;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227141293 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.784;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.6976;ERATE=0.0004;THETA=0.0065;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227141305 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0074;AVGPOST=0.9989;RSQ=0.9417;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 227141314 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0019;AVGPOST=0.9975;RSQ=0.5173;ERATE=0.0003;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227141338 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0114;AVGPOST=0.9991;RSQ=0.9735;ERATE=0.0003;THETA=0.0016;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227141469 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9342;ERATE=0.0003;THETA=0.0021;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227141493 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.7495;AVGPOST=0.9935;RSQ=0.9866;ERATE=0.0005;THETA=0.0017;AC=1637;AN=2184 GT:DS:GL:BD 0.74954212 1
1 227141519 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9994;RSQ=0.9194;ERATE=0.0003;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227141571 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0115;AVGPOST=0.9999;RSQ=0.9947;ERATE=0.0003;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227141600 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9792;ERATE=0.0002;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227141604 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0115;AVGPOST=0.9998;RSQ=0.9928;ERATE=0.0003;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227141636 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0115;AVGPOST=0.9999;RSQ=0.9946;ERATE=0.0003;THETA=0.0027;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227141695 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5408;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227141727 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227141886 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227141918 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0042;AVGPOST=0.9988;RSQ=0.8863;ERATE=0.0002;THETA=0.0015;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227141922 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7357;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227141932 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0240;AVGPOST=0.9993;RSQ=0.9896;ERATE=0.0002;THETA=0.0003;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 227141955 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.2683;AVGPOST=0.9961;RSQ=0.9918;ERATE=0.0005;THETA=0.0011;AC=586;AN=2184 GT:DS:GL:BD 0.26831502 0
1 227142045 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0066;AVGPOST=0.9985;RSQ=0.9059;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227142046 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0176;AVGPOST=0.9989;RSQ=0.9752;ERATE=0.0003;THETA=0.0005;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 227142220 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.834;LDAF=0.0058;AVGPOST=0.9983;RSQ=0.8836;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227142242 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9329;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227142254 . A AT 139 PASS INDEL;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6803;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227142265 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0115;AVGPOST=0.9998;RSQ=0.9929;ERATE=0.0003;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227142297 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.901;LDAF=0.0173;AVGPOST=0.9954;RSQ=0.9005;ERATE=0.0003;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 227142611 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=0.9997;RSQ=0.9603;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227142640 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0036;AVGPOST=0.9991;RSQ=0.8952;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227142699 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1264;AVGPOST=0.9976;RSQ=0.9906;ERATE=0.0003;THETA=0.0006;AC=276;AN=2184 GT:DS:GL:BD 0.12637363 0
1 227142835 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0115;AVGPOST=0.9999;RSQ=0.9964;ERATE=0.0002;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227142856 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0114;AVGPOST=1.0000;RSQ=0.9982;ERATE=0.0002;THETA=0.0008;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227142857 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8292;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227142928 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0134;AVGPOST=0.9996;RSQ=0.9874;ERATE=0.0003;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 227142954 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0002;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227143031 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5682;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227143124 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.903;LDAF=0.0248;AVGPOST=0.9965;RSQ=0.9497;ERATE=0.0005;THETA=0.0002;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 227143234 . ACT A 24 PASS INDEL;BAVGPOST=0.990;BRSQ=0.408;LDAF=0.0207;AVGPOST=0.9707;RSQ=0.4341;ERATE=0.0036;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 227143264 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.812;BRSQ=0.265;LDAF=0.2366;AVGPOST=0.7234;RSQ=0.3355;ERATE=0.0423;THETA=0.0006;AC=307;AN=2184 GT:DS:GL:BD 0.14056776 0
1 227143266 . A ACT 4762 PASS INDEL;BAVGPOST=0.697;BRSQ=0.221;LDAF=0.2912;AVGPOST=0.6989;RSQ=0.3662;ERATE=0.0350;THETA=0.0006;AC=407;AN=2184 GT:DS:GL:BD 0.18635531 0
1 227143272 . TG T 12346 PASS INDEL;BAVGPOST=0.993;BRSQ=0;LDAF=0.9707;AVGPOST=0.9602;RSQ=0.4449;ERATE=0.0016;THETA=0.0004;AC=2145;AN=2184 GT:DS:GL:BD 0.98214287 1
1 227143297 . A ACT 374 PASS INDEL;BAVGPOST=0.990;BRSQ=0.603;LDAF=0.0304;AVGPOST=0.9614;RSQ=0.4705;ERATE=0.0064;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 227143333 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0062;AVGPOST=0.9995;RSQ=0.9625;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227143386 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0062;AVGPOST=0.9991;RSQ=0.9364;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227143545 . ACT A 4808 PASS INDEL;BAVGPOST=0.863;BRSQ=0.583;LDAF=0.2144;AVGPOST=0.8384;RSQ=0.6340;ERATE=0.0164;THETA=0.0004;AC=406;AN=2184 GT:DS:GL:BD 0.18589744 0
1 227143670 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0053;AVGPOST=0.9979;RSQ=0.8647;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227143851 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6343;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227143876 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0036;AVGPOST=0.9979;RSQ=0.7691;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227143984 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.926;BRSQ=0.328;LDAF=0.9154;AVGPOST=0.8926;RSQ=0.4817;ERATE=0.0109;THETA=0.0007;AC=2069;AN=2184 GT:DS:GL:BD 0.94734430 1
1 227144707 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0247;AVGPOST=0.9980;RSQ=0.9730;ERATE=0.0004;THETA=0.0006;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 227144729 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0154;AVGPOST=0.9982;RSQ=0.9537;ERATE=0.0006;THETA=0.0014;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 227144760 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.955;LDAF=0.0245;AVGPOST=0.9985;RSQ=0.9748;ERATE=0.0005;THETA=0.0007;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 227144822 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.723;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.8956;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227144859 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8134;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227144893 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0251;AVGPOST=0.9973;RSQ=0.9617;ERATE=0.0005;THETA=0.0005;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 227144914 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0080;AVGPOST=0.9986;RSQ=0.9296;ERATE=0.0002;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 227144963 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0045;AVGPOST=0.9992;RSQ=0.9139;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227144981 . T TG 406 PASS INDEL;BAVGPOST=0.998;BRSQ=0.909;LDAF=0.0145;AVGPOST=0.9914;RSQ=0.7585;ERATE=0.0010;THETA=0.0008;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 227145087 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0118;AVGPOST=0.9992;RSQ=0.9743;ERATE=0.0003;THETA=0.0009;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227145103 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.865;LDAF=0.0099;AVGPOST=0.9977;RSQ=0.9147;ERATE=0.0003;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 227145142 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5611;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227145193 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7059;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227145240 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1064;AVGPOST=0.9985;RSQ=0.9934;ERATE=0.0002;THETA=0.0004;AC=231;AN=2184 GT:DS:GL:BD 0.10576923 0
1 227145287 rs57102402 A AGG 1366 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0083;AVGPOST=0.9980;RSQ=0.8921;ERATE=0.0006;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 227145379 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.895;LDAF=0.0173;AVGPOST=0.9959;RSQ=0.9155;ERATE=0.0002;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 227145475 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0120;AVGPOST=0.9989;RSQ=0.9649;ERATE=0.0003;THETA=0.0022;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227145478 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5890;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227145608 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6952;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227145689 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.776;LDAF=0.0022;AVGPOST=0.9978;RSQ=0.5480;ERATE=0.0006;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227145784 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0248;AVGPOST=0.9992;RSQ=0.9867;ERATE=0.0003;THETA=0.0007;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 227145800 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0064;AVGPOST=0.9986;RSQ=0.9254;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227145801 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9302;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227145827 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.896;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227145836 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227145920 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6830;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227146119 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.873;LDAF=0.0146;AVGPOST=0.9954;RSQ=0.8765;ERATE=0.0003;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 227146134 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.983;LDAF=0.2671;AVGPOST=0.9965;RSQ=0.9929;ERATE=0.0004;THETA=0.0003;AC=583;AN=2184 GT:DS:GL:BD 0.26694140 0
1 227146170 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.695;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5521;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227146221 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6846;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227146433 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.947;LDAF=0.2523;AVGPOST=0.9891;RSQ=0.9784;ERATE=0.0005;THETA=0.0004;AC=550;AN=2184 GT:DS:GL:BD 0.25183150 0
1 227146461 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0428;AVGPOST=0.9991;RSQ=0.9922;ERATE=0.0003;THETA=0.0031;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 227146519 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.737;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.7366;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227146649 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9908;ERATE=0.0002;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 227146661 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0056;AVGPOST=0.9995;RSQ=0.9618;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227146768 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0115;AVGPOST=0.9998;RSQ=0.9913;ERATE=0.0002;THETA=0.0014;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227146930 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0037;AVGPOST=0.9984;RSQ=0.8519;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227146931 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8973;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227146977 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6616;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227147024 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227147298 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8380;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227147315 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.7866;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227147317 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9490;ERATE=0.0002;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227147537 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6620;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227147544 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0024;AVGPOST=0.9992;RSQ=0.8850;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227148317 . ATGG A 702 PASS INDEL;BAVGPOST=0.961;BRSQ=0.429;LDAF=0.0842;AVGPOST=0.8838;RSQ=0.4063;ERATE=0.0151;THETA=0.0002;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 227148405 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0241;AVGPOST=0.9994;RSQ=0.9908;ERATE=0.0002;THETA=0.0012;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 227148537 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0283;AVGPOST=0.9992;RSQ=0.9879;ERATE=0.0003;THETA=0.0005;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 227148558 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9995;RSQ=0.9694;ERATE=0.0003;THETA=0.0009;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 227148562 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0116;AVGPOST=0.9997;RSQ=0.9878;ERATE=0.0003;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227148586 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.644;LDAF=0.0021;AVGPOST=0.9974;RSQ=0.5493;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227148618 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6697;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227148675 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0152;AVGPOST=0.9995;RSQ=0.9877;ERATE=0.0003;THETA=0.0002;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 227148702 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0422;AVGPOST=0.9996;RSQ=0.9960;ERATE=0.0003;THETA=0.0003;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 227148707 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0115;AVGPOST=0.9998;RSQ=0.9911;ERATE=0.0002;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227148866 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6853;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227148910 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227148952 . GA G 78 PASS INDEL;BAVGPOST=1.000;BRSQ=0.693;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4334;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227148980 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227148988 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9801;ERATE=0.0002;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227149087 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0002;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 227149148 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227149149 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0053;AVGPOST=0.9994;RSQ=0.9585;ERATE=0.0002;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227149153 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227149164 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227149203 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1065;AVGPOST=0.9998;RSQ=0.9989;ERATE=0.0002;THETA=0.0006;AC=231;AN=2184 GT:DS:GL:BD 0.10576923 0
1 227149223 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9709;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227149257 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227149273 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227149439 . C CTGTGTG 3725 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0118;AVGPOST=0.9992;RSQ=0.9723;ERATE=0.0003;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227149559 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0019;AVGPOST=0.9983;RSQ=0.6881;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227149601 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7756;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227149640 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6259;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227149840 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0116;AVGPOST=0.9996;RSQ=0.9858;ERATE=0.0003;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227149896 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0030;AVGPOST=0.9984;RSQ=0.8003;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227149921 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.9289;AVGPOST=0.9985;RSQ=0.9902;ERATE=0.0003;THETA=0.0005;AC=2029;AN=2184 GT:DS:GL:BD 0.92902929 1
1 227150055 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0002;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227150081 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227150100 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8725;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227150127 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9470;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227150192 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227150215 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.8915;AVGPOST=0.9985;RSQ=0.9928;ERATE=0.0003;THETA=0.0005;AC=1947;AN=2184 GT:DS:GL:BD 0.89148355 1
1 227150216 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0029;AVGPOST=0.9967;RSQ=0.6679;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227150218 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227150266 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2978;AVGPOST=0.9978;RSQ=0.9955;ERATE=0.0003;THETA=0.0003;AC=651;AN=2184 GT:DS:GL:BD 0.29807693 0
1 227150691 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0115;AVGPOST=0.9997;RSQ=0.9893;ERATE=0.0003;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227150698 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.960;LDAF=0.0423;AVGPOST=0.9985;RSQ=0.9866;ERATE=0.0006;THETA=0.0004;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 227150708 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6237;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227150803 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0028;AVGPOST=0.9996;RSQ=0.9382;ERATE=0.0003;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227150844 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5181;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227150864 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.836;LDAF=0.0054;AVGPOST=0.9983;RSQ=0.8855;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227151023 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5926;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227151125 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0154;AVGPOST=0.9993;RSQ=0.9820;ERATE=0.0003;THETA=0.0002;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 227151137 . AC A 7771 PASS INDEL;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.1330;AVGPOST=0.9931;RSQ=0.9777;ERATE=0.0007;THETA=0.0002;AC=291;AN=2184 GT:DS:GL:BD 0.13324176 0
1 227151144 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.2992;AVGPOST=0.9947;RSQ=0.9899;ERATE=0.0005;THETA=0.0005;AC=654;AN=2184 GT:DS:GL:BD 0.29945055 0
1 227151261 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.8912;AVGPOST=0.9984;RSQ=0.9932;ERATE=0.0003;THETA=0.0004;AC=1947;AN=2184 GT:DS:GL:BD 0.89148355 1
1 227151420 . CT C 9720 PASS INDEL;BAVGPOST=0.984;BRSQ=0.310;LDAF=0.9749;AVGPOST=0.9622;RSQ=0.3960;ERATE=0.0036;THETA=0.0002;AC=2158;AN=2184 GT:DS:GL:BD 0.98809522 1
1 227151462 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.660;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.3622;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227151503 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.898;LDAF=0.0117;AVGPOST=0.9994;RSQ=0.9782;ERATE=0.0003;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227151518 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0028;AVGPOST=0.9981;RSQ=0.7077;ERATE=0.0005;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227151595 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8483;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227151862 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0136;AVGPOST=0.9993;RSQ=0.9752;ERATE=0.0003;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 227151904 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0115;AVGPOST=0.9998;RSQ=0.9929;ERATE=0.0002;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227151953 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227151956 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227152317 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9249;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227152342 . CT C 29374 PASS INDEL;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.2735;AVGPOST=0.9949;RSQ=0.9895;ERATE=0.0005;THETA=0.0005;AC=595;AN=2184 GT:DS:GL:BD 0.27243590 0
1 227152367 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227152384 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0114;AVGPOST=1.0000;RSQ=0.9982;ERATE=0.0002;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227152392 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1244;AVGPOST=0.9977;RSQ=0.9917;ERATE=0.0004;THETA=0.0004;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 227152546 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.800;LDAF=0.0044;AVGPOST=0.9988;RSQ=0.8874;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227152555 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9058;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227152602 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9882;ERATE=0.0002;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227152655 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227152693 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227152754 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0002;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 227152761 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0114;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227152763 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227152764 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227152778 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0393;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 227152781 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227152782 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227152814 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227152815 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227152821 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227152907 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9499;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227152925 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227153044 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227153048 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227153110 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227153196 . TG T 97 PASS INDEL;BAVGPOST=1.000;BRSQ=0.703;LDAF=0.0017;AVGPOST=0.9976;RSQ=0.4097;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227153242 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0050;AVGPOST=1.0000;RSQ=0.9963;ERATE=0.0002;THETA=0.0016;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227153261 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8665;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227153274 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0114;AVGPOST=1.0000;RSQ=0.9982;ERATE=0.0002;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227153336 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0002;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 227153354 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227153359 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227153384 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227153394 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227153401 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227153447 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=1.0000;RSQ=0.9941;ERATE=0.0002;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227153538 . GC G 130 PASS INDEL;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0031;AVGPOST=0.9989;RSQ=0.8289;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227153653 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0069;AVGPOST=0.9996;RSQ=0.9731;ERATE=0.0002;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 227153696 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0393;AVGPOST=0.9999;RSQ=0.9984;ERATE=0.0002;THETA=0.0009;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 227153771 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0027;AVGPOST=0.9997;RSQ=0.9558;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227153844 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.804;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8132;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227153858 . CT C 171 PASS INDEL;BAVGPOST=0.889;BRSQ=0.367;LDAF=0.1188;AVGPOST=0.8763;RSQ=0.5555;ERATE=0.0046;THETA=0.0002;AC=201;AN=2184 GT:DS:GL:BD 0.09203297 0
1 227153861 rs71772324 TC T 8453 PASS INDEL;BAVGPOST=0.991;BRSQ=0.970;LDAF=0.1657;AVGPOST=0.9954;RSQ=0.9856;ERATE=0.0008;THETA=0.0002;AC=364;AN=2184 GT:DS:GL:BD 0.16666667 0
1 227153930 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2963;AVGPOST=0.9983;RSQ=0.9967;ERATE=0.0004;THETA=0.0003;AC=649;AN=2184 GT:DS:GL:BD 0.29716116 0
1 227153986 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7497;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227154016 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5446;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227154062 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.938;LDAF=0.0133;AVGPOST=0.9993;RSQ=0.9754;ERATE=0.0003;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 227154233 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2965;AVGPOST=0.9987;RSQ=0.9974;ERATE=0.0002;THETA=0.0006;AC=649;AN=2184 GT:DS:GL:BD 0.29716116 0
1 227154329 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5918;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227154330 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9996;RSQ=0.9533;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227154331 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9895;ERATE=0.0002;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227154354 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9561;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227154386 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227154430 . TC T 143 PASS INDEL;BAVGPOST=0.999;BRSQ=0.715;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7246;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227154447 . TC T 3868 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0352;AVGPOST=0.9980;RSQ=0.9778;ERATE=0.0003;THETA=0.0013;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 227154452 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6464;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227154491 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0119;AVGPOST=0.9991;RSQ=0.9747;ERATE=0.0003;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227154516 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.798;LDAF=0.0023;AVGPOST=0.9995;RSQ=0.8976;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227154521 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6406;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227154563 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8538;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227154569 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8710;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227154656 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9767;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227154657 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.799;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4978;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227154815 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1045;AVGPOST=0.9986;RSQ=0.9937;ERATE=0.0003;THETA=0.0002;AC=227;AN=2184 GT:DS:GL:BD 0.10393773 0
1 227154856 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0117;AVGPOST=0.9993;RSQ=0.9732;ERATE=0.0003;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227154899 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8105;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227154928 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0394;AVGPOST=0.9998;RSQ=0.9979;ERATE=0.0002;THETA=0.0004;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 227154972 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8894;ERATE=0.0002;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227155003 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0072;AVGPOST=0.9998;RSQ=0.9867;ERATE=0.0002;THETA=0.0001;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 227155181 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0115;AVGPOST=0.9998;RSQ=0.9931;ERATE=0.0002;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227155481 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0116;AVGPOST=0.9995;RSQ=0.9831;ERATE=0.0003;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227155511 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5195;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227155512 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0037;AVGPOST=0.9995;RSQ=0.9447;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227155635 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.837;LDAF=0.0046;AVGPOST=0.9986;RSQ=0.8792;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227155644 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.696;LDAF=0.0261;AVGPOST=0.9773;RSQ=0.6700;ERATE=0.0083;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 227155705 . GTTATGACCC G 747 PASS INDEL;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9654;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227155716 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0060;AVGPOST=0.9994;RSQ=0.9540;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227155771 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5775;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227155772 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.763;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.8034;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227155775 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9303;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227155790 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5921;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227155910 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0417;AVGPOST=0.9986;RSQ=0.9864;ERATE=0.0003;THETA=0.0002;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 227155983 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.982;LDAF=0.2691;AVGPOST=0.9945;RSQ=0.9882;ERATE=0.0004;THETA=0.0006;AC=587;AN=2184 GT:DS:GL:BD 0.26877290 0
1 227155992 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.619;LDAF=0.0110;AVGPOST=0.9876;RSQ=0.5621;ERATE=0.0032;THETA=0.0011;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 227156021 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6288;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227156072 . A AC 20 PASS INDEL;BAVGPOST=1.000;BRSQ=0.773;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227156174 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227156234 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6589;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227156264 . C CT 1773 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0128;AVGPOST=0.9989;RSQ=0.9668;ERATE=0.0004;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 227156335 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0116;AVGPOST=0.9997;RSQ=0.9879;ERATE=0.0002;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227156494 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227156620 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.962;LDAF=0.1111;AVGPOST=0.9885;RSQ=0.9600;ERATE=0.0003;THETA=0.0005;AC=244;AN=2184 GT:DS:GL:BD 0.11172161 0
1 227156621 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.968;LDAF=0.1111;AVGPOST=0.9875;RSQ=0.9570;ERATE=0.0003;THETA=0.0003;AC=243;AN=2184 GT:DS:GL:BD 0.11126374 0
1 227156625 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6200;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227156643 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0233;AVGPOST=0.9997;RSQ=0.9951;ERATE=0.0002;THETA=0.0002;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 227156672 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.845;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9818;ERATE=0.0002;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227156673 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227156891 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0122;AVGPOST=0.9989;RSQ=0.9581;ERATE=0.0003;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 227156940 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6006;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227156994 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.877;LDAF=0.0106;AVGPOST=0.9963;RSQ=0.8723;ERATE=0.0005;THETA=0.0008;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 227157039 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.952;LDAF=0.0277;AVGPOST=0.9994;RSQ=0.9902;ERATE=0.0002;THETA=0.0004;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 227157043 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.723;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.6170;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227157124 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0072;AVGPOST=0.9963;RSQ=0.7897;ERATE=0.0006;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227157173 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.870;LDAF=0.0123;AVGPOST=0.9959;RSQ=0.8838;ERATE=0.0003;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 227157279 . C CG 23 PASS INDEL;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.7924;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227157294 . C CCT 37 PASS INDEL;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5611;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227157360 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0115;AVGPOST=0.9997;RSQ=0.9893;ERATE=0.0002;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227157380 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0394;AVGPOST=0.9994;RSQ=0.9928;ERATE=0.0003;THETA=0.0004;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 227157400 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9599;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227157445 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5776;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227157447 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.710;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6447;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227157578 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.911;LDAF=0.0092;AVGPOST=0.9986;RSQ=0.9401;ERATE=0.0003;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 227157608 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1548;AVGPOST=0.9976;RSQ=0.9920;ERATE=0.0004;THETA=0.0008;AC=338;AN=2184 GT:DS:GL:BD 0.15476191 0
1 227157675 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0005;AVGPOST=0.9991;RSQ=0.1841;ERATE=0.0003;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 227157677 . C CT 74 PASS INDEL;BAVGPOST=0.982;BRSQ=0.539;LDAF=0.0356;AVGPOST=0.9584;RSQ=0.5099;ERATE=0.0108;THETA=0.0003;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 227157736 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1271;AVGPOST=0.9974;RSQ=0.9905;ERATE=0.0003;THETA=0.0003;AC=278;AN=2184 GT:DS:GL:BD 0.12728938 0
1 227157805 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.8909;AVGPOST=0.9969;RSQ=0.9860;ERATE=0.0004;THETA=0.0004;AC=1948;AN=2184 GT:DS:GL:BD 0.89194137 1
1 227157815 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.660;LDAF=0.0045;AVGPOST=0.9978;RSQ=0.7936;ERATE=0.0007;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227157869 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.883;LDAF=0.0465;AVGPOST=0.9835;RSQ=0.8704;ERATE=0.0021;THETA=0.0004;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 227157937 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227157942 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.930;LDAF=0.0278;AVGPOST=0.9968;RSQ=0.9549;ERATE=0.0003;THETA=0.0004;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 227157944 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1269;AVGPOST=0.9962;RSQ=0.9875;ERATE=0.0004;THETA=0.0007;AC=277;AN=2184 GT:DS:GL:BD 0.12683150 0
1 227157949 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6237;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227158023 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0243;AVGPOST=0.9998;RSQ=0.9960;ERATE=0.0002;THETA=0.0003;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 227158106 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9624;ERATE=0.0003;THETA=0.0012;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227158126 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0081;AVGPOST=0.9982;RSQ=0.9256;ERATE=0.0003;THETA=0.0008;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 227158161 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.740;LDAF=0.0025;AVGPOST=0.9994;RSQ=0.8889;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227158192 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227158215 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6451;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227158217 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8043;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227158266 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7924;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227158354 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9249;ERATE=0.0002;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227158483 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0278;AVGPOST=0.9996;RSQ=0.9947;ERATE=0.0002;THETA=0.0003;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 227158512 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0017;AVGPOST=0.9979;RSQ=0.5590;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227158524 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0019;AVGPOST=0.9983;RSQ=0.6239;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227158562 . T TC 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0018;AVGPOST=0.9976;RSQ=0.5319;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227158600 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.968;LDAF=0.0269;AVGPOST=0.9959;RSQ=0.9525;ERATE=0.0002;THETA=0.0004;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 227158604 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5107;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227158612 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7986;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227158703 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.457;LDAF=0.0048;AVGPOST=0.9931;RSQ=0.3993;ERATE=0.0010;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227158734 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.554;LDAF=0.0100;AVGPOST=0.9949;RSQ=0.7827;ERATE=0.0007;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 227158807 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.883;LDAF=0.0116;AVGPOST=0.9990;RSQ=0.9640;ERATE=0.0004;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227158910 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.1435;AVGPOST=0.9944;RSQ=0.9806;ERATE=0.0006;THETA=0.0004;AC=312;AN=2184 GT:DS:GL:BD 0.14285715 0
1 227158932 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0138;AVGPOST=0.9965;RSQ=0.9047;ERATE=0.0004;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 227158981 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.909;LDAF=0.0313;AVGPOST=0.9887;RSQ=0.8687;ERATE=0.0017;THETA=0.0009;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 227158982 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.519;LDAF=0.0130;AVGPOST=0.9842;RSQ=0.5281;ERATE=0.0034;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 227159054 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0079;AVGPOST=0.9988;RSQ=0.9287;ERATE=0.0003;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 227159081 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.924;LDAF=0.0426;AVGPOST=0.9955;RSQ=0.9636;ERATE=0.0007;THETA=0.0007;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 227159140 . CT C 53 PASS INDEL;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0033;AVGPOST=0.9959;RSQ=0.5449;ERATE=0.0005;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227159209 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0043;AVGPOST=0.9985;RSQ=0.8417;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227159245 . C CA 105 PASS INDEL;BAVGPOST=0.988;BRSQ=0.427;LDAF=0.0155;AVGPOST=0.9934;RSQ=0.8311;ERATE=0.0008;THETA=0.0001;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 227159257 . G GA 407 PASS INDEL;BAVGPOST=0.985;BRSQ=0.620;LDAF=0.0197;AVGPOST=0.9880;RSQ=0.7689;ERATE=0.0014;THETA=0.0004;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 227159294 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0023;AVGPOST=0.9973;RSQ=0.5611;ERATE=0.0008;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227159476 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227159568 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227159876 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.783;LDAF=0.0052;AVGPOST=0.9984;RSQ=0.8824;ERATE=0.0002;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227159931 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9830;ERATE=0.0002;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227159968 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.783;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.8242;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227160166 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9721;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227160333 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9473;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227160506 . G GCAT 40027 PASS INDEL;BAVGPOST=0.947;BRSQ=0.813;LDAF=0.8119;AVGPOST=0.9166;RSQ=0.7884;ERATE=0.0383;THETA=0.0003;AC=1819;AN=2184 GT:DS:GL:BD 0.83287543 1
1 227160654 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0049;AVGPOST=0.9991;RSQ=0.9281;ERATE=0.0009;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227160861 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0075;AVGPOST=0.9997;RSQ=0.9803;ERATE=0.0002;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 227160882 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1040;AVGPOST=0.9972;RSQ=0.9888;ERATE=0.0003;THETA=0.0005;AC=225;AN=2184 GT:DS:GL:BD 0.10302198 0
1 227160883 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9133;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227160953 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0044;AVGPOST=0.9985;RSQ=0.8811;ERATE=0.0003;THETA=0.0013;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227161138 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.778;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6946;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227161190 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0079;AVGPOST=0.9989;RSQ=0.9362;ERATE=0.0004;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 227161255 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0327;AVGPOST=0.9989;RSQ=0.9879;ERATE=0.0003;THETA=0.0003;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 227161284 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0026;AVGPOST=0.9979;RSQ=0.6586;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227161307 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0127;AVGPOST=0.9975;RSQ=0.9230;ERATE=0.0005;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 227161461 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5120;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227161618 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0004;AVGPOST=0.9995;RSQ=0.5143;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227161876 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.901;LDAF=0.0114;AVGPOST=0.9995;RSQ=0.9822;ERATE=0.0003;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227162056 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0038;AVGPOST=0.9994;RSQ=0.9235;ERATE=0.0003;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227162212 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1268;AVGPOST=0.9939;RSQ=0.9810;ERATE=0.0004;THETA=0.0004;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 227162271 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0115;AVGPOST=0.9995;RSQ=0.9807;ERATE=0.0003;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227162310 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0251;AVGPOST=0.9995;RSQ=0.9911;ERATE=0.0003;THETA=0.0006;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 227162447 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7859;ERATE=0.0003;THETA=0.0029;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227162524 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1556;AVGPOST=0.9944;RSQ=0.9819;ERATE=0.0004;THETA=0.0025;AC=338;AN=2184 GT:DS:GL:BD 0.15476191 0
1 227162591 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227162636 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5398;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227162686 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6309;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227162695 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9484;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227162930 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9365;ERATE=0.0002;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227162976 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.8941;AVGPOST=0.9978;RSQ=0.9907;ERATE=0.0003;THETA=0.0003;AC=1953;AN=2184 GT:DS:GL:BD 0.89423078 1
1 227163038 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.722;LDAF=0.0057;AVGPOST=0.9977;RSQ=0.8152;ERATE=0.0006;THETA=0.0010;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227163068 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.701;LDAF=0.0027;AVGPOST=0.9961;RSQ=0.4629;ERATE=0.0006;THETA=0.0027;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227163101 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0117;AVGPOST=0.9994;RSQ=0.9773;ERATE=0.0004;THETA=0.0013;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227163541 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5754;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227163687 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9822;ERATE=0.0002;THETA=0.0014;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227163717 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.988;LDAF=0.8938;AVGPOST=0.9979;RSQ=0.9902;ERATE=0.0004;THETA=0.0005;AC=1952;AN=2184 GT:DS:GL:BD 0.89377290 1
1 227163757 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0226;AVGPOST=0.9981;RSQ=0.9619;ERATE=0.0004;THETA=0.0004;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 227163828 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.896;BRSQ=0.406;LDAF=0.1518;AVGPOST=0.8229;RSQ=0.4284;ERATE=0.0286;THETA=0.0030;AC=198;AN=2184 GT:DS:GL:BD 0.09065934 0
1 227163920 rs71179185 G GA 309 PASS INDEL;BAVGPOST=0.780;BRSQ=0.130;LDAF=0.2452;AVGPOST=0.6827;RSQ=0.2780;ERATE=0.0311;THETA=0.0005;AC=285;AN=2184 GT:DS:GL:BD 0.13049451 0
1 227163981 rs11276816 A ACTGCG 234 PASS INDEL;BAVGPOST=0.985;BRSQ=0.443;LDAF=0.0396;AVGPOST=0.9522;RSQ=0.5184;ERATE=0.0040;THETA=0.0005;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 227164005 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.896;LDAF=0.1140;AVGPOST=0.9772;RSQ=0.9157;ERATE=0.0009;THETA=0.0021;AC=250;AN=2184 GT:DS:GL:BD 0.11446887 0
1 227164013 . GATGTTGCC G 28 PASS INDEL;BAVGPOST=0.982;BRSQ=0.087;LDAF=0.0747;AVGPOST=0.8954;RSQ=0.4328;ERATE=0.0028;THETA=0.0006;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 227164022 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.929;BRSQ=0.353;LDAF=0.1097;AVGPOST=0.8508;RSQ=0.3834;ERATE=0.0194;THETA=0.0018;AC=114;AN=2184 GT:DS:GL:BD 0.05219780 0
1 227164112 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0130;AVGPOST=0.9925;RSQ=0.7592;ERATE=0.0006;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 227164158 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.548;LDAF=0.0049;AVGPOST=0.9939;RSQ=0.4963;ERATE=0.0008;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227164340 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.578;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5104;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227164394 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.754;LDAF=0.0024;AVGPOST=0.9981;RSQ=0.7101;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227164466 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6840;ERATE=0.0003;THETA=0.0058;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227164480 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0033;AVGPOST=0.9982;RSQ=0.8089;ERATE=0.0002;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227164592 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0051;AVGPOST=0.9985;RSQ=0.8838;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227164595 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0037;AVGPOST=0.9996;RSQ=0.9478;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227164710 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6259;ERATE=0.0004;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227164716 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.8918;AVGPOST=0.9983;RSQ=0.9918;ERATE=0.0004;THETA=0.0017;AC=1948;AN=2184 GT:DS:GL:BD 0.89194137 1
1 227164873 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6068;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227165008 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227165042 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.779;LDAF=0.0021;AVGPOST=0.9981;RSQ=0.6517;ERATE=0.0006;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227165097 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2689;AVGPOST=0.9910;RSQ=0.9820;ERATE=0.0004;THETA=0.0034;AC=587;AN=2184 GT:DS:GL:BD 0.26877290 0
1 227165114 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0114;AVGPOST=1.0000;RSQ=0.9982;ERATE=0.0002;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227165173 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6782;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227165265 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7217;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227165285 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0016;AVGPOST=0.9976;RSQ=0.4538;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227165328 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.762;LDAF=0.0031;AVGPOST=0.9988;RSQ=0.8275;ERATE=0.0004;THETA=0.0026;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227165348 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0115;AVGPOST=0.9998;RSQ=0.9928;ERATE=0.0003;THETA=0.0015;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227165433 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.785;LDAF=0.0032;AVGPOST=0.9985;RSQ=0.8179;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227165484 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.8836;AVGPOST=0.9966;RSQ=0.9866;ERATE=0.0003;THETA=0.0006;AC=1930;AN=2184 GT:DS:GL:BD 0.88369966 1
1 227165505 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0148;AVGPOST=0.9993;RSQ=0.9801;ERATE=0.0003;THETA=0.0022;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 227165514 . TACAC T 372 PASS INDEL;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0020;AVGPOST=0.9970;RSQ=0.3941;ERATE=0.0006;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227165599 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0116;AVGPOST=0.9996;RSQ=0.9843;ERATE=0.0003;THETA=0.0011;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227165611 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0228;AVGPOST=0.9989;RSQ=0.9806;ERATE=0.0003;THETA=0.0009;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 227165650 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0116;AVGPOST=0.9996;RSQ=0.9877;ERATE=0.0003;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227165722 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227165753 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0003;THETA=0.0059;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227165806 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0087;AVGPOST=0.9998;RSQ=0.9899;ERATE=0.0002;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 227165808 . TCA T 13 PASS INDEL;BAVGPOST=0.999;BRSQ=0.757;LDAF=0.0029;AVGPOST=0.9973;RSQ=0.6574;ERATE=0.0004;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227165816 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8781;ERATE=0.0002;THETA=0.0038;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227165843 . CAT C 117 PASS INDEL;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7608;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227165890 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8325;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227165935 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.690;LDAF=0.0029;AVGPOST=0.9986;RSQ=0.8388;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227165936 . CCA C 24 PASS INDEL;BAVGPOST=0.991;BRSQ=0.187;LDAF=0.0432;AVGPOST=0.9344;RSQ=0.4036;ERATE=0.0017;THETA=0.0012;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 227165961 . C CCA 59 PASS INDEL;BAVGPOST=0.992;BRSQ=0.495;LDAF=0.0124;AVGPOST=0.9842;RSQ=0.5024;ERATE=0.0016;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227166011 . AC A 45 PASS INDEL;BAVGPOST=1.000;BRSQ=0.782;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.3670;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227166042 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0102;AVGPOST=0.9998;RSQ=0.9902;ERATE=0.0002;THETA=0.0025;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 227166045 . ACCCT A 413 PASS INDEL;BAVGPOST=0.997;BRSQ=0.790;LDAF=0.0078;AVGPOST=0.9961;RSQ=0.7970;ERATE=0.0006;THETA=0.0011;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 227166102 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.932;LDAF=0.1151;AVGPOST=0.9745;RSQ=0.9032;ERATE=0.0080;THETA=0.0008;AC=237;AN=2184 GT:DS:GL:BD 0.10851648 0
1 227166145 . ACCT A 254 PASS INDEL;BAVGPOST=0.998;BRSQ=0.818;LDAF=0.0064;AVGPOST=0.9951;RSQ=0.7035;ERATE=0.0005;THETA=0.0010;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227166162 . C CTA 157 PASS INDEL;BAVGPOST=0.997;BRSQ=0.761;LDAF=0.0095;AVGPOST=0.9916;RSQ=0.6497;ERATE=0.0028;THETA=0.0034;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227166186 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0049;AVGPOST=0.9992;RSQ=0.9350;ERATE=0.0002;THETA=0.0021;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227166202 . CCA C 9 PASS INDEL;BAVGPOST=0.999;BRSQ=0.762;LDAF=0.0016;AVGPOST=0.9981;RSQ=0.5358;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227166233 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5013;ERATE=0.0002;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227166263 . AGC A 1799 PASS INDEL;BAVGPOST=0.899;BRSQ=0.590;LDAF=0.1438;AVGPOST=0.8864;RSQ=0.7015;ERATE=0.0068;THETA=0.0010;AC=262;AN=2184 GT:DS:GL:BD 0.11996337 0
1 227166292 . ACACT A 340 PASS INDEL;BAVGPOST=0.995;BRSQ=0.609;LDAF=0.0098;AVGPOST=0.9895;RSQ=0.5496;ERATE=0.0015;THETA=0.0022;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 227166316 . CCA C 42 PASS INDEL;BAVGPOST=0.999;BRSQ=0.738;LDAF=0.0021;AVGPOST=0.9977;RSQ=0.4769;ERATE=0.0004;THETA=0.0025;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227166318 . A ACCT 227 PASS INDEL;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0059;AVGPOST=0.9960;RSQ=0.7086;ERATE=0.0007;THETA=0.0066;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227166325 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.938;BRSQ=0.381;LDAF=0.0570;AVGPOST=0.9454;RSQ=0.6487;ERATE=0.0006;THETA=0.0010;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 227166340 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.927;BRSQ=0.350;LDAF=0.0755;AVGPOST=0.9159;RSQ=0.5717;ERATE=0.0086;THETA=0.0008;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 227166349 . T TACAC 388 PASS INDEL;BAVGPOST=0.976;BRSQ=0.384;LDAF=0.0414;AVGPOST=0.9470;RSQ=0.4751;ERATE=0.0063;THETA=0.0065;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 227166361 . AC A 32 PASS INDEL;BAVGPOST=0.999;BRSQ=0.621;LDAF=0.0055;AVGPOST=0.9937;RSQ=0.5534;ERATE=0.0006;THETA=0.0019;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227166369 . ACCT A 523 PASS INDEL;BAVGPOST=0.984;BRSQ=0.540;LDAF=0.0289;AVGPOST=0.9708;RSQ=0.5747;ERATE=0.0053;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 227166376 . TACAC T 383 PASS INDEL;BAVGPOST=0.990;BRSQ=0.626;LDAF=0.0125;AVGPOST=0.9927;RSQ=0.7684;ERATE=0.0005;THETA=0.0020;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 227166391 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.962;BRSQ=0.404;LDAF=0.0451;AVGPOST=0.9571;RSQ=0.6523;ERATE=0.0006;THETA=0.0008;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 227166398 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.831;LDAF=0.0176;AVGPOST=0.9848;RSQ=0.6753;ERATE=0.0008;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 227166413 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.910;BRSQ=0.555;LDAF=0.1110;AVGPOST=0.9220;RSQ=0.7504;ERATE=0.0035;THETA=0.0005;AC=200;AN=2184 GT:DS:GL:BD 0.09157509 0
1 227166428 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.959;BRSQ=0.392;LDAF=0.0580;AVGPOST=0.9346;RSQ=0.5727;ERATE=0.0081;THETA=0.0007;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 227166431 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.939;BRSQ=0.533;LDAF=0.0912;AVGPOST=0.9303;RSQ=0.7124;ERATE=0.0057;THETA=0.0005;AC=162;AN=2184 GT:DS:GL:BD 0.07417583 0
1 227166435 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.952;BRSQ=0.559;LDAF=0.0666;AVGPOST=0.9503;RSQ=0.7362;ERATE=0.0004;THETA=0.0004;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 227166470 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.573;LDAF=0.0108;AVGPOST=0.9867;RSQ=0.5344;ERATE=0.0010;THETA=0.0013;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227166475 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0041;AVGPOST=0.9985;RSQ=0.8471;ERATE=0.0003;THETA=0.0035;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227166498 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.685;LDAF=0.0098;AVGPOST=0.9910;RSQ=0.6552;ERATE=0.0008;THETA=0.0046;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227166501 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6261;ERATE=0.0004;THETA=0.0025;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227166527 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.864;LDAF=0.0366;AVGPOST=0.9842;RSQ=0.8320;ERATE=0.0020;THETA=0.0012;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 227166563 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.951;BRSQ=0.695;LDAF=0.0771;AVGPOST=0.9505;RSQ=0.7615;ERATE=0.0029;THETA=0.0003;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 227166573 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.952;BRSQ=0.717;LDAF=0.0791;AVGPOST=0.9591;RSQ=0.8164;ERATE=0.0004;THETA=0.0078;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 227166590 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.952;BRSQ=0.859;LDAF=0.1432;AVGPOST=0.9495;RSQ=0.8804;ERATE=0.0004;THETA=0.0010;AC=294;AN=2184 GT:DS:GL:BD 0.13461539 0
1 227166592 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.951;BRSQ=0.860;LDAF=0.1580;AVGPOST=0.9387;RSQ=0.8616;ERATE=0.0040;THETA=0.0063;AC=328;AN=2184 GT:DS:GL:BD 0.15018316 0
1 227166617 . TA T 6580 PASS INDEL;BAVGPOST=0.919;BRSQ=0.843;LDAF=0.2372;AVGPOST=0.9202;RSQ=0.8652;ERATE=0.0009;THETA=0.0031;AC=522;AN=2184 GT:DS:GL:BD 0.23901099 0
1 227166618 rs72111689 AC A 25690 PASS INDEL;BAVGPOST=0.937;BRSQ=0.884;LDAF=0.2922;AVGPOST=0.9349;RSQ=0.8977;ERATE=0.0065;THETA=0.0020;AC=639;AN=2184 GT:DS:GL:BD 0.29258242 0
1 227166622 . CT C 5299 PASS INDEL;BAVGPOST=0.900;BRSQ=0.774;LDAF=0.1998;AVGPOST=0.9147;RSQ=0.8303;ERATE=0.0012;THETA=0.0081;AC=437;AN=2184 GT:DS:GL:BD 0.20009157 0
1 227166758 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.577;LDAF=0.0020;AVGPOST=0.9978;RSQ=0.5132;ERATE=0.0007;THETA=0.0076;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227166783 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7182;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227166817 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.942;LDAF=0.0543;AVGPOST=0.9904;RSQ=0.9311;ERATE=0.0003;THETA=0.0022;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 227166916 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7786;ERATE=0.0003;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227166925 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.770;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7365;ERATE=0.0002;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227166950 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7041;ERATE=0.0003;THETA=0.0036;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227167036 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.798;LDAF=0.0058;AVGPOST=0.9947;RSQ=0.6331;ERATE=0.0006;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227167073 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.661;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.5754;ERATE=0.0009;THETA=0.0040;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227167119 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.632;LDAF=0.0022;AVGPOST=0.9969;RSQ=0.4317;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227167164 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0031;AVGPOST=0.9964;RSQ=0.5323;ERATE=0.0004;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227167170 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.6145;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227167221 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.964;LDAF=0.0145;AVGPOST=0.9969;RSQ=0.9265;ERATE=0.0003;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 227167222 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8889;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227167464 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.858;LDAF=0.0082;AVGPOST=0.9978;RSQ=0.8999;ERATE=0.0003;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 227167543 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0057;AVGPOST=0.9971;RSQ=0.8316;ERATE=0.0003;THETA=0.0038;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227167696 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0155;AVGPOST=0.9992;RSQ=0.9783;ERATE=0.0003;THETA=0.0049;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 227167988 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0152;AVGPOST=0.9997;RSQ=0.9914;ERATE=0.0003;THETA=0.0019;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 227168332 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0235;AVGPOST=0.9993;RSQ=0.9870;ERATE=0.0002;THETA=0.0037;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 227168391 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.7953;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227168393 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6196;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227168496 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.771;LDAF=0.0056;AVGPOST=0.9958;RSQ=0.7074;ERATE=0.0005;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227168555 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.987;LDAF=0.3000;AVGPOST=0.9699;RSQ=0.9474;ERATE=0.0012;THETA=0.0083;AC=654;AN=2184 GT:DS:GL:BD 0.29945055 0
1 227168868 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6077;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227169010 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.5963;ERATE=0.0004;THETA=0.0051;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227169023 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.552;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4486;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227169036 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.802;LDAF=0.0059;AVGPOST=0.9970;RSQ=0.8037;ERATE=0.0003;THETA=0.0011;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227169213 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.983;LDAF=0.8893;AVGPOST=0.9915;RSQ=0.9644;ERATE=0.0003;THETA=0.0004;AC=1945;AN=2184 GT:DS:GL:BD 0.89056778 1
1 227169271 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.786;LDAF=0.0071;AVGPOST=0.9964;RSQ=0.8069;ERATE=0.0002;THETA=0.0009;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227169395 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.783;LDAF=0.0038;AVGPOST=0.9973;RSQ=0.7098;ERATE=0.0003;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227169423 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.7981;ERATE=0.0003;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227169473 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9568;ERATE=0.0003;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227169481 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0049;AVGPOST=0.9994;RSQ=0.9509;ERATE=0.0002;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227169503 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6872;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227169567 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=1.0000;RSQ=0.9941;ERATE=0.0002;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227169616 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227169654 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9107;ERATE=0.0010;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227169701 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0012;AVGPOST=0.9997;RSQ=0.9139;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227169742 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227169897 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.950;LDAF=0.0048;AVGPOST=0.9996;RSQ=0.9597;ERATE=0.0002;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227170006 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0151;AVGPOST=0.9999;RSQ=0.9975;ERATE=0.0002;THETA=0.0006;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 227170049 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0039;AVGPOST=0.9994;RSQ=0.9293;ERATE=0.0003;THETA=0.0018;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227170096 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0002;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227170189 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.0036;AVGPOST=0.9983;RSQ=0.8117;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227170288 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227170297 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0097;AVGPOST=0.9991;RSQ=0.9632;ERATE=0.0008;THETA=0.0007;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 227170298 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.961;LDAF=0.3460;AVGPOST=0.9714;RSQ=0.9566;ERATE=0.0115;THETA=0.0024;AC=749;AN=2184 GT:DS:GL:BD 0.34294870 0
1 227170313 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9294;ERATE=0.0002;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227170351 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0056;AVGPOST=0.9999;RSQ=0.9894;ERATE=0.0002;THETA=0.0014;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227170353 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227170398 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0500;ERATE=0.0002;THETA=0.0014;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 227170401 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0006;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227170434 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227170480 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227170543 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.994;LDAF=0.2153;AVGPOST=0.9957;RSQ=0.9909;ERATE=0.0046;THETA=0.0005;AC=469;AN=2184 GT:DS:GL:BD 0.21474358 0
1 227170592 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8154;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227170603 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227170644 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8845;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227170646 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227170648 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0073;AVGPOST=0.9999;RSQ=0.9940;ERATE=0.0002;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 227170675 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4902;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227170708 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0049;AVGPOST=0.9993;RSQ=0.9401;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227170768 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.965;LDAF=0.2686;AVGPOST=0.9855;RSQ=0.9708;ERATE=0.0228;THETA=0.0004;AC=581;AN=2184 GT:DS:GL:BD 0.26602563 0
1 227170965 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8241;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227171070 . GACA G 248 PASS INDEL;BAVGPOST=0.999;BRSQ=0.844;LDAF=0.0051;AVGPOST=0.9989;RSQ=0.9012;ERATE=0.0004;THETA=0.0010;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227171147 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0051;AVGPOST=0.9997;RSQ=0.9741;ERATE=0.0003;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227171210 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0685;AVGPOST=0.9987;RSQ=0.9927;ERATE=0.0002;THETA=0.0006;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 227171248 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227171280 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227171412 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0156;AVGPOST=1.0000;RSQ=0.9988;ERATE=0.0002;THETA=0.0016;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 227171428 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9122;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227171484 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9094;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227171487 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9434;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227171550 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227171571 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227171584 rs3215919 GT G 21758 PASS INDEL;BAVGPOST=0.961;BRSQ=0.915;LDAF=0.2820;AVGPOST=0.9791;RSQ=0.9645;ERATE=0.0011;THETA=0.0003;AC=615;AN=2184 GT:DS:GL:BD 0.28159341 0
1 227171587 . TG T 1787 PASS INDEL;BAVGPOST=0.946;BRSQ=0.881;LDAF=0.2628;AVGPOST=0.9550;RSQ=0.9237;ERATE=0.0019;THETA=0.0010;AC=575;AN=2184 GT:DS:GL:BD 0.26327839 0
1 227171591 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5752;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227171595 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9420;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227171738 . G GT 8145 PASS INDEL;BAVGPOST=0.906;BRSQ=0.723;LDAF=0.2044;AVGPOST=0.8942;RSQ=0.7774;ERATE=0.0060;THETA=0.0008;AC=402;AN=2184 GT:DS:GL:BD 0.18406594 0
1 227171786 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7496;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227171802 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.704;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9524;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227171916 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9562;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227171934 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227171958 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2140;AVGPOST=0.9981;RSQ=0.9957;ERATE=0.0028;THETA=0.0003;AC=464;AN=2184 GT:DS:GL:BD 0.21245421 0
1 227172023 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227172105 . TCC T 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5838;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227172117 . G GT 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.765;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.8053;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227172235 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227172236 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=0.9999;RSQ=0.0499;ERATE=0.0002;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 227172259 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9165;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227172290 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2814;AVGPOST=0.9996;RSQ=0.9992;ERATE=0.0049;THETA=0.0007;AC=613;AN=2184 GT:DS:GL:BD 0.28067765 0
1 227172516 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0082;AVGPOST=1.0000;RSQ=0.9973;ERATE=0.0002;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 227172518 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1314;AVGPOST=0.9995;RSQ=0.9983;ERATE=0.0022;THETA=0.0002;AC=285;AN=2184 GT:DS:GL:BD 0.13049451 0
1 227172604 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227172605 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227172686 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0002;THETA=0.0052;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227172706 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227172712 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.9005;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227172782 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0081;AVGPOST=0.9993;RSQ=0.9595;ERATE=0.0004;THETA=0.0001;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227172843 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8559;ERATE=0.0004;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227172903 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3000;AVGPOST=0.9997;RSQ=0.9995;ERATE=0.0002;THETA=0.0003;AC=653;AN=2184 GT:DS:GL:BD 0.29899266 0
1 227172935 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2959;AVGPOST=0.9997;RSQ=0.9995;ERATE=0.0007;THETA=0.0004;AC=644;AN=2184 GT:DS:GL:BD 0.29487181 0
1 227172949 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227172973 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227172987 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227172988 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227172992 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8704;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227172994 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227173170 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5800;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227173194 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.765;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6828;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227173362 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5640;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227173420 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.653;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.6125;ERATE=0.0002;THETA=0.0050;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227173477 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3233;AVGPOST=0.9995;RSQ=0.9991;ERATE=0.0002;THETA=0.0003;AC=704;AN=2184 GT:DS:GL:BD 0.32234433 0
1 227173537 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.987;LDAF=0.1587;AVGPOST=0.9969;RSQ=0.9910;ERATE=0.0007;THETA=0.0006;AC=346;AN=2184 GT:DS:GL:BD 0.15842491 0
1 227173577 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.0043;AVGPOST=0.9994;RSQ=0.9436;ERATE=0.0002;THETA=0.0001;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227173597 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.700;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5415;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227173613 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.947;LDAF=0.0133;AVGPOST=0.9981;RSQ=0.9519;ERATE=0.0002;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 227173625 . CTCT C 113 PASS INDEL;BAVGPOST=0.997;BRSQ=0.765;LDAF=0.0074;AVGPOST=0.9970;RSQ=0.8402;ERATE=0.0004;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 227173626 . TCTTC T 1138 PASS INDEL;BAVGPOST=0.997;BRSQ=0.766;LDAF=0.0076;AVGPOST=0.9970;RSQ=0.8347;ERATE=0.0005;THETA=0.0009;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 227173666 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.838;LDAF=0.0042;AVGPOST=0.9989;RSQ=0.8858;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227173731 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.813;LDAF=0.0109;AVGPOST=0.9955;RSQ=0.8409;ERATE=0.0004;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 227173879 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5513;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227173886 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0083;AVGPOST=0.9999;RSQ=0.9947;ERATE=0.0002;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 227173892 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3357;AVGPOST=0.9975;RSQ=0.9957;ERATE=0.0008;THETA=0.0002;AC=732;AN=2184 GT:DS:GL:BD 0.33516484 0
1 227173942 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9882;ERATE=0.0002;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227174055 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0151;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 227174122 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1372;AVGPOST=0.9998;RSQ=0.9993;ERATE=0.0002;THETA=0.0002;AC=298;AN=2184 GT:DS:GL:BD 0.13644689 0
1 227174125 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0027;AVGPOST=0.9998;RSQ=0.9690;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227174126 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8692;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227174145 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3757;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=819;AN=2184 GT:DS:GL:BD 0.37500000 0
1 227174166 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8763;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227174210 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3382;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=737;AN=2184 GT:DS:GL:BD 0.33745420 0
1 227174233 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227174246 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227174249 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227174294 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227174318 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227174332 . T TG 74 PASS INDEL;BAVGPOST=1.000;BRSQ=0.733;LDAF=0.0015;AVGPOST=0.9978;RSQ=0.3496;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227174360 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227174370 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0018;AVGPOST=1.0000;RSQ=0.9879;ERATE=0.0002;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227174393 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227174408 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0114;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227174447 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8316;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227174571 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0073;AVGPOST=1.0000;RSQ=0.9970;ERATE=0.0002;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 227174668 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0115;AVGPOST=0.9998;RSQ=0.9929;ERATE=0.0003;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227174672 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227174714 . TTTC T 356 PASS INDEL;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9545;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227174787 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9490;ERATE=0.0002;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227174823 rs11420839 A AT 44560 PASS INDEL;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3224;AVGPOST=0.9973;RSQ=0.9954;ERATE=0.0004;THETA=0.0003;AC=703;AN=2184 GT:DS:GL:BD 0.32188645 0
1 227174902 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.3902;AVGPOST=0.9966;RSQ=0.9939;ERATE=0.0004;THETA=0.0003;AC=852;AN=2184 GT:DS:GL:BD 0.39010990 0
1 227174947 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6553;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227175081 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7363;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227175094 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0021;AVGPOST=0.9976;RSQ=0.5705;ERATE=0.0003;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227175119 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1254;AVGPOST=0.9988;RSQ=0.9953;ERATE=0.0004;THETA=0.0003;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 227175165 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0061;AVGPOST=0.9997;RSQ=0.9783;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227175199 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9539;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227175228 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0153;AVGPOST=0.9995;RSQ=0.9868;ERATE=0.0002;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 227175245 rs3215920 C CT 40763 PASS INDEL;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.2993;AVGPOST=0.9966;RSQ=0.9941;ERATE=0.0009;THETA=0.0003;AC=651;AN=2184 GT:DS:GL:BD 0.29807693 0
1 227175252 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0067;AVGPOST=0.9993;RSQ=0.9562;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 227175253 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4481;AVGPOST=0.9967;RSQ=0.9949;ERATE=0.0003;THETA=0.0039;AC=976;AN=2184 GT:DS:GL:BD 0.44688645 0
1 227175295 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0159;AVGPOST=0.9994;RSQ=0.9859;ERATE=0.0002;THETA=0.0002;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 227175367 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3291;AVGPOST=0.9919;RSQ=0.9871;ERATE=0.0016;THETA=0.0007;AC=717;AN=2184 GT:DS:GL:BD 0.32829669 0
1 227175421 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9545;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227175468 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9658;ERATE=0.0003;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227175473 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0117;AVGPOST=0.9981;RSQ=0.9411;ERATE=0.0002;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227175489 rs77582376 GC G 44608 PASS INDEL;BAVGPOST=0.989;BRSQ=0.984;LDAF=0.5753;AVGPOST=0.9880;RSQ=0.9832;ERATE=0.0008;THETA=0.0004;AC=1254;AN=2184 GT:DS:GL:BD 0.57417583 1
1 227175573 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.545;LDAF=0.0081;AVGPOST=0.9903;RSQ=0.5642;ERATE=0.0015;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227175604 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9824;ERATE=0.0002;THETA=0.0027;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227175617 . A ACAT 90 PASS INDEL;BAVGPOST=0.999;BRSQ=0.802;LDAF=0.0035;AVGPOST=0.9968;RSQ=0.6762;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227175672 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.603;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7132;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227175701 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7737;ERATE=0.0002;THETA=0.0037;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227175716 . C CTT 92 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.6685;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227175724 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.784;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.7102;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227175749 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9654;ERATE=0.0002;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227175789 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0019;AVGPOST=0.9996;RSQ=0.9106;ERATE=0.0002;THETA=0.0058;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227175801 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227175801 . G GTTC 61 PASS INDEL;BAVGPOST=1.000;BRSQ=0.740;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4254;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227175802 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1145;AVGPOST=0.9984;RSQ=0.9940;ERATE=0.0003;THETA=0.0006;AC=250;AN=2184 GT:DS:GL:BD 0.11446887 0
1 227175806 . T TAAAG 13463 PASS INDEL;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0481;AVGPOST=0.9952;RSQ=0.9671;ERATE=0.0006;THETA=0.0002;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 227175882 . AGGCCTGGGT A 512 PASS INDEL;BAVGPOST=0.998;BRSQ=0.650;LDAF=0.0051;AVGPOST=0.9984;RSQ=0.8742;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227175958 . C CTT 252 PASS INDEL;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5222;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227175966 . CCT C 3201 PASS INDEL;BAVGPOST=0.933;BRSQ=0.846;LDAF=0.2633;AVGPOST=0.8992;RSQ=0.8200;ERATE=0.0112;THETA=0.0007;AC=584;AN=2184 GT:DS:GL:BD 0.26739928 0
1 227175967 rs10586161 CTCT C 35511 PASS INDEL;BAVGPOST=0.971;BRSQ=0.945;LDAF=0.3126;AVGPOST=0.9826;RSQ=0.9727;ERATE=0.0005;THETA=0.0007;AC=688;AN=2184 GT:DS:GL:BD 0.31501833 0
1 227175972 . CTTA C 8274 PASS INDEL;BAVGPOST=0.971;BRSQ=0.945;LDAF=0.3108;AVGPOST=0.9799;RSQ=0.9686;ERATE=0.0005;THETA=0.0002;AC=688;AN=2184 GT:DS:GL:BD 0.31501833 0
1 227176011 . G GCACT 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.722;LDAF=0.0019;AVGPOST=0.9973;RSQ=0.4296;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227176032 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7339;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227176043 . T TAAAC 264 PASS INDEL;BAVGPOST=0.999;BRSQ=0.855;LDAF=0.0032;AVGPOST=0.9978;RSQ=0.7433;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227176074 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0044;AVGPOST=0.9989;RSQ=0.9038;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227176099 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0050;AVGPOST=0.9982;RSQ=0.8632;ERATE=0.0002;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227176105 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0041;AVGPOST=0.9979;RSQ=0.8092;ERATE=0.0004;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227176107 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5212;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227176108 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9995;RSQ=0.9391;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227176116 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.881;LDAF=0.0097;AVGPOST=0.9979;RSQ=0.9211;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 227176129 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.6005;ERATE=0.0003;THETA=0.0076;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227176142 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.8166;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227176143 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5642;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227176164 rs10586162 ACAG A 33722 PASS INDEL;BAVGPOST=0.989;BRSQ=0.977;LDAF=0.3319;AVGPOST=0.9882;RSQ=0.9821;ERATE=0.0007;THETA=0.0004;AC=724;AN=2184 GT:DS:GL:BD 0.33150184 0
1 227176260 rs113320207 T TAAG 61007 PASS INDEL;BAVGPOST=0.975;BRSQ=0.956;LDAF=0.3880;AVGPOST=0.9826;RSQ=0.9744;ERATE=0.0007;THETA=0.0004;AC=847;AN=2184 GT:DS:GL:BD 0.38782051 0
1 227176261 rs67065450 A AAGG 23219 PASS INDEL;BAVGPOST=0.976;BRSQ=0.956;LDAF=0.3854;AVGPOST=0.9841;RSQ=0.9760;ERATE=0.0004;THETA=0.0002;AC=840;AN=2184 GT:DS:GL:BD 0.38461539 0
1 227176263 . G GAAC 23694 PASS INDEL;BAVGPOST=0.975;BRSQ=0.956;LDAF=0.3850;AVGPOST=0.9841;RSQ=0.9764;ERATE=0.0005;THETA=0.0007;AC=840;AN=2184 GT:DS:GL:BD 0.38461539 0
1 227176311 . G GA 194 PASS INDEL;BAVGPOST=1.000;BRSQ=0.746;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8009;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227176372 . A ATACT 240 PASS INDEL;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0007;AVGPOST=0.9991;RSQ=0.5203;ERATE=0.0003;THETA=0.0074;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227176416 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1291;AVGPOST=0.9979;RSQ=0.9931;ERATE=0.0003;THETA=0.0007;AC=281;AN=2184 GT:DS:GL:BD 0.12866300 0
1 227176457 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.5454;ERATE=0.0002;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227176479 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.7323;AVGPOST=0.9968;RSQ=0.9944;ERATE=0.0004;THETA=0.0005;AC=1596;AN=2184 GT:DS:GL:BD 0.73076922 1
1 227176508 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.6950;ERATE=0.0004;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227176511 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7321;AVGPOST=0.9980;RSQ=0.9968;ERATE=0.0002;THETA=0.0004;AC=1596;AN=2184 GT:DS:GL:BD 0.73076922 1
1 227176557 . A ATTTG 1314 PASS INDEL;BAVGPOST=0.998;BRSQ=0.854;LDAF=0.0048;AVGPOST=0.9978;RSQ=0.8280;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227176579 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0074;AVGPOST=0.9996;RSQ=0.9773;ERATE=0.0003;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 227176641 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.741;LDAF=0.0032;AVGPOST=0.9973;RSQ=0.6713;ERATE=0.0004;THETA=0.0014;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227176671 . A AG 4453 PASS INDEL;BAVGPOST=0.994;BRSQ=0.954;LDAF=0.0583;AVGPOST=0.9873;RSQ=0.9135;ERATE=0.0004;THETA=0.0031;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 227176738 . G GTCTT 362 PASS INDEL;BAVGPOST=0.999;BRSQ=0.703;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7986;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227176748 . C CTACA 15 PASS INDEL;BAVGPOST=0.999;BRSQ=0.764;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5647;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227176767 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0002;THETA=0.0054;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227176768 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6938;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227176871 . TAA T 156 PASS INDEL;BAVGPOST=0.999;BRSQ=0.785;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8024;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227177061 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3228;AVGPOST=0.9987;RSQ=0.9979;ERATE=0.0003;THETA=0.0005;AC=703;AN=2184 GT:DS:GL:BD 0.32188645 0
1 227177069 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.951;LDAF=0.0077;AVGPOST=0.9976;RSQ=0.9014;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 227177137 . C CT 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0031;AVGPOST=0.9989;RSQ=0.8609;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227177193 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.3159;AVGPOST=0.9980;RSQ=0.9965;ERATE=0.0005;THETA=0.0004;AC=688;AN=2184 GT:DS:GL:BD 0.31501833 0
1 227177225 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1365;AVGPOST=0.9997;RSQ=0.9989;ERATE=0.0002;THETA=0.0002;AC=299;AN=2184 GT:DS:GL:BD 0.13690476 0
1 227177256 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227177289 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0026;AVGPOST=0.9997;RSQ=0.9595;ERATE=0.0002;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227177293 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3231;AVGPOST=0.9981;RSQ=0.9967;ERATE=0.0004;THETA=0.0003;AC=703;AN=2184 GT:DS:GL:BD 0.32188645 0
1 227177357 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.6405;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227177404 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0115;AVGPOST=0.9998;RSQ=0.9917;ERATE=0.0002;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227177422 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227177444 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3382;AVGPOST=0.9989;RSQ=0.9980;ERATE=0.0005;THETA=0.0002;AC=736;AN=2184 GT:DS:GL:BD 0.33699635 0
1 227177467 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227177468 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9824;ERATE=0.0002;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227177542 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.962;LDAF=0.0083;AVGPOST=0.9992;RSQ=0.9692;ERATE=0.0002;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 227177625 . CAT C 291 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9437;ERATE=0.0004;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227177700 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9787;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227177727 . CT C 268 PASS INDEL;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0051;AVGPOST=0.9982;RSQ=0.8652;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227177730 . AAAAAGTT A 967 PASS INDEL;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0045;AVGPOST=0.9994;RSQ=0.9398;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227177731 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3153;AVGPOST=0.9952;RSQ=0.9918;ERATE=0.0015;THETA=0.0003;AC=685;AN=2184 GT:DS:GL:BD 0.31364468 0
1 227177872 . CTG C 2187 PASS INDEL;BAVGPOST=0.995;BRSQ=0.878;LDAF=0.0176;AVGPOST=0.9941;RSQ=0.8829;ERATE=0.0004;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 227177883 rs80259012 T TACA 55724 PASS INDEL;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.3154;AVGPOST=0.9959;RSQ=0.9929;ERATE=0.0018;THETA=0.0003;AC=686;AN=2184 GT:DS:GL:BD 0.31410256 0
1 227177884 rs67424708 A ACCC 1896 PASS INDEL;BAVGPOST=0.887;BRSQ=0.735;LDAF=0.2291;AVGPOST=0.9158;RSQ=0.8440;ERATE=0.0038;THETA=0.0004;AC=505;AN=2184 GT:DS:GL:BD 0.23122710 0
1 227177985 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8522;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227178006 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227178087 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6332;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227178127 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3158;AVGPOST=0.9989;RSQ=0.9979;ERATE=0.0006;THETA=0.0002;AC=688;AN=2184 GT:DS:GL:BD 0.31501833 0
1 227178185 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0023;AVGPOST=0.9987;RSQ=0.7580;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227178186 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0156;AVGPOST=0.9999;RSQ=0.9963;ERATE=0.0002;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 227178197 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8651;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227178218 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8430;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227178320 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0047;AVGPOST=0.9993;RSQ=0.9323;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227178458 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.936;LDAF=0.0360;AVGPOST=0.9963;RSQ=0.9638;ERATE=0.0003;THETA=0.0003;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 227178463 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0043;AVGPOST=0.9987;RSQ=0.8699;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227178524 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9143;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227178579 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6098;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227178700 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.3155;AVGPOST=0.9987;RSQ=0.9973;ERATE=0.0003;THETA=0.0003;AC=688;AN=2184 GT:DS:GL:BD 0.31501833 0
1 227178713 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.3158;AVGPOST=0.9983;RSQ=0.9969;ERATE=0.0004;THETA=0.0003;AC=688;AN=2184 GT:DS:GL:BD 0.31501833 0
1 227178715 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227178793 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0150;AVGPOST=0.9978;RSQ=0.9455;ERATE=0.0003;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 227178826 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.890;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9215;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227178899 . T TA 102 PASS INDEL;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6231;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227178948 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.7480;AVGPOST=0.9986;RSQ=0.9968;ERATE=0.0003;THETA=0.0010;AC=1633;AN=2184 GT:DS:GL:BD 0.74771065 1
1 227178962 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3008;AVGPOST=0.9996;RSQ=0.9992;ERATE=0.0003;THETA=0.0001;AC=655;AN=2184 GT:DS:GL:BD 0.29990843 0
1 227179037 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3151;AVGPOST=0.9985;RSQ=0.9973;ERATE=0.0002;THETA=0.0003;AC=686;AN=2184 GT:DS:GL:BD 0.31410256 0
1 227179047 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1284;AVGPOST=0.9997;RSQ=0.9989;ERATE=0.0003;THETA=0.0003;AC=281;AN=2184 GT:DS:GL:BD 0.12866300 0
1 227179054 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2950;AVGPOST=0.9993;RSQ=0.9987;ERATE=0.0002;THETA=0.0005;AC=642;AN=2184 GT:DS:GL:BD 0.29395604 0
1 227179103 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.745;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7927;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227179136 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0034;AVGPOST=0.9988;RSQ=0.8825;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227179176 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.864;LDAF=0.0051;AVGPOST=0.9985;RSQ=0.8802;ERATE=0.0004;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227179177 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227179230 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227179256 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8099;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227179262 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8522;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227179297 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227179358 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.8916;AVGPOST=0.9995;RSQ=0.9972;ERATE=0.0004;THETA=0.0004;AC=1947;AN=2184 GT:DS:GL:BD 0.89148355 1
1 227179501 rs79028744 AATAAGCACCT A 43801 PASS INDEL;BAVGPOST=0.994;BRSQ=0.986;LDAF=0.3005;AVGPOST=0.9957;RSQ=0.9916;ERATE=0.0007;THETA=0.0004;AC=657;AN=2184 GT:DS:GL:BD 0.30082417 0
1 227179707 rs67503553 GGGAGGGTGGGGAGAGTGA G 12942 PASS INDEL;BAVGPOST=0.906;BRSQ=0.368;LDAF=0.8267;AVGPOST=0.8053;RSQ=0.4653;ERATE=0.0076;THETA=0.0003;AC=1856;AN=2184 GT:DS:GL:BD 0.84981686 1
1 227179827 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.815;LDAF=0.0141;AVGPOST=0.9935;RSQ=0.8259;ERATE=0.0004;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 227179829 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0144;AVGPOST=0.9989;RSQ=0.9696;ERATE=0.0003;THETA=0.0002;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 227179861 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0086;AVGPOST=0.9993;RSQ=0.9620;ERATE=0.0003;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 227180074 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0117;AVGPOST=0.9995;RSQ=0.9843;ERATE=0.0003;THETA=0.0008;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227180234 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7400;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227180290 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8113;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227180407 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7652;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227180449 . ATCTCTT A 117 PASS INDEL;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6964;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227180498 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0114;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227180710 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227180805 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0078;AVGPOST=0.9990;RSQ=0.9445;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227180858 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.1367;AVGPOST=0.9992;RSQ=0.9970;ERATE=0.0002;THETA=0.0002;AC=297;AN=2184 GT:DS:GL:BD 0.13598901 0
1 227180947 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3228;AVGPOST=0.9985;RSQ=0.9974;ERATE=0.0003;THETA=0.0004;AC=702;AN=2184 GT:DS:GL:BD 0.32142857 0
1 227180981 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3247;AVGPOST=0.9971;RSQ=0.9959;ERATE=0.0003;THETA=0.0002;AC=705;AN=2184 GT:DS:GL:BD 0.32280219 0
1 227180982 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7917;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227181047 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7189;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227181277 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6834;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227181277 . G GC 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227181350 . TCTTA T 210 PASS INDEL;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0038;AVGPOST=0.9982;RSQ=0.7991;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227181386 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.889;LDAF=0.0051;AVGPOST=0.9985;RSQ=0.8854;ERATE=0.0002;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227181461 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227181554 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.965;LDAF=0.2868;AVGPOST=0.9879;RSQ=0.9808;ERATE=0.0004;THETA=0.0003;AC=626;AN=2184 GT:DS:GL:BD 0.28663003 0
1 227181555 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.965;LDAF=0.3020;AVGPOST=0.9886;RSQ=0.9819;ERATE=0.0003;THETA=0.0007;AC=659;AN=2184 GT:DS:GL:BD 0.30173993 0
1 227181662 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9316;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227181817 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227181838 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3008;AVGPOST=0.9997;RSQ=0.9994;ERATE=0.0003;THETA=0.0003;AC=655;AN=2184 GT:DS:GL:BD 0.29990843 0
1 227181860 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0115;AVGPOST=0.9999;RSQ=0.9964;ERATE=0.0002;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227181923 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3123;AVGPOST=0.9995;RSQ=0.9991;ERATE=0.0003;THETA=0.0007;AC=680;AN=2184 GT:DS:GL:BD 0.31135532 0
1 227181938 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9594;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227181945 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227181946 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0160;AVGPOST=0.9996;RSQ=0.9902;ERATE=0.0002;THETA=0.0002;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 227182033 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8967;AVGPOST=1.0000;RSQ=0.9998;ERATE=0.0002;THETA=0.0002;AC=1958;AN=2184 GT:DS:GL:BD 0.89652014 1
1 227182138 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9524;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227182169 . AC A 130 PASS INDEL;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.3803;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227182176 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6406;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227182179 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.1118;AVGPOST=0.9984;RSQ=0.9943;ERATE=0.0004;THETA=0.0007;AC=243;AN=2184 GT:DS:GL:BD 0.11126374 0
1 227182346 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9882;ERATE=0.0002;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227182426 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9215;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227182475 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227182542 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227182575 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8596;AVGPOST=0.9998;RSQ=0.9993;ERATE=0.0003;THETA=0.0006;AC=1877;AN=2184 GT:DS:GL:BD 0.85943222 1
1 227182607 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227182659 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227182674 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0123;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 227182754 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1609;AVGPOST=1.0000;RSQ=0.9998;ERATE=0.0002;THETA=0.0005;AC=351;AN=2184 GT:DS:GL:BD 0.16071428 0
1 227182802 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227182808 . TA T 1337 PASS INDEL;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0117;AVGPOST=0.9994;RSQ=0.9757;ERATE=0.0003;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227182874 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9304;ERATE=0.0006;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227182957 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1578;AVGPOST=0.9996;RSQ=0.9988;ERATE=0.0002;THETA=0.0008;AC=344;AN=2184 GT:DS:GL:BD 0.15750916 0
1 227183022 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.979;LDAF=0.2740;AVGPOST=0.9969;RSQ=0.9944;ERATE=0.0006;THETA=0.0002;AC=599;AN=2184 GT:DS:GL:BD 0.27426741 0
1 227183083 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=1.0000;RSQ=0.9941;ERATE=0.0002;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227183125 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3009;AVGPOST=0.9993;RSQ=0.9986;ERATE=0.0003;THETA=0.0003;AC=655;AN=2184 GT:DS:GL:BD 0.29990843 0
1 227183200 . T TCC 16479 PASS INDEL;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.3154;AVGPOST=0.9965;RSQ=0.9937;ERATE=0.0010;THETA=0.0004;AC=686;AN=2184 GT:DS:GL:BD 0.31410256 0
1 227183334 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.720;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227183359 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3160;AVGPOST=0.9992;RSQ=0.9984;ERATE=0.0004;THETA=0.0004;AC=688;AN=2184 GT:DS:GL:BD 0.31501833 0
1 227183434 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3010;AVGPOST=0.9985;RSQ=0.9971;ERATE=0.0003;THETA=0.0003;AC=655;AN=2184 GT:DS:GL:BD 0.29990843 0
1 227183669 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0117;AVGPOST=0.9995;RSQ=0.9817;ERATE=0.0003;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227183704 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0077;AVGPOST=0.9996;RSQ=0.9759;ERATE=0.0002;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227183732 . CATAA C 74 PASS INDEL;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5215;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227183857 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.931;LDAF=0.0036;AVGPOST=0.9984;RSQ=0.8014;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227183865 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3093;AVGPOST=0.9941;RSQ=0.9903;ERATE=0.0006;THETA=0.0004;AC=673;AN=2184 GT:DS:GL:BD 0.30815017 0
1 227183912 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0376;AVGPOST=0.9995;RSQ=0.9951;ERATE=0.0003;THETA=0.0004;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 227183991 . TCC T 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227184007 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227184074 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2960;AVGPOST=0.9992;RSQ=0.9985;ERATE=0.0003;THETA=0.0003;AC=644;AN=2184 GT:DS:GL:BD 0.29487181 0
1 227184143 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227184281 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.753;LDAF=0.0025;AVGPOST=0.9971;RSQ=0.5221;ERATE=0.0006;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227184281 . CG C 301 PASS INDEL;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8796;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227184303 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8903;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227184365 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9009;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227184366 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9009;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227184388 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.3153;AVGPOST=0.9983;RSQ=0.9971;ERATE=0.0003;THETA=0.0005;AC=688;AN=2184 GT:DS:GL:BD 0.31501833 0
1 227184447 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0044;AVGPOST=0.9983;RSQ=0.8685;ERATE=0.0002;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227184486 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.960;LDAF=0.0076;AVGPOST=0.9993;RSQ=0.9661;ERATE=0.0002;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 227184508 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0115;AVGPOST=0.9998;RSQ=0.9940;ERATE=0.0002;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227184510 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0039;AVGPOST=0.9991;RSQ=0.9125;ERATE=0.0002;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227184515 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6183;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227184581 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1290;AVGPOST=0.9970;RSQ=0.9893;ERATE=0.0004;THETA=0.0007;AC=281;AN=2184 GT:DS:GL:BD 0.12866300 0
1 227184582 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6850;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227184590 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9496;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227184706 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.703;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.5179;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227184895 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6345;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227184901 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9996;RSQ=0.9559;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227184912 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.944;LDAF=0.0375;AVGPOST=0.9988;RSQ=0.9874;ERATE=0.0002;THETA=0.0004;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 227185011 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227185047 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.982;LDAF=0.2992;AVGPOST=0.9952;RSQ=0.9913;ERATE=0.0008;THETA=0.0002;AC=652;AN=2184 GT:DS:GL:BD 0.29853481 0
1 227185071 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.979;LDAF=0.1606;AVGPOST=0.9979;RSQ=0.9931;ERATE=0.0003;THETA=0.0004;AC=351;AN=2184 GT:DS:GL:BD 0.16071428 0
1 227185288 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2971;AVGPOST=0.9975;RSQ=0.9954;ERATE=0.0006;THETA=0.0007;AC=646;AN=2184 GT:DS:GL:BD 0.29578754 0
1 227185375 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2957;AVGPOST=0.9989;RSQ=0.9979;ERATE=0.0003;THETA=0.0003;AC=644;AN=2184 GT:DS:GL:BD 0.29487181 0
1 227185385 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2959;AVGPOST=0.9987;RSQ=0.9975;ERATE=0.0004;THETA=0.0002;AC=644;AN=2184 GT:DS:GL:BD 0.29487181 0
1 227185393 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0035;AVGPOST=0.9996;RSQ=0.9483;ERATE=0.0002;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227185521 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9882;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227185663 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0164;AVGPOST=0.9993;RSQ=0.9859;ERATE=0.0003;THETA=0.0002;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 227185839 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.8896;AVGPOST=0.9930;RSQ=0.9719;ERATE=0.0005;THETA=0.0003;AC=1944;AN=2184 GT:DS:GL:BD 0.89010990 1
1 227185887 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.763;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6082;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227186192 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2957;AVGPOST=0.9994;RSQ=0.9984;ERATE=0.0003;THETA=0.0003;AC=644;AN=2184 GT:DS:GL:BD 0.29487181 0
1 227186193 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0021;AVGPOST=0.9976;RSQ=0.5568;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227186240 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9983;RSQ=0.8288;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227186392 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0036;AVGPOST=0.9979;RSQ=0.7743;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227186490 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0020;AVGPOST=0.9973;RSQ=0.5368;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227186656 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.926;LDAF=0.0120;AVGPOST=0.9980;RSQ=0.9403;ERATE=0.0003;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 227186746 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.926;LDAF=0.0046;AVGPOST=0.9985;RSQ=0.8595;ERATE=0.0004;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227187003 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0146;AVGPOST=0.9959;RSQ=0.8876;ERATE=0.0009;THETA=0.0002;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 227187007 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.982;LDAF=0.2914;AVGPOST=0.9865;RSQ=0.9763;ERATE=0.0009;THETA=0.0002;AC=643;AN=2184 GT:DS:GL:BD 0.29441392 0
1 227187147 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0054;AVGPOST=0.9979;RSQ=0.8407;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227187168 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0157;AVGPOST=0.9997;RSQ=0.9918;ERATE=0.0002;THETA=0.0002;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 227187338 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0136;AVGPOST=0.9956;RSQ=0.8723;ERATE=0.0004;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227187360 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5291;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227187440 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2937;AVGPOST=0.9978;RSQ=0.9955;ERATE=0.0005;THETA=0.0002;AC=640;AN=2184 GT:DS:GL:BD 0.29304031 0
1 227187585 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0393;AVGPOST=0.9968;RSQ=0.9711;ERATE=0.0003;THETA=0.0004;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 227187609 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0055;AVGPOST=0.9980;RSQ=0.8382;ERATE=0.0005;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227187650 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.936;LDAF=0.1689;AVGPOST=0.9764;RSQ=0.9379;ERATE=0.0016;THETA=0.0003;AC=354;AN=2184 GT:DS:GL:BD 0.16208792 0
1 227187702 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.676;LDAF=0.0109;AVGPOST=0.9898;RSQ=0.6373;ERATE=0.0010;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 227187714 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.645;LDAF=0.0084;AVGPOST=0.9946;RSQ=0.7355;ERATE=0.0007;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227187896 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3113;AVGPOST=0.9979;RSQ=0.9959;ERATE=0.0005;THETA=0.0004;AC=677;AN=2184 GT:DS:GL:BD 0.30998167 0
1 227187930 . A AC 52 PASS INDEL;BAVGPOST=0.999;BRSQ=0.615;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.3909;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227188014 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0047;AVGPOST=0.9995;RSQ=0.9539;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227188199 . AC A 144 PASS INDEL;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6901;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227188371 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2953;AVGPOST=0.9988;RSQ=0.9978;ERATE=0.0003;THETA=0.0003;AC=644;AN=2184 GT:DS:GL:BD 0.29487181 0
1 227188549 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.743;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7882;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227188552 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0117;AVGPOST=0.9994;RSQ=0.9773;ERATE=0.0003;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227188575 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0029;AVGPOST=0.9985;RSQ=0.8538;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227188578 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9480;ERATE=0.0002;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227188616 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0116;AVGPOST=0.9996;RSQ=0.9869;ERATE=0.0003;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227188684 . TCCAA T 78 PASS INDEL;BAVGPOST=0.999;BRSQ=0.748;LDAF=0.0025;AVGPOST=0.9975;RSQ=0.6306;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227188727 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9654;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227188752 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0078;AVGPOST=0.9989;RSQ=0.9584;ERATE=0.0002;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 227188866 . CT C 78 PASS INDEL;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.6157;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227188966 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6471;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227188990 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6415;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227189004 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9882;ERATE=0.0002;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227189106 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3157;AVGPOST=0.9998;RSQ=0.9996;ERATE=0.0002;THETA=0.0004;AC=688;AN=2184 GT:DS:GL:BD 0.31501833 0
1 227189107 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0045;AVGPOST=0.9991;RSQ=0.9128;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227189124 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.6856;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227189180 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6008;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227189278 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9591;ERATE=0.0002;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227189287 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0048;AVGPOST=0.9982;RSQ=0.8666;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227189408 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.987;LDAF=0.3143;AVGPOST=0.9914;RSQ=0.9845;ERATE=0.0019;THETA=0.0003;AC=684;AN=2184 GT:DS:GL:BD 0.31318682 0
1 227189525 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.748;LDAF=0.0036;AVGPOST=0.9985;RSQ=0.8046;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227189642 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.985;LDAF=0.2960;AVGPOST=0.9953;RSQ=0.9922;ERATE=0.0004;THETA=0.0001;AC=644;AN=2184 GT:DS:GL:BD 0.29487181 0
1 227189651 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6920;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227189673 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5149;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227189676 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0116;AVGPOST=0.9997;RSQ=0.9887;ERATE=0.0003;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227189717 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.666;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5235;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227189803 . GTGTT G 187 PASS INDEL;BAVGPOST=0.999;BRSQ=0.717;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.7340;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227189811 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6714;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227189969 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3009;AVGPOST=0.9993;RSQ=0.9985;ERATE=0.0003;THETA=0.0004;AC=655;AN=2184 GT:DS:GL:BD 0.29990843 0
1 227190021 rs76771039 G GATA 140204 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9143;AVGPOST=0.9965;RSQ=0.9849;ERATE=0.0005;THETA=0.0005;AC=1996;AN=2184 GT:DS:GL:BD 0.91391939 1
1 227190183 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6366;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227190192 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0120;AVGPOST=0.9998;RSQ=0.9919;ERATE=0.0002;THETA=0.0001;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 227190233 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.2949;AVGPOST=0.9996;RSQ=0.9992;ERATE=0.0003;THETA=0.0006;AC=642;AN=2184 GT:DS:GL:BD 0.29395604 0
1 227190259 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0042;AVGPOST=0.9996;RSQ=0.9550;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227190456 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.9156;AVGPOST=0.9978;RSQ=0.9891;ERATE=0.0005;THETA=0.0004;AC=2001;AN=2184 GT:DS:GL:BD 0.91620880 1
1 227190490 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0019;AVGPOST=0.9991;RSQ=0.8317;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227190497 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3170;AVGPOST=0.9981;RSQ=0.9969;ERATE=0.0004;THETA=0.0003;AC=690;AN=2184 GT:DS:GL:BD 0.31593406 0
1 227190514 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0121;AVGPOST=0.9996;RSQ=0.9849;ERATE=0.0003;THETA=0.0002;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 227190516 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8580;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227190540 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9107;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227190580 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.7297;ERATE=0.0002;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227190716 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7882;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227190766 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0056;AVGPOST=0.9962;RSQ=0.7806;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227190804 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9983;RSQ=0.8776;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227190896 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0119;AVGPOST=0.9999;RSQ=0.9965;ERATE=0.0002;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 227191011 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.975;LDAF=0.0756;AVGPOST=0.9969;RSQ=0.9838;ERATE=0.0003;THETA=0.0003;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 227191060 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=0.9992;RSQ=0.9169;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227191065 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227191225 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0119;AVGPOST=0.9999;RSQ=0.9966;ERATE=0.0002;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 227191227 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.3004;AVGPOST=0.9985;RSQ=0.9975;ERATE=0.0003;THETA=0.0002;AC=655;AN=2184 GT:DS:GL:BD 0.29990843 0
1 227191403 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5842;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227191477 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0125;AVGPOST=0.9989;RSQ=0.9719;ERATE=0.0003;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 227191495 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.821;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6015;ERATE=0.0006;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227191497 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0040;AVGPOST=0.9979;RSQ=0.8226;ERATE=0.0003;THETA=0.0039;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227191510 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0032;AVGPOST=0.9996;RSQ=0.9483;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227191529 . AAAAC A 183 PASS INDEL;BAVGPOST=0.999;BRSQ=0.845;LDAF=0.0039;AVGPOST=0.9982;RSQ=0.7993;ERATE=0.0006;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227191539 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0036;AVGPOST=0.9997;RSQ=0.9617;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227191582 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227191611 . A AT 1656 PASS INDEL;BAVGPOST=0.994;BRSQ=0.807;LDAF=0.0164;AVGPOST=0.9947;RSQ=0.8794;ERATE=0.0003;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 227191637 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9574;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227191656 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.986;LDAF=0.1022;AVGPOST=0.9988;RSQ=0.9943;ERATE=0.0003;THETA=0.0007;AC=221;AN=2184 GT:DS:GL:BD 0.10119048 0
1 227191659 . T TA 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227191686 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.649;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5647;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227191828 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6646;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227191931 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.788;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9420;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227191959 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6942;ERATE=0.0003;THETA=0.0022;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227192028 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1426;AVGPOST=0.9991;RSQ=0.9971;ERATE=0.0005;THETA=0.0005;AC=310;AN=2184 GT:DS:GL:BD 0.14194140 0
1 227192036 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227192107 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.963;LDAF=0.0213;AVGPOST=0.9983;RSQ=0.9719;ERATE=0.0002;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 227192280 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1143;AVGPOST=0.9997;RSQ=0.9985;ERATE=0.0003;THETA=0.0002;AC=248;AN=2184 GT:DS:GL:BD 0.11355311 0
1 227192339 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7071;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227192468 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=1.0000;RSQ=0.9941;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227192469 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0489;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 227192477 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2638;AVGPOST=0.9995;RSQ=0.9989;ERATE=0.0002;THETA=0.0005;AC=576;AN=2184 GT:DS:GL:BD 0.26373628 0
1 227192579 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2998;AVGPOST=0.9999;RSQ=0.9998;ERATE=0.0002;THETA=0.0003;AC=653;AN=2184 GT:DS:GL:BD 0.29899266 0
1 227192609 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227192752 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0114;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227192826 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0002;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 227192852 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227193198 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9193;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227193269 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8608;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227193329 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8527;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227193353 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0028;AVGPOST=0.9976;RSQ=0.6580;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227193368 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0116;AVGPOST=0.9995;RSQ=0.9853;ERATE=0.0002;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227193396 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.895;LDAF=0.0093;AVGPOST=0.9991;RSQ=0.9597;ERATE=0.0003;THETA=0.0001;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 227193528 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7441;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227193667 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0117;AVGPOST=0.9995;RSQ=0.9810;ERATE=0.0003;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227193755 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0002;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227193812 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0045;AVGPOST=0.9997;RSQ=0.9722;ERATE=0.0002;THETA=0.0012;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227193830 . CATA C 7975 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0490;AVGPOST=0.9996;RSQ=0.9967;ERATE=0.0003;THETA=0.0002;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 227194011 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0087;AVGPOST=0.9997;RSQ=0.9855;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 227194056 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9498;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227194072 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0113;AVGPOST=0.9986;RSQ=0.9459;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 227194342 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.724;LDAF=0.0112;AVGPOST=0.9911;RSQ=0.6892;ERATE=0.0013;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 227194605 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.898;LDAF=0.0038;AVGPOST=0.9979;RSQ=0.7693;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227194623 rs56228532 ACTCACTCTG A 35154 PASS INDEL;BAVGPOST=0.815;BRSQ=0.690;LDAF=0.6082;AVGPOST=0.8001;RSQ=0.7096;ERATE=0.0269;THETA=0.0004;AC=1415;AN=2184 GT:DS:GL:BD 0.64789379 1
1 227194691 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.888;LDAF=0.0060;AVGPOST=0.9983;RSQ=0.8878;ERATE=0.0004;THETA=0.0010;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227194691 . A AACC 1076 PASS INDEL;BAVGPOST=0.962;BRSQ=0.683;LDAF=0.0929;AVGPOST=0.9234;RSQ=0.6352;ERATE=0.0245;THETA=0.0004;AC=148;AN=2184 GT:DS:GL:BD 0.06776557 0
1 227194720 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1291;AVGPOST=0.9988;RSQ=0.9954;ERATE=0.0003;THETA=0.0002;AC=282;AN=2184 GT:DS:GL:BD 0.12912089 0
1 227194779 . G GA 28 PASS INDEL;BAVGPOST=0.999;BRSQ=0.646;LDAF=0.0027;AVGPOST=0.9974;RSQ=0.5965;ERATE=0.0007;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227194814 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227194932 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0115;AVGPOST=0.9998;RSQ=0.9932;ERATE=0.0002;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227195067 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227195201 . ATG A 110 PASS INDEL;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0039;AVGPOST=0.9996;RSQ=0.9526;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227195279 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0377;AVGPOST=0.9996;RSQ=0.9955;ERATE=0.0003;THETA=0.0002;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 227195381 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0159;AVGPOST=0.9991;RSQ=0.9781;ERATE=0.0003;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 227195494 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9365;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227195500 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2999;AVGPOST=0.9992;RSQ=0.9984;ERATE=0.0004;THETA=0.0005;AC=653;AN=2184 GT:DS:GL:BD 0.29899266 0
1 227195559 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0115;AVGPOST=0.9998;RSQ=0.9929;ERATE=0.0002;THETA=0.0011;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227195595 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7301;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227195646 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6920;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227195664 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227195728 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3030;AVGPOST=0.9996;RSQ=0.9992;ERATE=0.0003;THETA=0.0003;AC=660;AN=2184 GT:DS:GL:BD 0.30219781 0
1 227195736 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227195758 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1284;AVGPOST=0.9991;RSQ=0.9965;ERATE=0.0002;THETA=0.0003;AC=281;AN=2184 GT:DS:GL:BD 0.12866300 0
1 227195841 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5296;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227195850 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9767;ERATE=0.0003;THETA=0.0011;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227195871 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2841;AVGPOST=0.9974;RSQ=0.9950;ERATE=0.0003;THETA=0.0002;AC=621;AN=2184 GT:DS:GL:BD 0.28434065 0
1 227195876 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3010;AVGPOST=0.9983;RSQ=0.9969;ERATE=0.0005;THETA=0.0006;AC=656;AN=2184 GT:DS:GL:BD 0.30036631 0
1 227195978 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6406;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227196048 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3016;AVGPOST=0.9985;RSQ=0.9972;ERATE=0.0004;THETA=0.0004;AC=657;AN=2184 GT:DS:GL:BD 0.30082417 0
1 227196131 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227196211 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2995;AVGPOST=0.9984;RSQ=0.9970;ERATE=0.0004;THETA=0.0002;AC=652;AN=2184 GT:DS:GL:BD 0.29853481 0
1 227196224 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5273;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227196459 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0079;AVGPOST=0.9998;RSQ=0.9888;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227196502 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2976;AVGPOST=0.9984;RSQ=0.9975;ERATE=0.0004;THETA=0.0005;AC=648;AN=2184 GT:DS:GL:BD 0.29670331 0
1 227196732 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8734;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227196744 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9390;ERATE=0.0003;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227196764 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.943;LDAF=0.0228;AVGPOST=0.9983;RSQ=0.9696;ERATE=0.0002;THETA=0.0002;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 227196804 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6125;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227196927 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0034;AVGPOST=0.9997;RSQ=0.9551;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227196940 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0155;AVGPOST=0.9998;RSQ=0.9954;ERATE=0.0002;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 227196949 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2994;AVGPOST=0.9989;RSQ=0.9977;ERATE=0.0004;THETA=0.0006;AC=652;AN=2184 GT:DS:GL:BD 0.29853481 0
1 227196965 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.762;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5496;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227196974 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0045;AVGPOST=0.9985;RSQ=0.8873;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227197067 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.728;LDAF=0.0028;AVGPOST=0.9961;RSQ=0.5328;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227197108 . GTTA G 8 PASS INDEL;BAVGPOST=0.999;BRSQ=0.691;LDAF=0.0073;AVGPOST=0.9919;RSQ=0.5699;ERATE=0.0024;THETA=0.0001;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227197178 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0040;AVGPOST=0.9989;RSQ=0.8946;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227197260 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5033;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227197282 . TTA T 80 PASS INDEL;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8749;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227197383 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.9156;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227197408 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2991;AVGPOST=0.9978;RSQ=0.9957;ERATE=0.0004;THETA=0.0002;AC=652;AN=2184 GT:DS:GL:BD 0.29853481 0
1 227197411 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3006;AVGPOST=0.9959;RSQ=0.9936;ERATE=0.0004;THETA=0.0003;AC=653;AN=2184 GT:DS:GL:BD 0.29899266 0
1 227197434 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9824;ERATE=0.0002;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227197475 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0040;AVGPOST=0.9992;RSQ=0.9194;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227197685 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3003;AVGPOST=0.9975;RSQ=0.9955;ERATE=0.0003;THETA=0.0005;AC=652;AN=2184 GT:DS:GL:BD 0.29853481 0
1 227197801 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5239;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227197854 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6619;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227197875 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2975;AVGPOST=0.9951;RSQ=0.9919;ERATE=0.0004;THETA=0.0004;AC=649;AN=2184 GT:DS:GL:BD 0.29716116 0
1 227198190 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.842;LDAF=0.0070;AVGPOST=0.9986;RSQ=0.9281;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 227198293 . CTT C 687 PASS INDEL;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0067;AVGPOST=0.9977;RSQ=0.8442;ERATE=0.0005;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 227198338 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.6927;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227198343 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0066;AVGPOST=0.9986;RSQ=0.9253;ERATE=0.0002;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227198433 . AAG A 6533 PASS INDEL;BAVGPOST=0.965;BRSQ=0.918;LDAF=0.2586;AVGPOST=0.9501;RSQ=0.9079;ERATE=0.0029;THETA=0.0006;AC=576;AN=2184 GT:DS:GL:BD 0.26373628 0
1 227198434 . AGAG A 46957 PASS INDEL;BAVGPOST=0.988;BRSQ=0.977;LDAF=0.2927;AVGPOST=0.9902;RSQ=0.9843;ERATE=0.0007;THETA=0.0003;AC=640;AN=2184 GT:DS:GL:BD 0.29304031 0
1 227198438 rs10584341 GAGA G 9898 PASS INDEL;BAVGPOST=0.990;BRSQ=0.978;LDAF=0.2926;AVGPOST=0.9908;RSQ=0.9852;ERATE=0.0004;THETA=0.0005;AC=639;AN=2184 GT:DS:GL:BD 0.29258242 0
1 227198468 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7873;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227198522 . CAA C 93 PASS INDEL;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6878;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227198536 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227198638 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0018;AVGPOST=1.0000;RSQ=0.9879;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227198711 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9858;ERATE=0.0002;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227198729 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8639;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227198737 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0061;AVGPOST=0.9996;RSQ=0.9685;ERATE=0.0002;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227198775 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1037;AVGPOST=0.9999;RSQ=0.9996;ERATE=0.0002;THETA=0.0004;AC=225;AN=2184 GT:DS:GL:BD 0.10302198 0
1 227198802 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.7246;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227198829 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5741;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227198860 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=1.0000;RSQ=0.9941;ERATE=0.0002;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227198868 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1039;AVGPOST=0.9997;RSQ=0.9987;ERATE=0.0002;THETA=0.0003;AC=225;AN=2184 GT:DS:GL:BD 0.10302198 0
1 227199170 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5265;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227199331 . GAC G 110 PASS INDEL;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.7789;ERATE=0.0004;THETA=0.0022;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227199404 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.3238;AVGPOST=0.9961;RSQ=0.9932;ERATE=0.0006;THETA=0.0008;AC=704;AN=2184 GT:DS:GL:BD 0.32234433 0
1 227199405 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9985;RSQ=0.8585;ERATE=0.0003;THETA=0.0012;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227199414 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.711;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6351;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227199514 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0035;AVGPOST=0.9992;RSQ=0.8928;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227199617 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8136;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227199665 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7811;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227199679 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0381;AVGPOST=0.9994;RSQ=0.9948;ERATE=0.0002;THETA=0.0031;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 227199696 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4928;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227199718 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.3110;AVGPOST=0.9986;RSQ=0.9973;ERATE=0.0005;THETA=0.0004;AC=678;AN=2184 GT:DS:GL:BD 0.31043956 0
1 227200018 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6162;ERATE=0.0003;THETA=0.0040;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227200059 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5407;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227200100 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.2850;AVGPOST=0.9983;RSQ=0.9966;ERATE=0.0004;THETA=0.0003;AC=623;AN=2184 GT:DS:GL:BD 0.28525642 0
1 227200168 . A AC 37506 PASS INDEL;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2771;AVGPOST=0.9951;RSQ=0.9909;ERATE=0.0009;THETA=0.0002;AC=601;AN=2184 GT:DS:GL:BD 0.27518314 0
1 227200169 . C CT 10256 PASS INDEL;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.2764;AVGPOST=0.9978;RSQ=0.9956;ERATE=0.0005;THETA=0.0004;AC=601;AN=2184 GT:DS:GL:BD 0.27518314 0
1 227200205 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6767;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227200510 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9882;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227200522 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9995;RSQ=0.9386;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227200542 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6310;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227200570 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1042;AVGPOST=0.9984;RSQ=0.9929;ERATE=0.0003;THETA=0.0003;AC=225;AN=2184 GT:DS:GL:BD 0.10302198 0
1 227200718 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.963;LDAF=0.9537;AVGPOST=0.9983;RSQ=0.9826;ERATE=0.0004;THETA=0.0023;AC=2083;AN=2184 GT:DS:GL:BD 0.95375460 1
1 227200846 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.6658;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227200939 . G GA 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6645;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227201030 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3191;AVGPOST=0.9986;RSQ=0.9971;ERATE=0.0005;THETA=0.0003;AC=695;AN=2184 GT:DS:GL:BD 0.31822345 0
1 227201105 . TC T 7851 PASS INDEL;BAVGPOST=0.905;BRSQ=0.792;LDAF=0.2605;AVGPOST=0.9165;RSQ=0.8517;ERATE=0.0091;THETA=0.0005;AC=582;AN=2184 GT:DS:GL:BD 0.26648352 0
1 227201106 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.964;LDAF=0.3115;AVGPOST=0.9830;RSQ=0.9728;ERATE=0.0011;THETA=0.0002;AC=681;AN=2184 GT:DS:GL:BD 0.31181318 0
1 227201291 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6705;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227201334 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0019;AVGPOST=0.9971;RSQ=0.4721;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227201449 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.3193;AVGPOST=0.9940;RSQ=0.9893;ERATE=0.0011;THETA=0.0005;AC=697;AN=2184 GT:DS:GL:BD 0.31913918 0
1 227201453 . ACTAT A 35 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9289;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227201539 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9993;RSQ=0.9253;ERATE=0.0004;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227201606 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.680;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.7313;ERATE=0.0003;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227201770 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3231;AVGPOST=0.9983;RSQ=0.9974;ERATE=0.0004;THETA=0.0004;AC=703;AN=2184 GT:DS:GL:BD 0.32188645 0
1 227201818 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5190;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227201822 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.975;LDAF=0.0647;AVGPOST=0.9949;RSQ=0.9701;ERATE=0.0003;THETA=0.0003;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 227201871 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.976;LDAF=0.3173;AVGPOST=0.9916;RSQ=0.9853;ERATE=0.0013;THETA=0.0005;AC=693;AN=2184 GT:DS:GL:BD 0.31730768 0
1 227201872 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0024;AVGPOST=0.9978;RSQ=0.6014;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227201922 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5327;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227201926 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6586;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227202185 . CTGAGA C 62 PASS INDEL;BAVGPOST=1.000;BRSQ=0.721;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4588;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227202482 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.737;LDAF=0.0039;AVGPOST=0.9982;RSQ=0.7872;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227202486 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6238;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227202567 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4129;AVGPOST=0.9985;RSQ=0.9975;ERATE=0.0002;THETA=0.0003;AC=902;AN=2184 GT:DS:GL:BD 0.41300365 0
1 227202577 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227202668 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3192;AVGPOST=0.9975;RSQ=0.9956;ERATE=0.0004;THETA=0.0004;AC=695;AN=2184 GT:DS:GL:BD 0.31822345 0
1 227202782 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3137;AVGPOST=0.9988;RSQ=0.9976;ERATE=0.0004;THETA=0.0005;AC=683;AN=2184 GT:DS:GL:BD 0.31272894 0
1 227202789 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3559;AVGPOST=0.9983;RSQ=0.9973;ERATE=0.0003;THETA=0.0004;AC=775;AN=2184 GT:DS:GL:BD 0.35485348 0
1 227202813 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0156;AVGPOST=0.9999;RSQ=0.9976;ERATE=0.0002;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 227202847 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0037;AVGPOST=0.9975;RSQ=0.7684;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227202857 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7728;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227202938 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.974;LDAF=0.0295;AVGPOST=0.9979;RSQ=0.9713;ERATE=0.0006;THETA=0.0028;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 227202961 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4387;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227203072 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0050;AVGPOST=0.9979;RSQ=0.8277;ERATE=0.0008;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227203182 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0018;AVGPOST=0.9999;RSQ=0.9762;ERATE=0.0002;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227203214 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.956;LDAF=0.2971;AVGPOST=0.9850;RSQ=0.9749;ERATE=0.0019;THETA=0.0023;AC=651;AN=2184 GT:DS:GL:BD 0.29807693 0
1 227203257 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.6352;ERATE=0.0002;THETA=0.0030;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227203319 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0033;AVGPOST=0.9996;RSQ=0.9483;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227203361 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.807;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8091;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227203390 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.967;LDAF=0.3344;AVGPOST=0.9762;RSQ=0.9624;ERATE=0.0060;THETA=0.0005;AC=735;AN=2184 GT:DS:GL:BD 0.33653846 0
1 227203550 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227203642 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1277;AVGPOST=0.9995;RSQ=0.9979;ERATE=0.0129;THETA=0.0006;AC=279;AN=2184 GT:DS:GL:BD 0.12774725 0
1 227203688 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0045;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227203747 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227203793 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0051;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227204052 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227204185 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.867;LDAF=0.0065;AVGPOST=0.9980;RSQ=0.8640;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227204221 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0026;AVGPOST=0.9982;RSQ=0.7574;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227204231 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3345;AVGPOST=0.9987;RSQ=0.9979;ERATE=0.0006;THETA=0.0003;AC=730;AN=2184 GT:DS:GL:BD 0.33424908 0
1 227204258 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6105;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227204372 rs11340205 TG T 38542 PASS INDEL;BAVGPOST=0.992;BRSQ=0.987;LDAF=0.3939;AVGPOST=0.9957;RSQ=0.9926;ERATE=0.0009;THETA=0.0002;AC=861;AN=2184 GT:DS:GL:BD 0.39423078 0
1 227204557 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.1644;AVGPOST=0.9998;RSQ=0.9995;ERATE=0.0002;THETA=0.0002;AC=359;AN=2184 GT:DS:GL:BD 0.16437729 0
1 227204559 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.8031;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227204795 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227204903 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8101;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227204908 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1032;AVGPOST=0.9997;RSQ=0.9987;ERATE=0.0002;THETA=0.0015;AC=226;AN=2184 GT:DS:GL:BD 0.10347985 0
1 227204915 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1173;AVGPOST=0.9993;RSQ=0.9973;ERATE=0.0002;THETA=0.0002;AC=256;AN=2184 GT:DS:GL:BD 0.11721612 0
1 227204953 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1645;AVGPOST=0.9995;RSQ=0.9986;ERATE=0.0003;THETA=0.0002;AC=359;AN=2184 GT:DS:GL:BD 0.16437729 0
1 227204960 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1644;AVGPOST=0.9994;RSQ=0.9983;ERATE=0.0003;THETA=0.0003;AC=359;AN=2184 GT:DS:GL:BD 0.16437729 0
1 227205117 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0156;AVGPOST=0.9998;RSQ=0.9952;ERATE=0.0002;THETA=0.0002;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 227205158 rs11303394 CA C 23286 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1658;AVGPOST=0.9976;RSQ=0.9940;ERATE=0.0004;THETA=0.0001;AC=362;AN=2184 GT:DS:GL:BD 0.16575092 0
1 227205263 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5650;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227205331 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3293;AVGPOST=0.9986;RSQ=0.9974;ERATE=0.0006;THETA=0.0005;AC=718;AN=2184 GT:DS:GL:BD 0.32875457 0
1 227205402 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4192;AVGPOST=0.9968;RSQ=0.9952;ERATE=0.0005;THETA=0.0002;AC=917;AN=2184 GT:DS:GL:BD 0.41987181 0
1 227205505 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7248;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227205605 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0075;AVGPOST=0.9992;RSQ=0.9520;ERATE=0.0004;THETA=0.0022;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 227205639 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0082;AVGPOST=0.9989;RSQ=0.9540;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227206038 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4762;AVGPOST=0.9971;RSQ=0.9954;ERATE=0.0004;THETA=0.0004;AC=1041;AN=2184 GT:DS:GL:BD 0.47664836 0
1 227206298 . G GA 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5863;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227206334 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0099;AVGPOST=0.9994;RSQ=0.9753;ERATE=0.0002;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 227206349 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2657;AVGPOST=0.9984;RSQ=0.9964;ERATE=0.0004;THETA=0.0002;AC=580;AN=2184 GT:DS:GL:BD 0.26556778 0
1 227206354 . C CT 2263 PASS INDEL;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0162;AVGPOST=0.9990;RSQ=0.9827;ERATE=0.0003;THETA=0.0002;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 227206401 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0041;AVGPOST=0.9997;RSQ=0.9686;ERATE=0.0002;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227206442 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.1271;AVGPOST=0.9989;RSQ=0.9959;ERATE=0.0003;THETA=0.0002;AC=278;AN=2184 GT:DS:GL:BD 0.12728938 0
1 227206450 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.538;LDAF=0.0022;AVGPOST=0.9980;RSQ=0.6087;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227206462 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6494;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227206492 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227206520 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0106;AVGPOST=0.9998;RSQ=0.9919;ERATE=0.0002;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 227206540 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0537;AVGPOST=0.9991;RSQ=0.9940;ERATE=0.0003;THETA=0.0003;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 227206595 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227206626 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6652;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227206634 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0077;AVGPOST=0.9992;RSQ=0.9546;ERATE=0.0005;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 227206708 . G GA 4234 PASS INDEL;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0166;AVGPOST=0.9986;RSQ=0.9694;ERATE=0.0003;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 227206951 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0152;AVGPOST=0.9986;RSQ=0.9704;ERATE=0.0003;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 227207069 . G GT 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0028;AVGPOST=0.9985;RSQ=0.7882;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227207153 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8544;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227207249 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9149;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227207286 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7814;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227207358 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0376;AVGPOST=0.9996;RSQ=0.9956;ERATE=0.0003;THETA=0.0007;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 227207481 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7344;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227207488 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7208;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227207520 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8893;ERATE=0.0002;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227207939 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227207951 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227208173 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8224;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227208265 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7802;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227208534 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7344;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227208563 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5212;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227208588 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7106;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227208621 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.4743;AVGPOST=0.9948;RSQ=0.9918;ERATE=0.0008;THETA=0.0006;AC=1038;AN=2184 GT:DS:GL:BD 0.47527471 0
1 227208637 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3181;AVGPOST=0.9986;RSQ=0.9976;ERATE=0.0003;THETA=0.0002;AC=695;AN=2184 GT:DS:GL:BD 0.31822345 0
1 227208662 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3971;AVGPOST=0.9969;RSQ=0.9954;ERATE=0.0005;THETA=0.0004;AC=866;AN=2184 GT:DS:GL:BD 0.39652014 0
1 227208846 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8336;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227208902 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0051;AVGPOST=1.0000;RSQ=0.9957;ERATE=0.0002;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227208935 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1694;AVGPOST=0.9996;RSQ=0.9988;ERATE=0.0002;THETA=0.0002;AC=370;AN=2184 GT:DS:GL:BD 0.16941392 0
1 227208970 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1606;AVGPOST=0.9991;RSQ=0.9970;ERATE=0.0004;THETA=0.0001;AC=350;AN=2184 GT:DS:GL:BD 0.16025642 0
1 227208973 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7855;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227208988 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227209039 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227209066 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=0.9987;RSQ=0.8893;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227209207 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0047;AVGPOST=0.9959;RSQ=0.6981;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227209217 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7029;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227209355 . AT A 60 PASS INDEL;BAVGPOST=0.977;BRSQ=0.433;LDAF=0.0415;AVGPOST=0.9441;RSQ=0.4579;ERATE=0.0102;THETA=0.0003;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 227209403 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8450;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227209415 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9360;ERATE=0.0004;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227209422 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1604;AVGPOST=0.9990;RSQ=0.9967;ERATE=0.0003;THETA=0.0002;AC=350;AN=2184 GT:DS:GL:BD 0.16025642 0
1 227209447 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.677;LDAF=0.0043;AVGPOST=0.9954;RSQ=0.5966;ERATE=0.0005;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227209459 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.749;LDAF=0.0183;AVGPOST=0.9838;RSQ=0.6524;ERATE=0.0020;THETA=0.0001;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 227209524 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0125;AVGPOST=0.9986;RSQ=0.9537;ERATE=0.0003;THETA=0.0002;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 227209547 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0106;AVGPOST=0.9942;RSQ=0.8005;ERATE=0.0006;THETA=0.0001;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 227209552 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.987;LDAF=0.3971;AVGPOST=0.9903;RSQ=0.9843;ERATE=0.0014;THETA=0.0005;AC=868;AN=2184 GT:DS:GL:BD 0.39743590 0
1 227209591 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.971;LDAF=0.1702;AVGPOST=0.9922;RSQ=0.9793;ERATE=0.0009;THETA=0.0002;AC=370;AN=2184 GT:DS:GL:BD 0.16941392 0
1 227209693 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.976;LDAF=0.1644;AVGPOST=0.9931;RSQ=0.9820;ERATE=0.0007;THETA=0.0007;AC=356;AN=2184 GT:DS:GL:BD 0.16300367 0
1 227209707 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.792;LDAF=0.0030;AVGPOST=0.9973;RSQ=0.6386;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227209714 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.668;LDAF=0.0022;AVGPOST=0.9991;RSQ=0.8234;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227209724 . GC G 102 PASS INDEL;BAVGPOST=0.957;BRSQ=0.405;LDAF=0.0699;AVGPOST=0.9033;RSQ=0.4336;ERATE=0.0138;THETA=0.0006;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 227209736 rs60059546 T TA 38345 PASS INDEL;BAVGPOST=0.939;BRSQ=0.678;LDAF=0.8907;AVGPOST=0.9306;RSQ=0.7314;ERATE=0.0087;THETA=0.0002;AC=1971;AN=2184 GT:DS:GL:BD 0.90247256 1
1 227209785 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3965;AVGPOST=0.9950;RSQ=0.9916;ERATE=0.0012;THETA=0.0004;AC=864;AN=2184 GT:DS:GL:BD 0.39560440 0
1 227210085 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.631;LDAF=0.0033;AVGPOST=0.9980;RSQ=0.7765;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227210125 . CT C 1772 PASS INDEL;BAVGPOST=0.898;BRSQ=0.774;LDAF=0.2575;AVGPOST=0.9264;RSQ=0.8684;ERATE=0.0043;THETA=0.0003;AC=576;AN=2184 GT:DS:GL:BD 0.26373628 0
1 227210126 rs71912704 TC T 22546 PASS INDEL;BAVGPOST=0.958;BRSQ=0.914;LDAF=0.3082;AVGPOST=0.9781;RSQ=0.9644;ERATE=0.0007;THETA=0.0002;AC=676;AN=2184 GT:DS:GL:BD 0.30952382 0
1 227210197 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0077;AVGPOST=0.9995;RSQ=0.9733;ERATE=0.0003;THETA=0.0001;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227210242 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5797;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227210290 . TA T 42 PASS INDEL;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0019;AVGPOST=0.9975;RSQ=0.5157;ERATE=0.0003;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227210301 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6231;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227210325 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6661;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227210327 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9882;ERATE=0.0002;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227210357 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9763;ERATE=0.0002;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227210445 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227210571 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8470;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227210584 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227210605 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.624;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8552;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227210688 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9905;ERATE=0.0002;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227210712 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0023;AVGPOST=0.9995;RSQ=0.9100;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227210747 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227210769 . CA C 1255 PASS INDEL;BAVGPOST=0.997;BRSQ=0.926;LDAF=0.0156;AVGPOST=0.9962;RSQ=0.9052;ERATE=0.0003;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 227210774 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227210820 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3172;AVGPOST=0.9998;RSQ=0.9996;ERATE=0.0002;THETA=0.0004;AC=692;AN=2184 GT:DS:GL:BD 0.31684983 0
1 227210882 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0375;AVGPOST=0.9999;RSQ=0.9985;ERATE=0.0002;THETA=0.0006;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 227210888 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3172;AVGPOST=0.9999;RSQ=0.9998;ERATE=0.0003;THETA=0.0009;AC=692;AN=2184 GT:DS:GL:BD 0.31684983 0
1 227210914 rs72341727 AAAT A 4509 PASS INDEL;BAVGPOST=0.994;BRSQ=0.928;LDAF=0.0363;AVGPOST=0.9962;RSQ=0.9650;ERATE=0.0004;THETA=0.0004;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 227211060 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227211201 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.725;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227211208 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227211506 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9906;AVGPOST=0.9995;RSQ=0.9786;ERATE=0.0004;THETA=0.0002;AC=2164;AN=2184 GT:DS:GL:BD 0.99084246 1
1 227211710 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9365;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227211725 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.689;LDAF=0.0018;AVGPOST=0.9985;RSQ=0.7202;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227211782 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0041;AVGPOST=0.9980;RSQ=0.7876;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227211873 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0155;AVGPOST=0.9998;RSQ=0.9951;ERATE=0.0002;THETA=0.0002;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 227212005 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7393;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227212024 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.1398;AVGPOST=0.9983;RSQ=0.9944;ERATE=0.0002;THETA=0.0005;AC=305;AN=2184 GT:DS:GL:BD 0.13965201 0
1 227212069 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9735;ERATE=0.0002;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227212135 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9738;ERATE=0.0003;THETA=0.0019;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227212136 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1641;AVGPOST=0.9992;RSQ=0.9976;ERATE=0.0003;THETA=0.0003;AC=358;AN=2184 GT:DS:GL:BD 0.16391942 0
1 227212268 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6746;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227212366 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.1646;AVGPOST=0.9984;RSQ=0.9951;ERATE=0.0004;THETA=0.0004;AC=358;AN=2184 GT:DS:GL:BD 0.16391942 0
1 227212377 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0375;AVGPOST=0.9998;RSQ=0.9975;ERATE=0.0003;THETA=0.0003;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 227212456 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227212516 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1679;AVGPOST=0.9990;RSQ=0.9970;ERATE=0.0005;THETA=0.0002;AC=366;AN=2184 GT:DS:GL:BD 0.16758242 0
1 227212578 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0018;AVGPOST=0.9980;RSQ=0.5810;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227212601 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0078;AVGPOST=0.9994;RSQ=0.9704;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227212669 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.9206;AVGPOST=0.9987;RSQ=0.9918;ERATE=0.0003;THETA=0.0002;AC=2011;AN=2184 GT:DS:GL:BD 0.92078757 1
1 227212691 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.967;LDAF=0.1628;AVGPOST=0.9945;RSQ=0.9848;ERATE=0.0007;THETA=0.0005;AC=357;AN=2184 GT:DS:GL:BD 0.16346154 0
1 227212699 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.946;LDAF=0.1635;AVGPOST=0.9945;RSQ=0.9852;ERATE=0.0004;THETA=0.0003;AC=360;AN=2184 GT:DS:GL:BD 0.16483517 0
1 227212885 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0095;AVGPOST=0.9973;RSQ=0.9026;ERATE=0.0004;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 227212931 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0110;AVGPOST=0.9989;RSQ=0.9584;ERATE=0.0003;THETA=0.0011;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 227212995 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1305;AVGPOST=0.9984;RSQ=0.9942;ERATE=0.0004;THETA=0.0002;AC=285;AN=2184 GT:DS:GL:BD 0.13049451 0
1 227213043 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9995;RSQ=0.9397;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227213175 . CATCT C 140 PASS INDEL;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0032;AVGPOST=0.9969;RSQ=0.5894;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227213224 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4778;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227213248 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5972;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227213410 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8116;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227213500 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0014;AVGPOST=0.9993;RSQ=0.7881;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227213600 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0195;AVGPOST=0.9994;RSQ=0.9885;ERATE=0.0002;THETA=0.0002;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 227213609 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=1.0000;RSQ=0.9941;ERATE=0.0002;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227213737 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227213743 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0002;THETA=0.0023;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 227213831 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0007;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227213869 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0041;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227213968 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3293;AVGPOST=0.9992;RSQ=0.9987;ERATE=0.0002;THETA=0.0002;AC=719;AN=2184 GT:DS:GL:BD 0.32921246 0
1 227214024 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0001;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227214153 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1305;AVGPOST=0.9991;RSQ=0.9968;ERATE=0.0002;THETA=0.0006;AC=285;AN=2184 GT:DS:GL:BD 0.13049451 0
1 227214197 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9882;ERATE=0.0002;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227214233 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0026;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227214235 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6966;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227214251 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=1.0000;RSQ=0.9941;ERATE=0.0002;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227214311 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227214364 . TTTAC T 197 PASS INDEL;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.6145;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227214398 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.972;LDAF=0.3097;AVGPOST=0.9837;RSQ=0.9750;ERATE=0.0013;THETA=0.0003;AC=676;AN=2184 GT:DS:GL:BD 0.30952382 0
1 227214399 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.971;LDAF=0.3113;AVGPOST=0.9868;RSQ=0.9799;ERATE=0.0004;THETA=0.0026;AC=680;AN=2184 GT:DS:GL:BD 0.31135532 0
1 227214456 . AATT A 1108 PASS INDEL;BAVGPOST=0.997;BRSQ=0.816;LDAF=0.0099;AVGPOST=0.9959;RSQ=0.8383;ERATE=0.0003;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 227214566 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2646;AVGPOST=0.9976;RSQ=0.9955;ERATE=0.0003;THETA=0.0009;AC=578;AN=2184 GT:DS:GL:BD 0.26465201 0
1 227214591 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0014;AVGPOST=0.9979;RSQ=0.4468;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227214731 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.666;LDAF=0.0020;AVGPOST=0.9974;RSQ=0.5401;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227214737 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.799;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9424;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227214745 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.956;LDAF=0.3016;AVGPOST=0.9766;RSQ=0.9607;ERATE=0.0030;THETA=0.0003;AC=651;AN=2184 GT:DS:GL:BD 0.29807693 0
1 227214749 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.796;LDAF=0.0028;AVGPOST=0.9986;RSQ=0.8137;ERATE=0.0002;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227214762 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9614;ERATE=0.0002;THETA=0.0056;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227214805 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227214833 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.7841;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227214840 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7663;ERATE=0.0002;THETA=0.0049;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227214901 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0013;AVGPOST=0.9999;RSQ=0.9516;ERATE=0.0003;THETA=0.0019;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227214909 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0175;AVGPOST=0.9974;RSQ=0.9417;ERATE=0.0002;THETA=0.0004;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 227214936 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8627;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227214943 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0076;AVGPOST=0.9993;RSQ=0.9587;ERATE=0.0003;THETA=0.0022;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 227214971 . TTTC T 711 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0045;AVGPOST=0.9993;RSQ=0.9223;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227215185 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.854;LDAF=0.0074;AVGPOST=0.9988;RSQ=0.9229;ERATE=0.0004;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 227215195 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6695;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227215203 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9537;ERATE=0.0003;THETA=0.0031;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227215222 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.982;LDAF=0.9031;AVGPOST=0.9973;RSQ=0.9879;ERATE=0.0003;THETA=0.0005;AC=1973;AN=2184 GT:DS:GL:BD 0.90338826 1
1 227215276 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227215490 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.942;LDAF=0.0390;AVGPOST=0.9954;RSQ=0.9584;ERATE=0.0003;THETA=0.0010;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 227215537 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.977;LDAF=0.1715;AVGPOST=0.9913;RSQ=0.9760;ERATE=0.0023;THETA=0.0053;AC=373;AN=2184 GT:DS:GL:BD 0.17078754 0
1 227215543 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9713;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227215714 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.857;LDAF=0.0063;AVGPOST=0.9973;RSQ=0.8246;ERATE=0.0005;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227215770 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.932;BRSQ=0.860;LDAF=0.6926;AVGPOST=0.9004;RSQ=0.8303;ERATE=0.0545;THETA=0.0003;AC=1544;AN=2184 GT:DS:GL:BD 0.70695972 1
1 227215932 . A AT 250 PASS INDEL;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9069;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227215944 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0036;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227215967 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.961;LDAF=0.0242;AVGPOST=0.9986;RSQ=0.9754;ERATE=0.0003;THETA=0.0004;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 227216293 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227216305 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0055;AVGPOST=1.0000;RSQ=0.9966;ERATE=0.0002;THETA=0.0044;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227216481 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0080;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227216653 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0002;THETA=0.0043;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227216662 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4570;AVGPOST=1.0000;RSQ=0.9999;ERATE=0.0002;THETA=0.0028;AC=999;AN=2184 GT:DS:GL:BD 0.45741758 0
1 227216678 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227216775 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3327;AVGPOST=1.0000;RSQ=0.9999;ERATE=0.0002;THETA=0.0002;AC=727;AN=2184 GT:DS:GL:BD 0.33287546 0
1 227216815 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0009;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227216827 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227216930 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227217005 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1299;AVGPOST=0.9999;RSQ=0.9995;ERATE=0.0002;THETA=0.0002;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 227217105 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9882;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227217173 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0034;AVGPOST=0.9997;RSQ=0.9565;ERATE=0.0002;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227217230 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9009;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227217248 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9467;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227217320 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0393;AVGPOST=0.9990;RSQ=0.9904;ERATE=0.0005;THETA=0.0003;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 227217340 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1296;AVGPOST=0.9980;RSQ=0.9924;ERATE=0.0005;THETA=0.0004;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 227217355 rs72003742 AACTTAGAAT A 17568 PASS INDEL;BAVGPOST=0.992;BRSQ=0.967;LDAF=0.1318;AVGPOST=0.9944;RSQ=0.9815;ERATE=0.0005;THETA=0.0009;AC=288;AN=2184 GT:DS:GL:BD 0.13186814 0
1 227217412 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1704;AVGPOST=0.9986;RSQ=0.9960;ERATE=0.0003;THETA=0.0003;AC=371;AN=2184 GT:DS:GL:BD 0.16987179 0
1 227217525 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.820;LDAF=0.0050;AVGPOST=0.9980;RSQ=0.8499;ERATE=0.0002;THETA=0.0001;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227217553 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0084;AVGPOST=0.9988;RSQ=0.9472;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227217611 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.825;LDAF=0.0079;AVGPOST=0.9980;RSQ=0.9034;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227217633 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2189;AVGPOST=0.9916;RSQ=0.9800;ERATE=0.0013;THETA=0.0003;AC=472;AN=2184 GT:DS:GL:BD 0.21611722 0
1 227217665 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.977;LDAF=0.4479;AVGPOST=0.9787;RSQ=0.9673;ERATE=0.0019;THETA=0.0003;AC=985;AN=2184 GT:DS:GL:BD 0.45100734 0
1 227217725 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.945;LDAF=0.1255;AVGPOST=0.9960;RSQ=0.9849;ERATE=0.0005;THETA=0.0002;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 227217752 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0112;AVGPOST=0.9995;RSQ=0.9800;ERATE=0.0003;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 227217786 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.984;LDAF=0.4541;AVGPOST=0.9934;RSQ=0.9896;ERATE=0.0005;THETA=0.0002;AC=995;AN=2184 GT:DS:GL:BD 0.45558608 0
1 227217789 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.946;LDAF=0.0636;AVGPOST=0.9977;RSQ=0.9838;ERATE=0.0003;THETA=0.0002;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 227217867 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.7576;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227217905 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1898;AVGPOST=0.9995;RSQ=0.9986;ERATE=0.0003;THETA=0.0003;AC=415;AN=2184 GT:DS:GL:BD 0.19001831 0
1 227217973 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227218065 . A AAC 17801 PASS INDEL;BAVGPOST=0.996;BRSQ=0.985;LDAF=0.8402;AVGPOST=0.9840;RSQ=0.9544;ERATE=0.0014;THETA=0.0005;AC=1841;AN=2184 GT:DS:GL:BD 0.84294873 1
1 227218095 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227218099 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227218179 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0050;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0001;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227218215 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227218378 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227218442 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9797;ERATE=0.0002;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227218446 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.859;LDAF=0.0042;AVGPOST=0.9989;RSQ=0.9209;ERATE=0.0002;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227218507 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8470;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227218515 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1179;AVGPOST=0.9983;RSQ=0.9929;ERATE=0.0004;THETA=0.0002;AC=257;AN=2184 GT:DS:GL:BD 0.11767399 0
1 227218525 . A ATCC 391 PASS INDEL;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7740;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227218545 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1299;AVGPOST=0.9997;RSQ=0.9987;ERATE=0.0003;THETA=0.0014;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 227218664 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8501;AVGPOST=0.9998;RSQ=0.9991;ERATE=0.0003;THETA=0.0001;AC=1857;AN=2184 GT:DS:GL:BD 0.85027474 1
1 227218676 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0048;AVGPOST=0.9996;RSQ=0.9592;ERATE=0.0002;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227218708 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7831;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227218986 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0146;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 227219076 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0110;AVGPOST=0.9999;RSQ=0.9963;ERATE=0.0002;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 227219083 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227219204 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227219270 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0147;AVGPOST=0.9998;RSQ=0.9942;ERATE=0.0002;THETA=0.0002;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 227219305 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0293;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 227219314 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3236;AVGPOST=1.0000;RSQ=0.9999;ERATE=0.0002;THETA=0.0003;AC=708;AN=2184 GT:DS:GL:BD 0.32417583 0
1 227219412 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1243;AVGPOST=0.9998;RSQ=0.9993;ERATE=0.0003;THETA=0.0004;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 227219504 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8316;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227219594 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0206;AVGPOST=0.9999;RSQ=0.9971;ERATE=0.0002;THETA=0.0002;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 227219685 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.8515;AVGPOST=0.9995;RSQ=0.9983;ERATE=0.0003;THETA=0.0005;AC=1860;AN=2184 GT:DS:GL:BD 0.85164833 1
1 227219693 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3340;AVGPOST=0.9989;RSQ=0.9980;ERATE=0.0003;THETA=0.0002;AC=730;AN=2184 GT:DS:GL:BD 0.33424908 0
1 227219785 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6939;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227219865 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1633;AVGPOST=0.9987;RSQ=0.9960;ERATE=0.0006;THETA=0.0003;AC=357;AN=2184 GT:DS:GL:BD 0.16346154 0
1 227219984 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.6227;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227220100 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6318;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227220118 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9670;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227220175 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6577;AVGPOST=0.9992;RSQ=0.9983;ERATE=0.0004;THETA=0.0003;AC=1436;AN=2184 GT:DS:GL:BD 0.65750915 1
1 227220217 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7329;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227220242 . ATTC A 26 PASS INDEL;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4705;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227220318 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0104;AVGPOST=0.9995;RSQ=0.9839;ERATE=0.0002;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 227220408 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1699;AVGPOST=0.9990;RSQ=0.9969;ERATE=0.0005;THETA=0.0002;AC=371;AN=2184 GT:DS:GL:BD 0.16987179 0
1 227220429 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8702;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227220437 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0361;AVGPOST=0.9999;RSQ=0.9982;ERATE=0.0002;THETA=0.0002;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 227220444 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0394;AVGPOST=0.9989;RSQ=0.9891;ERATE=0.0003;THETA=0.0003;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 227220473 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1698;AVGPOST=0.9989;RSQ=0.9969;ERATE=0.0002;THETA=0.0004;AC=371;AN=2184 GT:DS:GL:BD 0.16987179 0
1 227220489 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227220521 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8667;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227220528 . T TGG 255 PASS INDEL;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0008;AVGPOST=0.9985;RSQ=0.1275;ERATE=0.0004;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 227220531 . TC T 141 PASS INDEL;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0007;AVGPOST=0.9986;RSQ=0.2035;ERATE=0.0004;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 227220584 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227220626 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2949;AVGPOST=0.9988;RSQ=0.9975;ERATE=0.0004;THETA=0.0002;AC=644;AN=2184 GT:DS:GL:BD 0.29487181 0
1 227220668 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.872;LDAF=0.0042;AVGPOST=0.9978;RSQ=0.7931;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227220719 . T TA 650 PASS INDEL;BAVGPOST=0.998;BRSQ=0.914;LDAF=0.0088;AVGPOST=0.9960;RSQ=0.8257;ERATE=0.0007;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227220853 . C CTT 28 PASS INDEL;BAVGPOST=1.000;BRSQ=0.711;LDAF=0.0045;AVGPOST=0.9951;RSQ=0.6017;ERATE=0.0005;THETA=0.0012;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227221123 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1651;AVGPOST=0.9999;RSQ=0.9995;ERATE=0.0003;THETA=0.0003;AC=361;AN=2184 GT:DS:GL:BD 0.16529304 0
1 227221159 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.8497;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227221222 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1302;AVGPOST=0.9999;RSQ=0.9995;ERATE=0.0003;THETA=0.0004;AC=285;AN=2184 GT:DS:GL:BD 0.13049451 0
1 227221239 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1475;AVGPOST=0.9975;RSQ=0.9929;ERATE=0.0005;THETA=0.0004;AC=320;AN=2184 GT:DS:GL:BD 0.14652015 0
1 227221251 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.2146;AVGPOST=0.9989;RSQ=0.9971;ERATE=0.0003;THETA=0.0001;AC=468;AN=2184 GT:DS:GL:BD 0.21428572 0
1 227221376 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7215;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227221425 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5584;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227221505 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1703;AVGPOST=0.9994;RSQ=0.9985;ERATE=0.0002;THETA=0.0004;AC=371;AN=2184 GT:DS:GL:BD 0.16987179 0
1 227221550 . GT G 1369 PASS INDEL;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0079;AVGPOST=0.9998;RSQ=0.9888;ERATE=0.0002;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227221580 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0021;AVGPOST=0.9980;RSQ=0.5995;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227221640 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9312;ERATE=0.0002;THETA=0.0001;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227221641 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8166;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227221683 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0326;AVGPOST=0.9997;RSQ=0.9962;ERATE=0.0002;THETA=0.0004;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 227221715 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2952;AVGPOST=0.9972;RSQ=0.9943;ERATE=0.0007;THETA=0.0006;AC=643;AN=2184 GT:DS:GL:BD 0.29441392 0
1 227221803 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0642;AVGPOST=0.9996;RSQ=0.9976;ERATE=0.0002;THETA=0.0005;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 227221880 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1408;AVGPOST=0.9999;RSQ=0.9997;ERATE=0.0002;THETA=0.0002;AC=308;AN=2184 GT:DS:GL:BD 0.14102565 0
1 227221923 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1243;AVGPOST=0.9999;RSQ=0.9994;ERATE=0.0002;THETA=0.0001;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 227222017 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0650;AVGPOST=0.9995;RSQ=0.9963;ERATE=0.0003;THETA=0.0004;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 227222042 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227222049 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0008;AVGPOST=0.9998;RSQ=0.8876;ERATE=0.0002;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227222125 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1252;AVGPOST=0.9990;RSQ=0.9969;ERATE=0.0003;THETA=0.0004;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 227222149 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7651;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227222194 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0648;AVGPOST=0.9998;RSQ=0.9987;ERATE=0.0002;THETA=0.0007;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 227222227 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227222261 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9709;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227222263 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0389;AVGPOST=1.0000;RSQ=0.9995;ERATE=0.0002;THETA=0.0004;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 227222330 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227222553 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227222563 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227222617 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1197;AVGPOST=1.0000;RSQ=0.9998;ERATE=0.0002;THETA=0.0002;AC=262;AN=2184 GT:DS:GL:BD 0.11996337 0
1 227222771 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0041;AVGPOST=1.0000;RSQ=0.9947;ERATE=0.0002;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227222953 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227222955 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227222963 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1250;AVGPOST=0.9996;RSQ=0.9984;ERATE=0.0002;THETA=0.0002;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 227223041 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0186;AVGPOST=0.9994;RSQ=0.9858;ERATE=0.0003;THETA=0.0004;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 227223108 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227223200 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227223208 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=1.0000;RSQ=0.9920;ERATE=0.0002;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227223317 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227223367 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1298;AVGPOST=0.9999;RSQ=0.9996;ERATE=0.0002;THETA=0.0003;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 227223399 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0110;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 227223516 . G GA 23 PASS INDEL;BAVGPOST=1.000;BRSQ=0.729;LDAF=0.0014;AVGPOST=0.9992;RSQ=0.7668;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227223580 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1301;AVGPOST=0.9997;RSQ=0.9989;ERATE=0.0002;THETA=0.0002;AC=285;AN=2184 GT:DS:GL:BD 0.13049451 0
1 227223736 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5333;AVGPOST=0.9979;RSQ=0.9967;ERATE=0.0005;THETA=0.0004;AC=1164;AN=2184 GT:DS:GL:BD 0.53296703 1
1 227223957 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.941;LDAF=0.0072;AVGPOST=0.9988;RSQ=0.9338;ERATE=0.0003;THETA=0.0008;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 227223973 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1244;AVGPOST=0.9997;RSQ=0.9987;ERATE=0.0002;THETA=0.0001;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 227224059 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1244;AVGPOST=0.9988;RSQ=0.9952;ERATE=0.0005;THETA=0.0005;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 227224153 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.403;LDAF=0.0169;AVGPOST=0.9784;RSQ=0.4875;ERATE=0.0013;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 227224185 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.957;BRSQ=0.898;LDAF=0.2955;AVGPOST=0.9667;RSQ=0.9391;ERATE=0.0025;THETA=0.0016;AC=644;AN=2184 GT:DS:GL:BD 0.29487181 0
1 227224198 . C CG 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.5488;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227224219 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.872;LDAF=0.1237;AVGPOST=0.9923;RSQ=0.9736;ERATE=0.0007;THETA=0.0004;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 227224256 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.926;BRSQ=0.776;LDAF=0.2048;AVGPOST=0.9380;RSQ=0.8645;ERATE=0.0011;THETA=0.0002;AC=452;AN=2184 GT:DS:GL:BD 0.20695971 0
1 227224259 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.935;BRSQ=0.533;LDAF=0.0850;AVGPOST=0.9427;RSQ=0.7466;ERATE=0.0004;THETA=0.0009;AC=188;AN=2184 GT:DS:GL:BD 0.08608059 0
1 227224291 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.955;BRSQ=0.843;LDAF=0.1597;AVGPOST=0.9839;RSQ=0.9542;ERATE=0.0007;THETA=0.0003;AC=355;AN=2184 GT:DS:GL:BD 0.16254579 0
1 227224365 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.975;LDAF=0.1254;AVGPOST=0.9966;RSQ=0.9880;ERATE=0.0007;THETA=0.0002;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 227224377 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0065;AVGPOST=0.9954;RSQ=0.6909;ERATE=0.0005;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227224410 rs111629013 GT G 4892 PASS INDEL;BAVGPOST=0.971;BRSQ=0.873;LDAF=0.1130;AVGPOST=0.9819;RSQ=0.9412;ERATE=0.0007;THETA=0.0003;AC=249;AN=2184 GT:DS:GL:BD 0.11401099 0
1 227224414 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.945;LDAF=0.0330;AVGPOST=0.9976;RSQ=0.9682;ERATE=0.0005;THETA=0.0014;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 227224423 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.962;LDAF=0.1236;AVGPOST=0.9931;RSQ=0.9771;ERATE=0.0005;THETA=0.0004;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 227224452 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.5837;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227224499 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0131;AVGPOST=0.9993;RSQ=0.9786;ERATE=0.0002;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 227224660 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7816;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227224661 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227224680 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0034;AVGPOST=0.9984;RSQ=0.8188;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227224956 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0116;AVGPOST=0.9988;RSQ=0.9626;ERATE=0.0003;THETA=0.0012;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 227225007 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9558;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227225181 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6930;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227225252 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227225356 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2944;AVGPOST=0.9988;RSQ=0.9973;ERATE=0.0003;THETA=0.0007;AC=643;AN=2184 GT:DS:GL:BD 0.29441392 0
1 227225440 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7213;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227225636 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7995;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227225857 . C CA 263 PASS INDEL;BAVGPOST=0.977;BRSQ=0.555;LDAF=0.0300;AVGPOST=0.9757;RSQ=0.6929;ERATE=0.0047;THETA=0.0003;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 227225879 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.968;LDAF=0.1779;AVGPOST=0.9916;RSQ=0.9783;ERATE=0.0006;THETA=0.0003;AC=382;AN=2184 GT:DS:GL:BD 0.17490843 0
1 227225925 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7577;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227225930 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0108;AVGPOST=0.9994;RSQ=0.9756;ERATE=0.0003;THETA=0.0007;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 227225948 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.734;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5382;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227226072 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0380;AVGPOST=0.9995;RSQ=0.9952;ERATE=0.0002;THETA=0.0003;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 227226131 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1244;AVGPOST=0.9996;RSQ=0.9986;ERATE=0.0002;THETA=0.0009;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 227226201 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0326;AVGPOST=0.9995;RSQ=0.9933;ERATE=0.0003;THETA=0.0003;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 227226260 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0325;AVGPOST=0.9999;RSQ=0.9980;ERATE=0.0002;THETA=0.0004;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 227226376 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0105;AVGPOST=0.9999;RSQ=0.9942;ERATE=0.0002;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 227226400 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.7936;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227226540 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0641;AVGPOST=0.9999;RSQ=0.9990;ERATE=0.0002;THETA=0.0003;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 227226625 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8311;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227226657 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9107;ERATE=0.0002;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227226672 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227226710 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0057;AVGPOST=0.9987;RSQ=0.9149;ERATE=0.0002;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227226836 . CTTCT C 851 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9829;ERATE=0.0003;THETA=0.0001;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227226845 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0033;AVGPOST=0.9996;RSQ=0.9469;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227226873 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0031;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227227074 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.705;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5365;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227227096 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1299;AVGPOST=0.9988;RSQ=0.9957;ERATE=0.0004;THETA=0.0002;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 227227159 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0020;AVGPOST=0.9994;RSQ=0.8609;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227227252 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.729;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4843;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227227425 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1304;AVGPOST=0.9989;RSQ=0.9960;ERATE=0.0003;THETA=0.0003;AC=285;AN=2184 GT:DS:GL:BD 0.13049451 0
1 227227574 rs33972530 A AGATG 41314 PASS INDEL;BAVGPOST=0.949;BRSQ=0.851;LDAF=0.7942;AVGPOST=0.9250;RSQ=0.8198;ERATE=0.0126;THETA=0.0003;AC=1767;AN=2184 GT:DS:GL:BD 0.80906594 1
1 227227575 rs72311025 G GATA 29885 PASS INDEL;BAVGPOST=0.943;BRSQ=0.839;LDAF=0.7477;AVGPOST=0.8796;RSQ=0.7407;ERATE=0.0385;THETA=0.0004;AC=1693;AN=2184 GT:DS:GL:BD 0.77518314 1
1 227227624 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0107;AVGPOST=0.9997;RSQ=0.9874;ERATE=0.0002;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 227227662 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0039;AVGPOST=0.9990;RSQ=0.8989;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227227740 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2226;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=485;AN=2184 GT:DS:GL:BD 0.22206959 0
1 227227798 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227227960 . AAC A 202 PASS INDEL;BAVGPOST=0.999;BRSQ=0.680;LDAF=0.0032;AVGPOST=0.9971;RSQ=0.6349;ERATE=0.0006;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227227977 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227228037 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0649;AVGPOST=1.0000;RSQ=0.9996;ERATE=0.0002;THETA=0.0002;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 227228080 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9999;RSQ=0.9914;ERATE=0.0002;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 227228228 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6646;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227228251 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1245;AVGPOST=0.9996;RSQ=0.9985;ERATE=0.0003;THETA=0.0005;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 227228363 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0113;AVGPOST=0.9988;RSQ=0.9612;ERATE=0.0004;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 227228370 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0216;AVGPOST=0.9978;RSQ=0.9604;ERATE=0.0005;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 227228397 . T TG 6 PASS INDEL;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.6851;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227228451 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.735;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7891;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227228591 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1245;AVGPOST=0.9992;RSQ=0.9967;ERATE=0.0004;THETA=0.0005;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 227228633 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0047;AVGPOST=0.9995;RSQ=0.9550;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227228801 . A AC 11 PASS INDEL;BAVGPOST=0.999;BRSQ=0.621;LDAF=0.0016;AVGPOST=0.9982;RSQ=0.5697;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227228841 rs113206853 C CA 8032 PASS INDEL;BAVGPOST=0.986;BRSQ=0.946;LDAF=0.1437;AVGPOST=0.9619;RSQ=0.8860;ERATE=0.0091;THETA=0.0003;AC=296;AN=2184 GT:DS:GL:BD 0.13553114 0
1 227228845 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7683;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227228913 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0630;AVGPOST=0.9996;RSQ=0.9972;ERATE=0.0003;THETA=0.0003;AC=138;AN=2184 GT:DS:GL:BD 0.06318682 0
1 227228943 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.688;LDAF=0.0024;AVGPOST=0.9986;RSQ=0.7430;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227228946 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5128;AVGPOST=0.9963;RSQ=0.9940;ERATE=0.0008;THETA=0.0001;AC=1120;AN=2184 GT:DS:GL:BD 0.51282054 1
1 227228955 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0930;AVGPOST=0.9976;RSQ=0.9906;ERATE=0.0004;THETA=0.0001;AC=203;AN=2184 GT:DS:GL:BD 0.09294872 0
1 227228997 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.731;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.7081;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227229297 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6786;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227229341 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0167;AVGPOST=0.9980;RSQ=0.9553;ERATE=0.0004;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 227229443 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.6107;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227229488 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227229581 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0004;AVGPOST=0.9992;RSQ=0.1541;ERATE=0.0003;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 227229622 . AC A 40 PASS INDEL;BAVGPOST=1.000;BRSQ=0.722;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8177;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227229794 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9988;RSQ=0.9322;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227229820 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0036;AVGPOST=0.9997;RSQ=0.9617;ERATE=0.0002;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227229828 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=1.0000;RSQ=0.9957;ERATE=0.0002;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227229842 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227229875 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0595;AVGPOST=0.9995;RSQ=0.9968;ERATE=0.0003;THETA=0.0003;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 227229908 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.957;LDAF=0.1242;AVGPOST=0.9967;RSQ=0.9875;ERATE=0.0004;THETA=0.0014;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 227229977 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9483;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227230163 . AG A 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.710;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4912;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227230214 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.924;LDAF=0.0130;AVGPOST=0.9974;RSQ=0.9151;ERATE=0.0003;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 227230290 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0043;AVGPOST=0.9988;RSQ=0.8748;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227230365 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6236;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227230743 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.5326;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227230996 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0024;AVGPOST=0.9967;RSQ=0.4618;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227231099 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0074;AVGPOST=0.9970;RSQ=0.8390;ERATE=0.0006;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 227231355 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1253;AVGPOST=0.9989;RSQ=0.9958;ERATE=0.0003;THETA=0.0005;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 227231428 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0114;AVGPOST=0.9984;RSQ=0.9502;ERATE=0.0003;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 227231435 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0027;AVGPOST=0.9989;RSQ=0.8382;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227231471 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.7700;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227231509 . C CCATGAAGA 203 PASS INDEL;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5306;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227231659 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1201;AVGPOST=0.9979;RSQ=0.9921;ERATE=0.0005;THETA=0.0003;AC=261;AN=2184 GT:DS:GL:BD 0.11950549 0
1 227231681 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0389;AVGPOST=0.9988;RSQ=0.9883;ERATE=0.0003;THETA=0.0005;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 227231792 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0655;AVGPOST=0.9976;RSQ=0.9854;ERATE=0.0003;THETA=0.0003;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 227231804 . G GT 693 PASS INDEL;BAVGPOST=0.992;BRSQ=0.939;LDAF=0.0799;AVGPOST=0.9865;RSQ=0.9307;ERATE=0.0008;THETA=0.0003;AC=176;AN=2184 GT:DS:GL:BD 0.08058608 0
1 227231806 rs35804429 T TG 9801 PASS INDEL;BAVGPOST=0.993;BRSQ=0.949;LDAF=0.0726;AVGPOST=0.9932;RSQ=0.9651;ERATE=0.0003;THETA=0.0004;AC=160;AN=2184 GT:DS:GL:BD 0.07326008 0
1 227231895 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1700;AVGPOST=0.9986;RSQ=0.9957;ERATE=0.0005;THETA=0.0005;AC=371;AN=2184 GT:DS:GL:BD 0.16987179 0
1 227232008 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1299;AVGPOST=0.9989;RSQ=0.9956;ERATE=0.0004;THETA=0.0003;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 227232026 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.855;LDAF=0.0039;AVGPOST=0.9975;RSQ=0.7356;ERATE=0.0004;THETA=0.0019;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227232040 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6559;AVGPOST=0.9980;RSQ=0.9960;ERATE=0.0003;THETA=0.0002;AC=1432;AN=2184 GT:DS:GL:BD 0.65567768 1
1 227232115 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1267;AVGPOST=0.9977;RSQ=0.9921;ERATE=0.0005;THETA=0.0002;AC=276;AN=2184 GT:DS:GL:BD 0.12637363 0
1 227232123 rs66492926 TTC T 20931 PASS INDEL;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2249;AVGPOST=0.9852;RSQ=0.9684;ERATE=0.0021;THETA=0.0002;AC=488;AN=2184 GT:DS:GL:BD 0.22344323 0
1 227232201 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0019;AVGPOST=0.9986;RSQ=0.6822;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227232315 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1702;AVGPOST=0.9991;RSQ=0.9972;ERATE=0.0003;THETA=0.0004;AC=371;AN=2184 GT:DS:GL:BD 0.16987179 0
1 227232519 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227232578 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227232625 . AG A 80 PASS INDEL;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0042;AVGPOST=0.9956;RSQ=0.5941;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227232694 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0017;AVGPOST=0.9988;RSQ=0.6990;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227232696 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8448;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227232777 . CG C 63 PASS INDEL;BAVGPOST=1.000;BRSQ=0.780;LDAF=0.0025;AVGPOST=0.9968;RSQ=0.5191;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227232825 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227232973 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5161;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227233079 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0030;AVGPOST=0.9986;RSQ=0.8367;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227233124 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.973;LDAF=0.0649;AVGPOST=0.9996;RSQ=0.9972;ERATE=0.0003;THETA=0.0003;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 227233215 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9829;ERATE=0.0002;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227233291 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2943;AVGPOST=0.9983;RSQ=0.9962;ERATE=0.0004;THETA=0.0002;AC=644;AN=2184 GT:DS:GL:BD 0.29487181 0
1 227233316 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1342;AVGPOST=0.9989;RSQ=0.9960;ERATE=0.0004;THETA=0.0003;AC=292;AN=2184 GT:DS:GL:BD 0.13369964 0
1 227233415 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0654;AVGPOST=0.9990;RSQ=0.9947;ERATE=0.0002;THETA=0.0004;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 227233418 . TTTTC T 380 PASS INDEL;BAVGPOST=0.999;BRSQ=0.776;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7928;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227233477 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0071;AVGPOST=0.9968;RSQ=0.8205;ERATE=0.0003;THETA=0.0001;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227233497 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1245;AVGPOST=0.9992;RSQ=0.9969;ERATE=0.0003;THETA=0.0001;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 227233502 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9865;ERATE=0.0002;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227233549 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7545;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227233570 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0069;AVGPOST=0.9974;RSQ=0.8572;ERATE=0.0003;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 227233612 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.988;LDAF=0.1238;AVGPOST=0.9975;RSQ=0.9919;ERATE=0.0005;THETA=0.0002;AC=270;AN=2184 GT:DS:GL:BD 0.12362637 0
1 227233627 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0044;AVGPOST=0.9985;RSQ=0.8570;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227233702 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2229;AVGPOST=0.9986;RSQ=0.9966;ERATE=0.0005;THETA=0.0002;AC=485;AN=2184 GT:DS:GL:BD 0.22206959 0
1 227233724 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5667;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227233811 . TTTTTCC T 243 PASS INDEL;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0044;AVGPOST=0.9988;RSQ=0.8884;ERATE=0.0002;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227233841 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5980;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227233922 rs77005256 T TGC 15299 PASS INDEL;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2937;AVGPOST=0.9984;RSQ=0.9965;ERATE=0.0004;THETA=0.0003;AC=641;AN=2184 GT:DS:GL:BD 0.29349816 0
1 227234265 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.955;LDAF=0.0163;AVGPOST=0.9989;RSQ=0.9771;ERATE=0.0002;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 227234281 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8394;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227234374 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2185;AVGPOST=0.9992;RSQ=0.9980;ERATE=0.0004;THETA=0.0003;AC=476;AN=2184 GT:DS:GL:BD 0.21794872 0
1 227234432 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0389;AVGPOST=0.9999;RSQ=0.9990;ERATE=0.0002;THETA=0.0003;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 227234469 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0004;AVGPOST=0.9995;RSQ=0.5338;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227234513 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6599;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227234535 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0051;AVGPOST=0.9997;RSQ=0.9747;ERATE=0.0002;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227234594 rs67628634 ACTG A 28279 PASS INDEL;BAVGPOST=0.995;BRSQ=0.987;LDAF=0.2287;AVGPOST=0.9887;RSQ=0.9754;ERATE=0.0015;THETA=0.0003;AC=495;AN=2184 GT:DS:GL:BD 0.22664835 0
1 227234618 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2954;AVGPOST=0.9960;RSQ=0.9935;ERATE=0.0004;THETA=0.0001;AC=645;AN=2184 GT:DS:GL:BD 0.29532966 0
1 227234647 . ATT A 500 PASS INDEL;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6420;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227234670 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5747;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227234758 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4979;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227234933 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5569;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227234965 . A AT 118 PASS INDEL;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8499;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227235055 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227235066 . A AT 14 PASS INDEL;BAVGPOST=0.999;BRSQ=0.749;LDAF=0.0028;AVGPOST=0.9980;RSQ=0.7029;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227235098 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0652;AVGPOST=0.9994;RSQ=0.9955;ERATE=0.0003;THETA=0.0003;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 227235240 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1303;AVGPOST=0.9990;RSQ=0.9974;ERATE=0.0002;THETA=0.0004;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 227235295 rs74577704 G GT 13664 PASS INDEL;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1353;AVGPOST=0.9988;RSQ=0.9956;ERATE=0.0004;THETA=0.0003;AC=294;AN=2184 GT:DS:GL:BD 0.13461539 0
1 227235430 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1340;AVGPOST=0.9997;RSQ=0.9990;ERATE=0.0002;THETA=0.0003;AC=292;AN=2184 GT:DS:GL:BD 0.13369964 0
1 227235455 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1243;AVGPOST=0.9999;RSQ=0.9996;ERATE=0.0002;THETA=0.0002;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 227235510 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0361;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 227235569 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227235624 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9524;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227235650 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227235704 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227235718 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0002;THETA=0.0007;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 227235741 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227235828 . CTAAT C 1275 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0103;AVGPOST=0.9972;RSQ=0.8917;ERATE=0.0004;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 227235909 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8338;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227236016 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1245;AVGPOST=0.9997;RSQ=0.9987;ERATE=0.0003;THETA=0.0004;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 227236048 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1245;AVGPOST=0.9994;RSQ=0.9976;ERATE=0.0003;THETA=0.0004;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 227236070 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1244;AVGPOST=0.9992;RSQ=0.9969;ERATE=0.0004;THETA=0.0005;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 227236201 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.714;LDAF=0.0024;AVGPOST=0.9963;RSQ=0.4464;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227236206 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0030;AVGPOST=0.9968;RSQ=0.6312;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227236337 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1702;AVGPOST=0.9985;RSQ=0.9954;ERATE=0.0005;THETA=0.0006;AC=371;AN=2184 GT:DS:GL:BD 0.16987179 0
1 227236353 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.965;LDAF=0.0179;AVGPOST=0.9986;RSQ=0.9649;ERATE=0.0004;THETA=0.0005;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 227236453 rs34655609 A AG 5606 PASS INDEL;BAVGPOST=0.991;BRSQ=0.962;LDAF=0.1305;AVGPOST=0.9944;RSQ=0.9803;ERATE=0.0008;THETA=0.0004;AC=286;AN=2184 GT:DS:GL:BD 0.13095239 0
1 227236521 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.679;LDAF=0.0036;AVGPOST=0.9952;RSQ=0.4403;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227236626 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0037;AVGPOST=0.9981;RSQ=0.8164;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227236677 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0024;AVGPOST=0.9978;RSQ=0.6222;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227236820 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7143;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227236942 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.723;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.6117;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227236970 rs75855393 T TAC 34763 PASS INDEL;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2944;AVGPOST=0.9945;RSQ=0.9889;ERATE=0.0009;THETA=0.0003;AC=643;AN=2184 GT:DS:GL:BD 0.29441392 0
1 227237309 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227237367 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.984;LDAF=0.1245;AVGPOST=0.9984;RSQ=0.9940;ERATE=0.0004;THETA=0.0004;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 227237491 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.636;LDAF=0.0021;AVGPOST=0.9974;RSQ=0.5918;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227237584 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0029;AVGPOST=0.9979;RSQ=0.7279;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227237650 . T TAG 8063 PASS INDEL;BAVGPOST=0.966;BRSQ=0.914;LDAF=0.2768;AVGPOST=0.9540;RSQ=0.9127;ERATE=0.0084;THETA=0.0002;AC=597;AN=2184 GT:DS:GL:BD 0.27335164 0
1 227237750 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4691;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227237769 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.4169;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227237771 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.670;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5931;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227237777 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.4801;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227237797 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227237886 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1244;AVGPOST=0.9998;RSQ=0.9993;ERATE=0.0003;THETA=0.0005;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 227238076 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0111;AVGPOST=0.9997;RSQ=0.9877;ERATE=0.0002;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 227238196 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1699;AVGPOST=0.9988;RSQ=0.9961;ERATE=0.0006;THETA=0.0003;AC=371;AN=2184 GT:DS:GL:BD 0.16987179 0
1 227238199 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0056;AVGPOST=0.9991;RSQ=0.9404;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227238249 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7639;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227238291 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227238305 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0015;AVGPOST=0.9983;RSQ=0.5934;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227238308 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0269;AVGPOST=0.9991;RSQ=0.9856;ERATE=0.0002;THETA=0.0004;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 227238443 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2976;AVGPOST=0.9940;RSQ=0.9887;ERATE=0.0009;THETA=0.0003;AC=647;AN=2184 GT:DS:GL:BD 0.29624543 0
1 227238461 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227238540 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0341;AVGPOST=0.9981;RSQ=0.9762;ERATE=0.0003;THETA=0.0003;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 227238548 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.7004;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227238665 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8199;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227238753 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0026;AVGPOST=0.9981;RSQ=0.7674;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227238762 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227238829 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1242;AVGPOST=0.9992;RSQ=0.9970;ERATE=0.0003;THETA=0.0006;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 227238886 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.7023;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227239040 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.1708;AVGPOST=0.9991;RSQ=0.9971;ERATE=0.0003;THETA=0.0002;AC=373;AN=2184 GT:DS:GL:BD 0.17078754 0
1 227239113 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7637;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227239170 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7369;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227239208 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0131;AVGPOST=0.9976;RSQ=0.9387;ERATE=0.0004;THETA=0.0002;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 227239268 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9537;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227239299 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0112;AVGPOST=0.9995;RSQ=0.9822;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 227239354 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9756;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227239407 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8617;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227239562 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1660;AVGPOST=0.9972;RSQ=0.9912;ERATE=0.0003;THETA=0.0003;AC=363;AN=2184 GT:DS:GL:BD 0.16620879 0
1 227239591 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7390;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227239626 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227239702 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.963;LDAF=0.0189;AVGPOST=0.9996;RSQ=0.9914;ERATE=0.0002;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 227239739 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1243;AVGPOST=0.9997;RSQ=0.9987;ERATE=0.0003;THETA=0.0003;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 227239746 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6576;AVGPOST=0.9995;RSQ=0.9989;ERATE=0.0002;THETA=0.0003;AC=1436;AN=2184 GT:DS:GL:BD 0.65750915 1
1 227239932 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7388;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227239935 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6602;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227240030 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.875;LDAF=0.0101;AVGPOST=0.9968;RSQ=0.8820;ERATE=0.0002;THETA=0.0001;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 227240039 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4957;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227240046 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1306;AVGPOST=0.9989;RSQ=0.9959;ERATE=0.0003;THETA=0.0003;AC=286;AN=2184 GT:DS:GL:BD 0.13095239 0
1 227240130 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1693;AVGPOST=0.9967;RSQ=0.9899;ERATE=0.0009;THETA=0.0003;AC=367;AN=2184 GT:DS:GL:BD 0.16804029 0
1 227240201 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1691;AVGPOST=0.9993;RSQ=0.9977;ERATE=0.0003;THETA=0.0004;AC=369;AN=2184 GT:DS:GL:BD 0.16895604 0
1 227240217 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1696;AVGPOST=0.9986;RSQ=0.9959;ERATE=0.0003;THETA=0.0004;AC=369;AN=2184 GT:DS:GL:BD 0.16895604 0
1 227240262 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7754;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227240271 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7683;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227240305 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0034;AVGPOST=0.9984;RSQ=0.7919;ERATE=0.0007;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227240317 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2931;AVGPOST=0.9984;RSQ=0.9963;ERATE=0.0003;THETA=0.0006;AC=641;AN=2184 GT:DS:GL:BD 0.29349816 0
1 227240423 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8639;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227240430 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1187;AVGPOST=0.9987;RSQ=0.9950;ERATE=0.0002;THETA=0.0003;AC=259;AN=2184 GT:DS:GL:BD 0.11858974 0
1 227240465 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9654;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227240554 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.8015;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227240621 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.956;LDAF=0.0262;AVGPOST=0.9977;RSQ=0.9644;ERATE=0.0003;THETA=0.0003;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 227240626 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0046;AVGPOST=0.9995;RSQ=0.9545;ERATE=0.0002;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227240794 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9882;ERATE=0.0002;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227240905 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6524;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227240920 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7393;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227240961 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0002;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227241085 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8313;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227241254 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0110;AVGPOST=0.9998;RSQ=0.9926;ERATE=0.0003;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 227241297 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0590;AVGPOST=0.9987;RSQ=0.9932;ERATE=0.0002;THETA=0.0002;AC=129;AN=2184 GT:DS:GL:BD 0.05906593 0
1 227241300 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.6580;AVGPOST=0.9978;RSQ=0.9958;ERATE=0.0007;THETA=0.0005;AC=1436;AN=2184 GT:DS:GL:BD 0.65750915 1
1 227241308 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0382;AVGPOST=0.9991;RSQ=0.9895;ERATE=0.0003;THETA=0.0003;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 227241381 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0650;AVGPOST=0.9996;RSQ=0.9972;ERATE=0.0003;THETA=0.0006;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 227241602 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5599;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227241611 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0032;AVGPOST=0.9992;RSQ=0.9037;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227241614 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.1343;AVGPOST=0.9988;RSQ=0.9966;ERATE=0.0003;THETA=0.0007;AC=292;AN=2184 GT:DS:GL:BD 0.13369964 0
1 227241615 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.894;LDAF=0.0075;AVGPOST=0.9989;RSQ=0.9427;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 227241676 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1302;AVGPOST=0.9971;RSQ=0.9900;ERATE=0.0004;THETA=0.0002;AC=282;AN=2184 GT:DS:GL:BD 0.12912089 0
1 227241811 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2263;AVGPOST=0.9989;RSQ=0.9975;ERATE=0.0003;THETA=0.0005;AC=493;AN=2184 GT:DS:GL:BD 0.22573259 0
1 227241840 rs10560887 CTTTA C 31302 PASS INDEL;BAVGPOST=0.984;BRSQ=0.961;LDAF=0.2872;AVGPOST=0.9808;RSQ=0.9635;ERATE=0.0040;THETA=0.0013;AC=629;AN=2184 GT:DS:GL:BD 0.28800365 0
1 227241998 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9914;ERATE=0.0002;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227242019 . T TG 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0018;AVGPOST=0.9976;RSQ=0.5328;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227242099 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2183;AVGPOST=0.9982;RSQ=0.9959;ERATE=0.0004;THETA=0.0004;AC=475;AN=2184 GT:DS:GL:BD 0.21749084 0
1 227242149 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0054;AVGPOST=0.9991;RSQ=0.9422;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227242152 . ATGGAAGGT A 185 PASS INDEL;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0029;AVGPOST=0.9977;RSQ=0.6622;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227242240 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.869;LDAF=0.0064;AVGPOST=0.9994;RSQ=0.9541;ERATE=0.0003;THETA=0.0001;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 227242241 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4692;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227242247 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.1407;AVGPOST=0.9994;RSQ=0.9979;ERATE=0.0003;THETA=0.0001;AC=308;AN=2184 GT:DS:GL:BD 0.14102565 0
1 227242285 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227242732 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.634;LDAF=0.0092;AVGPOST=0.9941;RSQ=0.7582;ERATE=0.0004;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 227242877 . T TA 9 PASS INDEL;BAVGPOST=0.999;BRSQ=0.548;LDAF=0.0066;AVGPOST=0.9953;RSQ=0.6839;ERATE=0.0011;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227242958 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2969;AVGPOST=0.9941;RSQ=0.9882;ERATE=0.0016;THETA=0.0003;AC=648;AN=2184 GT:DS:GL:BD 0.29670331 0
1 227243118 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.718;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4350;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227243136 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0058;AVGPOST=0.9984;RSQ=0.8830;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227243208 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1236;AVGPOST=0.9986;RSQ=0.9948;ERATE=0.0007;THETA=0.0003;AC=270;AN=2184 GT:DS:GL:BD 0.12362637 0
1 227243423 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1244;AVGPOST=0.9997;RSQ=0.9989;ERATE=0.0002;THETA=0.0003;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 227243437 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.0789;AVGPOST=0.9965;RSQ=0.9807;ERATE=0.0003;THETA=0.0004;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 227243572 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6083;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227243573 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0393;AVGPOST=0.9989;RSQ=0.9898;ERATE=0.0004;THETA=0.0003;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 227243598 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.986;LDAF=0.0664;AVGPOST=0.9963;RSQ=0.9793;ERATE=0.0005;THETA=0.0004;AC=144;AN=2184 GT:DS:GL:BD 0.06593407 0
1 227243709 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.702;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4074;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227243755 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0108;AVGPOST=0.9985;RSQ=0.9418;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 227243864 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.761;LDAF=0.0018;AVGPOST=0.9981;RSQ=0.5934;ERATE=0.0003;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227243924 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.764;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5713;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227243951 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227244074 . GTTTCT G 1508 PASS INDEL;BAVGPOST=0.988;BRSQ=0.929;LDAF=0.1228;AVGPOST=0.9615;RSQ=0.8634;ERATE=0.0007;THETA=0.0013;AC=252;AN=2184 GT:DS:GL:BD 0.11538462 0
1 227244089 . TTTTC T 9115 PASS INDEL;BAVGPOST=0.963;BRSQ=0.830;LDAF=0.1441;AVGPOST=0.9179;RSQ=0.7392;ERATE=0.0226;THETA=0.0004;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 227244136 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0042;AVGPOST=0.9997;RSQ=0.9637;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227244234 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0207;AVGPOST=0.9974;RSQ=0.9498;ERATE=0.0004;THETA=0.0002;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 227244293 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.754;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5357;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227244380 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8827;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227244484 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0854;AVGPOST=0.9990;RSQ=0.9945;ERATE=0.0002;THETA=0.0004;AC=187;AN=2184 GT:DS:GL:BD 0.08562271 0
1 227244496 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1244;AVGPOST=0.9989;RSQ=0.9959;ERATE=0.0003;THETA=0.0002;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 227244506 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9335;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227244536 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0023;AVGPOST=0.9984;RSQ=0.7589;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227244600 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.6568;AVGPOST=0.9958;RSQ=0.9931;ERATE=0.0004;THETA=0.0003;AC=1434;AN=2184 GT:DS:GL:BD 0.65659338 1
1 227244694 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6996;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227244790 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2229;AVGPOST=0.9980;RSQ=0.9951;ERATE=0.0005;THETA=0.0005;AC=485;AN=2184 GT:DS:GL:BD 0.22206959 0
1 227244840 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1249;AVGPOST=0.9961;RSQ=0.9862;ERATE=0.0005;THETA=0.0003;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 227244946 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.985;LDAF=0.1690;AVGPOST=0.9971;RSQ=0.9921;ERATE=0.0004;THETA=0.0003;AC=367;AN=2184 GT:DS:GL:BD 0.16804029 0
1 227245003 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1697;AVGPOST=0.9977;RSQ=0.9932;ERATE=0.0003;THETA=0.0003;AC=369;AN=2184 GT:DS:GL:BD 0.16895604 0
1 227245008 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0032;AVGPOST=0.9992;RSQ=0.8789;ERATE=0.0002;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227245035 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0021;AVGPOST=0.9972;RSQ=0.4647;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227245050 . CAT C 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4802;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227245066 rs5781459 G GTTAT 102161 PASS INDEL;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.6547;AVGPOST=0.9915;RSQ=0.9855;ERATE=0.0009;THETA=0.0004;AC=1433;AN=2184 GT:DS:GL:BD 0.65613556 1
1 227245171 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7778;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227245198 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2229;AVGPOST=0.9985;RSQ=0.9963;ERATE=0.0004;THETA=0.0002;AC=485;AN=2184 GT:DS:GL:BD 0.22206959 0
1 227245216 . CACTGAGGTTCT C 21384 PASS INDEL;BAVGPOST=0.974;BRSQ=0.913;LDAF=0.1692;AVGPOST=0.9938;RSQ=0.9818;ERATE=0.0007;THETA=0.0002;AC=369;AN=2184 GT:DS:GL:BD 0.16895604 0
1 227245308 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1244;AVGPOST=0.9989;RSQ=0.9957;ERATE=0.0003;THETA=0.0003;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 227245324 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6868;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227245362 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5072;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227245426 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227245543 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.1242;AVGPOST=0.9992;RSQ=0.9968;ERATE=0.0004;THETA=0.0002;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 227245561 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.986;LDAF=0.1220;AVGPOST=0.9948;RSQ=0.9826;ERATE=0.0006;THETA=0.0003;AC=266;AN=2184 GT:DS:GL:BD 0.12179487 0
1 227245585 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.986;LDAF=0.0882;AVGPOST=0.9978;RSQ=0.9878;ERATE=0.0003;THETA=0.0002;AC=191;AN=2184 GT:DS:GL:BD 0.08745421 0
1 227245598 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0085;AVGPOST=0.9993;RSQ=0.9612;ERATE=0.0003;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 227245611 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6811;ERATE=0.0002;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227245738 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5767;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227245784 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4551;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227245861 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1301;AVGPOST=0.9984;RSQ=0.9941;ERATE=0.0006;THETA=0.0003;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 227245965 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0601;AVGPOST=0.9987;RSQ=0.9935;ERATE=0.0003;THETA=0.0002;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 227246013 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0010;AVGPOST=0.9984;RSQ=0.4125;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227246059 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1244;AVGPOST=0.9997;RSQ=0.9987;ERATE=0.0003;THETA=0.0003;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 227246158 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.627;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227246194 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0114;AVGPOST=0.9991;RSQ=0.9687;ERATE=0.0002;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 227246219 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0044;AVGPOST=0.9990;RSQ=0.9023;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227246229 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7109;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227246243 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0149;AVGPOST=0.9992;RSQ=0.9753;ERATE=0.0003;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 227246267 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0058;AVGPOST=0.9977;RSQ=0.8625;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227246451 . C CAT 77 PASS INDEL;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5351;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227246457 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.673;LDAF=0.0050;AVGPOST=0.9956;RSQ=0.7264;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227246464 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0393;AVGPOST=0.9991;RSQ=0.9915;ERATE=0.0003;THETA=0.0004;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 227246509 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9157;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227246614 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0049;AVGPOST=0.9975;RSQ=0.8075;ERATE=0.0004;THETA=0.0029;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227246701 rs67377723 TA T 19746 PASS INDEL;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2192;AVGPOST=0.9965;RSQ=0.9911;ERATE=0.0007;THETA=0.0003;AC=476;AN=2184 GT:DS:GL:BD 0.21794872 0
1 227246843 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8232;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227246896 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6029;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227246999 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227247016 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1243;AVGPOST=0.9999;RSQ=0.9996;ERATE=0.0002;THETA=0.0017;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 227247160 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.0806;AVGPOST=0.9991;RSQ=0.9943;ERATE=0.0003;THETA=0.0017;AC=176;AN=2184 GT:DS:GL:BD 0.08058608 0
1 227247221 . CCA C 25 PASS INDEL;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0015;AVGPOST=0.9982;RSQ=0.5471;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227247314 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6978;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227247374 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0082;AVGPOST=0.9992;RSQ=0.9634;ERATE=0.0002;THETA=0.0012;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227247418 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227247422 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8588;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227247435 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0018;AVGPOST=0.9993;RSQ=0.8545;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227247515 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1238;AVGPOST=0.9985;RSQ=0.9947;ERATE=0.0003;THETA=0.0002;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 227247536 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1705;AVGPOST=0.9979;RSQ=0.9943;ERATE=0.0003;THETA=0.0005;AC=371;AN=2184 GT:DS:GL:BD 0.16987179 0
1 227247610 . GAAC G 5598 PASS INDEL;BAVGPOST=0.998;BRSQ=0.982;LDAF=0.0401;AVGPOST=0.9957;RSQ=0.9656;ERATE=0.0004;THETA=0.0003;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 227247625 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.800;LDAF=0.0014;AVGPOST=0.9979;RSQ=0.4337;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227247653 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0650;AVGPOST=0.9992;RSQ=0.9942;ERATE=0.0003;THETA=0.0005;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 227247723 . T TA 3030 PASS INDEL;BAVGPOST=0.979;BRSQ=0.906;LDAF=0.1197;AVGPOST=0.9896;RSQ=0.9629;ERATE=0.0011;THETA=0.0003;AC=264;AN=2184 GT:DS:GL:BD 0.12087912 0
1 227247738 . T TG 74 PASS INDEL;BAVGPOST=0.999;BRSQ=0.626;LDAF=0.0055;AVGPOST=0.9947;RSQ=0.5949;ERATE=0.0011;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227247739 . T TTG 376 PASS INDEL;BAVGPOST=0.994;BRSQ=0.536;LDAF=0.0156;AVGPOST=0.9876;RSQ=0.6823;ERATE=0.0011;THETA=0.0002;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 227247793 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.794;LDAF=0.0147;AVGPOST=0.9949;RSQ=0.8501;ERATE=0.0010;THETA=0.0006;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 227247808 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.724;LDAF=0.0072;AVGPOST=0.9926;RSQ=0.6151;ERATE=0.0006;THETA=0.0009;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227247877 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.962;LDAF=0.2924;AVGPOST=0.9934;RSQ=0.9864;ERATE=0.0006;THETA=0.0002;AC=638;AN=2184 GT:DS:GL:BD 0.29212454 0
1 227247973 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.749;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8304;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227248119 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0110;AVGPOST=0.9999;RSQ=0.9944;ERATE=0.0002;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 227248154 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227248185 . C CA 227 PASS INDEL;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0033;AVGPOST=0.9975;RSQ=0.7121;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227248200 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8729;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227248246 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6564;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227248260 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0013;AVGPOST=0.9994;RSQ=0.8460;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227248288 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227248418 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.966;LDAF=0.0353;AVGPOST=0.9982;RSQ=0.9780;ERATE=0.0004;THETA=0.0003;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 227248425 . T TC 40 PASS INDEL;BAVGPOST=1.000;BRSQ=0.690;LDAF=0.0021;AVGPOST=0.9968;RSQ=0.3787;ERATE=0.0006;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227248485 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0061;AVGPOST=0.9989;RSQ=0.9183;ERATE=0.0004;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227248532 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9944;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227248543 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.0028;AVGPOST=0.9988;RSQ=0.8450;ERATE=0.0003;THETA=0.0022;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227248566 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0038;AVGPOST=0.9993;RSQ=0.9176;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227248597 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.660;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.4500;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227248602 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.623;LDAF=0.0020;AVGPOST=0.9974;RSQ=0.5493;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227248742 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227248815 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227248830 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.5271;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227248935 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0595;AVGPOST=0.9998;RSQ=0.9987;ERATE=0.0002;THETA=0.0004;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 227249034 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7109;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227249042 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0038;AVGPOST=0.9995;RSQ=0.9466;ERATE=0.0002;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227249045 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0026;AVGPOST=0.9986;RSQ=0.7813;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227249134 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227249207 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0111;AVGPOST=0.9998;RSQ=0.9928;ERATE=0.0002;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 227249225 rs57723207 TATACAA T 30246 PASS INDEL;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2228;AVGPOST=0.9961;RSQ=0.9907;ERATE=0.0005;THETA=0.0003;AC=484;AN=2184 GT:DS:GL:BD 0.22161172 0
1 227249261 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0062;AVGPOST=0.9986;RSQ=0.9125;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227249388 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2943;AVGPOST=0.9988;RSQ=0.9974;ERATE=0.0004;THETA=0.0005;AC=643;AN=2184 GT:DS:GL:BD 0.29441392 0
1 227249399 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0034;AVGPOST=0.9997;RSQ=0.9545;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227249421 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.749;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6637;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227249448 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0008;AVGPOST=0.9998;RSQ=0.8876;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227249587 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0112;AVGPOST=0.9989;RSQ=0.9637;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 227249607 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9865;ERATE=0.0002;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227249623 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1702;AVGPOST=0.9991;RSQ=0.9971;ERATE=0.0003;THETA=0.0004;AC=371;AN=2184 GT:DS:GL:BD 0.16987179 0
1 227249624 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0641;AVGPOST=0.9997;RSQ=0.9984;ERATE=0.0002;THETA=0.0002;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 227249724 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9201;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227249904 . A AT 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.693;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5097;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227249954 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.777;LDAF=0.0013;AVGPOST=0.9997;RSQ=0.9118;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227250184 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1340;AVGPOST=0.9994;RSQ=0.9977;ERATE=0.0003;THETA=0.0007;AC=292;AN=2184 GT:DS:GL:BD 0.13369964 0
1 227250237 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1424;AVGPOST=0.9984;RSQ=0.9947;ERATE=0.0004;THETA=0.0004;AC=311;AN=2184 GT:DS:GL:BD 0.14239927 0
1 227250245 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0076;AVGPOST=0.9988;RSQ=0.9334;ERATE=0.0002;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 227250262 . AG A 77 PASS INDEL;BAVGPOST=1.000;BRSQ=0.753;LDAF=0.0034;AVGPOST=0.9968;RSQ=0.6657;ERATE=0.0005;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227250277 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.2948;AVGPOST=0.9973;RSQ=0.9949;ERATE=0.0003;THETA=0.0002;AC=644;AN=2184 GT:DS:GL:BD 0.29487181 0
1 227250291 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.2941;AVGPOST=0.9979;RSQ=0.9954;ERATE=0.0003;THETA=0.0003;AC=643;AN=2184 GT:DS:GL:BD 0.29441392 0
1 227250459 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.9867;AVGPOST=0.9984;RSQ=0.9531;ERATE=0.0003;THETA=0.0005;AC=2156;AN=2184 GT:DS:GL:BD 0.98717946 1
1 227250586 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7431;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227250589 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5035;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227250620 . A AAAAT 72 PASS INDEL;BAVGPOST=1.000;BRSQ=0.713;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7406;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227250668 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0017;AVGPOST=0.9986;RSQ=0.6686;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227250678 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6415;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227250769 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227250775 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2944;AVGPOST=0.9993;RSQ=0.9983;ERATE=0.0004;THETA=0.0003;AC=643;AN=2184 GT:DS:GL:BD 0.29441392 0
1 227250809 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1245;AVGPOST=0.9995;RSQ=0.9982;ERATE=0.0002;THETA=0.0003;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 227250953 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7948;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227251491 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0671;AVGPOST=0.9980;RSQ=0.9877;ERATE=0.0004;THETA=0.0017;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 227251496 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0112;AVGPOST=0.9996;RSQ=0.9860;ERATE=0.0002;THETA=0.0009;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 227251553 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0031;AVGPOST=0.9994;RSQ=0.9348;ERATE=0.0002;THETA=0.0001;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227251572 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0326;AVGPOST=0.9996;RSQ=0.9951;ERATE=0.0003;THETA=0.0003;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 227251706 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0058;AVGPOST=0.9986;RSQ=0.9024;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227251801 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1243;AVGPOST=0.9997;RSQ=0.9989;ERATE=0.0003;THETA=0.0006;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 227251804 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9687;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227251811 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9605;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227251914 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9469;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227251918 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0041;AVGPOST=0.9992;RSQ=0.9173;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227251931 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8807;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227251942 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227251999 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1243;AVGPOST=0.9994;RSQ=0.9976;ERATE=0.0003;THETA=0.0005;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 227252124 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.702;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8374;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227252167 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0027;AVGPOST=0.9973;RSQ=0.6089;ERATE=0.0007;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227252353 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7682;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227252354 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6371;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227252431 rs72352538 TTTC T 16573 PASS INDEL;BAVGPOST=0.996;BRSQ=0.983;LDAF=0.1304;AVGPOST=0.9954;RSQ=0.9838;ERATE=0.0007;THETA=0.0004;AC=286;AN=2184 GT:DS:GL:BD 0.13095239 0
1 227252451 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2222;AVGPOST=0.9974;RSQ=0.9944;ERATE=0.0003;THETA=0.0002;AC=484;AN=2184 GT:DS:GL:BD 0.22161172 0
1 227252482 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5715;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227252554 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0036;AVGPOST=0.9984;RSQ=0.8590;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227252626 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.945;BRSQ=0.876;LDAF=0.2846;AVGPOST=0.9141;RSQ=0.8427;ERATE=0.0100;THETA=0.0002;AC=617;AN=2184 GT:DS:GL:BD 0.28250915 0
1 227252823 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.775;LDAF=0.0077;AVGPOST=0.9957;RSQ=0.7695;ERATE=0.0010;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 227252979 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9556;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227253188 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8540;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227253205 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8136;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227253216 . CCAAA C 97 PASS INDEL;BAVGPOST=1.000;BRSQ=0.725;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8374;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227253311 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7740;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227253337 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8640;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227253339 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0079;AVGPOST=0.9998;RSQ=0.9888;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227253367 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6466;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227253657 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0034;AVGPOST=0.9989;RSQ=0.8906;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227253807 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1243;AVGPOST=0.9999;RSQ=0.9994;ERATE=0.0002;THETA=0.0004;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 227253933 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.5942;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227253953 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9443;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227254005 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.910;LDAF=0.0608;AVGPOST=0.9899;RSQ=0.9410;ERATE=0.0003;THETA=0.0002;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 227254045 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.3627;AVGPOST=0.9980;RSQ=0.9962;ERATE=0.0003;THETA=0.0006;AC=793;AN=2184 GT:DS:GL:BD 0.36309522 0
1 227254068 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.1246;AVGPOST=0.9982;RSQ=0.9942;ERATE=0.0003;THETA=0.0002;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 227254111 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0002;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227254113 rs60372771 C CA 10724 PASS INDEL;BAVGPOST=0.997;BRSQ=0.987;LDAF=0.1218;AVGPOST=0.9966;RSQ=0.9890;ERATE=0.0003;THETA=0.0005;AC=266;AN=2184 GT:DS:GL:BD 0.12179487 0
1 227254119 . A AG 171 PASS INDEL;BAVGPOST=0.955;BRSQ=0.461;LDAF=0.0364;AVGPOST=0.9704;RSQ=0.7064;ERATE=0.0003;THETA=0.0003;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 227254165 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.939;LDAF=0.0075;AVGPOST=0.9988;RSQ=0.9424;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 227254256 . CAAAT C 25 PASS INDEL;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7918;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227254380 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2942;AVGPOST=0.9993;RSQ=0.9985;ERATE=0.0003;THETA=0.0005;AC=643;AN=2184 GT:DS:GL:BD 0.29441392 0
1 227254399 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1338;AVGPOST=0.9992;RSQ=0.9971;ERATE=0.0003;THETA=0.0008;AC=292;AN=2184 GT:DS:GL:BD 0.13369964 0
1 227254402 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.6599;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227254407 . GAGAAA G 527 PASS INDEL;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0037;AVGPOST=0.9996;RSQ=0.9503;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227254715 . TG T 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7601;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227254756 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.924;LDAF=0.9908;AVGPOST=0.9994;RSQ=0.9701;ERATE=0.0003;THETA=0.0008;AC=2164;AN=2184 GT:DS:GL:BD 0.99084246 1
1 227254776 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0163;AVGPOST=0.9989;RSQ=0.9747;ERATE=0.0003;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 227254800 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0005;AVGPOST=0.9994;RSQ=0.4676;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227254861 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227254899 . C CG 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.7297;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227255043 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2945;AVGPOST=0.9988;RSQ=0.9973;ERATE=0.0005;THETA=0.0004;AC=643;AN=2184 GT:DS:GL:BD 0.29441392 0
1 227255142 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.7240;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227255166 . T TC 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4525;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227255174 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6186;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227255197 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.816;LDAF=0.0018;AVGPOST=0.9996;RSQ=0.9151;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227255284 . CTTT C 17 PASS INDEL;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6112;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227255300 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.753;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6386;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227255362 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4754;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227255417 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8463;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227255731 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.804;LDAF=0.0030;AVGPOST=0.9977;RSQ=0.7162;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227255858 . CATTG C 699 PASS INDEL;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0035;AVGPOST=0.9975;RSQ=0.6949;ERATE=0.0006;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227255860 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.733;LDAF=0.0045;AVGPOST=0.9980;RSQ=0.8018;ERATE=0.0003;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227255941 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.970;LDAF=0.8340;AVGPOST=0.9713;RSQ=0.9183;ERATE=0.0031;THETA=0.0003;AC=1830;AN=2184 GT:DS:GL:BD 0.83791208 1
1 227256046 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0055;AVGPOST=0.9975;RSQ=0.8028;ERATE=0.0006;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227256057 . T TTA 1004 PASS INDEL;BAVGPOST=0.989;BRSQ=0.484;LDAF=0.0141;AVGPOST=0.9910;RSQ=0.7243;ERATE=0.0007;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 227256090 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.668;LDAF=0.0020;AVGPOST=0.9973;RSQ=0.4968;ERATE=0.0005;THETA=0.0037;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227256213 . TAAGA T 175 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0029;AVGPOST=0.9978;RSQ=0.6737;ERATE=0.0005;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227256217 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0381;AVGPOST=0.9995;RSQ=0.9951;ERATE=0.0003;THETA=0.0002;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 227256333 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.8302;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227256440 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5320;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227256471 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0041;AVGPOST=0.9996;RSQ=0.9620;ERATE=0.0003;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227256572 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.797;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8216;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227256649 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.809;LDAF=0.0046;AVGPOST=0.9981;RSQ=0.8467;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227256742 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.773;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7593;ERATE=0.0004;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227256894 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7728;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227257029 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0117;AVGPOST=0.9982;RSQ=0.9489;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 227257075 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2949;AVGPOST=0.9992;RSQ=0.9982;ERATE=0.0003;THETA=0.0003;AC=644;AN=2184 GT:DS:GL:BD 0.29487181 0
1 227257142 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.929;LDAF=0.0150;AVGPOST=0.9977;RSQ=0.9478;ERATE=0.0003;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 227257166 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1249;AVGPOST=0.9993;RSQ=0.9973;ERATE=0.0004;THETA=0.0004;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 227257417 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0037;AVGPOST=1.0000;RSQ=0.9952;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227257453 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227257681 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9682;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227257725 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5946;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227257834 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8278;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227258005 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0059;AVGPOST=0.9993;RSQ=0.9519;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227258043 . A AT 11614 PASS INDEL;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1375;AVGPOST=0.9922;RSQ=0.9745;ERATE=0.0014;THETA=0.0003;AC=298;AN=2184 GT:DS:GL:BD 0.13644689 0
1 227258094 . AT A 27 PASS INDEL;BAVGPOST=0.838;BRSQ=0.105;LDAF=0.1194;AVGPOST=0.8830;RSQ=0.5897;ERATE=0.0035;THETA=0.0005;AC=219;AN=2184 GT:DS:GL:BD 0.10027473 0
1 227258099 . TA T 11635 PASS INDEL;BAVGPOST=0.997;BRSQ=0.988;LDAF=0.1715;AVGPOST=0.9962;RSQ=0.9883;ERATE=0.0010;THETA=0.0007;AC=373;AN=2184 GT:DS:GL:BD 0.17078754 0
1 227258130 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0028;AVGPOST=0.9985;RSQ=0.8017;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227258150 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0057;AVGPOST=0.9975;RSQ=0.8310;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227258213 . C CA 21 PASS INDEL;BAVGPOST=0.998;BRSQ=0.699;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6856;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227258228 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2948;AVGPOST=0.9991;RSQ=0.9980;ERATE=0.0003;THETA=0.0003;AC=644;AN=2184 GT:DS:GL:BD 0.29487181 0
1 227258377 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0017;AVGPOST=0.9980;RSQ=0.5682;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227258416 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227258537 . GATA G 1099 PASS INDEL;BAVGPOST=0.998;BRSQ=0.849;LDAF=0.0076;AVGPOST=0.9989;RSQ=0.9423;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227258556 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0076;AVGPOST=0.9994;RSQ=0.9672;ERATE=0.0002;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227258602 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1731;AVGPOST=0.9927;RSQ=0.9805;ERATE=0.0021;THETA=0.0005;AC=375;AN=2184 GT:DS:GL:BD 0.17170329 0
1 227258640 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.854;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.9032;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227258768 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9799;ERATE=0.0002;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227258800 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7320;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227258834 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.881;LDAF=0.0074;AVGPOST=0.9978;RSQ=0.8999;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 227258858 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6577;AVGPOST=0.9987;RSQ=0.9974;ERATE=0.0004;THETA=0.0003;AC=1436;AN=2184 GT:DS:GL:BD 0.65750915 1
1 227258895 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0196;AVGPOST=0.9991;RSQ=0.9848;ERATE=0.0002;THETA=0.0003;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 227258908 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7756;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227258936 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7344;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227259027 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2949;AVGPOST=0.9989;RSQ=0.9975;ERATE=0.0005;THETA=0.0004;AC=644;AN=2184 GT:DS:GL:BD 0.29487181 0
1 227259037 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6952;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227259040 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0110;AVGPOST=0.9996;RSQ=0.9838;ERATE=0.0003;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 227259076 . T TA 22 PASS INDEL;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0030;AVGPOST=0.9957;RSQ=0.4730;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227259170 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1702;AVGPOST=0.9987;RSQ=0.9965;ERATE=0.0004;THETA=0.0002;AC=371;AN=2184 GT:DS:GL:BD 0.16987179 0
1 227259180 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0595;AVGPOST=0.9995;RSQ=0.9965;ERATE=0.0003;THETA=0.0003;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 227259259 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0022;AVGPOST=0.9996;RSQ=0.9270;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227259605 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.1929;AVGPOST=0.9977;RSQ=0.9935;ERATE=0.0003;THETA=0.0005;AC=423;AN=2184 GT:DS:GL:BD 0.19368131 0
1 227259652 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1701;AVGPOST=0.9995;RSQ=0.9985;ERATE=0.0003;THETA=0.0002;AC=371;AN=2184 GT:DS:GL:BD 0.16987179 0
1 227259749 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.761;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6978;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227259804 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227259837 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227259884 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0649;AVGPOST=0.9998;RSQ=0.9987;ERATE=0.0002;THETA=0.0004;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 227260039 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0046;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227260129 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8316;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227260130 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1339;AVGPOST=1.0000;RSQ=0.9998;ERATE=0.0002;THETA=0.0003;AC=292;AN=2184 GT:DS:GL:BD 0.13369964 0
1 227260177 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227260274 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0110;AVGPOST=0.9997;RSQ=0.9876;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 227260296 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2949;AVGPOST=0.9994;RSQ=0.9987;ERATE=0.0003;THETA=0.0003;AC=644;AN=2184 GT:DS:GL:BD 0.29487181 0
1 227260396 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0081;AVGPOST=0.9995;RSQ=0.9684;ERATE=0.0003;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 227260489 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227260519 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.6633;AVGPOST=0.9988;RSQ=0.9975;ERATE=0.0005;THETA=0.0002;AC=1449;AN=2184 GT:DS:GL:BD 0.66346157 1
1 227260567 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7425;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227260573 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9258;ERATE=0.0002;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227260718 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1344;AVGPOST=0.9978;RSQ=0.9923;ERATE=0.0004;THETA=0.0002;AC=292;AN=2184 GT:DS:GL:BD 0.13369964 0
1 227260724 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0058;AVGPOST=0.9993;RSQ=0.9557;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227260744 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227260774 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9767;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227260873 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.6028;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227260896 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6043;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227260997 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5346;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227261134 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.5882;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227261246 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.822;LDAF=0.0118;AVGPOST=0.9982;RSQ=0.9353;ERATE=0.0003;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 227261290 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2285;AVGPOST=0.9988;RSQ=0.9970;ERATE=0.0005;THETA=0.0003;AC=498;AN=2184 GT:DS:GL:BD 0.22802198 0
1 227261309 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.762;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227261403 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2286;AVGPOST=0.9998;RSQ=0.9995;ERATE=0.0003;THETA=0.0001;AC=498;AN=2184 GT:DS:GL:BD 0.22802198 0
1 227261430 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227261490 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.8331;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227261517 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0234;AVGPOST=0.9999;RSQ=0.9983;ERATE=0.0003;THETA=0.0004;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 227261520 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1339;AVGPOST=1.0000;RSQ=0.9998;ERATE=0.0002;THETA=0.0002;AC=292;AN=2184 GT:DS:GL:BD 0.13369964 0
1 227261543 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227261602 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227261648 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0027;AVGPOST=1.0000;RSQ=0.9920;ERATE=0.0002;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227261684 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227261788 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227261858 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=1.0000;RSQ=0.9948;ERATE=0.0002;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227261933 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227262091 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227262147 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8316;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227262253 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.9471;ERATE=0.0002;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227262314 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1248;AVGPOST=0.9997;RSQ=0.9987;ERATE=0.0003;THETA=0.0002;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 227262333 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227262455 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6137;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227262535 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0020;AVGPOST=0.9994;RSQ=0.8725;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227262558 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5901;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227262570 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0077;AVGPOST=0.9943;RSQ=0.7597;ERATE=0.0003;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 227262575 . AAG A 243 PASS INDEL;BAVGPOST=0.999;BRSQ=0.834;LDAF=0.0036;AVGPOST=0.9998;RSQ=0.9734;ERATE=0.0002;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227262581 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1248;AVGPOST=0.9997;RSQ=0.9987;ERATE=0.0003;THETA=0.0002;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 227262636 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2192;AVGPOST=0.9981;RSQ=0.9954;ERATE=0.0003;THETA=0.0013;AC=478;AN=2184 GT:DS:GL:BD 0.21886447 0
1 227262640 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.777;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8872;ERATE=0.0005;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227262724 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2187;AVGPOST=0.9979;RSQ=0.9954;ERATE=0.0004;THETA=0.0002;AC=476;AN=2184 GT:DS:GL:BD 0.21794872 0
1 227262884 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8076;ERATE=0.0003;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227262890 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2955;AVGPOST=0.9985;RSQ=0.9970;ERATE=0.0004;THETA=0.0005;AC=646;AN=2184 GT:DS:GL:BD 0.29578754 0
1 227262921 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.968;LDAF=0.0502;AVGPOST=0.9976;RSQ=0.9804;ERATE=0.0003;THETA=0.0004;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 227262968 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7563;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227263016 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0399;AVGPOST=0.9998;RSQ=0.9972;ERATE=0.0002;THETA=0.0005;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 227263067 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.6374;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227263094 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1701;AVGPOST=0.9995;RSQ=0.9982;ERATE=0.0003;THETA=0.0003;AC=371;AN=2184 GT:DS:GL:BD 0.16987179 0
1 227263244 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.8898;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227263355 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0006;AVGPOST=0.9992;RSQ=0.4031;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227263362 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1248;AVGPOST=0.9994;RSQ=0.9975;ERATE=0.0003;THETA=0.0002;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 227263362 MERGED_DEL_2_7527 A <DEL> . . SV;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6536;ERATE=0.0004;THETA=0.0003;CIEND=-17,33;CIPOS=-18,19;END=227266372;SOURCE=GenomeStrip_227263362_227266372;SVTYPE=DEL;AC=2;AN GT:DS:GL:BD 0.00091575 0
1 227263429 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.845;LDAF=0.0075;AVGPOST=0.9990;RSQ=0.9286;ERATE=0.0003;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 227263491 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1299;AVGPOST=0.9990;RSQ=0.9973;ERATE=0.0003;THETA=0.0003;AC=285;AN=2184 GT:DS:GL:BD 0.13049451 0
1 227263498 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7784;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227263504 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6589;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227263688 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0079;AVGPOST=0.9998;RSQ=0.9860;ERATE=0.0002;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227263689 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227263698 . C CATTT 35 PASS INDEL;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4503;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227263946 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227263994 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9340;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227264115 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.535;LDAF=0.0034;AVGPOST=0.9982;RSQ=0.7660;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227264465 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9562;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227264480 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0107;AVGPOST=0.9976;RSQ=0.9084;ERATE=0.0003;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 227264559 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1714;AVGPOST=0.9971;RSQ=0.9921;ERATE=0.0005;THETA=0.0002;AC=372;AN=2184 GT:DS:GL:BD 0.17032968 0
1 227264679 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0388;AVGPOST=0.9997;RSQ=0.9973;ERATE=0.0003;THETA=0.0005;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 227264780 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1416;AVGPOST=0.9989;RSQ=0.9969;ERATE=0.0003;THETA=0.0001;AC=309;AN=2184 GT:DS:GL:BD 0.14148352 0
1 227264909 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0090;AVGPOST=0.9993;RSQ=0.9618;ERATE=0.0004;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 227264951 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9335;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227264992 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6361;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227265014 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8696;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227265044 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5345;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227265052 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0111;AVGPOST=0.9997;RSQ=0.9889;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 227265057 . TAATC T 36 PASS INDEL;BAVGPOST=1.000;BRSQ=0.722;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5747;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227265081 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.807;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7235;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227265193 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.945;LDAF=0.0142;AVGPOST=0.9987;RSQ=0.9638;ERATE=0.0002;THETA=0.0029;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 227265290 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0040;AVGPOST=0.9992;RSQ=0.9049;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227265345 . TTA T 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.726;LDAF=0.0015;AVGPOST=0.9982;RSQ=0.5304;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227265410 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4985;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227265720 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227265721 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7309;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227265831 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2949;AVGPOST=0.9980;RSQ=0.9957;ERATE=0.0007;THETA=0.0002;AC=644;AN=2184 GT:DS:GL:BD 0.29487181 0
1 227265925 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2281;AVGPOST=0.9979;RSQ=0.9949;ERATE=0.0006;THETA=0.0004;AC=498;AN=2184 GT:DS:GL:BD 0.22802198 0
1 227265948 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.853;LDAF=0.0087;AVGPOST=0.9975;RSQ=0.9077;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 227266113 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1241;AVGPOST=0.9992;RSQ=0.9967;ERATE=0.0002;THETA=0.0004;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 227266328 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8456;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227266442 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1247;AVGPOST=0.9998;RSQ=0.9991;ERATE=0.0002;THETA=0.0003;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 227266456 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227266499 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0023;AVGPOST=0.9998;RSQ=0.9626;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227266677 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2237;AVGPOST=0.9982;RSQ=0.9954;ERATE=0.0005;THETA=0.0003;AC=487;AN=2184 GT:DS:GL:BD 0.22298534 0
1 227266682 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9991;RSQ=0.8896;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227266707 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6884;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227266805 . G GT 334 PASS INDEL;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7966;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227266814 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.950;LDAF=0.0139;AVGPOST=0.9993;RSQ=0.9772;ERATE=0.0004;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 227266885 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5445;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227266945 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6705;ERATE=0.0002;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227267095 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5817;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227267151 . ACT A 53 PASS INDEL;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5213;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227267292 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6894;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227267362 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0037;AVGPOST=1.0000;RSQ=0.9941;ERATE=0.0002;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227267402 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0363;AVGPOST=0.9993;RSQ=0.9903;ERATE=0.0004;THETA=0.0004;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 227267533 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9764;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227267563 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.648;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.7702;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227267595 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.555;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.6088;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227267640 . A ATT 5576 PASS INDEL;BAVGPOST=0.964;BRSQ=0.917;LDAF=0.2853;AVGPOST=0.9654;RSQ=0.9329;ERATE=0.0042;THETA=0.0003;AC=625;AN=2184 GT:DS:GL:BD 0.28617215 0
1 227267647 rs72411183 T TG 5066 PASS INDEL;BAVGPOST=0.955;BRSQ=0.876;LDAF=0.2638;AVGPOST=0.9521;RSQ=0.8983;ERATE=0.0077;THETA=0.0032;AC=589;AN=2184 GT:DS:GL:BD 0.26968864 0
1 227267663 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.703;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227267706 rs34723231 AT A 14530 PASS INDEL;BAVGPOST=0.991;BRSQ=0.968;LDAF=0.1690;AVGPOST=0.9961;RSQ=0.9884;ERATE=0.0006;THETA=0.0003;AC=371;AN=2184 GT:DS:GL:BD 0.16987179 0
1 227267738 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0040;AVGPOST=0.9991;RSQ=0.8989;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227267755 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.989;LDAF=0.2944;AVGPOST=0.9921;RSQ=0.9853;ERATE=0.0014;THETA=0.0003;AC=644;AN=2184 GT:DS:GL:BD 0.29487181 0
1 227267756 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0016;AVGPOST=0.9975;RSQ=0.4050;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227267805 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0144;AVGPOST=0.9967;RSQ=0.9178;ERATE=0.0003;THETA=0.0002;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 227267823 . A AT 221 PASS INDEL;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8839;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227267956 rs66578333 TAC T 19315 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2258;AVGPOST=0.9924;RSQ=0.9825;ERATE=0.0011;THETA=0.0003;AC=490;AN=2184 GT:DS:GL:BD 0.22435898 0
1 227268030 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0595;AVGPOST=0.9996;RSQ=0.9974;ERATE=0.0003;THETA=0.0002;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 227268207 . G GT 186 PASS INDEL;BAVGPOST=0.999;BRSQ=0.598;LDAF=0.0067;AVGPOST=0.9907;RSQ=0.4692;ERATE=0.0008;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227268258 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1253;AVGPOST=0.9987;RSQ=0.9964;ERATE=0.0002;THETA=0.0004;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 227268488 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2950;AVGPOST=0.9995;RSQ=0.9991;ERATE=0.0002;THETA=0.0002;AC=644;AN=2184 GT:DS:GL:BD 0.29487181 0
1 227268537 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227268544 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0044;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227268601 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0032;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227268705 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=0.9999;RSQ=0.9841;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227268836 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2285;AVGPOST=1.0000;RSQ=0.9999;ERATE=0.0002;THETA=0.0004;AC=498;AN=2184 GT:DS:GL:BD 0.22802198 0
1 227268841 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227268933 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6717;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227268994 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0053;AVGPOST=0.9977;RSQ=0.8785;ERATE=0.0002;THETA=0.0001;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227269028 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1299;AVGPOST=0.9995;RSQ=0.9981;ERATE=0.0003;THETA=0.0003;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 227269150 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0086;AVGPOST=0.9998;RSQ=0.9888;ERATE=0.0002;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 227269176 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.773;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7286;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227269217 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2953;AVGPOST=0.9984;RSQ=0.9966;ERATE=0.0005;THETA=0.0002;AC=646;AN=2184 GT:DS:GL:BD 0.29578754 0
1 227269247 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0118;AVGPOST=0.9988;RSQ=0.9557;ERATE=0.0004;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227269265 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2234;AVGPOST=0.9975;RSQ=0.9939;ERATE=0.0004;THETA=0.0007;AC=487;AN=2184 GT:DS:GL:BD 0.22298534 0
1 227269266 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0390;AVGPOST=0.9993;RSQ=0.9929;ERATE=0.0003;THETA=0.0004;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 227269303 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.2220;AVGPOST=0.9979;RSQ=0.9947;ERATE=0.0007;THETA=0.0001;AC=484;AN=2184 GT:DS:GL:BD 0.22161172 0
1 227269311 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0663;AVGPOST=0.9980;RSQ=0.9874;ERATE=0.0004;THETA=0.0006;AC=144;AN=2184 GT:DS:GL:BD 0.06593407 0
1 227269459 . C CG 120 PASS INDEL;BAVGPOST=0.999;BRSQ=0.894;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5466;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227269533 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7232;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227269582 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1250;AVGPOST=0.9994;RSQ=0.9977;ERATE=0.0003;THETA=0.0001;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 227269589 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4861;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227269707 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1373;AVGPOST=0.9953;RSQ=0.9872;ERATE=0.0005;THETA=0.0003;AC=297;AN=2184 GT:DS:GL:BD 0.13598901 0
1 227269709 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.739;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7187;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227269739 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5016;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227269867 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1248;AVGPOST=0.9989;RSQ=0.9961;ERATE=0.0005;THETA=0.0004;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 227269966 rs10717998 CA C 70983 PASS INDEL;BAVGPOST=0.992;BRSQ=0.964;LDAF=0.8839;AVGPOST=0.9917;RSQ=0.9680;ERATE=0.0006;THETA=0.0010;AC=1934;AN=2184 GT:DS:GL:BD 0.88553113 1
1 227269994 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0093;AVGPOST=0.9986;RSQ=0.9315;ERATE=0.0005;THETA=0.0021;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 227270081 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5975;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227270187 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.974;LDAF=0.1251;AVGPOST=0.9981;RSQ=0.9939;ERATE=0.0004;THETA=0.0003;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 227270242 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.757;LDAF=0.0048;AVGPOST=0.9949;RSQ=0.5894;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227270277 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=0.9994;RSQ=0.9164;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227270308 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.873;LDAF=0.0629;AVGPOST=0.9949;RSQ=0.9664;ERATE=0.0004;THETA=0.0002;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 227270309 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.964;BRSQ=0.917;LDAF=0.2872;AVGPOST=0.9790;RSQ=0.9600;ERATE=0.0013;THETA=0.0003;AC=629;AN=2184 GT:DS:GL:BD 0.28800365 0
1 227270318 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.932;LDAF=0.1639;AVGPOST=0.9889;RSQ=0.9700;ERATE=0.0005;THETA=0.0005;AC=361;AN=2184 GT:DS:GL:BD 0.16529304 0
1 227270343 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.923;LDAF=0.3005;AVGPOST=0.9374;RSQ=0.8865;ERATE=0.0146;THETA=0.0003;AC=640;AN=2184 GT:DS:GL:BD 0.29304031 0
1 227270373 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.965;LDAF=0.1313;AVGPOST=0.9927;RSQ=0.9771;ERATE=0.0005;THETA=0.0008;AC=285;AN=2184 GT:DS:GL:BD 0.13049451 0
1 227270406 . ACT A 479 PASS INDEL;BAVGPOST=0.995;BRSQ=0.651;LDAF=0.0100;AVGPOST=0.9965;RSQ=0.8579;ERATE=0.0004;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 227270410 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.925;LDAF=0.2920;AVGPOST=0.9722;RSQ=0.9489;ERATE=0.0031;THETA=0.0009;AC=632;AN=2184 GT:DS:GL:BD 0.28937730 0
1 227270415 rs71574595 C CA 1553 PASS INDEL;BAVGPOST=0.580;BRSQ=0.252;LDAF=0.6232;AVGPOST=0.7668;RSQ=0.6027;ERATE=0.0097;THETA=0.0002;AC=1392;AN=2184 GT:DS:GL:BD 0.63736266 1
1 227270584 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2979;AVGPOST=0.9973;RSQ=0.9950;ERATE=0.0003;THETA=0.0006;AC=651;AN=2184 GT:DS:GL:BD 0.29807693 0
1 227270698 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4580;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227270757 . GT G 145 PASS INDEL;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0048;AVGPOST=0.9988;RSQ=0.9007;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227270828 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227270835 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6586;AVGPOST=0.9977;RSQ=0.9957;ERATE=0.0004;THETA=0.0003;AC=1438;AN=2184 GT:DS:GL:BD 0.65842491 1
1 227270851 . A ATC 7955 PASS INDEL;BAVGPOST=0.989;BRSQ=0.974;LDAF=0.2911;AVGPOST=0.9929;RSQ=0.9860;ERATE=0.0008;THETA=0.0001;AC=639;AN=2184 GT:DS:GL:BD 0.29258242 0
1 227270859 rs58943805 C CTT 34875 PASS INDEL;BAVGPOST=0.989;BRSQ=0.973;LDAF=0.2925;AVGPOST=0.9947;RSQ=0.9897;ERATE=0.0003;THETA=0.0004;AC=641;AN=2184 GT:DS:GL:BD 0.29349816 0
1 227270914 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1248;AVGPOST=0.9994;RSQ=0.9975;ERATE=0.0003;THETA=0.0029;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 227270916 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0021;AVGPOST=0.9991;RSQ=0.8034;ERATE=0.0003;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227270981 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.927;LDAF=0.0638;AVGPOST=0.9982;RSQ=0.9878;ERATE=0.0003;THETA=0.0003;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 227270982 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.935;LDAF=0.1271;AVGPOST=0.9851;RSQ=0.9493;ERATE=0.0021;THETA=0.0002;AC=276;AN=2184 GT:DS:GL:BD 0.12637363 0
1 227270983 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0123;AVGPOST=0.9978;RSQ=0.9356;ERATE=0.0004;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227271029 . G GA 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4892;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227271067 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.3692;ERATE=0.0003;THETA=0.0041;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227271142 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6192;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227271145 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.810;LDAF=0.0159;AVGPOST=0.9983;RSQ=0.9537;ERATE=0.0003;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 227271194 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.2933;AVGPOST=0.9967;RSQ=0.9933;ERATE=0.0005;THETA=0.0002;AC=641;AN=2184 GT:DS:GL:BD 0.29349816 0
1 227271204 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.643;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.7802;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227271244 rs72518630 TTTTTGA T 17985 PASS INDEL;BAVGPOST=0.994;BRSQ=0.978;LDAF=0.1691;AVGPOST=0.9949;RSQ=0.9853;ERATE=0.0013;THETA=0.0026;AC=369;AN=2184 GT:DS:GL:BD 0.16895604 0
1 227271302 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.981;LDAF=0.1645;AVGPOST=0.9973;RSQ=0.9915;ERATE=0.0006;THETA=0.0004;AC=361;AN=2184 GT:DS:GL:BD 0.16529304 0
1 227271369 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.959;LDAF=0.0100;AVGPOST=0.9993;RSQ=0.9694;ERATE=0.0002;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 227271384 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1247;AVGPOST=0.9995;RSQ=0.9981;ERATE=0.0003;THETA=0.0004;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 227271443 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7029;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227271468 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5540;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227271519 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0030;AVGPOST=0.9993;RSQ=0.9205;ERATE=0.0002;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227271521 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5797;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227271549 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.8025;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227271550 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6434;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227271580 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0015;AVGPOST=0.9990;RSQ=0.7853;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227271792 . GACT G 6655 PASS INDEL;BAVGPOST=0.986;BRSQ=0.953;LDAF=0.1597;AVGPOST=0.9860;RSQ=0.9636;ERATE=0.0007;THETA=0.0004;AC=352;AN=2184 GT:DS:GL:BD 0.16117217 0
1 227271793 rs34912508 ACTT A 20016 PASS INDEL;BAVGPOST=0.986;BRSQ=0.956;LDAF=0.1634;AVGPOST=0.9902;RSQ=0.9750;ERATE=0.0004;THETA=0.0006;AC=358;AN=2184 GT:DS:GL:BD 0.16391942 0
1 227271843 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7051;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227271855 . A ATAGC 458 PASS INDEL;BAVGPOST=1.000;BRSQ=0.766;LDAF=0.0021;AVGPOST=0.9978;RSQ=0.5537;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227271859 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8540;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227271924 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.855;LDAF=0.0124;AVGPOST=0.9967;RSQ=0.8973;ERATE=0.0003;THETA=0.0002;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 227272033 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.937;LDAF=0.0189;AVGPOST=0.9978;RSQ=0.9509;ERATE=0.0004;THETA=0.0007;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 227272090 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0363;AVGPOST=0.9993;RSQ=0.9909;ERATE=0.0004;THETA=0.0003;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 227272139 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.963;LDAF=0.2900;AVGPOST=0.9895;RSQ=0.9792;ERATE=0.0018;THETA=0.0003;AC=636;AN=2184 GT:DS:GL:BD 0.29120880 0
1 227272270 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6694;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227272373 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2943;AVGPOST=0.9985;RSQ=0.9967;ERATE=0.0004;THETA=0.0005;AC=642;AN=2184 GT:DS:GL:BD 0.29395604 0
1 227272460 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5957;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227272527 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1248;AVGPOST=0.9999;RSQ=0.9994;ERATE=0.0002;THETA=0.0003;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 227272546 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1592;AVGPOST=0.9988;RSQ=0.9963;ERATE=0.0003;THETA=0.0014;AC=348;AN=2184 GT:DS:GL:BD 0.15934066 0
1 227272569 . TGA T 26574 PASS INDEL;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.2946;AVGPOST=0.9978;RSQ=0.9951;ERATE=0.0004;THETA=0.0002;AC=643;AN=2184 GT:DS:GL:BD 0.29441392 0
1 227272573 . AG A 268 PASS INDEL;BAVGPOST=0.862;BRSQ=0.622;LDAF=0.1720;AVGPOST=0.8783;RSQ=0.7249;ERATE=0.0052;THETA=0.0003;AC=367;AN=2184 GT:DS:GL:BD 0.16804029 0
1 227272658 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0005;AVGPOST=0.9991;RSQ=0.2944;ERATE=0.0003;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 227272690 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.897;LDAF=0.0079;AVGPOST=0.9982;RSQ=0.9133;ERATE=0.0003;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 227272697 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0038;AVGPOST=0.9993;RSQ=0.9425;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227272748 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8455;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227272757 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8887;ERATE=0.0002;THETA=0.0025;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227272782 . G GGTCT 1151 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=1.0000;RSQ=0.9957;ERATE=0.0002;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227272799 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1304;AVGPOST=0.9947;RSQ=0.9844;ERATE=0.0004;THETA=0.0003;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 227272809 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0599;AVGPOST=0.9993;RSQ=0.9958;ERATE=0.0003;THETA=0.0005;AC=131;AN=2184 GT:DS:GL:BD 0.05998169 0
1 227272836 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6288;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227272939 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6697;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227273031 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7564;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227273038 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9424;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227273251 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.1581;AVGPOST=0.9993;RSQ=0.9978;ERATE=0.0003;THETA=0.0006;AC=346;AN=2184 GT:DS:GL:BD 0.15842491 0
1 227273272 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0042;AVGPOST=0.9996;RSQ=0.9545;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227273305 . AAAC A 2738 PASS INDEL;BAVGPOST=0.995;BRSQ=0.854;LDAF=0.0204;AVGPOST=0.9935;RSQ=0.8800;ERATE=0.0013;THETA=0.0002;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 227273344 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227273378 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6088;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227273586 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0395;AVGPOST=0.9988;RSQ=0.9861;ERATE=0.0003;THETA=0.0009;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 227273669 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7093;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227273699 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.936;LDAF=0.0412;AVGPOST=0.9919;RSQ=0.9298;ERATE=0.0003;THETA=0.0013;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 227273806 . ACTT A 1653 PASS INDEL;BAVGPOST=0.995;BRSQ=0.930;LDAF=0.0388;AVGPOST=0.9980;RSQ=0.9770;ERATE=0.0003;THETA=0.0003;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 227273807 rs78488211 CTTCT C 9435 PASS INDEL;BAVGPOST=0.995;BRSQ=0.930;LDAF=0.0393;AVGPOST=0.9975;RSQ=0.9748;ERATE=0.0002;THETA=0.0003;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 227273827 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6746;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227273913 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5846;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227273932 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227273980 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.979;LDAF=0.2659;AVGPOST=0.9959;RSQ=0.9917;ERATE=0.0005;THETA=0.0004;AC=578;AN=2184 GT:DS:GL:BD 0.26465201 0
1 227274063 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6468;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227274098 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7691;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227274166 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8476;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227274199 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0080;AVGPOST=0.9995;RSQ=0.9740;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227274425 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0158;AVGPOST=0.9995;RSQ=0.9857;ERATE=0.0003;THETA=0.0002;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 227274480 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5898;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227274518 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.2945;AVGPOST=0.9987;RSQ=0.9970;ERATE=0.0005;THETA=0.0003;AC=644;AN=2184 GT:DS:GL:BD 0.29487181 0
1 227274591 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6577;AVGPOST=0.9992;RSQ=0.9984;ERATE=0.0003;THETA=0.0002;AC=1436;AN=2184 GT:DS:GL:BD 0.65750915 1
1 227274835 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.8202;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227274850 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4655;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227274916 . TTTGAG T 12700 PASS INDEL;BAVGPOST=0.986;BRSQ=0.930;LDAF=0.0979;AVGPOST=0.9945;RSQ=0.9711;ERATE=0.0006;THETA=0.0004;AC=214;AN=2184 GT:DS:GL:BD 0.09798535 0
1 227274934 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5548;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227275091 rs60003160 C CTTCAT 47389 PASS INDEL;BAVGPOST=0.979;BRSQ=0.953;LDAF=0.2873;AVGPOST=0.9888;RSQ=0.9776;ERATE=0.0017;THETA=0.0002;AC=627;AN=2184 GT:DS:GL:BD 0.28708792 0
1 227275094 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.6205;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227275124 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5493;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227275213 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.822;LDAF=0.0050;AVGPOST=0.9967;RSQ=0.7511;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227275267 . GC G 5 PASS INDEL;BAVGPOST=0.999;BRSQ=0.724;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.5686;ERATE=0.0006;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227275284 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0059;AVGPOST=0.9994;RSQ=0.9625;ERATE=0.0002;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227275306 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.894;LDAF=0.0093;AVGPOST=0.9981;RSQ=0.9188;ERATE=0.0003;THETA=0.0009;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 227275506 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1650;AVGPOST=0.9996;RSQ=0.9988;ERATE=0.0003;THETA=0.0029;AC=361;AN=2184 GT:DS:GL:BD 0.16529304 0
1 227275550 . TG T 118 PASS INDEL;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227275562 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6980;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227275672 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5775;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227275821 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5420;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227275900 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5787;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227275946 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0362;AVGPOST=0.9995;RSQ=0.9933;ERATE=0.0002;THETA=0.0003;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 227275967 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6548;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227275981 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6576;AVGPOST=0.9985;RSQ=0.9972;ERATE=0.0003;THETA=0.0005;AC=1436;AN=2184 GT:DS:GL:BD 0.65750915 1
1 227276092 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0128;AVGPOST=0.9995;RSQ=0.9797;ERATE=0.0003;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 227276184 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0134;AVGPOST=0.9977;RSQ=0.9391;ERATE=0.0003;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 227276238 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0392;AVGPOST=0.9993;RSQ=0.9932;ERATE=0.0003;THETA=0.0003;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 227276425 . GAT G 266 PASS INDEL;BAVGPOST=0.984;BRSQ=0.601;LDAF=0.0459;AVGPOST=0.9423;RSQ=0.4943;ERATE=0.0114;THETA=0.0011;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 227276514 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1721;AVGPOST=0.9946;RSQ=0.9844;ERATE=0.0009;THETA=0.0047;AC=371;AN=2184 GT:DS:GL:BD 0.16987179 0
1 227276670 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0123;AVGPOST=0.9933;RSQ=0.7892;ERATE=0.0006;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 227277103 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0031;AVGPOST=0.9990;RSQ=0.8826;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227277255 . AC A 1436 PASS INDEL;BAVGPOST=0.998;BRSQ=0.935;LDAF=0.0155;AVGPOST=0.9961;RSQ=0.8939;ERATE=0.0006;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 227277276 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2944;AVGPOST=0.9985;RSQ=0.9966;ERATE=0.0004;THETA=0.0001;AC=643;AN=2184 GT:DS:GL:BD 0.29441392 0
1 227277338 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.888;LDAF=0.1150;AVGPOST=0.9796;RSQ=0.9203;ERATE=0.0034;THETA=0.0002;AC=255;AN=2184 GT:DS:GL:BD 0.11675824 0
1 227277397 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2945;AVGPOST=0.9990;RSQ=0.9977;ERATE=0.0004;THETA=0.0003;AC=643;AN=2184 GT:DS:GL:BD 0.29441392 0
1 227277443 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0007;AVGPOST=0.9990;RSQ=0.4008;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227277523 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0596;AVGPOST=0.9981;RSQ=0.9884;ERATE=0.0005;THETA=0.0005;AC=131;AN=2184 GT:DS:GL:BD 0.05998169 0
1 227277577 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.4640;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227277606 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.904;LDAF=0.0085;AVGPOST=0.9992;RSQ=0.9571;ERATE=0.0004;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 227277720 . T TG 28228 PASS INDEL;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2965;AVGPOST=0.9942;RSQ=0.9878;ERATE=0.0016;THETA=0.0003;AC=646;AN=2184 GT:DS:GL:BD 0.29578754 0
1 227277728 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2240;AVGPOST=0.9968;RSQ=0.9922;ERATE=0.0005;THETA=0.0005;AC=489;AN=2184 GT:DS:GL:BD 0.22390109 0
1 227277735 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.808;LDAF=0.0024;AVGPOST=0.9990;RSQ=0.8361;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227277984 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.737;LDAF=0.0079;AVGPOST=0.9969;RSQ=0.8313;ERATE=0.0005;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 227277993 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0014;AVGPOST=0.9979;RSQ=0.4150;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227278129 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0208;AVGPOST=0.9993;RSQ=0.9884;ERATE=0.0003;THETA=0.0002;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 227278139 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5792;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227278266 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.946;LDAF=0.2835;AVGPOST=0.9554;RSQ=0.9157;ERATE=0.0066;THETA=0.0004;AC=621;AN=2184 GT:DS:GL:BD 0.28434065 0
1 227278307 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.688;LDAF=0.0023;AVGPOST=0.9982;RSQ=0.6911;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227278342 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.2947;AVGPOST=0.9978;RSQ=0.9953;ERATE=0.0006;THETA=0.0003;AC=643;AN=2184 GT:DS:GL:BD 0.29441392 0
1 227278372 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.621;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7061;ERATE=0.0003;THETA=0.0030;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227278375 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0084;AVGPOST=0.9986;RSQ=0.9392;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227278474 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.985;LDAF=0.2945;AVGPOST=0.9963;RSQ=0.9932;ERATE=0.0008;THETA=0.0003;AC=644;AN=2184 GT:DS:GL:BD 0.29487181 0
1 227278490 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6617;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227278510 . AAAAC A 703 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0064;AVGPOST=0.9982;RSQ=0.9129;ERATE=0.0004;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227278545 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2944;AVGPOST=0.9999;RSQ=0.9997;ERATE=0.0002;THETA=0.0002;AC=643;AN=2184 GT:DS:GL:BD 0.29441392 0
1 227278564 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2945;AVGPOST=0.9993;RSQ=0.9984;ERATE=0.0003;THETA=0.0004;AC=643;AN=2184 GT:DS:GL:BD 0.29441392 0
1 227278692 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0106;AVGPOST=0.9999;RSQ=0.9942;ERATE=0.0002;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 227278813 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9830;ERATE=0.0002;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227278853 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0089;AVGPOST=0.9995;RSQ=0.9718;ERATE=0.0003;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 227278899 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.980;LDAF=0.0617;AVGPOST=0.9988;RSQ=0.9925;ERATE=0.0003;THETA=0.0003;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 227279016 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.898;LDAF=0.0042;AVGPOST=0.9973;RSQ=0.7632;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227279035 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0008;AVGPOST=0.9989;RSQ=0.5294;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227279247 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1304;AVGPOST=0.9992;RSQ=0.9971;ERATE=0.0003;THETA=0.0015;AC=285;AN=2184 GT:DS:GL:BD 0.13049451 0
1 227279325 . A AT 36917 PASS INDEL;BAVGPOST=0.989;BRSQ=0.962;LDAF=0.8292;AVGPOST=0.9891;RSQ=0.9704;ERATE=0.0003;THETA=0.0002;AC=1813;AN=2184 GT:DS:GL:BD 0.83012819 1
1 227279326 rs11427392 T TA 112923 PASS INDEL;BAVGPOST=0.989;BRSQ=0.962;LDAF=0.8293;AVGPOST=0.9904;RSQ=0.9737;ERATE=0.0004;THETA=0.0002;AC=1812;AN=2184 GT:DS:GL:BD 0.82967031 1
1 227279548 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227279626 . TAAC T 231 PASS INDEL;BAVGPOST=1.000;BRSQ=0.731;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.4938;ERATE=0.0005;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227279717 . G GA 57 PASS INDEL;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8227;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227279786 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8316;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227279883 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2284;AVGPOST=0.9997;RSQ=0.9993;ERATE=0.0003;THETA=0.0003;AC=498;AN=2184 GT:DS:GL:BD 0.22802198 0
1 227279903 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227279904 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1699;AVGPOST=0.9996;RSQ=0.9989;ERATE=0.0002;THETA=0.0004;AC=371;AN=2184 GT:DS:GL:BD 0.16987179 0
1 227280005 . AC A 858 PASS INDEL;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0055;AVGPOST=0.9989;RSQ=0.9125;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227280012 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.648;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6951;ERATE=0.0007;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227280020 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=0.9998;RSQ=0.9887;ERATE=0.0002;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227280087 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2941;AVGPOST=0.9974;RSQ=0.9952;ERATE=0.0012;THETA=0.0004;AC=642;AN=2184 GT:DS:GL:BD 0.29395604 0
1 227280143 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1245;AVGPOST=0.9995;RSQ=0.9981;ERATE=0.0002;THETA=0.0002;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 227280180 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9247;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227280222 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1346;AVGPOST=0.9986;RSQ=0.9956;ERATE=0.0003;THETA=0.0002;AC=292;AN=2184 GT:DS:GL:BD 0.13369964 0
1 227280230 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0018;AVGPOST=0.9987;RSQ=0.6944;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227280401 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0082;AVGPOST=0.9992;RSQ=0.9551;ERATE=0.0004;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227280410 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.680;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7966;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227280520 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0327;AVGPOST=0.9994;RSQ=0.9909;ERATE=0.0004;THETA=0.0003;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 227280641 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8501;AVGPOST=0.9994;RSQ=0.9977;ERATE=0.0003;THETA=0.0002;AC=1857;AN=2184 GT:DS:GL:BD 0.85027474 1
1 227280686 . AC A 516 PASS INDEL;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9670;ERATE=0.0003;THETA=0.0001;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227280687 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9319;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227280717 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.6629;AVGPOST=0.9981;RSQ=0.9966;ERATE=0.0003;THETA=0.0007;AC=1449;AN=2184 GT:DS:GL:BD 0.66346157 1
1 227280734 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.3589;AVGPOST=0.9990;RSQ=0.9980;ERATE=0.0003;THETA=0.0003;AC=784;AN=2184 GT:DS:GL:BD 0.35897437 0
1 227280737 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8501;AVGPOST=0.9991;RSQ=0.9969;ERATE=0.0003;THETA=0.0003;AC=1857;AN=2184 GT:DS:GL:BD 0.85027474 1
1 227281409 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9773;ERATE=0.0002;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227281433 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1341;AVGPOST=0.9989;RSQ=0.9963;ERATE=0.0004;THETA=0.0004;AC=292;AN=2184 GT:DS:GL:BD 0.13369964 0
1 227281455 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.590;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5839;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227281511 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0064;AVGPOST=0.9983;RSQ=0.8954;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227281544 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.763;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8889;ERATE=0.0002;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227281551 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0002;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227281557 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1341;AVGPOST=0.9992;RSQ=0.9969;ERATE=0.0003;THETA=0.0003;AC=292;AN=2184 GT:DS:GL:BD 0.13369964 0
1 227281572 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.948;LDAF=0.9862;AVGPOST=0.9976;RSQ=0.9403;ERATE=0.0005;THETA=0.0002;AC=2156;AN=2184 GT:DS:GL:BD 0.98717946 1
1 227281579 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0039;AVGPOST=0.9991;RSQ=0.9030;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227281690 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227281715 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2947;AVGPOST=0.9989;RSQ=0.9976;ERATE=0.0004;THETA=0.0008;AC=643;AN=2184 GT:DS:GL:BD 0.29441392 0
1 227281814 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0326;AVGPOST=0.9997;RSQ=0.9955;ERATE=0.0003;THETA=0.0003;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 227282026 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.509;LDAF=0.0085;AVGPOST=0.9884;RSQ=0.4771;ERATE=0.0025;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227282204 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0035;AVGPOST=0.9988;RSQ=0.8536;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227282217 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2282;AVGPOST=0.9990;RSQ=0.9974;ERATE=0.0004;THETA=0.0002;AC=498;AN=2184 GT:DS:GL:BD 0.22802198 0
1 227282250 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0146;AVGPOST=0.9992;RSQ=0.9774;ERATE=0.0003;THETA=0.0007;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 227282351 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1699;AVGPOST=0.9995;RSQ=0.9983;ERATE=0.0002;THETA=0.0003;AC=371;AN=2184 GT:DS:GL:BD 0.16987179 0
1 227282399 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8260;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227282421 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6009;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227282451 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9596;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227282471 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6915;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227282558 . CAA C 603 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9387;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227282619 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0043;AVGPOST=0.9983;RSQ=0.8552;ERATE=0.0005;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227282803 . GC G 368 PASS INDEL;BAVGPOST=0.999;BRSQ=0.739;LDAF=0.0029;AVGPOST=0.9993;RSQ=0.9014;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227282827 . C CT 28 PASS INDEL;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6209;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227282833 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2175;AVGPOST=0.9991;RSQ=0.9975;ERATE=0.0003;THETA=0.0003;AC=474;AN=2184 GT:DS:GL:BD 0.21703297 0
1 227282924 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0002;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227282955 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.5940;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227282957 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.717;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7272;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227283122 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6589;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227283152 rs67020193 A AT 65141 PASS INDEL;BAVGPOST=0.978;BRSQ=0.958;LDAF=0.6388;AVGPOST=0.9590;RSQ=0.9330;ERATE=0.0102;THETA=0.0004;AC=1402;AN=2184 GT:DS:GL:BD 0.64194137 1
1 227283154 . T TA 7521 PASS INDEL;BAVGPOST=0.957;BRSQ=0.922;LDAF=0.5883;AVGPOST=0.8983;RSQ=0.8398;ERATE=0.0334;THETA=0.0003;AC=1314;AN=2184 GT:DS:GL:BD 0.60164833 1
1 227283257 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.815;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9212;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227283276 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6305;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227283355 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.655;LDAF=0.0171;AVGPOST=0.9898;RSQ=0.7628;ERATE=0.0010;THETA=0.0005;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 227283418 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4485;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227283502 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0116;AVGPOST=0.9986;RSQ=0.9463;ERATE=0.0004;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 227283520 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0344;AVGPOST=0.9961;RSQ=0.9552;ERATE=0.0007;THETA=0.0002;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 227283614 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6576;AVGPOST=0.9989;RSQ=0.9977;ERATE=0.0004;THETA=0.0002;AC=1436;AN=2184 GT:DS:GL:BD 0.65750915 1
1 227283712 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.855;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9369;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227283901 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.827;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7406;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227284000 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6470;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227284005 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0208;AVGPOST=0.9995;RSQ=0.9925;ERATE=0.0003;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 227284024 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6588;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227284076 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7921;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227284146 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227284165 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1246;AVGPOST=0.9992;RSQ=0.9969;ERATE=0.0003;THETA=0.0003;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 227284167 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1339;AVGPOST=0.9998;RSQ=0.9991;ERATE=0.0003;THETA=0.0002;AC=292;AN=2184 GT:DS:GL:BD 0.13369964 0
1 227284276 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227284348 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227284369 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0040;AVGPOST=0.9992;RSQ=0.9289;ERATE=0.0002;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227284568 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6512;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227284708 . C CT 48 PASS INDEL;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6010;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227284743 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9359;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227284841 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5644;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227284923 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0130;AVGPOST=0.9995;RSQ=0.9813;ERATE=0.0002;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 227284947 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1338;AVGPOST=0.9995;RSQ=0.9982;ERATE=0.0003;THETA=0.0003;AC=292;AN=2184 GT:DS:GL:BD 0.13369964 0
1 227284955 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227285029 rs79884444 ATATTGC A 88879 PASS INDEL;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.6483;AVGPOST=0.9740;RSQ=0.9583;ERATE=0.0051;THETA=0.0011;AC=1425;AN=2184 GT:DS:GL:BD 0.65247256 1
1 227285062 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6852;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227285066 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8303;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227285073 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2176;AVGPOST=0.9996;RSQ=0.9990;ERATE=0.0003;THETA=0.0003;AC=474;AN=2184 GT:DS:GL:BD 0.21703297 0
1 227285075 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2942;AVGPOST=0.9995;RSQ=0.9987;ERATE=0.0003;THETA=0.0003;AC=643;AN=2184 GT:DS:GL:BD 0.29441392 0
1 227285127 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1701;AVGPOST=0.9998;RSQ=0.9994;ERATE=0.0002;THETA=0.0004;AC=371;AN=2184 GT:DS:GL:BD 0.16987179 0
1 227285143 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0091;AVGPOST=0.9992;RSQ=0.9636;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 227285199 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7781;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227285244 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1860;AVGPOST=0.9988;RSQ=0.9966;ERATE=0.0003;THETA=0.0005;AC=405;AN=2184 GT:DS:GL:BD 0.18543956 0
1 227285434 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227285462 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8824;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227285534 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7195;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227285541 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6674;ERATE=0.0003;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227285574 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7227;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227285635 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2073;AVGPOST=0.9990;RSQ=0.9974;ERATE=0.0003;THETA=0.0006;AC=452;AN=2184 GT:DS:GL:BD 0.20695971 0
1 227285649 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7561;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227285668 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0018;AVGPOST=0.9999;RSQ=0.9768;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227285708 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0327;AVGPOST=0.9996;RSQ=0.9944;ERATE=0.0003;THETA=0.0008;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 227285815 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1699;AVGPOST=0.9996;RSQ=0.9987;ERATE=0.0003;THETA=0.0003;AC=371;AN=2184 GT:DS:GL:BD 0.16987179 0
1 227285856 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8338;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227285868 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0110;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 227285929 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0647;AVGPOST=0.9994;RSQ=0.9964;ERATE=0.0003;THETA=0.0007;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 227285941 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7891;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227285971 . AT A 971 PASS INDEL;BAVGPOST=0.933;BRSQ=0.738;LDAF=0.1429;AVGPOST=0.9612;RSQ=0.8886;ERATE=0.0020;THETA=0.0004;AC=321;AN=2184 GT:DS:GL:BD 0.14697802 0
1 227286161 . GCT G 82 PASS INDEL;BAVGPOST=0.997;BRSQ=0.899;LDAF=0.0151;AVGPOST=0.9981;RSQ=0.9587;ERATE=0.0002;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 227286162 . CTCTT C 3152 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0157;AVGPOST=0.9997;RSQ=0.9917;ERATE=0.0002;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 227286186 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0110;AVGPOST=0.9999;RSQ=0.9944;ERATE=0.0003;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 227286300 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0110;AVGPOST=0.9999;RSQ=0.9944;ERATE=0.0002;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 227286354 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227286400 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0328;AVGPOST=0.9994;RSQ=0.9912;ERATE=0.0003;THETA=0.0005;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 227286461 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.664;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227286627 . CCATTAGTCCATAATG C 822 PASS INDEL;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0035;AVGPOST=0.9991;RSQ=0.8781;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227286640 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0146;AVGPOST=0.9992;RSQ=0.9782;ERATE=0.0002;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 227286652 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.1299;AVGPOST=0.9985;RSQ=0.9947;ERATE=0.0005;THETA=0.0002;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 227286803 . TA T 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5754;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227286814 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1700;AVGPOST=0.9996;RSQ=0.9988;ERATE=0.0002;THETA=0.0008;AC=371;AN=2184 GT:DS:GL:BD 0.16987179 0
1 227286878 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.2958;AVGPOST=0.9987;RSQ=0.9971;ERATE=0.0003;THETA=0.0002;AC=647;AN=2184 GT:DS:GL:BD 0.29624543 0
1 227286909 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2959;AVGPOST=0.9991;RSQ=0.9980;ERATE=0.0003;THETA=0.0006;AC=647;AN=2184 GT:DS:GL:BD 0.29624543 0
1 227286931 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.6593;AVGPOST=0.9983;RSQ=0.9965;ERATE=0.0004;THETA=0.0002;AC=1440;AN=2184 GT:DS:GL:BD 0.65934068 1
1 227287003 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9049;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227287012 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0161;AVGPOST=0.9989;RSQ=0.9709;ERATE=0.0004;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 227287302 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0136;AVGPOST=0.9984;RSQ=0.9454;ERATE=0.0003;THETA=0.0002;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 227287313 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0624;AVGPOST=0.9990;RSQ=0.9931;ERATE=0.0003;THETA=0.0004;AC=136;AN=2184 GT:DS:GL:BD 0.06227106 0
1 227287520 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5375;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227287627 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1243;AVGPOST=0.9997;RSQ=0.9987;ERATE=0.0003;THETA=0.0001;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 227287685 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6371;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227287692 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8118;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227287707 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6272;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227287735 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.5762;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227287814 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6938;ERATE=0.0002;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227287863 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2940;AVGPOST=0.9990;RSQ=0.9980;ERATE=0.0003;THETA=0.0002;AC=643;AN=2184 GT:DS:GL:BD 0.29441392 0
1 227287887 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.1244;AVGPOST=0.9992;RSQ=0.9971;ERATE=0.0003;THETA=0.0004;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 227287902 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0046;AVGPOST=0.9989;RSQ=0.9046;ERATE=0.0002;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227287907 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227287928 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0032;AVGPOST=0.9995;RSQ=0.9322;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227288049 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0649;AVGPOST=0.9989;RSQ=0.9929;ERATE=0.0003;THETA=0.0003;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 227288125 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227288138 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227288267 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0110;AVGPOST=0.9998;RSQ=0.9928;ERATE=0.0002;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 227288294 rs71724599 GTTTC G 21985 PASS INDEL;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2189;AVGPOST=0.9966;RSQ=0.9920;ERATE=0.0006;THETA=0.0002;AC=477;AN=2184 GT:DS:GL:BD 0.21840659 0
1 227288305 rs58177394 TC T 2945 PASS INDEL;BAVGPOST=0.953;BRSQ=0.842;LDAF=0.1852;AVGPOST=0.9521;RSQ=0.8771;ERATE=0.0093;THETA=0.0003;AC=411;AN=2184 GT:DS:GL:BD 0.18818681 0
1 227288330 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0326;AVGPOST=0.9997;RSQ=0.9957;ERATE=0.0002;THETA=0.0004;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 227288350 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227288364 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1273;AVGPOST=0.9982;RSQ=0.9937;ERATE=0.0004;THETA=0.0003;AC=278;AN=2184 GT:DS:GL:BD 0.12728938 0
1 227288383 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2222;AVGPOST=0.9986;RSQ=0.9967;ERATE=0.0003;THETA=0.0004;AC=485;AN=2184 GT:DS:GL:BD 0.22206959 0
1 227288430 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.968;LDAF=0.3019;AVGPOST=0.9729;RSQ=0.9530;ERATE=0.0121;THETA=0.0003;AC=654;AN=2184 GT:DS:GL:BD 0.29945055 0
1 227288571 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1243;AVGPOST=1.0000;RSQ=0.9998;ERATE=0.0002;THETA=0.0003;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 227288655 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.973;LDAF=0.8341;AVGPOST=0.9882;RSQ=0.9672;ERATE=0.0039;THETA=0.0013;AC=1828;AN=2184 GT:DS:GL:BD 0.83699632 1
1 227288711 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0002;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 227288843 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227288876 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0002;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 227288917 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227288975 . CAAG C 57 PASS INDEL;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5520;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227289078 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2943;AVGPOST=0.9998;RSQ=0.9996;ERATE=0.0003;THETA=0.0005;AC=643;AN=2184 GT:DS:GL:BD 0.29441392 0
1 227289081 . TACTA T 373 PASS INDEL;BAVGPOST=0.998;BRSQ=0.695;LDAF=0.0086;AVGPOST=0.9935;RSQ=0.6809;ERATE=0.0010;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227289103 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.971;LDAF=0.0360;AVGPOST=0.9979;RSQ=0.9790;ERATE=0.0003;THETA=0.0003;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 227289113 rs35736619 AT A 10463 PASS INDEL;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1258;AVGPOST=0.9979;RSQ=0.9921;ERATE=0.0003;THETA=0.0003;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 227289186 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6151;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227289423 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6789;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227289580 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0069;AVGPOST=0.9992;RSQ=0.9566;ERATE=0.0002;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 227289734 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.2955;AVGPOST=0.9973;RSQ=0.9950;ERATE=0.0004;THETA=0.0003;AC=643;AN=2184 GT:DS:GL:BD 0.29441392 0
1 227289846 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0110;AVGPOST=0.9993;RSQ=0.9763;ERATE=0.0003;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 227289868 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227289869 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7608;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227289879 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2285;AVGPOST=0.9992;RSQ=0.9979;ERATE=0.0003;THETA=0.0008;AC=498;AN=2184 GT:DS:GL:BD 0.22802198 0
1 227289889 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1338;AVGPOST=0.9992;RSQ=0.9969;ERATE=0.0004;THETA=0.0003;AC=292;AN=2184 GT:DS:GL:BD 0.13369964 0
1 227289913 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2940;AVGPOST=0.9987;RSQ=0.9972;ERATE=0.0004;THETA=0.0003;AC=643;AN=2184 GT:DS:GL:BD 0.29441392 0
1 227289967 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=0.9998;RSQ=0.9861;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227289976 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6040;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227290059 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0018;AVGPOST=0.9987;RSQ=0.7517;ERATE=0.0002;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227290139 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8497;AVGPOST=0.9986;RSQ=0.9954;ERATE=0.0003;THETA=0.0008;AC=1857;AN=2184 GT:DS:GL:BD 0.85027474 1
1 227290257 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9998;RSQ=0.9710;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227290266 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1199;AVGPOST=0.9980;RSQ=0.9940;ERATE=0.0003;THETA=0.0004;AC=261;AN=2184 GT:DS:GL:BD 0.11950549 0
1 227290344 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0020;AVGPOST=0.9977;RSQ=0.5805;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227290364 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0025;AVGPOST=0.9983;RSQ=0.7320;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227290397 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.842;LDAF=0.0102;AVGPOST=0.9968;RSQ=0.8759;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 227290452 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.636;LDAF=0.0036;AVGPOST=0.9977;RSQ=0.7636;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227290463 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.744;LDAF=0.0032;AVGPOST=0.9988;RSQ=0.8447;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227290475 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.5212;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227290511 rs113820132 GAATT G 15817 PASS INDEL;BAVGPOST=0.995;BRSQ=0.987;LDAF=0.1249;AVGPOST=0.9953;RSQ=0.9842;ERATE=0.0007;THETA=0.0004;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 227290539 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1302;AVGPOST=0.9987;RSQ=0.9951;ERATE=0.0004;THETA=0.0003;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 227290655 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.5938;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227290710 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5471;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227290754 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.775;LDAF=0.0028;AVGPOST=0.9988;RSQ=0.8508;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227290808 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227290987 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1247;AVGPOST=0.9984;RSQ=0.9934;ERATE=0.0006;THETA=0.0003;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 227290990 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4697;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227291200 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0041;AVGPOST=0.9988;RSQ=0.8807;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227291271 . TG T 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5453;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227291412 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7476;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227291424 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6581;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227291493 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2946;AVGPOST=0.9977;RSQ=0.9950;ERATE=0.0008;THETA=0.0002;AC=644;AN=2184 GT:DS:GL:BD 0.29487181 0
1 227291515 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0050;AVGPOST=0.9953;RSQ=0.6581;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227291726 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.951;LDAF=0.0161;AVGPOST=0.9984;RSQ=0.9578;ERATE=0.0002;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 227291760 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1244;AVGPOST=0.9993;RSQ=0.9972;ERATE=0.0004;THETA=0.0003;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 227291770 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0022;AVGPOST=0.9979;RSQ=0.6126;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227291785 . TAA T 19 PASS INDEL;BAVGPOST=1.000;BRSQ=0.773;LDAF=0.0025;AVGPOST=0.9966;RSQ=0.4733;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227291817 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6418;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227291840 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2954;AVGPOST=0.9971;RSQ=0.9945;ERATE=0.0005;THETA=0.0003;AC=643;AN=2184 GT:DS:GL:BD 0.29441392 0
1 227291953 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1244;AVGPOST=0.9999;RSQ=0.9996;ERATE=0.0002;THETA=0.0003;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 227291992 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1343;AVGPOST=0.9989;RSQ=0.9970;ERATE=0.0003;THETA=0.0003;AC=292;AN=2184 GT:DS:GL:BD 0.13369964 0
1 227292026 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8148;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227292178 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1711;AVGPOST=0.9995;RSQ=0.9982;ERATE=0.0003;THETA=0.0005;AC=373;AN=2184 GT:DS:GL:BD 0.17078754 0
1 227292194 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6447;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227292218 . TA T 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5023;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227292258 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1302;AVGPOST=0.9987;RSQ=0.9952;ERATE=0.0005;THETA=0.0001;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 227292288 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2950;AVGPOST=0.9990;RSQ=0.9977;ERATE=0.0004;THETA=0.0003;AC=644;AN=2184 GT:DS:GL:BD 0.29487181 0
1 227292327 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.825;LDAF=0.0049;AVGPOST=0.9993;RSQ=0.9355;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227292369 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5491;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227292400 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1244;AVGPOST=0.9995;RSQ=0.9978;ERATE=0.0003;THETA=0.0003;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 227292412 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.767;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8656;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227292421 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5229;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227292485 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9338;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227292525 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.982;LDAF=0.2223;AVGPOST=0.9984;RSQ=0.9960;ERATE=0.0004;THETA=0.0004;AC=485;AN=2184 GT:DS:GL:BD 0.22206959 0
1 227292662 . G GA 134 PASS INDEL;BAVGPOST=0.987;BRSQ=0.564;LDAF=0.0299;AVGPOST=0.9626;RSQ=0.5226;ERATE=0.0069;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 227292865 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.777;LDAF=0.0042;AVGPOST=0.9961;RSQ=0.6575;ERATE=0.0005;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227292869 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.8977;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227292938 . A AT 490 PASS INDEL;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0023;AVGPOST=0.9992;RSQ=0.7924;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227293045 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.828;LDAF=0.0043;AVGPOST=0.9973;RSQ=0.7398;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227293210 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2942;AVGPOST=0.9984;RSQ=0.9966;ERATE=0.0005;THETA=0.0006;AC=643;AN=2184 GT:DS:GL:BD 0.29441392 0
1 227293340 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.773;LDAF=0.0017;AVGPOST=0.9988;RSQ=0.7075;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227293362 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227293451 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6636;AVGPOST=0.9994;RSQ=0.9987;ERATE=0.0004;THETA=0.0005;AC=1449;AN=2184 GT:DS:GL:BD 0.66346157 1
1 227293538 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9667;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227293604 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0109;AVGPOST=0.9995;RSQ=0.9842;ERATE=0.0003;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 227293620 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5592;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227293731 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0052;AVGPOST=0.9997;RSQ=0.9750;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227294024 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1702;AVGPOST=0.9995;RSQ=0.9982;ERATE=0.0003;THETA=0.0003;AC=371;AN=2184 GT:DS:GL:BD 0.16987179 0
1 227294121 . AC A 187 PASS INDEL;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9280;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227294125 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.854;LDAF=0.0038;AVGPOST=0.9981;RSQ=0.8120;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227294131 . TTAAG T 1557 PASS INDEL;BAVGPOST=0.996;BRSQ=0.844;LDAF=0.0095;AVGPOST=0.9969;RSQ=0.8790;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 227294135 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.5336;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227294194 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.556;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6288;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227294202 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0016;AVGPOST=0.9980;RSQ=0.4734;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227294382 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0198;AVGPOST=0.9995;RSQ=0.9896;ERATE=0.0002;THETA=0.0002;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 227294402 . G GT 453 PASS INDEL;BAVGPOST=0.999;BRSQ=0.821;LDAF=0.0027;AVGPOST=0.9982;RSQ=0.7521;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227294492 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7623;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227294519 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1377;AVGPOST=0.9998;RSQ=0.9993;ERATE=0.0003;THETA=0.0002;AC=300;AN=2184 GT:DS:GL:BD 0.13736264 0
1 227294526 . T TC 22 PASS INDEL;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0019;AVGPOST=0.9977;RSQ=0.5160;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227294568 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8498;AVGPOST=0.9983;RSQ=0.9938;ERATE=0.0005;THETA=0.0005;AC=1857;AN=2184 GT:DS:GL:BD 0.85027474 1
1 227294785 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0061;AVGPOST=0.9979;RSQ=0.8610;ERATE=0.0006;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227294907 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.806;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.8956;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227294992 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7408;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227295024 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6213;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227295038 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1246;AVGPOST=0.9991;RSQ=0.9972;ERATE=0.0004;THETA=0.0002;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 227295064 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0325;AVGPOST=0.9999;RSQ=0.9980;ERATE=0.0002;THETA=0.0003;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 227295148 . G GTC 5507 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0327;AVGPOST=0.9995;RSQ=0.9923;ERATE=0.0003;THETA=0.0004;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 227295213 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1302;AVGPOST=0.9986;RSQ=0.9947;ERATE=0.0003;THETA=0.0003;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 227295289 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.5741;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227295329 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7089;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227295377 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0078;AVGPOST=0.9996;RSQ=0.9766;ERATE=0.0002;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227295529 . CCTT C 528 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0058;AVGPOST=0.9994;RSQ=0.9584;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227295539 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227295572 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2941;AVGPOST=0.9989;RSQ=0.9977;ERATE=0.0004;THETA=0.0004;AC=643;AN=2184 GT:DS:GL:BD 0.29441392 0
1 227295619 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227295712 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5019;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227295716 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.8498;AVGPOST=0.9990;RSQ=0.9964;ERATE=0.0004;THETA=0.0002;AC=1857;AN=2184 GT:DS:GL:BD 0.85027474 1
1 227295740 . CAACT C 6042 PASS INDEL;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0328;AVGPOST=0.9993;RSQ=0.9901;ERATE=0.0004;THETA=0.0003;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 227295899 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9763;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227296009 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.1655;AVGPOST=0.9982;RSQ=0.9950;ERATE=0.0003;THETA=0.0003;AC=361;AN=2184 GT:DS:GL:BD 0.16529304 0
1 227296082 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.8503;AVGPOST=0.9994;RSQ=0.9978;ERATE=0.0003;THETA=0.0004;AC=1857;AN=2184 GT:DS:GL:BD 0.85027474 1
1 227296125 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.971;LDAF=0.0644;AVGPOST=0.9992;RSQ=0.9936;ERATE=0.0003;THETA=0.0014;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 227296133 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8966;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227296153 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0103;AVGPOST=0.9983;RSQ=0.9340;ERATE=0.0002;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 227296300 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2944;AVGPOST=0.9995;RSQ=0.9989;ERATE=0.0003;THETA=0.0003;AC=643;AN=2184 GT:DS:GL:BD 0.29441392 0
1 227296302 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7041;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227296354 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6405;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227296369 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0648;AVGPOST=0.9995;RSQ=0.9964;ERATE=0.0003;THETA=0.0002;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 227296447 . C CT 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7462;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227296525 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7052;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227296531 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0036;AVGPOST=0.9999;RSQ=0.9826;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227296585 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.6474;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227296587 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.975;LDAF=0.8424;AVGPOST=0.9924;RSQ=0.9773;ERATE=0.0009;THETA=0.0004;AC=1843;AN=2184 GT:DS:GL:BD 0.84386444 1
1 227296624 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1242;AVGPOST=0.9997;RSQ=0.9989;ERATE=0.0002;THETA=0.0001;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 227296626 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0596;AVGPOST=0.9990;RSQ=0.9937;ERATE=0.0004;THETA=0.0003;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 227296715 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7941;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227296744 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9225;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227296751 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6850;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227296809 . TG T 272 PASS INDEL;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8420;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227296929 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0027;AVGPOST=0.9994;RSQ=0.8969;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227296934 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9144;ERATE=0.0002;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227297075 rs34507557 C CT 10202 PASS INDEL;BAVGPOST=0.995;BRSQ=0.981;LDAF=0.1804;AVGPOST=0.9777;RSQ=0.9449;ERATE=0.0043;THETA=0.0003;AC=383;AN=2184 GT:DS:GL:BD 0.17536630 0
1 227297112 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1345;AVGPOST=0.9948;RSQ=0.9833;ERATE=0.0007;THETA=0.0004;AC=294;AN=2184 GT:DS:GL:BD 0.13461539 0
1 227297138 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0129;AVGPOST=0.9994;RSQ=0.9770;ERATE=0.0002;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 227297164 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1712;AVGPOST=0.9963;RSQ=0.9902;ERATE=0.0005;THETA=0.0008;AC=371;AN=2184 GT:DS:GL:BD 0.16987179 0
1 227297173 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0208;AVGPOST=0.9995;RSQ=0.9898;ERATE=0.0003;THETA=0.0004;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 227297214 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0047;AVGPOST=0.9988;RSQ=0.9027;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227297239 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9988;RSQ=0.8855;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227297257 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7767;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227297258 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.756;LDAF=0.0020;AVGPOST=0.9986;RSQ=0.6805;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227297363 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7576;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227297382 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6787;ERATE=0.0003;THETA=0.0027;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227297415 rs60530309 TTTTA T 14890 PASS INDEL;BAVGPOST=0.992;BRSQ=0.964;LDAF=0.1215;AVGPOST=0.9935;RSQ=0.9790;ERATE=0.0013;THETA=0.0003;AC=267;AN=2184 GT:DS:GL:BD 0.12225275 0
1 227297511 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5420;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227297523 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0329;AVGPOST=0.9984;RSQ=0.9828;ERATE=0.0003;THETA=0.0002;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 227297542 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2946;AVGPOST=0.9957;RSQ=0.9920;ERATE=0.0014;THETA=0.0005;AC=644;AN=2184 GT:DS:GL:BD 0.29487181 0
1 227297555 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.2172;AVGPOST=0.9973;RSQ=0.9942;ERATE=0.0004;THETA=0.0003;AC=473;AN=2184 GT:DS:GL:BD 0.21657509 0
1 227297583 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0042;AVGPOST=0.9992;RSQ=0.9156;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227297628 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1340;AVGPOST=0.9993;RSQ=0.9975;ERATE=0.0003;THETA=0.0004;AC=292;AN=2184 GT:DS:GL:BD 0.13369964 0
1 227297688 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1345;AVGPOST=0.9985;RSQ=0.9957;ERATE=0.0004;THETA=0.0003;AC=292;AN=2184 GT:DS:GL:BD 0.13369964 0
1 227297701 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.806;LDAF=0.0020;AVGPOST=0.9994;RSQ=0.8619;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227297779 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0081;AVGPOST=0.9994;RSQ=0.9690;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227297794 . G GT 102 PASS INDEL;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5809;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227297923 . TTC T 263 PASS INDEL;BAVGPOST=0.995;BRSQ=0.916;LDAF=0.0308;AVGPOST=0.9970;RSQ=0.9639;ERATE=0.0003;THETA=0.0010;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 227297927 . CTCTT C 5104 PASS INDEL;BAVGPOST=0.995;BRSQ=0.919;LDAF=0.0308;AVGPOST=0.9972;RSQ=0.9660;ERATE=0.0003;THETA=0.0005;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 227298128 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5357;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227298165 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1305;AVGPOST=0.9981;RSQ=0.9938;ERATE=0.0004;THETA=0.0004;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 227298469 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4759;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227298513 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0109;AVGPOST=0.9995;RSQ=0.9848;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 227298554 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2945;AVGPOST=0.9989;RSQ=0.9976;ERATE=0.0004;THETA=0.0003;AC=643;AN=2184 GT:DS:GL:BD 0.29441392 0
1 227298584 . CT C 203 PASS INDEL;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0018;AVGPOST=0.9986;RSQ=0.7041;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227298594 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0108;AVGPOST=0.9996;RSQ=0.9904;ERATE=0.0002;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 227298607 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1243;AVGPOST=0.9993;RSQ=0.9971;ERATE=0.0003;THETA=0.0004;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 227298682 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5691;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227298908 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6952;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227298955 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0108;AVGPOST=0.9995;RSQ=0.9867;ERATE=0.0002;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 227298998 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.8500;AVGPOST=0.9995;RSQ=0.9980;ERATE=0.0003;THETA=0.0002;AC=1857;AN=2184 GT:DS:GL:BD 0.85027474 1
1 227299072 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1301;AVGPOST=0.9992;RSQ=0.9975;ERATE=0.0003;THETA=0.0007;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 227299145 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.864;LDAF=0.0028;AVGPOST=0.9995;RSQ=0.9132;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227299345 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.668;LDAF=0.0278;AVGPOST=0.9710;RSQ=0.6076;ERATE=0.0098;THETA=0.0002;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 227299353 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0074;AVGPOST=0.9987;RSQ=0.9350;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227299529 . G GT 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6466;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227299597 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.967;LDAF=0.0199;AVGPOST=0.9988;RSQ=0.9767;ERATE=0.0002;THETA=0.0002;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 227299766 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227299817 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8121;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227299846 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227299978 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2943;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=643;AN=2184 GT:DS:GL:BD 0.29441392 0
1 227299995 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227300030 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8689;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227300234 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227300277 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.6567;AVGPOST=0.9979;RSQ=0.9966;ERATE=0.0006;THETA=0.0005;AC=1435;AN=2184 GT:DS:GL:BD 0.65705127 1
1 227300353 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227300635 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227300771 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0126;AVGPOST=0.9996;RSQ=0.9911;ERATE=0.0003;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 227301000 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0602;AVGPOST=0.9984;RSQ=0.9913;ERATE=0.0003;THETA=0.0002;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 227301019 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7086;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227301044 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.873;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8735;ERATE=0.0004;THETA=0.0001;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227301049 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5155;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227301111 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7596;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227301177 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.850;LDAF=0.0029;AVGPOST=0.9990;RSQ=0.8982;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227301192 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227301491 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5201;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227301606 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7393;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227301610 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0363;AVGPOST=0.9997;RSQ=0.9957;ERATE=0.0003;THETA=0.0003;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 227301791 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8255;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227301807 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.837;LDAF=0.0086;AVGPOST=0.9985;RSQ=0.9201;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 227301820 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9302;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227301888 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0083;AVGPOST=0.9985;RSQ=0.9166;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227301914 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1252;AVGPOST=0.9986;RSQ=0.9945;ERATE=0.0005;THETA=0.0002;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 227301934 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8878;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227301944 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9767;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227301945 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.722;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8116;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227301999 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0404;AVGPOST=0.9995;RSQ=0.9945;ERATE=0.0004;THETA=0.0004;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 227302119 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.781;LDAF=0.0084;AVGPOST=0.9965;RSQ=0.8284;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227302250 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.4453;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227302326 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7283;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227302494 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0040;AVGPOST=0.9981;RSQ=0.8247;ERATE=0.0004;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227302701 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9550;ERATE=0.0002;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227302833 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1728;AVGPOST=0.9988;RSQ=0.9965;ERATE=0.0003;THETA=0.0003;AC=376;AN=2184 GT:DS:GL:BD 0.17216118 0
1 227302912 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1340;AVGPOST=0.9994;RSQ=0.9976;ERATE=0.0003;THETA=0.0003;AC=292;AN=2184 GT:DS:GL:BD 0.13369964 0
1 227302921 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0328;AVGPOST=0.9993;RSQ=0.9908;ERATE=0.0002;THETA=0.0003;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 227303004 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0365;AVGPOST=0.9992;RSQ=0.9895;ERATE=0.0003;THETA=0.0004;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 227303028 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0155;AVGPOST=0.9997;RSQ=0.9932;ERATE=0.0002;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 227303097 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.824;LDAF=0.0051;AVGPOST=0.9987;RSQ=0.8853;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227303185 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0029;AVGPOST=0.9973;RSQ=0.6480;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227303246 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227303286 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4558;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227303299 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.7081;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227303584 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0035;AVGPOST=0.9949;RSQ=0.3795;ERATE=0.0014;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227303587 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.908;LDAF=0.0264;AVGPOST=0.9966;RSQ=0.9500;ERATE=0.0004;THETA=0.0003;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 227303589 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.902;LDAF=0.0250;AVGPOST=0.9974;RSQ=0.9584;ERATE=0.0003;THETA=0.0005;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 227303666 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7529;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227303850 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6746;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227303865 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0018;AVGPOST=0.9974;RSQ=0.5119;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227304062 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2954;AVGPOST=0.9974;RSQ=0.9945;ERATE=0.0007;THETA=0.0003;AC=645;AN=2184 GT:DS:GL:BD 0.29532966 0
1 227304180 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.6564;AVGPOST=0.9968;RSQ=0.9944;ERATE=0.0007;THETA=0.0011;AC=1435;AN=2184 GT:DS:GL:BD 0.65705127 1
1 227304194 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.5952;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227304291 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2282;AVGPOST=0.9972;RSQ=0.9933;ERATE=0.0005;THETA=0.0005;AC=496;AN=2184 GT:DS:GL:BD 0.22710623 0
1 227304309 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5678;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227304351 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0036;AVGPOST=0.9989;RSQ=0.8780;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227304540 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1299;AVGPOST=0.9995;RSQ=0.9981;ERATE=0.0003;THETA=0.0002;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 227304598 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8864;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227304838 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1339;AVGPOST=0.9996;RSQ=0.9986;ERATE=0.0003;THETA=0.0002;AC=292;AN=2184 GT:DS:GL:BD 0.13369964 0
1 227304863 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1244;AVGPOST=0.9997;RSQ=0.9989;ERATE=0.0002;THETA=0.0004;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 227304901 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8374;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227304971 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2947;AVGPOST=0.9985;RSQ=0.9969;ERATE=0.0005;THETA=0.0003;AC=643;AN=2184 GT:DS:GL:BD 0.29441392 0
1 227305001 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1298;AVGPOST=0.9996;RSQ=0.9984;ERATE=0.0003;THETA=0.0003;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 227305083 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.780;LDAF=0.0039;AVGPOST=0.9979;RSQ=0.7934;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227305218 . GT G 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6586;ERATE=0.0003;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227305286 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.871;LDAF=0.0146;AVGPOST=0.9979;RSQ=0.9426;ERATE=0.0003;THETA=0.0025;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 227305583 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9099;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227305786 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8169;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227305901 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1340;AVGPOST=0.9997;RSQ=0.9989;ERATE=0.0003;THETA=0.0001;AC=292;AN=2184 GT:DS:GL:BD 0.13369964 0
1 227305968 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1244;AVGPOST=0.9995;RSQ=0.9974;ERATE=0.0003;THETA=0.0004;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 227306048 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8499;AVGPOST=0.9991;RSQ=0.9968;ERATE=0.0004;THETA=0.0004;AC=1857;AN=2184 GT:DS:GL:BD 0.85027474 1
1 227306077 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.737;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8115;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227306247 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0036;AVGPOST=0.9997;RSQ=0.9617;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227306290 . AT A 1740 PASS INDEL;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0209;AVGPOST=0.9972;RSQ=0.9525;ERATE=0.0005;THETA=0.0002;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 227306355 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1588;AVGPOST=0.9983;RSQ=0.9944;ERATE=0.0005;THETA=0.0003;AC=346;AN=2184 GT:DS:GL:BD 0.15842491 0
1 227306488 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.954;LDAF=0.7974;AVGPOST=0.9821;RSQ=0.9574;ERATE=0.0016;THETA=0.0003;AC=1749;AN=2184 GT:DS:GL:BD 0.80082417 1
1 227306523 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0115;AVGPOST=0.9990;RSQ=0.9761;ERATE=0.0003;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 227306556 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0327;AVGPOST=0.9995;RSQ=0.9931;ERATE=0.0003;THETA=0.0003;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 227306576 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6627;AVGPOST=0.9980;RSQ=0.9965;ERATE=0.0005;THETA=0.0005;AC=1447;AN=2184 GT:DS:GL:BD 0.66254580 1
1 227306582 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0058;AVGPOST=0.9981;RSQ=0.8966;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227306831 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0650;AVGPOST=0.9992;RSQ=0.9940;ERATE=0.0003;THETA=0.0003;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 227306920 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0392;AVGPOST=0.9994;RSQ=0.9936;ERATE=0.0004;THETA=0.0004;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 227307008 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.610;LDAF=0.0050;AVGPOST=0.9938;RSQ=0.5021;ERATE=0.0005;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227307102 rs35588882 CA C 11244 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1341;AVGPOST=0.9989;RSQ=0.9959;ERATE=0.0004;THETA=0.0002;AC=292;AN=2184 GT:DS:GL:BD 0.13369964 0
1 227307366 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7737;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227307455 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1195;AVGPOST=0.9996;RSQ=0.9984;ERATE=0.0002;THETA=0.0003;AC=261;AN=2184 GT:DS:GL:BD 0.11950549 0
1 227307558 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227307579 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0002;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 227307652 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0046;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227307692 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0106;AVGPOST=0.9998;RSQ=0.9924;ERATE=0.0002;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 227307789 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0184;AVGPOST=0.9998;RSQ=0.9943;ERATE=0.0003;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 227307816 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0060;AVGPOST=0.9998;RSQ=0.9820;ERATE=0.0002;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227307861 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0362;AVGPOST=0.9999;RSQ=0.9988;ERATE=0.0002;THETA=0.0006;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 227308022 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227308031 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0112;AVGPOST=0.9996;RSQ=0.9838;ERATE=0.0003;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 227308037 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0055;AVGPOST=0.9998;RSQ=0.9863;ERATE=0.0002;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227308108 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0018;AVGPOST=0.9995;RSQ=0.8812;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227308138 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7841;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227308278 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8233;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227308286 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.744;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.6148;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227308339 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1717;AVGPOST=0.9987;RSQ=0.9968;ERATE=0.0003;THETA=0.0005;AC=375;AN=2184 GT:DS:GL:BD 0.17170329 0
1 227308416 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0364;AVGPOST=0.9995;RSQ=0.9937;ERATE=0.0003;THETA=0.0003;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 227308472 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8945;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227308579 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1702;AVGPOST=0.9993;RSQ=0.9976;ERATE=0.0003;THETA=0.0001;AC=371;AN=2184 GT:DS:GL:BD 0.16987179 0
1 227308640 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.905;LDAF=0.0170;AVGPOST=0.9981;RSQ=0.9602;ERATE=0.0003;THETA=0.0002;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 227308787 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5123;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227308814 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1298;AVGPOST=0.9995;RSQ=0.9978;ERATE=0.0003;THETA=0.0001;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 227308831 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0024;AVGPOST=0.9975;RSQ=0.5829;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227308845 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8501;AVGPOST=0.9992;RSQ=0.9972;ERATE=0.0003;THETA=0.0008;AC=1857;AN=2184 GT:DS:GL:BD 0.85027474 1
1 227308909 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.6600;AVGPOST=0.9969;RSQ=0.9956;ERATE=0.0003;THETA=0.0003;AC=1442;AN=2184 GT:DS:GL:BD 0.66025639 1
1 227308963 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.2175;AVGPOST=0.9995;RSQ=0.9988;ERATE=0.0003;THETA=0.0003;AC=474;AN=2184 GT:DS:GL:BD 0.21703297 0
1 227309054 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0157;AVGPOST=0.9976;RSQ=0.9513;ERATE=0.0003;THETA=0.0006;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 227309122 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8864;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227309164 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0039;AVGPOST=0.9989;RSQ=0.8957;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227309175 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.798;LDAF=0.0034;AVGPOST=0.9987;RSQ=0.8436;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227309190 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.832;LDAF=0.0176;AVGPOST=0.9947;RSQ=0.8831;ERATE=0.0002;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 227309525 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.1330;AVGPOST=0.9964;RSQ=0.9881;ERATE=0.0005;THETA=0.0002;AC=289;AN=2184 GT:DS:GL:BD 0.13232601 0
1 227309547 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0131;AVGPOST=0.9984;RSQ=0.9442;ERATE=0.0004;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 227309556 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1699;AVGPOST=0.9989;RSQ=0.9966;ERATE=0.0003;THETA=0.0013;AC=371;AN=2184 GT:DS:GL:BD 0.16987179 0
1 227309630 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0121;AVGPOST=0.9966;RSQ=0.9044;ERATE=0.0003;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 227309744 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.970;LDAF=0.0423;AVGPOST=0.9943;RSQ=0.9514;ERATE=0.0009;THETA=0.0004;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 227309778 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.956;LDAF=0.8274;AVGPOST=0.9633;RSQ=0.9031;ERATE=0.0058;THETA=0.0002;AC=1829;AN=2184 GT:DS:GL:BD 0.83745420 1
1 227309788 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.969;LDAF=0.1640;AVGPOST=0.9954;RSQ=0.9861;ERATE=0.0006;THETA=0.0003;AC=361;AN=2184 GT:DS:GL:BD 0.16529304 0
1 227309803 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.596;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227309961 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.2942;AVGPOST=0.9991;RSQ=0.9981;ERATE=0.0003;THETA=0.0001;AC=643;AN=2184 GT:DS:GL:BD 0.29441392 0
1 227310000 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7604;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227310031 . TG T 34 PASS INDEL;BAVGPOST=1.000;BRSQ=0.776;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4995;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227310126 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2940;AVGPOST=0.9969;RSQ=0.9948;ERATE=0.0003;THETA=0.0027;AC=641;AN=2184 GT:DS:GL:BD 0.29349816 0
1 227310144 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0392;AVGPOST=0.9989;RSQ=0.9896;ERATE=0.0003;THETA=0.0003;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 227310192 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0052;AVGPOST=0.9997;RSQ=0.9704;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227310197 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1309;AVGPOST=0.9984;RSQ=0.9945;ERATE=0.0003;THETA=0.0007;AC=285;AN=2184 GT:DS:GL:BD 0.13049451 0
1 227310207 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2945;AVGPOST=0.9982;RSQ=0.9964;ERATE=0.0005;THETA=0.0003;AC=643;AN=2184 GT:DS:GL:BD 0.29441392 0
1 227310298 . C CT 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4622;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227310307 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.2946;AVGPOST=0.9984;RSQ=0.9967;ERATE=0.0004;THETA=0.0005;AC=643;AN=2184 GT:DS:GL:BD 0.29441392 0
1 227310364 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6343;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227310427 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0109;AVGPOST=0.9991;RSQ=0.9724;ERATE=0.0003;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 227310576 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1700;AVGPOST=0.9980;RSQ=0.9942;ERATE=0.0005;THETA=0.0002;AC=371;AN=2184 GT:DS:GL:BD 0.16987179 0
1 227310581 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6263;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227310644 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2945;AVGPOST=0.9993;RSQ=0.9983;ERATE=0.0004;THETA=0.0002;AC=643;AN=2184 GT:DS:GL:BD 0.29441392 0
1 227310785 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0015;AVGPOST=0.9985;RSQ=0.6505;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227311066 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2945;AVGPOST=0.9986;RSQ=0.9970;ERATE=0.0004;THETA=0.0003;AC=643;AN=2184 GT:DS:GL:BD 0.29441392 0
1 227311175 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9149;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227311310 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.971;LDAF=0.0646;AVGPOST=0.9970;RSQ=0.9833;ERATE=0.0003;THETA=0.0004;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 227311405 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5938;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227311492 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9305;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227311508 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227311543 . GGA G 622 PASS INDEL;BAVGPOST=0.964;BRSQ=0.635;LDAF=0.0862;AVGPOST=0.9093;RSQ=0.5180;ERATE=0.0343;THETA=0.0003;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 227311617 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.890;LDAF=0.0088;AVGPOST=0.9977;RSQ=0.8858;ERATE=0.0004;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227311690 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2930;AVGPOST=0.9973;RSQ=0.9942;ERATE=0.0007;THETA=0.0003;AC=640;AN=2184 GT:DS:GL:BD 0.29304031 0
1 227311728 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.941;LDAF=0.0379;AVGPOST=0.9963;RSQ=0.9662;ERATE=0.0005;THETA=0.0004;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 227311738 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1691;AVGPOST=0.9977;RSQ=0.9942;ERATE=0.0003;THETA=0.0002;AC=367;AN=2184 GT:DS:GL:BD 0.16804029 0
1 227311760 . A AG 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0029;AVGPOST=0.9950;RSQ=0.3204;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227311821 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.637;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5957;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227312012 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2939;AVGPOST=0.9928;RSQ=0.9859;ERATE=0.0015;THETA=0.0002;AC=643;AN=2184 GT:DS:GL:BD 0.29441392 0
1 227312027 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0025;AVGPOST=0.9994;RSQ=0.8790;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227312120 . AT A 1016 PASS INDEL;BAVGPOST=0.997;BRSQ=0.806;LDAF=0.0106;AVGPOST=0.9963;RSQ=0.8566;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 227312132 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1595;AVGPOST=0.9973;RSQ=0.9914;ERATE=0.0004;THETA=0.0003;AC=348;AN=2184 GT:DS:GL:BD 0.15934066 0
1 227312237 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0022;AVGPOST=0.9986;RSQ=0.7343;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227312289 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.801;LDAF=0.0052;AVGPOST=0.9971;RSQ=0.7999;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227312442 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0100;AVGPOST=0.9989;RSQ=0.9515;ERATE=0.0004;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 227312510 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7244;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227312564 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1259;AVGPOST=0.9981;RSQ=0.9931;ERATE=0.0005;THETA=0.0002;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 227312573 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.985;LDAF=0.2267;AVGPOST=0.9955;RSQ=0.9902;ERATE=0.0006;THETA=0.0002;AC=495;AN=2184 GT:DS:GL:BD 0.22664835 0
1 227312609 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1317;AVGPOST=0.9963;RSQ=0.9893;ERATE=0.0006;THETA=0.0003;AC=286;AN=2184 GT:DS:GL:BD 0.13095239 0
1 227312645 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2182;AVGPOST=0.9976;RSQ=0.9940;ERATE=0.0005;THETA=0.0004;AC=476;AN=2184 GT:DS:GL:BD 0.21794872 0
1 227312668 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227312687 . TAAAC T 248 PASS INDEL;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5365;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227312699 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4815;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227312821 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0645;AVGPOST=0.9992;RSQ=0.9950;ERATE=0.0002;THETA=0.0003;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 227312868 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2942;AVGPOST=0.9986;RSQ=0.9967;ERATE=0.0005;THETA=0.0002;AC=643;AN=2184 GT:DS:GL:BD 0.29441392 0
1 227313054 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.837;LDAF=0.0029;AVGPOST=0.9983;RSQ=0.7988;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227313158 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0089;AVGPOST=0.9992;RSQ=0.9572;ERATE=0.0003;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 227313262 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0087;AVGPOST=0.9981;RSQ=0.9060;ERATE=0.0005;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227313297 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.927;BRSQ=0.792;LDAF=0.7628;AVGPOST=0.8750;RSQ=0.7409;ERATE=0.0312;THETA=0.0005;AC=1708;AN=2184 GT:DS:GL:BD 0.78205127 1
1 227313362 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1245;AVGPOST=0.9990;RSQ=0.9960;ERATE=0.0005;THETA=0.0016;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 227313629 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227313649 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.868;LDAF=0.0049;AVGPOST=0.9989;RSQ=0.8936;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227313842 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0072;AVGPOST=0.9997;RSQ=0.9819;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 227313894 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0642;AVGPOST=0.9992;RSQ=0.9953;ERATE=0.0003;THETA=0.0005;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 227313934 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0213;AVGPOST=0.9992;RSQ=0.9832;ERATE=0.0002;THETA=0.0003;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 227313996 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6744;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227314043 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6889;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227314075 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.837;LDAF=0.0038;AVGPOST=0.9974;RSQ=0.7451;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227314109 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.755;LDAF=0.0028;AVGPOST=0.9976;RSQ=0.6513;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227314181 . G GA 690 PASS INDEL;BAVGPOST=0.992;BRSQ=0.836;LDAF=0.0292;AVGPOST=0.9945;RSQ=0.9226;ERATE=0.0007;THETA=0.0003;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 227314201 . G GT 2022 PASS INDEL;BAVGPOST=0.958;BRSQ=0.622;LDAF=0.0951;AVGPOST=0.9172;RSQ=0.6223;ERATE=0.0140;THETA=0.0003;AC=162;AN=2184 GT:DS:GL:BD 0.07417583 0
1 227314241 . A AG 714 PASS INDEL;BAVGPOST=0.948;BRSQ=0.565;LDAF=0.0769;AVGPOST=0.9293;RSQ=0.6335;ERATE=0.0125;THETA=0.0004;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 227314286 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227314314 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0036;AVGPOST=0.9993;RSQ=0.9038;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227314389 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0090;AVGPOST=0.9991;RSQ=0.9568;ERATE=0.0003;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 227314550 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.809;LDAF=0.0033;AVGPOST=0.9978;RSQ=0.7414;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227314605 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8483;ERATE=0.0002;THETA=0.0027;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227314609 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0064;AVGPOST=0.9991;RSQ=0.9332;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227314624 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.804;LDAF=0.0039;AVGPOST=0.9988;RSQ=0.8488;ERATE=0.0003;THETA=0.0001;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227314857 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7429;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227315118 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7186;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227315307 . GT G 221 PASS INDEL;BAVGPOST=0.998;BRSQ=0.767;LDAF=0.0064;AVGPOST=0.9951;RSQ=0.6931;ERATE=0.0007;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227315314 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.6145;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227315379 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.926;LDAF=0.0631;AVGPOST=0.9948;RSQ=0.9678;ERATE=0.0003;THETA=0.0004;AC=136;AN=2184 GT:DS:GL:BD 0.06227106 0
1 227315408 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1245;AVGPOST=0.9989;RSQ=0.9957;ERATE=0.0004;THETA=0.0004;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 227315477 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6437;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227315498 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0062;AVGPOST=0.9995;RSQ=0.9695;ERATE=0.0002;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 227315559 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0036;AVGPOST=0.9996;RSQ=0.9522;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227315607 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7090;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227315660 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0037;AVGPOST=0.9996;RSQ=0.9576;ERATE=0.0002;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227315668 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0106;AVGPOST=0.9999;RSQ=0.9961;ERATE=0.0002;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 227315693 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5421;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227315702 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0106;AVGPOST=0.9998;RSQ=0.9923;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 227315870 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9469;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227315938 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2934;AVGPOST=0.9990;RSQ=0.9979;ERATE=0.0004;THETA=0.0003;AC=641;AN=2184 GT:DS:GL:BD 0.29349816 0
1 227315967 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0040;AVGPOST=0.9992;RSQ=0.9114;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227316021 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.871;LDAF=0.0137;AVGPOST=0.9945;RSQ=0.8564;ERATE=0.0002;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 227316032 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2938;AVGPOST=0.9983;RSQ=0.9967;ERATE=0.0004;THETA=0.0004;AC=641;AN=2184 GT:DS:GL:BD 0.29349816 0
1 227316311 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227316372 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0388;AVGPOST=0.9997;RSQ=0.9967;ERATE=0.0002;THETA=0.0006;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 227316582 . AT A 286 PASS INDEL;BAVGPOST=0.999;BRSQ=0.819;LDAF=0.0043;AVGPOST=0.9972;RSQ=0.7702;ERATE=0.0006;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227316816 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227317033 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9229;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227317402 . G GCATA 1971 PASS INDEL;BAVGPOST=0.927;BRSQ=0.555;LDAF=0.1116;AVGPOST=0.9111;RSQ=0.6687;ERATE=0.0088;THETA=0.0032;AC=217;AN=2184 GT:DS:GL:BD 0.09935898 0
1 227317464 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6027;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227317593 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2941;AVGPOST=0.9977;RSQ=0.9948;ERATE=0.0005;THETA=0.0004;AC=643;AN=2184 GT:DS:GL:BD 0.29441392 0
1 227317722 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7305;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227317747 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.6566;AVGPOST=0.9968;RSQ=0.9935;ERATE=0.0005;THETA=0.0004;AC=1434;AN=2184 GT:DS:GL:BD 0.65659338 1
1 227317791 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0049;AVGPOST=0.9991;RSQ=0.9413;ERATE=0.0002;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227317900 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227317921 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0037;AVGPOST=0.9995;RSQ=0.9345;ERATE=0.0002;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227317988 . CGT C 212 PASS INDEL;BAVGPOST=0.986;BRSQ=0.653;LDAF=0.0352;AVGPOST=0.9632;RSQ=0.5551;ERATE=0.0117;THETA=0.0006;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 227318016 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0048;AVGPOST=0.9978;RSQ=0.8466;ERATE=0.0002;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227318028 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.967;LDAF=0.0997;AVGPOST=0.9970;RSQ=0.9849;ERATE=0.0004;THETA=0.0003;AC=217;AN=2184 GT:DS:GL:BD 0.09935898 0
1 227318078 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7367;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227318087 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.895;LDAF=0.0144;AVGPOST=0.9968;RSQ=0.9120;ERATE=0.0003;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 227318138 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227318172 . GTATT G 4336 PASS INDEL;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0364;AVGPOST=0.9991;RSQ=0.9890;ERATE=0.0003;THETA=0.0006;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 227318213 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6894;ERATE=0.0004;THETA=0.0056;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227318283 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0008;AVGPOST=0.9987;RSQ=0.3567;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227318308 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.753;LDAF=0.0068;AVGPOST=0.9967;RSQ=0.8004;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227318394 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.591;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5001;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227318414 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0052;AVGPOST=0.9992;RSQ=0.9315;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227318433 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0039;AVGPOST=0.9989;RSQ=0.8824;ERATE=0.0003;THETA=0.0036;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227318449 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.799;LDAF=0.0093;AVGPOST=0.9925;RSQ=0.6844;ERATE=0.0012;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 227318464 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.2169;AVGPOST=0.9940;RSQ=0.9853;ERATE=0.0004;THETA=0.0002;AC=471;AN=2184 GT:DS:GL:BD 0.21565934 0
1 227318498 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1340;AVGPOST=0.9984;RSQ=0.9941;ERATE=0.0003;THETA=0.0015;AC=292;AN=2184 GT:DS:GL:BD 0.13369964 0
1 227318518 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0040;AVGPOST=0.9982;RSQ=0.8044;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227318560 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1341;AVGPOST=0.9971;RSQ=0.9909;ERATE=0.0004;THETA=0.0004;AC=294;AN=2184 GT:DS:GL:BD 0.13461539 0
1 227318624 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5424;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227318627 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0032;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227318676 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0326;AVGPOST=0.9995;RSQ=0.9937;ERATE=0.0003;THETA=0.0005;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 227318847 rs35612828 C CA 15842 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1711;AVGPOST=0.9977;RSQ=0.9932;ERATE=0.0005;THETA=0.0016;AC=373;AN=2184 GT:DS:GL:BD 0.17078754 0
1 227318852 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0002;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227318899 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.5688;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227318924 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0326;AVGPOST=0.9998;RSQ=0.9971;ERATE=0.0002;THETA=0.0007;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 227319053 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.930;LDAF=0.0108;AVGPOST=0.9995;RSQ=0.9836;ERATE=0.0002;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 227319072 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0329;AVGPOST=0.9991;RSQ=0.9903;ERATE=0.0002;THETA=0.0005;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 227319334 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.7278;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227319394 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.706;LDAF=0.0018;AVGPOST=0.9995;RSQ=0.8971;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227319426 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0031;AVGPOST=0.9984;RSQ=0.7914;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227319544 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0039;AVGPOST=0.9994;RSQ=0.9414;ERATE=0.0006;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227319688 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9385;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227319734 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7417;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227319751 rs111489876 ACT A 19775 PASS INDEL;BAVGPOST=0.991;BRSQ=0.980;LDAF=0.2916;AVGPOST=0.9964;RSQ=0.9923;ERATE=0.0003;THETA=0.0003;AC=637;AN=2184 GT:DS:GL:BD 0.29166666 0
1 227319816 rs71888772 ACCCTCT A 13863 PASS INDEL;BAVGPOST=0.907;BRSQ=0.784;LDAF=0.2736;AVGPOST=0.9230;RSQ=0.8583;ERATE=0.0086;THETA=0.0041;AC=591;AN=2184 GT:DS:GL:BD 0.27060440 0
1 227319837 rs34592270 CT C 267 PASS INDEL;BAVGPOST=0.912;BRSQ=0.440;LDAF=0.1081;AVGPOST=0.9059;RSQ=0.6251;ERATE=0.0104;THETA=0.0003;AC=203;AN=2184 GT:DS:GL:BD 0.09294872 0
1 227319892 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.903;LDAF=0.0182;AVGPOST=0.9872;RSQ=0.7104;ERATE=0.0017;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 227319903 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.677;BRSQ=0.526;LDAF=0.3870;AVGPOST=0.7895;RSQ=0.7014;ERATE=0.0186;THETA=0.0044;AC=834;AN=2184 GT:DS:GL:BD 0.38186812 0
1 227319904 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.704;BRSQ=0.558;LDAF=0.6108;AVGPOST=0.7973;RSQ=0.7111;ERATE=0.0138;THETA=0.0025;AC=1397;AN=2184 GT:DS:GL:BD 0.63965201 1
1 227319913 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.813;BRSQ=0.618;LDAF=0.6614;AVGPOST=0.7371;RSQ=0.5664;ERATE=0.0386;THETA=0.0003;AC=1575;AN=2184 GT:DS:GL:BD 0.72115386 1
1 227319980 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.1718;AVGPOST=0.9970;RSQ=0.9914;ERATE=0.0004;THETA=0.0004;AC=373;AN=2184 GT:DS:GL:BD 0.17078754 0
1 227320180 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.898;BRSQ=0.257;LDAF=0.0980;AVGPOST=0.8761;RSQ=0.4724;ERATE=0.0099;THETA=0.0004;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 227320577 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.932;BRSQ=0.835;LDAF=0.2917;AVGPOST=0.9230;RSQ=0.8555;ERATE=0.0048;THETA=0.0007;AC=624;AN=2184 GT:DS:GL:BD 0.28571430 0
1 227320645 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.773;BRSQ=0.480;LDAF=0.6965;AVGPOST=0.7484;RSQ=0.5146;ERATE=0.0178;THETA=0.0003;AC=1632;AN=2184 GT:DS:GL:BD 0.74725276 1
1 227320674 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.847;LDAF=0.1359;AVGPOST=0.9679;RSQ=0.8946;ERATE=0.0019;THETA=0.0002;AC=282;AN=2184 GT:DS:GL:BD 0.12912089 0
1 227320797 rs71179194 G GC 2025 PASS INDEL;BAVGPOST=0.596;BRSQ=0.280;LDAF=0.5904;AVGPOST=0.7093;RSQ=0.4989;ERATE=0.0203;THETA=0.0002;AC=1383;AN=2184 GT:DS:GL:BD 0.63324177 1
1 227320825 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.921;LDAF=0.1334;AVGPOST=0.9790;RSQ=0.9323;ERATE=0.0014;THETA=0.0002;AC=280;AN=2184 GT:DS:GL:BD 0.12820514 0
1 227320849 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.318;LDAF=0.0187;AVGPOST=0.9788;RSQ=0.5695;ERATE=0.0009;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 227320867 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.933;LDAF=0.6825;AVGPOST=0.9292;RSQ=0.8757;ERATE=0.0043;THETA=0.0003;AC=1518;AN=2184 GT:DS:GL:BD 0.69505495 1
1 227320876 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.926;LDAF=0.6680;AVGPOST=0.9190;RSQ=0.8564;ERATE=0.0061;THETA=0.0002;AC=1493;AN=2184 GT:DS:GL:BD 0.68360806 1
1 227320879 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.887;LDAF=0.0697;AVGPOST=0.9882;RSQ=0.9300;ERATE=0.0009;THETA=0.0005;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 227320893 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.941;BRSQ=0.830;LDAF=0.7650;AVGPOST=0.8732;RSQ=0.7316;ERATE=0.0092;THETA=0.0006;AC=1730;AN=2184 GT:DS:GL:BD 0.79212457 1
1 227320944 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.739;LDAF=0.0477;AVGPOST=0.9834;RSQ=0.8582;ERATE=0.0013;THETA=0.0006;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 227320948 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.912;BRSQ=0.800;LDAF=0.6590;AVGPOST=0.8467;RSQ=0.7290;ERATE=0.0126;THETA=0.0004;AC=1483;AN=2184 GT:DS:GL:BD 0.67902929 1
1 227321012 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.858;BRSQ=0.700;LDAF=0.6132;AVGPOST=0.7720;RSQ=0.5973;ERATE=0.0256;THETA=0.0006;AC=1418;AN=2184 GT:DS:GL:BD 0.64926738 1
1 227321013 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.940;LDAF=0.0389;AVGPOST=0.9954;RSQ=0.9465;ERATE=0.0009;THETA=0.0059;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 227321057 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.969;LDAF=0.1847;AVGPOST=0.9622;RSQ=0.9044;ERATE=0.0025;THETA=0.0003;AC=394;AN=2184 GT:DS:GL:BD 0.18040293 0
1 227321139 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.949;BRSQ=0.770;LDAF=0.1509;AVGPOST=0.9059;RSQ=0.7195;ERATE=0.0082;THETA=0.0004;AC=285;AN=2184 GT:DS:GL:BD 0.13049451 0
1 227321204 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.965;LDAF=0.0728;AVGPOST=0.9797;RSQ=0.9012;ERATE=0.0011;THETA=0.0024;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 227321275 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.898;BRSQ=0.690;LDAF=0.1907;AVGPOST=0.9026;RSQ=0.7685;ERATE=0.0151;THETA=0.0019;AC=385;AN=2184 GT:DS:GL:BD 0.17628205 0
1 227321603 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.574;LDAF=0.0017;AVGPOST=0.9982;RSQ=0.5248;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227321838 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0360;AVGPOST=0.9989;RSQ=0.9887;ERATE=0.0003;THETA=0.0008;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 227322075 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8659;AVGPOST=0.9994;RSQ=0.9978;ERATE=0.0003;THETA=0.0010;AC=1892;AN=2184 GT:DS:GL:BD 0.86630034 1
1 227322140 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6472;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227322203 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0116;AVGPOST=0.9982;RSQ=0.9429;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 227322206 rs35508702 CCTAA C 15825 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1321;AVGPOST=0.9958;RSQ=0.9834;ERATE=0.0004;THETA=0.0005;AC=289;AN=2184 GT:DS:GL:BD 0.13232601 0
1 227322226 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0111;AVGPOST=0.9995;RSQ=0.9793;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 227322329 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0032;AVGPOST=0.9981;RSQ=0.7891;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227322369 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7063;AVGPOST=0.9988;RSQ=0.9973;ERATE=0.0004;THETA=0.0002;AC=1542;AN=2184 GT:DS:GL:BD 0.70604396 1
1 227322436 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0021;AVGPOST=0.9977;RSQ=0.5382;ERATE=0.0006;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227322506 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8288;AVGPOST=0.9987;RSQ=0.9961;ERATE=0.0004;THETA=0.0006;AC=1810;AN=2184 GT:DS:GL:BD 0.82875460 1
1 227322535 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.975;LDAF=0.1360;AVGPOST=0.9892;RSQ=0.9683;ERATE=0.0022;THETA=0.0004;AC=295;AN=2184 GT:DS:GL:BD 0.13507326 0
1 227322576 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7059;AVGPOST=0.9987;RSQ=0.9971;ERATE=0.0005;THETA=0.0004;AC=1542;AN=2184 GT:DS:GL:BD 0.70604396 1
1 227322620 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.798;LDAF=0.0048;AVGPOST=0.9988;RSQ=0.8916;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227322622 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0386;AVGPOST=0.9990;RSQ=0.9909;ERATE=0.0002;THETA=0.0005;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 227322676 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1237;AVGPOST=0.9993;RSQ=0.9972;ERATE=0.0003;THETA=0.0010;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 227322687 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.783;LDAF=0.0038;AVGPOST=0.9988;RSQ=0.8828;ERATE=0.0002;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227322688 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0115;AVGPOST=0.9990;RSQ=0.9732;ERATE=0.0003;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 227322701 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.7804;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227322711 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0017;AVGPOST=0.9987;RSQ=0.6970;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227322744 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0053;AVGPOST=0.9994;RSQ=0.9473;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227322749 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7193;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227322844 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227322879 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6620;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227322924 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6923;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227323018 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0040;AVGPOST=0.9992;RSQ=0.9265;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227323064 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.1587;AVGPOST=0.9976;RSQ=0.9929;ERATE=0.0005;THETA=0.0005;AC=348;AN=2184 GT:DS:GL:BD 0.15934066 0
1 227323154 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7060;AVGPOST=0.9991;RSQ=0.9979;ERATE=0.0003;THETA=0.0003;AC=1542;AN=2184 GT:DS:GL:BD 0.70604396 1
1 227323184 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227323249 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=1.0000;RSQ=0.9941;ERATE=0.0002;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227323260 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5940;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227323303 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0047;AVGPOST=0.9986;RSQ=0.8814;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227323304 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0335;AVGPOST=0.9995;RSQ=0.9939;ERATE=0.0003;THETA=0.0040;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 227323316 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1237;AVGPOST=0.9981;RSQ=0.9930;ERATE=0.0004;THETA=0.0008;AC=270;AN=2184 GT:DS:GL:BD 0.12362637 0
1 227323331 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4245;ERATE=0.0005;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227323338 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.717;LDAF=0.0069;AVGPOST=0.9953;RSQ=0.7617;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227323370 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7759;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227323447 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.588;LDAF=0.0045;AVGPOST=0.9951;RSQ=0.5746;ERATE=0.0007;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227323535 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.572;LDAF=0.0057;AVGPOST=0.9949;RSQ=0.6350;ERATE=0.0007;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227323542 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.654;LDAF=0.0210;AVGPOST=0.9919;RSQ=0.8491;ERATE=0.0015;THETA=0.0002;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 227323656 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0006;AVGPOST=0.9989;RSQ=0.3063;ERATE=0.0003;THETA=0.0008;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 227323761 . G GA 73 PASS INDEL;BAVGPOST=0.999;BRSQ=0.706;LDAF=0.0041;AVGPOST=0.9956;RSQ=0.6216;ERATE=0.0007;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227323783 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0044;AVGPOST=0.9989;RSQ=0.9028;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227323787 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0326;AVGPOST=0.9995;RSQ=0.9937;ERATE=0.0002;THETA=0.0004;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 227323869 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.7947;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227323884 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.614;LDAF=0.0008;AVGPOST=0.9998;RSQ=0.9110;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227323914 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.9094;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227324117 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5352;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227324144 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5040;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227324212 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7891;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227324308 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3420;AVGPOST=0.9960;RSQ=0.9924;ERATE=0.0009;THETA=0.0002;AC=748;AN=2184 GT:DS:GL:BD 0.34249085 0
1 227324354 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227324418 . GTTA G 273 PASS INDEL;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0035;AVGPOST=0.9985;RSQ=0.8333;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227324589 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0598;AVGPOST=0.9989;RSQ=0.9938;ERATE=0.0003;THETA=0.0002;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 227324593 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.9094;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227324674 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8644;AVGPOST=0.9989;RSQ=0.9961;ERATE=0.0003;THETA=0.0005;AC=1888;AN=2184 GT:DS:GL:BD 0.86446887 1
1 227324685 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5058;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227324687 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.797;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7758;ERATE=0.0003;THETA=0.0015;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227324730 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0018;AVGPOST=0.9988;RSQ=0.7377;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227324742 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.784;LDAF=0.9871;AVGPOST=0.9954;RSQ=0.8590;ERATE=0.0006;THETA=0.0006;AC=2157;AN=2184 GT:DS:GL:BD 0.98763734 1
1 227324813 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1242;AVGPOST=0.9990;RSQ=0.9963;ERATE=0.0003;THETA=0.0002;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 227324869 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0038;AVGPOST=0.9992;RSQ=0.9174;ERATE=0.0002;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227324873 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8197;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227324875 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.964;LDAF=0.0406;AVGPOST=0.9966;RSQ=0.9663;ERATE=0.0003;THETA=0.0003;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 227324893 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.8012;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227325008 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.8297;AVGPOST=0.9989;RSQ=0.9965;ERATE=0.0002;THETA=0.0003;AC=1813;AN=2184 GT:DS:GL:BD 0.83012819 1
1 227325014 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7062;AVGPOST=0.9986;RSQ=0.9970;ERATE=0.0004;THETA=0.0002;AC=1542;AN=2184 GT:DS:GL:BD 0.70604396 1
1 227325028 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0082;AVGPOST=0.9995;RSQ=0.9747;ERATE=0.0002;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 227325056 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9916;ERATE=0.0002;THETA=0.0001;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227325067 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2177;AVGPOST=0.9985;RSQ=0.9963;ERATE=0.0004;THETA=0.0025;AC=474;AN=2184 GT:DS:GL:BD 0.21703297 0
1 227325117 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0035;AVGPOST=0.9992;RSQ=0.8960;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227325245 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3427;AVGPOST=0.9966;RSQ=0.9935;ERATE=0.0007;THETA=0.0001;AC=750;AN=2184 GT:DS:GL:BD 0.34340659 0
1 227325248 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227325273 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1508;AVGPOST=0.9982;RSQ=0.9938;ERATE=0.0003;THETA=0.0003;AC=328;AN=2184 GT:DS:GL:BD 0.15018316 0
1 227325274 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0649;AVGPOST=0.9993;RSQ=0.9948;ERATE=0.0003;THETA=0.0002;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 227325398 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6296;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227325466 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.2234;AVGPOST=0.9960;RSQ=0.9916;ERATE=0.0009;THETA=0.0002;AC=486;AN=2184 GT:DS:GL:BD 0.22252747 0
1 227325491 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.834;LDAF=0.0018;AVGPOST=0.9996;RSQ=0.9122;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227325528 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8661;AVGPOST=0.9995;RSQ=0.9979;ERATE=0.0003;THETA=0.0004;AC=1892;AN=2184 GT:DS:GL:BD 0.86630034 1
1 227325603 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0161;AVGPOST=0.9988;RSQ=0.9761;ERATE=0.0003;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 227325609 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7054;AVGPOST=0.9984;RSQ=0.9965;ERATE=0.0005;THETA=0.0006;AC=1541;AN=2184 GT:DS:GL:BD 0.70558608 1
1 227325618 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0011;AVGPOST=0.9984;RSQ=0.4688;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227325693 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1492;AVGPOST=0.9989;RSQ=0.9961;ERATE=0.0003;THETA=0.0002;AC=325;AN=2184 GT:DS:GL:BD 0.14880952 0
1 227325694 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0088;AVGPOST=0.9997;RSQ=0.9850;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 227325746 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8292;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227325759 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1300;AVGPOST=0.9991;RSQ=0.9966;ERATE=0.0003;THETA=0.0003;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 227325816 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0366;AVGPOST=0.9990;RSQ=0.9903;ERATE=0.0003;THETA=0.0006;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 227325863 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4844;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227325897 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.7074;AVGPOST=0.9968;RSQ=0.9939;ERATE=0.0007;THETA=0.0002;AC=1544;AN=2184 GT:DS:GL:BD 0.70695972 1
1 227325919 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6913;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227325972 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0653;AVGPOST=0.9984;RSQ=0.9898;ERATE=0.0003;THETA=0.0003;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 227325984 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.588;LDAF=0.0006;AVGPOST=0.9991;RSQ=0.3569;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227326048 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.893;LDAF=0.0078;AVGPOST=0.9989;RSQ=0.9382;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227326195 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.863;LDAF=0.0049;AVGPOST=0.9989;RSQ=0.9116;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227326282 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9905;ERATE=0.0002;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227326289 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7349;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227326347 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6611;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227326411 . TAGTC T 1005 PASS INDEL;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0068;AVGPOST=0.9993;RSQ=0.9599;ERATE=0.0002;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 227326460 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0111;AVGPOST=0.9995;RSQ=0.9799;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 227326472 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3423;AVGPOST=0.9990;RSQ=0.9981;ERATE=0.0003;THETA=0.0003;AC=748;AN=2184 GT:DS:GL:BD 0.34249085 0
1 227326504 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8648;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227326524 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0877;AVGPOST=0.9989;RSQ=0.9933;ERATE=0.0002;THETA=0.0002;AC=191;AN=2184 GT:DS:GL:BD 0.08745421 0
1 227326534 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.919;LDAF=0.0149;AVGPOST=0.9978;RSQ=0.9380;ERATE=0.0005;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 227326581 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.1500;AVGPOST=0.9995;RSQ=0.9980;ERATE=0.0003;THETA=0.0004;AC=327;AN=2184 GT:DS:GL:BD 0.14972527 0
1 227326634 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.8291;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227326668 . C CAG 82 PASS INDEL;BAVGPOST=0.999;BRSQ=0.718;LDAF=0.0032;AVGPOST=0.9959;RSQ=0.4978;ERATE=0.0008;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227326896 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227326936 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227326944 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7520;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227327125 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9914;ERATE=0.0002;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227327131 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0026;AVGPOST=0.9996;RSQ=0.9489;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227327133 . CTG C 910 PASS INDEL;BAVGPOST=0.997;BRSQ=0.828;LDAF=0.0100;AVGPOST=0.9963;RSQ=0.8461;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 227327398 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227327445 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227327454 . G GA 111 PASS INDEL;BAVGPOST=0.989;BRSQ=0.533;LDAF=0.0252;AVGPOST=0.9686;RSQ=0.5018;ERATE=0.0049;THETA=0.0002;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 227327502 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0361;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 227327527 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0361;AVGPOST=0.9996;RSQ=0.9951;ERATE=0.0003;THETA=0.0004;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 227327564 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8563;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227327604 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7694;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227327732 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8658;AVGPOST=0.9993;RSQ=0.9972;ERATE=0.0004;THETA=0.0003;AC=1892;AN=2184 GT:DS:GL:BD 0.86630034 1
1 227327775 . A AC 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.6148;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227327831 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.725;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227327869 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7045;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227327938 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0194;AVGPOST=0.9981;RSQ=0.9606;ERATE=0.0002;THETA=0.0002;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 227327950 . TATTCC T 94 PASS INDEL;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7664;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227327981 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2172;AVGPOST=0.9985;RSQ=0.9963;ERATE=0.0004;THETA=0.0003;AC=474;AN=2184 GT:DS:GL:BD 0.21703297 0
1 227327983 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227328005 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0391;AVGPOST=0.9995;RSQ=0.9955;ERATE=0.0002;THETA=0.0003;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 227328018 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227328073 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.8294;AVGPOST=0.9989;RSQ=0.9968;ERATE=0.0003;THETA=0.0006;AC=1813;AN=2184 GT:DS:GL:BD 0.83012819 1
1 227328388 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0325;AVGPOST=0.9998;RSQ=0.9975;ERATE=0.0002;THETA=0.0004;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 227328527 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.822;LDAF=0.0030;AVGPOST=0.9989;RSQ=0.8499;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227328549 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227328649 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8660;AVGPOST=0.9998;RSQ=0.9991;ERATE=0.0003;THETA=0.0002;AC=1892;AN=2184 GT:DS:GL:BD 0.86630034 1
1 227328681 . CTG C 545 PASS INDEL;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8120;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227328735 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8660;AVGPOST=0.9999;RSQ=0.9995;ERATE=0.0002;THETA=0.0001;AC=1892;AN=2184 GT:DS:GL:BD 0.86630034 1
1 227328743 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7056;AVGPOST=0.9995;RSQ=0.9989;ERATE=0.0003;THETA=0.0003;AC=1541;AN=2184 GT:DS:GL:BD 0.70558608 1
1 227328747 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227328855 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227328967 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.7029;AVGPOST=0.9970;RSQ=0.9938;ERATE=0.0011;THETA=0.0005;AC=1537;AN=2184 GT:DS:GL:BD 0.70375460 1
1 227328975 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6765;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227329006 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0363;AVGPOST=0.9996;RSQ=0.9952;ERATE=0.0002;THETA=0.0001;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 227329044 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1243;AVGPOST=0.9998;RSQ=0.9991;ERATE=0.0002;THETA=0.0003;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 227329072 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227329086 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227329118 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6422;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227329183 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0013;AVGPOST=0.9998;RSQ=0.9395;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227329226 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8299;AVGPOST=0.9996;RSQ=0.9987;ERATE=0.0003;THETA=0.0002;AC=1813;AN=2184 GT:DS:GL:BD 0.83012819 1
1 227329231 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7057;AVGPOST=0.9996;RSQ=0.9991;ERATE=0.0003;THETA=0.0003;AC=1541;AN=2184 GT:DS:GL:BD 0.70558608 1
1 227329270 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0029;AVGPOST=0.9990;RSQ=0.8656;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227329279 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7841;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227329286 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9998;RSQ=0.9710;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227329400 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7512;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227329445 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227329505 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7679;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227329536 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6963;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227329577 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.1301;AVGPOST=0.9979;RSQ=0.9934;ERATE=0.0003;THETA=0.0005;AC=285;AN=2184 GT:DS:GL:BD 0.13049451 0
1 227329639 . CAG C 836 PASS INDEL;BAVGPOST=0.995;BRSQ=0.779;LDAF=0.0129;AVGPOST=0.9952;RSQ=0.8629;ERATE=0.0005;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227329770 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1243;AVGPOST=0.9999;RSQ=0.9994;ERATE=0.0002;THETA=0.0001;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 227329866 . T TA 22 PASS INDEL;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6082;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227329879 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6633;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227329942 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9313;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227330105 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9141;ERATE=0.0002;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227330156 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8259;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227330188 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5588;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227330225 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8660;AVGPOST=0.9996;RSQ=0.9984;ERATE=0.0003;THETA=0.0002;AC=1892;AN=2184 GT:DS:GL:BD 0.86630034 1
1 227330240 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8446;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227330269 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7036;AVGPOST=0.9989;RSQ=0.9976;ERATE=0.0003;THETA=0.0009;AC=1537;AN=2184 GT:DS:GL:BD 0.70375460 1
1 227330276 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.1243;AVGPOST=0.9992;RSQ=0.9970;ERATE=0.0003;THETA=0.0001;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 227330277 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9069;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227330300 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.980;LDAF=0.1062;AVGPOST=0.9969;RSQ=0.9868;ERATE=0.0003;THETA=0.0002;AC=230;AN=2184 GT:DS:GL:BD 0.10531136 0
1 227330381 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.782;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5338;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227330385 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0061;AVGPOST=0.9994;RSQ=0.9559;ERATE=0.0002;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227330446 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.530;LDAF=0.0023;AVGPOST=0.9984;RSQ=0.7268;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227330488 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.987;LDAF=0.8633;AVGPOST=0.9962;RSQ=0.9880;ERATE=0.0006;THETA=0.0004;AC=1889;AN=2184 GT:DS:GL:BD 0.86492676 1
1 227330540 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9882;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227330579 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227330752 . GAAAT G 202 PASS INDEL;BAVGPOST=1.000;BRSQ=0.721;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5025;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227330756 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227330759 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7057;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=1541;AN=2184 GT:DS:GL:BD 0.70558608 1
1 227330760 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227330783 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1499;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=327;AN=2184 GT:DS:GL:BD 0.14972527 0
1 227330843 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9599;ERATE=0.0007;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227330850 . TG T 1590 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0162;AVGPOST=0.9981;RSQ=0.9588;ERATE=0.0004;THETA=0.0002;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 227330887 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6553;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227330951 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1243;AVGPOST=0.9998;RSQ=0.9991;ERATE=0.0003;THETA=0.0003;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 227331000 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0104;AVGPOST=0.9992;RSQ=0.9743;ERATE=0.0002;THETA=0.0001;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 227331031 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0091;AVGPOST=0.9993;RSQ=0.9740;ERATE=0.0003;THETA=0.0007;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 227331089 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0019;AVGPOST=0.9994;RSQ=0.8580;ERATE=0.0003;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227331101 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0876;AVGPOST=0.9984;RSQ=0.9919;ERATE=0.0003;THETA=0.0046;AC=191;AN=2184 GT:DS:GL:BD 0.08745421 0
1 227331275 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0640;AVGPOST=0.9979;RSQ=0.9886;ERATE=0.0004;THETA=0.0004;AC=138;AN=2184 GT:DS:GL:BD 0.06318682 0
1 227331293 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1299;AVGPOST=0.9995;RSQ=0.9982;ERATE=0.0002;THETA=0.0004;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 227331349 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.979;LDAF=0.1273;AVGPOST=0.9940;RSQ=0.9826;ERATE=0.0003;THETA=0.0002;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 227331491 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5905;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227331496 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.8334;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227331527 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.7049;AVGPOST=0.9967;RSQ=0.9931;ERATE=0.0011;THETA=0.0002;AC=1541;AN=2184 GT:DS:GL:BD 0.70558608 1
1 227331578 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.954;LDAF=0.9691;AVGPOST=0.9974;RSQ=0.9642;ERATE=0.0003;THETA=0.0002;AC=2115;AN=2184 GT:DS:GL:BD 0.96840662 1
1 227331735 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5703;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227331748 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0018;AVGPOST=0.9977;RSQ=0.4363;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227331781 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6819;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227331840 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0107;AVGPOST=0.9986;RSQ=0.9535;ERATE=0.0002;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 227331853 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.8613;AVGPOST=0.9917;RSQ=0.9742;ERATE=0.0012;THETA=0.0002;AC=1885;AN=2184 GT:DS:GL:BD 0.86309522 1
1 227331898 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.706;LDAF=0.0027;AVGPOST=0.9986;RSQ=0.8022;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227331911 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4915;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227332043 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.974;LDAF=0.8421;AVGPOST=0.9791;RSQ=0.9417;ERATE=0.0022;THETA=0.0008;AC=1848;AN=2184 GT:DS:GL:BD 0.84615386 1
1 227332053 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.807;LDAF=0.0112;AVGPOST=0.9992;RSQ=0.9712;ERATE=0.0003;THETA=0.0013;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 227332074 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.637;LDAF=0.0054;AVGPOST=0.9936;RSQ=0.5835;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227332148 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.983;LDAF=0.3363;AVGPOST=0.9927;RSQ=0.9872;ERATE=0.0005;THETA=0.0003;AC=737;AN=2184 GT:DS:GL:BD 0.33745420 0
1 227332229 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.921;LDAF=0.1226;AVGPOST=0.9929;RSQ=0.9754;ERATE=0.0013;THETA=0.0003;AC=266;AN=2184 GT:DS:GL:BD 0.12179487 0
1 227332263 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.592;LDAF=0.0093;AVGPOST=0.9928;RSQ=0.6897;ERATE=0.0006;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 227332389 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0088;AVGPOST=0.9999;RSQ=0.9924;ERATE=0.0002;THETA=0.0010;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 227332396 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9865;ERATE=0.0002;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227332447 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227332462 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.789;LDAF=0.0030;AVGPOST=0.9981;RSQ=0.7477;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227332532 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7125;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227332543 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1243;AVGPOST=0.9996;RSQ=0.9983;ERATE=0.0003;THETA=0.0003;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 227332726 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227332749 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7057;AVGPOST=0.9989;RSQ=0.9975;ERATE=0.0004;THETA=0.0002;AC=1541;AN=2184 GT:DS:GL:BD 0.70558608 1
1 227332760 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.808;LDAF=0.0079;AVGPOST=0.9981;RSQ=0.9006;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227332810 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5545;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227332882 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6049;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227332895 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9387;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227333025 . CTTAAT C 121 PASS INDEL;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227333054 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0002;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227333055 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8300;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1813;AN=2184 GT:DS:GL:BD 0.83012819 1
1 227333141 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1251;AVGPOST=0.9998;RSQ=0.9993;ERATE=0.0002;THETA=0.0003;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 227333147 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8313;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227333160 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227333175 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0594;AVGPOST=1.0000;RSQ=0.9997;ERATE=0.0002;THETA=0.0005;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 227333195 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227333500 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227333644 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0026;AVGPOST=0.9996;RSQ=0.9489;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227333772 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0052;AVGPOST=0.9997;RSQ=0.9708;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227333777 . CAT C 106 PASS INDEL;BAVGPOST=0.999;BRSQ=0.712;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6567;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227333779 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7641;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227333799 . TTAAC T 249 PASS INDEL;BAVGPOST=0.999;BRSQ=0.880;LDAF=0.0059;AVGPOST=0.9980;RSQ=0.8455;ERATE=0.0005;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227333849 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0380;AVGPOST=0.9997;RSQ=0.9965;ERATE=0.0003;THETA=0.0006;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 227334031 . CTACAA C 267 PASS INDEL;BAVGPOST=0.999;BRSQ=0.753;LDAF=0.0044;AVGPOST=0.9962;RSQ=0.6585;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227334320 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8519;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227334326 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0143;AVGPOST=0.9992;RSQ=0.9829;ERATE=0.0002;THETA=0.0002;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 227334453 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9658;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227334495 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.842;LDAF=0.0088;AVGPOST=0.9992;RSQ=0.9579;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 227334565 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0039;AVGPOST=0.9994;RSQ=0.9258;ERATE=0.0004;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227334574 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1508;AVGPOST=0.9960;RSQ=0.9892;ERATE=0.0003;THETA=0.0006;AC=326;AN=2184 GT:DS:GL:BD 0.14926741 0
1 227334661 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9345;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227334945 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8692;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227335051 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227335084 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0037;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227335296 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8778;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227335329 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2286;AVGPOST=0.9995;RSQ=0.9987;ERATE=0.0002;THETA=0.0005;AC=498;AN=2184 GT:DS:GL:BD 0.22802198 0
1 227335336 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0056;AVGPOST=0.9999;RSQ=0.9898;ERATE=0.0002;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227335398 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227335401 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8771;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227335441 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8316;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227335468 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5052;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227335542 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8005;ERATE=0.0002;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227335644 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0649;AVGPOST=0.9996;RSQ=0.9973;ERATE=0.0003;THETA=0.0003;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 227335783 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2226;AVGPOST=0.9995;RSQ=0.9985;ERATE=0.0003;THETA=0.0002;AC=485;AN=2184 GT:DS:GL:BD 0.22206959 0
1 227335801 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7055;AVGPOST=0.9992;RSQ=0.9981;ERATE=0.0002;THETA=0.0003;AC=1541;AN=2184 GT:DS:GL:BD 0.70558608 1
1 227335823 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.3999;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227335915 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1669;AVGPOST=0.9959;RSQ=0.9890;ERATE=0.0004;THETA=0.0004;AC=364;AN=2184 GT:DS:GL:BD 0.16666667 0
1 227335966 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.529;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227336168 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9662;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227336447 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.643;LDAF=0.0099;AVGPOST=0.9952;RSQ=0.7977;ERATE=0.0006;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 227336604 . T TA 209 PASS INDEL;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0034;AVGPOST=0.9980;RSQ=0.7912;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227336655 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0158;AVGPOST=0.9995;RSQ=0.9881;ERATE=0.0003;THETA=0.0008;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 227336696 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6465;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227336719 rs59028962 AG A 7660 PASS INDEL;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0601;AVGPOST=0.9984;RSQ=0.9915;ERATE=0.0003;THETA=0.0003;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 227336722 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7057;AVGPOST=0.9983;RSQ=0.9965;ERATE=0.0003;THETA=0.0003;AC=1541;AN=2184 GT:DS:GL:BD 0.70558608 1
1 227336794 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0088;AVGPOST=0.9996;RSQ=0.9782;ERATE=0.0002;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 227336821 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.933;LDAF=0.0138;AVGPOST=0.9989;RSQ=0.9655;ERATE=0.0003;THETA=0.0002;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 227336876 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.2397;AVGPOST=0.9983;RSQ=0.9959;ERATE=0.0003;THETA=0.0002;AC=523;AN=2184 GT:DS:GL:BD 0.23946886 0
1 227337058 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227337106 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.867;LDAF=0.0159;AVGPOST=0.9989;RSQ=0.9718;ERATE=0.0003;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 227337169 . CTATTA C 750 PASS INDEL;BAVGPOST=0.997;BRSQ=0.589;LDAF=0.0032;AVGPOST=0.9996;RSQ=0.9390;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227337175 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0654;AVGPOST=0.9992;RSQ=0.9959;ERATE=0.0002;THETA=0.0002;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 227337457 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7739;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227337701 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.958;LDAF=0.8559;AVGPOST=0.9894;RSQ=0.9673;ERATE=0.0012;THETA=0.0002;AC=1879;AN=2184 GT:DS:GL:BD 0.86034799 1
1 227337702 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.965;LDAF=0.8544;AVGPOST=0.9904;RSQ=0.9722;ERATE=0.0007;THETA=0.0029;AC=1872;AN=2184 GT:DS:GL:BD 0.85714287 1
1 227337857 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8287;AVGPOST=0.9971;RSQ=0.9919;ERATE=0.0007;THETA=0.0003;AC=1813;AN=2184 GT:DS:GL:BD 0.83012819 1
1 227337889 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5272;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227337930 . A AC 126 PASS INDEL;BAVGPOST=0.999;BRSQ=0.620;LDAF=0.0028;AVGPOST=0.9977;RSQ=0.6658;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227337939 . C CA 202 PASS INDEL;BAVGPOST=0.983;BRSQ=0.431;LDAF=0.0386;AVGPOST=0.9472;RSQ=0.4631;ERATE=0.0072;THETA=0.0006;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 227338065 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5348;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227338130 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0004;AVGPOST=0.9998;RSQ=0.7656;ERATE=0.0002;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227338352 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.649;LDAF=0.0026;AVGPOST=0.9977;RSQ=0.6173;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227338370 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7052;AVGPOST=0.9963;RSQ=0.9927;ERATE=0.0005;THETA=0.0002;AC=1542;AN=2184 GT:DS:GL:BD 0.70604396 1
1 227338478 . TA T 344 PASS INDEL;BAVGPOST=0.997;BRSQ=0.790;LDAF=0.0062;AVGPOST=0.9987;RSQ=0.9066;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227338539 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.929;BRSQ=0.776;LDAF=0.2343;AVGPOST=0.8470;RSQ=0.6584;ERATE=0.0461;THETA=0.0002;AC=426;AN=2184 GT:DS:GL:BD 0.19505495 0
1 227338570 . GA G 18198 PASS INDEL;BAVGPOST=0.970;BRSQ=0.941;LDAF=0.4839;AVGPOST=0.9269;RSQ=0.8845;ERATE=0.0130;THETA=0.0007;AC=1056;AN=2184 GT:DS:GL:BD 0.48351648 0
1 227338648 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8467;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227338707 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0056;AVGPOST=0.9991;RSQ=0.9350;ERATE=0.0003;THETA=0.0020;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227338862 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.8622;AVGPOST=0.9908;RSQ=0.9717;ERATE=0.0022;THETA=0.0006;AC=1888;AN=2184 GT:DS:GL:BD 0.86446887 1
1 227338872 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7740;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227338879 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.756;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8443;ERATE=0.0002;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227338917 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6228;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227338923 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6941;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227339049 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0157;AVGPOST=0.9996;RSQ=0.9891;ERATE=0.0003;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 227339086 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.720;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.5142;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227339211 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0645;AVGPOST=0.9997;RSQ=0.9979;ERATE=0.0003;THETA=0.0002;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 227339258 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9885;ERATE=0.0002;THETA=0.0023;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227339267 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0088;AVGPOST=0.9999;RSQ=0.9924;ERATE=0.0002;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 227339334 . A AT 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6808;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227339368 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227339435 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0362;AVGPOST=0.9998;RSQ=0.9975;ERATE=0.0003;THETA=0.0003;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 227339515 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.678;LDAF=0.0027;AVGPOST=0.9970;RSQ=0.5835;ERATE=0.0006;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227339561 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7059;AVGPOST=0.9978;RSQ=0.9956;ERATE=0.0004;THETA=0.0005;AC=1540;AN=2184 GT:DS:GL:BD 0.70512819 1
1 227339582 rs58336726 C CA 3121 PASS INDEL;BAVGPOST=0.794;BRSQ=0.453;LDAF=0.6917;AVGPOST=0.7322;RSQ=0.4999;ERATE=0.0199;THETA=0.0024;AC=1594;AN=2184 GT:DS:GL:BD 0.72985345 1
1 227339602 . A AAAT 20 PASS INDEL;BAVGPOST=0.847;BRSQ=0.088;LDAF=0.1996;AVGPOST=0.7209;RSQ=0.2864;ERATE=0.0239;THETA=0.0006;AC=208;AN=2184 GT:DS:GL:BD 0.09523810 0
1 227339641 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0056;AVGPOST=0.9979;RSQ=0.8591;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227339646 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.733;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4448;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227339657 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.765;LDAF=0.0033;AVGPOST=0.9979;RSQ=0.7265;ERATE=0.0005;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227339757 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9292;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227339843 . CAT C 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0024;AVGPOST=0.9986;RSQ=0.7478;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227339895 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2167;AVGPOST=0.9995;RSQ=0.9987;ERATE=0.0003;THETA=0.0003;AC=472;AN=2184 GT:DS:GL:BD 0.21611722 0
1 227339945 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.767;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7490;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227339960 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1245;AVGPOST=0.9985;RSQ=0.9949;ERATE=0.0004;THETA=0.0006;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 227339995 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6846;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227340036 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7070;AVGPOST=0.9978;RSQ=0.9954;ERATE=0.0006;THETA=0.0003;AC=1544;AN=2184 GT:DS:GL:BD 0.70695972 1
1 227340150 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0044;AVGPOST=0.9978;RSQ=0.8145;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227340181 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7676;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227340191 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3424;AVGPOST=0.9985;RSQ=0.9973;ERATE=0.0004;THETA=0.0001;AC=748;AN=2184 GT:DS:GL:BD 0.34249085 0
1 227340211 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9675;ERATE=0.0002;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227340230 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.837;LDAF=0.0077;AVGPOST=0.9977;RSQ=0.8868;ERATE=0.0002;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 227340266 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0388;AVGPOST=0.9995;RSQ=0.9950;ERATE=0.0003;THETA=0.0001;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 227340284 . C CA 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4892;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227340335 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0013;AVGPOST=0.9981;RSQ=0.5049;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227340376 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5793;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227340442 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227340507 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6856;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227340557 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0006;AVGPOST=0.9992;RSQ=0.5124;ERATE=0.0002;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227340640 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2290;AVGPOST=0.9981;RSQ=0.9953;ERATE=0.0003;THETA=0.0003;AC=498;AN=2184 GT:DS:GL:BD 0.22802198 0
1 227340650 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0023;AVGPOST=0.9974;RSQ=0.5380;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227340663 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.7064;AVGPOST=0.9978;RSQ=0.9959;ERATE=0.0003;THETA=0.0002;AC=1542;AN=2184 GT:DS:GL:BD 0.70604396 1
1 227340673 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.987;LDAF=0.7028;AVGPOST=0.9921;RSQ=0.9846;ERATE=0.0012;THETA=0.0003;AC=1538;AN=2184 GT:DS:GL:BD 0.70421243 1
1 227340687 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0158;AVGPOST=0.9994;RSQ=0.9845;ERATE=0.0003;THETA=0.0007;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 227340790 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1300;AVGPOST=0.9989;RSQ=0.9957;ERATE=0.0003;THETA=0.0002;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 227340936 rs34205024 G GA 33038 PASS INDEL;BAVGPOST=0.981;BRSQ=0.962;LDAF=0.5423;AVGPOST=0.9475;RSQ=0.9191;ERATE=0.0105;THETA=0.0002;AC=1196;AN=2184 GT:DS:GL:BD 0.54761904 1
1 227340966 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.6960;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227341029 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1499;AVGPOST=0.9986;RSQ=0.9947;ERATE=0.0003;THETA=0.0004;AC=327;AN=2184 GT:DS:GL:BD 0.14972527 0
1 227341096 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0029;AVGPOST=0.9974;RSQ=0.6495;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227341250 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.481;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7520;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227341359 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.819;LDAF=0.0030;AVGPOST=0.9990;RSQ=0.8777;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227341359 . TG T 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5519;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227341367 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227341374 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0650;AVGPOST=0.9987;RSQ=0.9920;ERATE=0.0004;THETA=0.0004;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 227341471 . TAGA T 73 PASS INDEL;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6880;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227341480 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0039;AVGPOST=0.9996;RSQ=0.9490;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227341544 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8158;AVGPOST=0.9992;RSQ=0.9979;ERATE=0.0003;THETA=0.0005;AC=1782;AN=2184 GT:DS:GL:BD 0.81593406 1
1 227341661 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.723;LDAF=0.0037;AVGPOST=0.9972;RSQ=0.7014;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227341694 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8158;AVGPOST=0.9981;RSQ=0.9959;ERATE=0.0004;THETA=0.0007;AC=1782;AN=2184 GT:DS:GL:BD 0.81593406 1
1 227341715 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.708;LDAF=0.0022;AVGPOST=0.9989;RSQ=0.7849;ERATE=0.0003;THETA=0.0019;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227341728 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0075;AVGPOST=0.9997;RSQ=0.9812;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 227341823 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.948;LDAF=0.0192;AVGPOST=0.9991;RSQ=0.9805;ERATE=0.0002;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 227341840 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6680;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227341898 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7796;AVGPOST=0.9989;RSQ=0.9974;ERATE=0.0004;THETA=0.0004;AC=1703;AN=2184 GT:DS:GL:BD 0.77976191 1
1 227341982 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0158;AVGPOST=0.9995;RSQ=0.9869;ERATE=0.0003;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 227342125 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0023;AVGPOST=0.9967;RSQ=0.4868;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227342186 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0605;AVGPOST=0.9981;RSQ=0.9890;ERATE=0.0004;THETA=0.0004;AC=131;AN=2184 GT:DS:GL:BD 0.05998169 0
1 227342274 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0040;AVGPOST=0.9982;RSQ=0.8602;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227342346 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1301;AVGPOST=0.9985;RSQ=0.9948;ERATE=0.0004;THETA=0.0004;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 227342416 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227342475 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5489;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227342527 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5661;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227342582 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6492;AVGPOST=0.9970;RSQ=0.9940;ERATE=0.0006;THETA=0.0002;AC=1419;AN=2184 GT:DS:GL:BD 0.64972526 1
1 227342752 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0116;AVGPOST=0.9994;RSQ=0.9779;ERATE=0.0003;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227342783 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.642;LDAF=0.0004;AVGPOST=0.9991;RSQ=0.2072;ERATE=0.0003;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 227342798 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1598;AVGPOST=0.9977;RSQ=0.9929;ERATE=0.0004;THETA=0.0004;AC=348;AN=2184 GT:DS:GL:BD 0.15934066 0
1 227342858 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5605;ERATE=0.0002;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227342877 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0157;AVGPOST=0.9997;RSQ=0.9915;ERATE=0.0003;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 227342960 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6889;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227342972 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0362;AVGPOST=0.9994;RSQ=0.9919;ERATE=0.0003;THETA=0.0005;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 227343081 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0397;AVGPOST=0.9994;RSQ=0.9940;ERATE=0.0003;THETA=0.0005;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 227343112 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227343129 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1598;AVGPOST=0.9982;RSQ=0.9955;ERATE=0.0003;THETA=0.0011;AC=348;AN=2184 GT:DS:GL:BD 0.15934066 0
1 227343135 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0082;AVGPOST=0.9997;RSQ=0.9837;ERATE=0.0002;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 227343233 . A AG 1534 PASS INDEL;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0172;AVGPOST=0.9963;RSQ=0.9103;ERATE=0.0004;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 227343238 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.714;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6269;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227343240 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9643;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227343295 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.8384;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227343297 . GA G 17 PASS INDEL;BAVGPOST=0.973;BRSQ=0.036;LDAF=0.0669;AVGPOST=0.9142;RSQ=0.4875;ERATE=0.0030;THETA=0.0004;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 227343376 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.9098;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227343378 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8817;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227343401 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.7175;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227343544 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0092;AVGPOST=0.9985;RSQ=0.9367;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 227343741 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.986;LDAF=0.0912;AVGPOST=0.9977;RSQ=0.9888;ERATE=0.0004;THETA=0.0003;AC=199;AN=2184 GT:DS:GL:BD 0.09111722 0
1 227343757 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0041;AVGPOST=0.9991;RSQ=0.9118;ERATE=0.0002;THETA=0.0022;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227343794 . GAAATA G 108 PASS INDEL;BAVGPOST=1.000;BRSQ=0.752;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5519;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227343799 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0159;AVGPOST=0.9993;RSQ=0.9811;ERATE=0.0003;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 227343831 rs67247351 TG T 54138 PASS INDEL;BAVGPOST=0.990;BRSQ=0.395;LDAF=0.9797;AVGPOST=0.9870;RSQ=0.7632;ERATE=0.0013;THETA=0.0020;AC=2139;AN=2184 GT:DS:GL:BD 0.97939563 1
1 227343900 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7795;AVGPOST=0.9991;RSQ=0.9977;ERATE=0.0003;THETA=0.0004;AC=1703;AN=2184 GT:DS:GL:BD 0.77976191 1
1 227343929 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0031;AVGPOST=0.9976;RSQ=0.6925;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227344013 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0393;AVGPOST=0.9991;RSQ=0.9906;ERATE=0.0004;THETA=0.0008;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 227344160 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.770;BRSQ=0.169;LDAF=0.2095;AVGPOST=0.7549;RSQ=0.3969;ERATE=0.0220;THETA=0.0004;AC=307;AN=2184 GT:DS:GL:BD 0.14056776 0
1 227344282 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0039;AVGPOST=0.9992;RSQ=0.9194;ERATE=0.0002;THETA=0.0001;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227344392 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.7047;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227344421 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0652;AVGPOST=0.9988;RSQ=0.9925;ERATE=0.0002;THETA=0.0001;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 227344452 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0038;AVGPOST=0.9998;RSQ=0.9774;ERATE=0.0003;THETA=0.0001;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227344465 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1292;AVGPOST=0.9996;RSQ=0.9986;ERATE=0.0003;THETA=0.0001;AC=283;AN=2184 GT:DS:GL:BD 0.12957875 0
1 227344546 rs57648372 TGCA T 1707 PASS INDEL;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0092;AVGPOST=0.9986;RSQ=0.9259;ERATE=0.0004;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 227344597 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.742;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6589;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227344649 . T TG 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6061;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227344720 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0644;AVGPOST=0.9996;RSQ=0.9970;ERATE=0.0002;THETA=0.0003;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 227344726 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8216;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227344763 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227344764 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.9073;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227344780 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.862;LDAF=0.0037;AVGPOST=0.9995;RSQ=0.9414;ERATE=0.0003;THETA=0.0026;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227344815 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.723;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6806;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227344817 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8159;AVGPOST=0.9989;RSQ=0.9971;ERATE=0.0004;THETA=0.0004;AC=1782;AN=2184 GT:DS:GL:BD 0.81593406 1
1 227344836 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6288;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227344840 . CAGTT C 1803 PASS INDEL;BAVGPOST=0.998;BRSQ=0.906;LDAF=0.0110;AVGPOST=0.9995;RSQ=0.9815;ERATE=0.0002;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 227344961 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.875;LDAF=0.0126;AVGPOST=0.9984;RSQ=0.9491;ERATE=0.0002;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 227345080 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0118;AVGPOST=0.9990;RSQ=0.9666;ERATE=0.0003;THETA=0.0002;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 227345094 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2191;AVGPOST=0.9957;RSQ=0.9903;ERATE=0.0008;THETA=0.0014;AC=475;AN=2184 GT:DS:GL:BD 0.21749084 0
1 227345179 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.661;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6310;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227345285 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0067;AVGPOST=0.9992;RSQ=0.9545;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 227345335 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1298;AVGPOST=0.9982;RSQ=0.9933;ERATE=0.0005;THETA=0.0004;AC=283;AN=2184 GT:DS:GL:BD 0.12957875 0
1 227345346 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.870;LDAF=0.0050;AVGPOST=0.9994;RSQ=0.9527;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227345347 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5335;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227345365 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0066;AVGPOST=0.9995;RSQ=0.9648;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 227345429 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6963;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227345438 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0036;AVGPOST=0.9997;RSQ=0.9681;ERATE=0.0002;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227345545 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0023;AVGPOST=0.9980;RSQ=0.6711;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227345594 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227345625 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0087;AVGPOST=1.0000;RSQ=0.9975;ERATE=0.0002;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 227345681 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.681;LDAF=0.0062;AVGPOST=0.9947;RSQ=0.6616;ERATE=0.0009;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227345779 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.6184;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227345956 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9264;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227345993 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.745;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5519;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227346023 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.941;LDAF=0.0179;AVGPOST=0.9991;RSQ=0.9802;ERATE=0.0003;THETA=0.0002;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 227346045 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0112;AVGPOST=0.9996;RSQ=0.9837;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 227346060 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.7799;AVGPOST=0.9990;RSQ=0.9976;ERATE=0.0004;THETA=0.0002;AC=1703;AN=2184 GT:DS:GL:BD 0.77976191 1
1 227346126 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0061;AVGPOST=0.9991;RSQ=0.9508;ERATE=0.0002;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 227346213 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227346288 . TGGAA T 39 PASS INDEL;BAVGPOST=1.000;BRSQ=0.742;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.6292;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227346445 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.894;LDAF=0.0066;AVGPOST=0.9981;RSQ=0.8864;ERATE=0.0003;THETA=0.0010;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227346480 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6499;AVGPOST=0.9979;RSQ=0.9963;ERATE=0.0005;THETA=0.0003;AC=1419;AN=2184 GT:DS:GL:BD 0.64972526 1
1 227346681 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.745;LDAF=0.0029;AVGPOST=0.9970;RSQ=0.5769;ERATE=0.0010;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227346697 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0030;AVGPOST=0.9990;RSQ=0.8537;ERATE=0.0002;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227346992 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1503;AVGPOST=0.9979;RSQ=0.9923;ERATE=0.0004;THETA=0.0016;AC=327;AN=2184 GT:DS:GL:BD 0.14972527 0
1 227346993 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.7518;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227347151 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.709;LDAF=0.0033;AVGPOST=0.9968;RSQ=0.6347;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227347181 . TA T 78 PASS INDEL;BAVGPOST=0.973;BRSQ=0.436;LDAF=0.0589;AVGPOST=0.9220;RSQ=0.4443;ERATE=0.0128;THETA=0.0002;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 227347215 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.871;LDAF=0.0130;AVGPOST=0.9978;RSQ=0.9413;ERATE=0.0003;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 227347268 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.637;LDAF=0.0015;AVGPOST=0.9990;RSQ=0.7909;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227347426 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6094;ERATE=0.0004;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227347468 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.6522;AVGPOST=0.9979;RSQ=0.9960;ERATE=0.0005;THETA=0.0003;AC=1424;AN=2184 GT:DS:GL:BD 0.65201467 1
1 227347791 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8063;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227347795 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9882;ERATE=0.0002;THETA=0.0013;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227347883 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227347884 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.9071;ERATE=0.0003;THETA=0.0001;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227347934 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6428;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227347935 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1657;AVGPOST=0.9991;RSQ=0.9971;ERATE=0.0003;THETA=0.0004;AC=362;AN=2184 GT:DS:GL:BD 0.16575092 0
1 227347986 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0381;AVGPOST=0.9997;RSQ=0.9972;ERATE=0.0002;THETA=0.0008;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 227348062 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6223;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227348126 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1293;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=283;AN=2184 GT:DS:GL:BD 0.12957875 0
1 227348159 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0210;AVGPOST=1.0000;RSQ=0.9991;ERATE=0.0002;THETA=0.0003;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 227348223 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227348245 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0001;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227348349 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1020;AVGPOST=0.9999;RSQ=0.9995;ERATE=0.0003;THETA=0.0002;AC=222;AN=2184 GT:DS:GL:BD 0.10164835 0
1 227348473 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3364;AVGPOST=0.9981;RSQ=0.9970;ERATE=0.0003;THETA=0.0003;AC=734;AN=2184 GT:DS:GL:BD 0.33608058 0
1 227348484 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6237;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227348494 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227348850 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.984;LDAF=0.8167;AVGPOST=0.9983;RSQ=0.9953;ERATE=0.0004;THETA=0.0004;AC=1784;AN=2184 GT:DS:GL:BD 0.81684983 1
1 227348869 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0033;AVGPOST=0.9986;RSQ=0.8294;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227349123 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.773;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227349144 . A AT 1855 PASS INDEL;BAVGPOST=0.638;BRSQ=0.358;LDAF=0.3995;AVGPOST=0.6878;RSQ=0.4818;ERATE=0.0500;THETA=0.0002;AC=789;AN=2184 GT:DS:GL:BD 0.36126372 0
1 227349151 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.981;LDAF=0.7689;AVGPOST=0.9744;RSQ=0.9482;ERATE=0.0050;THETA=0.0002;AC=1690;AN=2184 GT:DS:GL:BD 0.77380955 1
1 227349322 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8157;AVGPOST=0.9990;RSQ=0.9973;ERATE=0.0003;THETA=0.0030;AC=1782;AN=2184 GT:DS:GL:BD 0.81593406 1
1 227349354 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0160;AVGPOST=0.9991;RSQ=0.9767;ERATE=0.0003;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 227349496 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227349539 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0382;AVGPOST=0.9994;RSQ=0.9931;ERATE=0.0003;THETA=0.0004;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 227349550 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1288;AVGPOST=0.9984;RSQ=0.9945;ERATE=0.0004;THETA=0.0013;AC=282;AN=2184 GT:DS:GL:BD 0.12912089 0
1 227349647 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0799;AVGPOST=0.9989;RSQ=0.9933;ERATE=0.0004;THETA=0.0002;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 227349667 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8156;AVGPOST=0.9994;RSQ=0.9983;ERATE=0.0003;THETA=0.0002;AC=1782;AN=2184 GT:DS:GL:BD 0.81593406 1
1 227349789 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0028;AVGPOST=0.9974;RSQ=0.6148;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227349924 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.626;LDAF=0.0040;AVGPOST=0.9948;RSQ=0.4977;ERATE=0.0005;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227350004 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5347;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227350074 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6493;AVGPOST=0.9988;RSQ=0.9976;ERATE=0.0004;THETA=0.0004;AC=1418;AN=2184 GT:DS:GL:BD 0.64926738 1
1 227350100 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2237;AVGPOST=0.9976;RSQ=0.9945;ERATE=0.0004;THETA=0.0003;AC=488;AN=2184 GT:DS:GL:BD 0.22344323 0
1 227350120 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=1.0000;RSQ=0.9957;ERATE=0.0002;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227350121 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.963;LDAF=0.9778;AVGPOST=0.9984;RSQ=0.9688;ERATE=0.0004;THETA=0.0005;AC=2136;AN=2184 GT:DS:GL:BD 0.97802198 1
1 227350170 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0391;AVGPOST=0.9995;RSQ=0.9947;ERATE=0.0004;THETA=0.0004;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 227350186 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227350198 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0332;AVGPOST=0.9989;RSQ=0.9860;ERATE=0.0003;THETA=0.0005;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 227350201 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6228;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227350205 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0002;THETA=0.0059;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227350414 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1291;AVGPOST=0.9975;RSQ=0.9925;ERATE=0.0003;THETA=0.0009;AC=281;AN=2184 GT:DS:GL:BD 0.12866300 0
1 227350486 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.674;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8724;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227350545 . AAAAAT A 8822 PASS INDEL;BAVGPOST=0.977;BRSQ=0.894;LDAF=0.1129;AVGPOST=0.9769;RSQ=0.9230;ERATE=0.0012;THETA=0.0003;AC=246;AN=2184 GT:DS:GL:BD 0.11263736 0
1 227350555 . TA T 1116 PASS INDEL;BAVGPOST=0.965;BRSQ=0.827;LDAF=0.1029;AVGPOST=0.9768;RSQ=0.9142;ERATE=0.0006;THETA=0.0029;AC=229;AN=2184 GT:DS:GL:BD 0.10485348 0
1 227350615 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.928;BRSQ=0.840;LDAF=0.5610;AVGPOST=0.8897;RSQ=0.8071;ERATE=0.0542;THETA=0.0011;AC=1249;AN=2184 GT:DS:GL:BD 0.57188642 1
1 227350667 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.528;LDAF=0.0373;AVGPOST=0.9663;RSQ=0.6517;ERATE=0.0037;THETA=0.0011;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 227350746 rs67483735 CAT C 9514 PASS INDEL;BAVGPOST=0.945;BRSQ=0.770;LDAF=0.1679;AVGPOST=0.9058;RSQ=0.7201;ERATE=0.0259;THETA=0.0002;AC=308;AN=2184 GT:DS:GL:BD 0.14102565 0
1 227350808 . T TAA 5572 PASS INDEL;BAVGPOST=0.920;BRSQ=0.641;LDAF=0.1378;AVGPOST=0.8973;RSQ=0.6840;ERATE=0.0113;THETA=0.0028;AC=244;AN=2184 GT:DS:GL:BD 0.11172161 0
1 227350811 rs66950416 ATGTG A 32737 PASS INDEL;BAVGPOST=0.925;BRSQ=0.858;LDAF=0.4658;AVGPOST=0.8836;RSQ=0.8257;ERATE=0.0232;THETA=0.0001;AC=1016;AN=2184 GT:DS:GL:BD 0.46520147 0
1 227350825 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.888;LDAF=0.0773;AVGPOST=0.9903;RSQ=0.9467;ERATE=0.0006;THETA=0.0009;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 227350830 . CAT C 423 PASS INDEL;BAVGPOST=0.983;BRSQ=0.695;LDAF=0.0359;AVGPOST=0.9746;RSQ=0.7195;ERATE=0.0018;THETA=0.0007;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 227350841 rs71180704 GTA G 48772 PASS INDEL;BAVGPOST=0.962;BRSQ=0.916;LDAF=0.6273;AVGPOST=0.9019;RSQ=0.8350;ERATE=0.0268;THETA=0.0004;AC=1402;AN=2184 GT:DS:GL:BD 0.64194137 1
1 227350863 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.911;LDAF=0.0340;AVGPOST=0.9948;RSQ=0.9493;ERATE=0.0003;THETA=0.0005;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 227350865 . GTA G 599 PASS INDEL;BAVGPOST=0.982;BRSQ=0.681;LDAF=0.0490;AVGPOST=0.9453;RSQ=0.5404;ERATE=0.0104;THETA=0.0064;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 227350871 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.5910;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227350909 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.712;LDAF=0.0457;AVGPOST=0.9592;RSQ=0.6613;ERATE=0.0088;THETA=0.0015;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 227351163 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0701;AVGPOST=0.9996;RSQ=0.9974;ERATE=0.0003;THETA=0.0003;AC=153;AN=2184 GT:DS:GL:BD 0.07005495 0
1 227351180 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8155;AVGPOST=0.9981;RSQ=0.9951;ERATE=0.0003;THETA=0.0005;AC=1782;AN=2184 GT:DS:GL:BD 0.81593406 1
1 227351211 . T TC 13689 PASS INDEL;BAVGPOST=0.913;BRSQ=0.799;LDAF=0.6836;AVGPOST=0.8179;RSQ=0.6805;ERATE=0.0561;THETA=0.0011;AC=1568;AN=2184 GT:DS:GL:BD 0.71794873 1
1 227351212 rs67562567 C CT 73898 PASS INDEL;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8153;AVGPOST=0.9978;RSQ=0.9942;ERATE=0.0005;THETA=0.0003;AC=1782;AN=2184 GT:DS:GL:BD 0.81593406 1
1 227351236 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.971;LDAF=0.0646;AVGPOST=0.9996;RSQ=0.9972;ERATE=0.0003;THETA=0.0008;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 227351267 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0020;AVGPOST=0.9972;RSQ=0.4805;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227351268 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8079;ERATE=0.0003;THETA=0.0026;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227351287 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.6507;AVGPOST=0.9954;RSQ=0.9919;ERATE=0.0007;THETA=0.0002;AC=1422;AN=2184 GT:DS:GL:BD 0.65109891 1
1 227351305 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.989;LDAF=0.2270;AVGPOST=0.9963;RSQ=0.9906;ERATE=0.0003;THETA=0.0016;AC=495;AN=2184 GT:DS:GL:BD 0.22664835 0
1 227351345 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0087;AVGPOST=0.9968;RSQ=0.8676;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 227351442 . AAAT A 24398 PASS INDEL;BAVGPOST=0.857;BRSQ=0.563;LDAF=0.7812;AVGPOST=0.8276;RSQ=0.5919;ERATE=0.0177;THETA=0.0003;AC=1748;AN=2184 GT:DS:GL:BD 0.80036628 1
1 227351444 rs58977807 AT A 41033 PASS INDEL;BAVGPOST=0.996;BRSQ=0.254;LDAF=0.9978;AVGPOST=0.9972;RSQ=0.4199;ERATE=0.0006;THETA=0.0002;AC=2182;AN=2184 GT:DS:GL:BD 0.99908423 1
1 227351453 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0105;AVGPOST=0.9888;RSQ=0.5850;ERATE=0.0008;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227351508 . ACAT A 428 PASS INDEL;BAVGPOST=0.996;BRSQ=0.663;LDAF=0.0086;AVGPOST=0.9943;RSQ=0.7435;ERATE=0.0010;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 227351602 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8185;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227351693 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8155;AVGPOST=0.9984;RSQ=0.9960;ERATE=0.0003;THETA=0.0005;AC=1782;AN=2184 GT:DS:GL:BD 0.81593406 1
1 227351712 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6515;AVGPOST=0.9939;RSQ=0.9889;ERATE=0.0009;THETA=0.0005;AC=1421;AN=2184 GT:DS:GL:BD 0.65064102 1
1 227351963 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7199;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227352059 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8664;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227352071 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.5504;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227352118 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.850;LDAF=0.9881;AVGPOST=0.9972;RSQ=0.9119;ERATE=0.0002;THETA=0.0003;AC=2158;AN=2184 GT:DS:GL:BD 0.98809522 1
1 227352165 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.6521;AVGPOST=0.9973;RSQ=0.9948;ERATE=0.0005;THETA=0.0005;AC=1422;AN=2184 GT:DS:GL:BD 0.65109891 1
1 227352195 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0362;AVGPOST=0.9998;RSQ=0.9975;ERATE=0.0002;THETA=0.0007;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 227352197 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.6877;ERATE=0.0003;THETA=0.0027;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227352203 . T TA 18 PASS INDEL;BAVGPOST=0.995;BRSQ=0.442;LDAF=0.0073;AVGPOST=0.9914;RSQ=0.5259;ERATE=0.0016;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227352289 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.920;LDAF=0.0646;AVGPOST=0.9994;RSQ=0.9951;ERATE=0.0002;THETA=0.0010;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 227352417 . GCA G 7246 PASS INDEL;BAVGPOST=0.986;BRSQ=0.925;LDAF=0.1131;AVGPOST=0.9572;RSQ=0.8391;ERATE=0.0093;THETA=0.0009;AC=225;AN=2184 GT:DS:GL:BD 0.10302198 0
1 227352422 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0115;AVGPOST=0.9989;RSQ=0.9684;ERATE=0.0003;THETA=0.0018;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 227352462 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0706;AVGPOST=0.9989;RSQ=0.9928;ERATE=0.0002;THETA=0.0008;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 227352754 . A AC 22836 PASS INDEL;BAVGPOST=0.962;BRSQ=0.924;LDAF=0.6431;AVGPOST=0.9443;RSQ=0.9106;ERATE=0.0112;THETA=0.0021;AC=1413;AN=2184 GT:DS:GL:BD 0.64697802 1
1 227352755 rs5781475 C CA 89481 PASS INDEL;BAVGPOST=0.979;BRSQ=0.959;LDAF=0.6638;AVGPOST=0.9835;RSQ=0.9726;ERATE=0.0003;THETA=0.0011;AC=1449;AN=2184 GT:DS:GL:BD 0.66346157 1
1 227352756 . A AC 22590 PASS INDEL;BAVGPOST=0.974;BRSQ=0.947;LDAF=0.6503;AVGPOST=0.9562;RSQ=0.9299;ERATE=0.0069;THETA=0.0003;AC=1428;AN=2184 GT:DS:GL:BD 0.65384614 1
1 227352915 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7799;AVGPOST=0.9980;RSQ=0.9958;ERATE=0.0003;THETA=0.0019;AC=1703;AN=2184 GT:DS:GL:BD 0.77976191 1
1 227352930 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.8152;AVGPOST=0.9979;RSQ=0.9947;ERATE=0.0004;THETA=0.0006;AC=1782;AN=2184 GT:DS:GL:BD 0.81593406 1
1 227352975 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0056;AVGPOST=0.9996;RSQ=0.9742;ERATE=0.0003;THETA=0.0011;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227353085 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7391;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227353131 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8541;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227353139 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9763;ERATE=0.0002;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227353162 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0024;AVGPOST=0.9984;RSQ=0.7197;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227353163 . GACAA G 160 PASS INDEL;BAVGPOST=0.999;BRSQ=0.757;LDAF=0.0027;AVGPOST=0.9970;RSQ=0.4956;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227353165 rs71180705 C CA 23601 PASS INDEL;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.2269;AVGPOST=0.9923;RSQ=0.9823;ERATE=0.0010;THETA=0.0003;AC=493;AN=2184 GT:DS:GL:BD 0.22573259 0
1 227353288 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8741;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227353414 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7478;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227353432 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.733;LDAF=0.0017;AVGPOST=0.9973;RSQ=0.3919;ERATE=0.0006;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227353481 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0797;AVGPOST=0.9989;RSQ=0.9935;ERATE=0.0002;THETA=0.0008;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 227353558 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6596;ERATE=0.0003;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227353666 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0102;AVGPOST=0.9989;RSQ=0.9649;ERATE=0.0002;THETA=0.0076;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 227353712 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0595;AVGPOST=0.9999;RSQ=0.9994;ERATE=0.0002;THETA=0.0004;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 227353753 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0329;AVGPOST=0.9991;RSQ=0.9874;ERATE=0.0002;THETA=0.0003;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 227353797 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0017;AVGPOST=0.9995;RSQ=0.8944;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227353932 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0329;AVGPOST=0.9991;RSQ=0.9888;ERATE=0.0003;THETA=0.0003;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 227353960 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.846;LDAF=0.0159;AVGPOST=0.9946;RSQ=0.8742;ERATE=0.0003;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 227354001 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0348;AVGPOST=0.9972;RSQ=0.9691;ERATE=0.0005;THETA=0.0005;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 227354012 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.7091;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227354100 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5741;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227354129 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6116;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227354223 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.983;LDAF=0.6464;AVGPOST=0.9845;RSQ=0.9730;ERATE=0.0065;THETA=0.0007;AC=1412;AN=2184 GT:DS:GL:BD 0.64652014 1
1 227354238 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.920;LDAF=0.0128;AVGPOST=0.9988;RSQ=0.9580;ERATE=0.0002;THETA=0.0016;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 227354270 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.720;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6150;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227354370 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0125;AVGPOST=0.9968;RSQ=0.8850;ERATE=0.0021;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 227354375 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.875;LDAF=0.0141;AVGPOST=0.9955;RSQ=0.8693;ERATE=0.0003;THETA=0.0011;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 227354454 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0052;AVGPOST=0.9994;RSQ=0.9463;ERATE=0.0002;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227354535 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.980;LDAF=0.7274;AVGPOST=0.9948;RSQ=0.9906;ERATE=0.0003;THETA=0.0003;AC=1590;AN=2184 GT:DS:GL:BD 0.72802198 1
1 227354548 . C CT 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.754;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5545;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227354597 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.974;LDAF=0.0373;AVGPOST=0.9979;RSQ=0.9789;ERATE=0.0003;THETA=0.0001;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 227354670 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227354700 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5871;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227354716 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227354740 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.6108;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227354845 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0089;AVGPOST=0.9991;RSQ=0.9548;ERATE=0.0003;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 227354939 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0027;AVGPOST=0.9980;RSQ=0.6996;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227354940 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.733;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6742;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227355096 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7608;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227355262 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.967;LDAF=0.0846;AVGPOST=0.9966;RSQ=0.9824;ERATE=0.0005;THETA=0.0005;AC=184;AN=2184 GT:DS:GL:BD 0.08424909 0
1 227355355 . AG A 18082 PASS INDEL;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1510;AVGPOST=0.9971;RSQ=0.9902;ERATE=0.0004;THETA=0.0010;AC=328;AN=2184 GT:DS:GL:BD 0.15018316 0
1 227355398 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0686;AVGPOST=0.9972;RSQ=0.9859;ERATE=0.0003;THETA=0.0003;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 227355459 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0060;AVGPOST=0.9990;RSQ=0.9374;ERATE=0.0002;THETA=0.0027;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227355493 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6889;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227355545 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0329;AVGPOST=0.9989;RSQ=0.9881;ERATE=0.0003;THETA=0.0003;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 227355558 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0080;AVGPOST=0.9996;RSQ=0.9751;ERATE=0.0004;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227355648 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0104;AVGPOST=0.9953;RSQ=0.8273;ERATE=0.0005;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 227355680 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0037;AVGPOST=0.9995;RSQ=0.9435;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227355731 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.967;LDAF=0.6398;AVGPOST=0.9598;RSQ=0.9334;ERATE=0.0072;THETA=0.0003;AC=1412;AN=2184 GT:DS:GL:BD 0.64652014 1
1 227355819 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.703;LDAF=0.0045;AVGPOST=0.9976;RSQ=0.7944;ERATE=0.0005;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227355868 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.6508;AVGPOST=0.9972;RSQ=0.9947;ERATE=0.0007;THETA=0.0028;AC=1422;AN=2184 GT:DS:GL:BD 0.65109891 1
1 227355918 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5720;AVGPOST=0.9958;RSQ=0.9937;ERATE=0.0006;THETA=0.0005;AC=1249;AN=2184 GT:DS:GL:BD 0.57188642 1
1 227356194 . T TGG 242 PASS INDEL;BAVGPOST=0.931;BRSQ=0.319;LDAF=0.0846;AVGPOST=0.8940;RSQ=0.4872;ERATE=0.0068;THETA=0.0011;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 227356195 . G GGT 10834 PASS INDEL;BAVGPOST=0.952;BRSQ=0.896;LDAF=0.3133;AVGPOST=0.9561;RSQ=0.9265;ERATE=0.0012;THETA=0.0004;AC=691;AN=2184 GT:DS:GL:BD 0.31639194 0
1 227356199 . T TG 9513 PASS INDEL;BAVGPOST=0.953;BRSQ=0.896;LDAF=0.3077;AVGPOST=0.9612;RSQ=0.9354;ERATE=0.0006;THETA=0.0003;AC=684;AN=2184 GT:DS:GL:BD 0.31318682 0
1 227356200 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.946;BRSQ=0.861;LDAF=0.2864;AVGPOST=0.9100;RSQ=0.8288;ERATE=0.0140;THETA=0.0012;AC=612;AN=2184 GT:DS:GL:BD 0.28021979 0
1 227356203 . T TG 81 PASS INDEL;BAVGPOST=0.935;BRSQ=0.554;LDAF=0.0850;AVGPOST=0.9585;RSQ=0.8080;ERATE=0.0006;THETA=0.0014;AC=185;AN=2184 GT:DS:GL:BD 0.08470696 0
1 227356210 . T TG 658 PASS INDEL;BAVGPOST=0.940;BRSQ=0.626;LDAF=0.0818;AVGPOST=0.9636;RSQ=0.8316;ERATE=0.0012;THETA=0.0003;AC=167;AN=2184 GT:DS:GL:BD 0.07646520 0
1 227356353 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0168;AVGPOST=0.9979;RSQ=0.9398;ERATE=0.0006;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 227356400 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.929;LDAF=0.1270;AVGPOST=0.9935;RSQ=0.9765;ERATE=0.0008;THETA=0.0006;AC=278;AN=2184 GT:DS:GL:BD 0.12728938 0
1 227356433 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0085;AVGPOST=0.9944;RSQ=0.7416;ERATE=0.0009;THETA=0.0001;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 227356445 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.680;LDAF=0.0028;AVGPOST=0.9971;RSQ=0.5234;ERATE=0.0006;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227356493 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.6505;AVGPOST=0.9965;RSQ=0.9934;ERATE=0.0007;THETA=0.0007;AC=1422;AN=2184 GT:DS:GL:BD 0.65109891 1
1 227356598 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1304;AVGPOST=0.9989;RSQ=0.9959;ERATE=0.0002;THETA=0.0001;AC=285;AN=2184 GT:DS:GL:BD 0.13049451 0
1 227356635 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.6487;AVGPOST=0.9958;RSQ=0.9929;ERATE=0.0008;THETA=0.0003;AC=1418;AN=2184 GT:DS:GL:BD 0.64926738 1
1 227356688 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8259;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227356809 rs35180414 AG A 64985 PASS INDEL;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.6472;AVGPOST=0.9939;RSQ=0.9895;ERATE=0.0006;THETA=0.0003;AC=1417;AN=2184 GT:DS:GL:BD 0.64880955 1
1 227356925 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.980;LDAF=0.0846;AVGPOST=0.9967;RSQ=0.9815;ERATE=0.0003;THETA=0.0006;AC=184;AN=2184 GT:DS:GL:BD 0.08424909 0
1 227357055 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8155;AVGPOST=0.9990;RSQ=0.9973;ERATE=0.0003;THETA=0.0002;AC=1782;AN=2184 GT:DS:GL:BD 0.81593406 1
1 227357274 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7970;ERATE=0.0002;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227357468 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227357475 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1592;AVGPOST=0.9975;RSQ=0.9924;ERATE=0.0003;THETA=0.0003;AC=349;AN=2184 GT:DS:GL:BD 0.15979853 0
1 227357570 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1293;AVGPOST=0.9996;RSQ=0.9986;ERATE=0.0003;THETA=0.0013;AC=283;AN=2184 GT:DS:GL:BD 0.12957875 0
1 227357656 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9824;ERATE=0.0002;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227357657 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.7160;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227357765 . GA G 207 PASS INDEL;BAVGPOST=0.999;BRSQ=0.789;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8879;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227357784 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.975;LDAF=0.0361;AVGPOST=0.9996;RSQ=0.9951;ERATE=0.0003;THETA=0.0003;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 227357822 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227357884 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0086;AVGPOST=0.9997;RSQ=0.9863;ERATE=0.0002;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 227358168 rs72169578 G GA 742 PASS INDEL;BAVGPOST=0.946;BRSQ=0.637;LDAF=0.0888;AVGPOST=0.9223;RSQ=0.6565;ERATE=0.0151;THETA=0.0003;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 227358178 . ATTG A 200 PASS INDEL;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0036;AVGPOST=0.9984;RSQ=0.8322;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227358284 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.8957;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227358290 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.893;LDAF=0.0106;AVGPOST=0.9990;RSQ=0.9641;ERATE=0.0002;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 227358340 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9828;ERATE=0.0002;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227358371 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227358419 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0585;AVGPOST=0.9991;RSQ=0.9930;ERATE=0.0003;THETA=0.0002;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 227358442 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0325;AVGPOST=0.9995;RSQ=0.9935;ERATE=0.0002;THETA=0.0004;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 227358536 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.7043;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227358563 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0038;AVGPOST=0.9989;RSQ=0.8794;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227358587 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6746;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227358713 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.6177;ERATE=0.0003;THETA=0.0040;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227358837 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7847;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227358912 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1294;AVGPOST=0.9992;RSQ=0.9969;ERATE=0.0003;THETA=0.0003;AC=283;AN=2184 GT:DS:GL:BD 0.12957875 0
1 227359128 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.842;LDAF=0.0142;AVGPOST=0.9938;RSQ=0.8319;ERATE=0.0004;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 227359143 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0610;AVGPOST=0.9989;RSQ=0.9923;ERATE=0.0003;THETA=0.0002;AC=133;AN=2184 GT:DS:GL:BD 0.06089744 0
1 227359174 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.680;LDAF=0.0020;AVGPOST=0.9994;RSQ=0.8562;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227359197 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6553;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227359254 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6318;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227359256 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6256;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227359271 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8155;AVGPOST=0.9984;RSQ=0.9963;ERATE=0.0003;THETA=0.0005;AC=1781;AN=2184 GT:DS:GL:BD 0.81547618 1
1 227359341 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0796;AVGPOST=0.9982;RSQ=0.9900;ERATE=0.0003;THETA=0.0016;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 227359388 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227359412 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0158;AVGPOST=0.9990;RSQ=0.9736;ERATE=0.0003;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 227359434 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.656;LDAF=0.0029;AVGPOST=0.9988;RSQ=0.8218;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227359435 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6889;ERATE=0.0003;THETA=0.0050;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227359469 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.6136;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227359607 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0078;AVGPOST=0.9986;RSQ=0.9323;ERATE=0.0002;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227359725 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9245;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227359918 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0038;AVGPOST=0.9992;RSQ=0.9056;ERATE=0.0003;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227359922 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7836;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227359929 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0022;AVGPOST=0.9979;RSQ=0.5977;ERATE=0.0006;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227360041 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8259;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227360155 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227360259 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6471;AVGPOST=0.9970;RSQ=0.9948;ERATE=0.0005;THETA=0.0003;AC=1412;AN=2184 GT:DS:GL:BD 0.64652014 1
1 227360278 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5682;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227360295 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227360329 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227360333 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7860;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227360481 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0021;AVGPOST=0.9980;RSQ=0.6032;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227360634 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0156;AVGPOST=0.9997;RSQ=0.9916;ERATE=0.0002;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 227360735 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7651;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227360887 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0008;AVGPOST=0.9998;RSQ=0.8876;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227360914 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7475;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227360930 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9103;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227361072 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7791;AVGPOST=0.9984;RSQ=0.9965;ERATE=0.0004;THETA=0.0003;AC=1702;AN=2184 GT:DS:GL:BD 0.77930403 1
1 227361170 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0048;AVGPOST=0.9994;RSQ=0.9505;ERATE=0.0002;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227361227 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227361253 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1300;AVGPOST=0.9979;RSQ=0.9935;ERATE=0.0004;THETA=0.0004;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 227361281 . T TA 7895 PASS INDEL;BAVGPOST=0.977;BRSQ=0.882;LDAF=0.0951;AVGPOST=0.9914;RSQ=0.9616;ERATE=0.0004;THETA=0.0006;AC=208;AN=2184 GT:DS:GL:BD 0.09523810 0
1 227361299 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8158;AVGPOST=0.9984;RSQ=0.9961;ERATE=0.0003;THETA=0.0004;AC=1781;AN=2184 GT:DS:GL:BD 0.81547618 1
1 227361336 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0083;AVGPOST=0.9988;RSQ=0.9413;ERATE=0.0003;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 227361412 rs113378000 AT A 90 PASS INDEL;BAVGPOST=0.972;BRSQ=0.478;LDAF=0.0500;AVGPOST=0.9362;RSQ=0.4666;ERATE=0.0128;THETA=0.0010;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 227361528 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0795;AVGPOST=0.9992;RSQ=0.9952;ERATE=0.0002;THETA=0.0004;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 227361593 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5640;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227361603 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.821;LDAF=0.0193;AVGPOST=0.9952;RSQ=0.9002;ERATE=0.0003;THETA=0.0006;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 227361820 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.686;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5857;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227361869 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0081;AVGPOST=0.9990;RSQ=0.9469;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227362023 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0118;AVGPOST=0.9992;RSQ=0.9711;ERATE=0.0003;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227362081 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0078;AVGPOST=0.9973;RSQ=0.8837;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 227362191 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9186;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227362223 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227362421 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0059;AVGPOST=0.9989;RSQ=0.9310;ERATE=0.0003;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227362527 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.876;LDAF=0.0101;AVGPOST=0.9982;RSQ=0.9261;ERATE=0.0003;THETA=0.0007;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 227362540 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7712;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227362561 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9611;ERATE=0.0002;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227362603 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0015;AVGPOST=0.9993;RSQ=0.7926;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227362732 . ATT A 905 PASS INDEL;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0095;AVGPOST=0.9991;RSQ=0.9566;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 227362736 . ATTT A 1188 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0091;AVGPOST=0.9992;RSQ=0.9606;ERATE=0.0002;THETA=0.0008;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 227362898 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5855;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227363086 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0145;AVGPOST=0.9992;RSQ=0.9771;ERATE=0.0003;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 227363096 . G GT 188 PASS INDEL;BAVGPOST=0.999;BRSQ=0.871;LDAF=0.0046;AVGPOST=0.9984;RSQ=0.8360;ERATE=0.0005;THETA=0.0022;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227363135 . A AAT 1961 PASS INDEL;BAVGPOST=0.982;BRSQ=0.782;LDAF=0.0649;AVGPOST=0.9687;RSQ=0.7959;ERATE=0.0030;THETA=0.0024;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 227363181 . ATACTT A 4556 PASS INDEL;BAVGPOST=0.995;BRSQ=0.932;LDAF=0.0366;AVGPOST=0.9963;RSQ=0.9610;ERATE=0.0004;THETA=0.0004;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 227363230 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.835;LDAF=0.0034;AVGPOST=0.9990;RSQ=0.8709;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227363381 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0036;AVGPOST=0.9998;RSQ=0.9765;ERATE=0.0002;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227363433 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6495;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227363465 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0099;AVGPOST=0.9994;RSQ=0.9743;ERATE=0.0003;THETA=0.0010;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 227363467 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.5853;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227363517 . CA C 328 PASS INDEL;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0026;AVGPOST=0.9979;RSQ=0.6658;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227363604 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0604;AVGPOST=0.9985;RSQ=0.9921;ERATE=0.0002;THETA=0.0004;AC=131;AN=2184 GT:DS:GL:BD 0.05998169 0
1 227363605 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7335;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227363765 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.8091;AVGPOST=0.9915;RSQ=0.9805;ERATE=0.0013;THETA=0.0009;AC=1769;AN=2184 GT:DS:GL:BD 0.80998170 1
1 227363791 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7799;AVGPOST=0.9980;RSQ=0.9954;ERATE=0.0004;THETA=0.0007;AC=1703;AN=2184 GT:DS:GL:BD 0.77976191 1
1 227363819 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.870;LDAF=0.0046;AVGPOST=0.9987;RSQ=0.8978;ERATE=0.0002;THETA=0.0001;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227363822 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0068;AVGPOST=0.9980;RSQ=0.8881;ERATE=0.0002;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227363874 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0030;AVGPOST=0.9990;RSQ=0.8692;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227363904 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.864;LDAF=0.0050;AVGPOST=0.9993;RSQ=0.9343;ERATE=0.0002;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227363965 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1295;AVGPOST=0.9990;RSQ=0.9969;ERATE=0.0002;THETA=0.0008;AC=283;AN=2184 GT:DS:GL:BD 0.12957875 0
1 227363981 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6789;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227364041 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0036;AVGPOST=1.0000;RSQ=0.9940;ERATE=0.0002;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227364197 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.871;LDAF=0.0102;AVGPOST=0.9986;RSQ=0.9462;ERATE=0.0002;THETA=0.0001;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 227364318 . CTATT C 9737 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0700;AVGPOST=0.9992;RSQ=0.9942;ERATE=0.0004;THETA=0.0003;AC=153;AN=2184 GT:DS:GL:BD 0.07005495 0
1 227364335 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0032;AVGPOST=0.9971;RSQ=0.6644;ERATE=0.0002;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227364375 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.764;LDAF=0.0023;AVGPOST=0.9978;RSQ=0.6533;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227364490 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0082;AVGPOST=0.9993;RSQ=0.9594;ERATE=0.0003;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 227364491 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.898;LDAF=0.0188;AVGPOST=0.9969;RSQ=0.9417;ERATE=0.0004;THETA=0.0004;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 227364531 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7799;AVGPOST=0.9984;RSQ=0.9969;ERATE=0.0003;THETA=0.0006;AC=1703;AN=2184 GT:DS:GL:BD 0.77976191 1
1 227364561 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0031;AVGPOST=0.9994;RSQ=0.9046;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227364674 . CT C 85 PASS INDEL;BAVGPOST=0.969;BRSQ=0.378;LDAF=0.0662;AVGPOST=0.9069;RSQ=0.4146;ERATE=0.0135;THETA=0.0018;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 227364737 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.749;LDAF=0.0026;AVGPOST=0.9974;RSQ=0.6416;ERATE=0.0004;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227364739 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0073;AVGPOST=0.9989;RSQ=0.9423;ERATE=0.0003;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 227364751 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0018;AVGPOST=0.9995;RSQ=0.8645;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227364757 . ATACATT A 274 PASS INDEL;BAVGPOST=0.999;BRSQ=0.718;LDAF=0.0045;AVGPOST=0.9957;RSQ=0.5928;ERATE=0.0006;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227364783 . C CA 22821 PASS INDEL;BAVGPOST=0.986;BRSQ=0.961;LDAF=0.7763;AVGPOST=0.9920;RSQ=0.9827;ERATE=0.0008;THETA=0.0009;AC=1697;AN=2184 GT:DS:GL:BD 0.77701467 1
1 227364784 rs5781472 A AC 71822 PASS INDEL;BAVGPOST=0.988;BRSQ=0.966;LDAF=0.7778;AVGPOST=0.9933;RSQ=0.9844;ERATE=0.0003;THETA=0.0009;AC=1701;AN=2184 GT:DS:GL:BD 0.77884614 1
1 227364833 . A AT 272 PASS INDEL;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0092;AVGPOST=0.9951;RSQ=0.7784;ERATE=0.0006;THETA=0.0012;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 227364834 . AAAAAT A 6570 PASS INDEL;BAVGPOST=0.960;BRSQ=0.755;LDAF=0.1148;AVGPOST=0.9090;RSQ=0.6643;ERATE=0.0155;THETA=0.0006;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 227364835 . A AT 11076 PASS INDEL;BAVGPOST=0.942;BRSQ=0.836;LDAF=0.2331;AVGPOST=0.9277;RSQ=0.8411;ERATE=0.0100;THETA=0.0007;AC=486;AN=2184 GT:DS:GL:BD 0.22252747 0
1 227364836 . A AT 36 PASS INDEL;BAVGPOST=0.979;BRSQ=0.230;LDAF=0.0256;AVGPOST=0.9617;RSQ=0.4241;ERATE=0.0041;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 227364902 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0217;AVGPOST=0.9986;RSQ=0.9710;ERATE=0.0003;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 227364950 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7802;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227364998 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.749;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6930;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227365001 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0054;AVGPOST=0.9991;RSQ=0.9258;ERATE=0.0004;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227365040 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0327;AVGPOST=0.9994;RSQ=0.9911;ERATE=0.0003;THETA=0.0023;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 227365170 . A AT 40 PASS INDEL;BAVGPOST=0.986;BRSQ=0.375;LDAF=0.0234;AVGPOST=0.9692;RSQ=0.4975;ERATE=0.0035;THETA=0.0018;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 227365201 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.8176;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227365304 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.3307;AVGPOST=0.9972;RSQ=0.9948;ERATE=0.0008;THETA=0.0002;AC=722;AN=2184 GT:DS:GL:BD 0.33058608 0
1 227365330 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6481;AVGPOST=0.9969;RSQ=0.9939;ERATE=0.0009;THETA=0.0003;AC=1415;AN=2184 GT:DS:GL:BD 0.64789379 1
1 227365466 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6481;AVGPOST=0.9988;RSQ=0.9974;ERATE=0.0004;THETA=0.0006;AC=1415;AN=2184 GT:DS:GL:BD 0.64789379 1
1 227365468 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6522;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227365486 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7290;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227365511 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7109;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227365541 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7691;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227365641 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3309;AVGPOST=0.9977;RSQ=0.9953;ERATE=0.0007;THETA=0.0006;AC=722;AN=2184 GT:DS:GL:BD 0.33058608 0
1 227365649 . T TA 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4701;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227365758 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227365858 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8940;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227365922 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9993;RSQ=0.9176;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227365929 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7535;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227365986 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0039;AVGPOST=0.9992;RSQ=0.9170;ERATE=0.0002;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227366025 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4486;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227366083 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6351;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227366132 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8006;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227366146 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0085;AVGPOST=0.9994;RSQ=0.9677;ERATE=0.0002;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 227366147 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.894;LDAF=0.0107;AVGPOST=0.9968;RSQ=0.9053;ERATE=0.0003;THETA=0.0007;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 227366151 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.985;LDAF=0.1575;AVGPOST=0.9977;RSQ=0.9936;ERATE=0.0004;THETA=0.0009;AC=345;AN=2184 GT:DS:GL:BD 0.15796703 0
1 227366154 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.7217;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227366242 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.952;LDAF=0.7586;AVGPOST=0.9723;RSQ=0.9471;ERATE=0.0026;THETA=0.0005;AC=1663;AN=2184 GT:DS:GL:BD 0.76144689 1
1 227366285 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.8012;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227366289 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5324;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227366423 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6422;AVGPOST=0.9867;RSQ=0.9765;ERATE=0.0024;THETA=0.0009;AC=1407;AN=2184 GT:DS:GL:BD 0.64423078 1
1 227366551 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.838;LDAF=0.0063;AVGPOST=0.9988;RSQ=0.9228;ERATE=0.0004;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 227366616 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0115;AVGPOST=0.9999;RSQ=0.9946;ERATE=0.0002;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227366626 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1316;AVGPOST=0.9999;RSQ=0.9995;ERATE=0.0002;THETA=0.0006;AC=288;AN=2184 GT:DS:GL:BD 0.13186814 0
1 227366668 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7567;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227366691 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1319;AVGPOST=0.9995;RSQ=0.9987;ERATE=0.0002;THETA=0.0010;AC=288;AN=2184 GT:DS:GL:BD 0.13186814 0
1 227366708 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.890;LDAF=0.0071;AVGPOST=0.9979;RSQ=0.8988;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 227366734 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.869;LDAF=0.0087;AVGPOST=0.9995;RSQ=0.9755;ERATE=0.0002;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 227366784 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5669;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227366795 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8332;ERATE=0.0002;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227366912 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.6481;AVGPOST=0.9975;RSQ=0.9952;ERATE=0.0005;THETA=0.0004;AC=1415;AN=2184 GT:DS:GL:BD 0.64789379 1
1 227367040 rs78398595 CAAA C 14613 PASS INDEL;BAVGPOST=0.995;BRSQ=0.983;LDAF=0.1507;AVGPOST=0.9980;RSQ=0.9929;ERATE=0.0005;THETA=0.0004;AC=328;AN=2184 GT:DS:GL:BD 0.15018316 0
1 227367128 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.972;LDAF=0.0329;AVGPOST=0.9988;RSQ=0.9832;ERATE=0.0004;THETA=0.0005;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 227367336 rs72434840 CAAAAAAAA C 246 PASS INDEL;BAVGPOST=0.990;BRSQ=0.661;LDAF=0.0186;AVGPOST=0.9893;RSQ=0.7820;ERATE=0.0008;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 227367360 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0209;AVGPOST=0.9989;RSQ=0.9794;ERATE=0.0004;THETA=0.0004;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 227367403 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0101;AVGPOST=0.9983;RSQ=0.9374;ERATE=0.0003;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 227367454 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7794;AVGPOST=0.9988;RSQ=0.9970;ERATE=0.0003;THETA=0.0007;AC=1703;AN=2184 GT:DS:GL:BD 0.77976191 1
1 227367526 . CTATTAA C 20 PASS INDEL;BAVGPOST=0.999;BRSQ=0.747;LDAF=0.0031;AVGPOST=0.9956;RSQ=0.4341;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227367694 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.5379;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227367776 . AC A 159 PASS INDEL;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.5438;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227367834 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0081;AVGPOST=0.9972;RSQ=0.8808;ERATE=0.0003;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 227367901 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.6190;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227367902 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6583;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227367907 . A AAATC 1550 PASS INDEL;BAVGPOST=0.997;BRSQ=0.857;LDAF=0.0120;AVGPOST=0.9957;RSQ=0.8758;ERATE=0.0005;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 227367913 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7834;ERATE=0.0003;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227367933 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0390;AVGPOST=0.9995;RSQ=0.9954;ERATE=0.0002;THETA=0.0003;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 227367969 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0043;AVGPOST=0.9988;RSQ=0.8946;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227368110 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9149;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227368166 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0038;AVGPOST=0.9989;RSQ=0.9160;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227368245 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5839;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227368291 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.6658;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227368382 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0028;AVGPOST=0.9982;RSQ=0.7762;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227368456 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5711;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227368559 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7496;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227368666 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6505;AVGPOST=0.9988;RSQ=0.9976;ERATE=0.0002;THETA=0.0009;AC=1420;AN=2184 GT:DS:GL:BD 0.65018314 1
1 227368819 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.942;LDAF=0.0325;AVGPOST=0.9995;RSQ=0.9924;ERATE=0.0003;THETA=0.0003;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 227368905 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.8153;AVGPOST=0.9972;RSQ=0.9926;ERATE=0.0006;THETA=0.0003;AC=1783;AN=2184 GT:DS:GL:BD 0.81639194 1
1 227368973 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1588;AVGPOST=0.9974;RSQ=0.9924;ERATE=0.0003;THETA=0.0002;AC=348;AN=2184 GT:DS:GL:BD 0.15934066 0
1 227368987 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.837;LDAF=0.0133;AVGPOST=0.9950;RSQ=0.8776;ERATE=0.0003;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 227369002 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.725;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7544;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227369130 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1797;AVGPOST=0.9983;RSQ=0.9948;ERATE=0.0003;THETA=0.0004;AC=394;AN=2184 GT:DS:GL:BD 0.18040293 0
1 227369147 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4916;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227369186 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.377;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.5050;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227369226 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4704;ERATE=0.0003;THETA=0.0054;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227369312 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227369336 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0039;AVGPOST=0.9996;RSQ=0.9502;ERATE=0.0003;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227369346 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.655;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8338;ERATE=0.0002;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227369454 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5535;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227369539 . A AT 50 PASS INDEL;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227369631 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0721;AVGPOST=0.9996;RSQ=0.9972;ERATE=0.0003;THETA=0.0003;AC=158;AN=2184 GT:DS:GL:BD 0.07234433 0
1 227369685 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6480;AVGPOST=0.9983;RSQ=0.9970;ERATE=0.0004;THETA=0.0002;AC=1415;AN=2184 GT:DS:GL:BD 0.64789379 1
1 227369702 . ATG A 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6602;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227369754 . GT G 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.7383;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227369767 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.848;LDAF=0.0022;AVGPOST=0.9986;RSQ=0.7385;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227369831 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6474;AVGPOST=0.9985;RSQ=0.9976;ERATE=0.0003;THETA=0.0002;AC=1413;AN=2184 GT:DS:GL:BD 0.64697802 1
1 227369847 . C CT 300 PASS INDEL;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0033;AVGPOST=0.9984;RSQ=0.8004;ERATE=0.0003;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227370101 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9767;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227370287 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7425;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227370304 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.0043;AVGPOST=0.9988;RSQ=0.8945;ERATE=0.0004;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227370328 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0669;AVGPOST=0.9996;RSQ=0.9975;ERATE=0.0002;THETA=0.0006;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 227370469 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0021;AVGPOST=0.9983;RSQ=0.7413;ERATE=0.0003;THETA=0.0020;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227370470 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.629;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5970;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227370514 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6140;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227370564 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2277;AVGPOST=0.9966;RSQ=0.9926;ERATE=0.0004;THETA=0.0003;AC=495;AN=2184 GT:DS:GL:BD 0.22664835 0
1 227370578 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8159;AVGPOST=0.9984;RSQ=0.9964;ERATE=0.0003;THETA=0.0002;AC=1782;AN=2184 GT:DS:GL:BD 0.81593406 1
1 227370713 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.949;LDAF=0.0296;AVGPOST=0.9993;RSQ=0.9893;ERATE=0.0003;THETA=0.0007;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 227370753 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1317;AVGPOST=0.9995;RSQ=0.9979;ERATE=0.0003;THETA=0.0002;AC=288;AN=2184 GT:DS:GL:BD 0.13186814 0
1 227370823 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0363;AVGPOST=0.9995;RSQ=0.9939;ERATE=0.0003;THETA=0.0018;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 227371122 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7795;AVGPOST=0.9996;RSQ=0.9990;ERATE=0.0003;THETA=0.0007;AC=1703;AN=2184 GT:DS:GL:BD 0.77976191 1
1 227371256 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0661;AVGPOST=0.9991;RSQ=0.9939;ERATE=0.0003;THETA=0.0002;AC=144;AN=2184 GT:DS:GL:BD 0.06593407 0
1 227371329 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6401;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227371599 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6258;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227371606 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1311;AVGPOST=0.9988;RSQ=0.9967;ERATE=0.0002;THETA=0.0002;AC=288;AN=2184 GT:DS:GL:BD 0.13186814 0
1 227371637 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6485;AVGPOST=0.9987;RSQ=0.9975;ERATE=0.0004;THETA=0.0005;AC=1415;AN=2184 GT:DS:GL:BD 0.64789379 1
1 227371666 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0023;AVGPOST=0.9982;RSQ=0.6971;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227371813 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4391;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227371906 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2207;AVGPOST=0.9979;RSQ=0.9947;ERATE=0.0005;THETA=0.0002;AC=481;AN=2184 GT:DS:GL:BD 0.22023809 0
1 227371913 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.594;LDAF=0.0027;AVGPOST=0.9973;RSQ=0.6464;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227371927 . AT A 182 PASS INDEL;BAVGPOST=0.996;BRSQ=0.559;LDAF=0.0043;AVGPOST=0.9969;RSQ=0.7051;ERATE=0.0007;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227372002 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.707;LDAF=0.0026;AVGPOST=0.9980;RSQ=0.6799;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227372011 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6516;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227372092 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.476;LDAF=0.0045;AVGPOST=0.9946;RSQ=0.5697;ERATE=0.0005;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227372173 . AT A 6121 PASS INDEL;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0399;AVGPOST=0.9986;RSQ=0.9879;ERATE=0.0003;THETA=0.0003;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 227372238 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7384;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227372307 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5126;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227372424 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.809;LDAF=0.0175;AVGPOST=0.9958;RSQ=0.9027;ERATE=0.0004;THETA=0.0004;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 227372436 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9666;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227372450 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0390;AVGPOST=0.9993;RSQ=0.9929;ERATE=0.0002;THETA=0.0005;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 227372471 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.2290;AVGPOST=0.9963;RSQ=0.9917;ERATE=0.0009;THETA=0.0015;AC=497;AN=2184 GT:DS:GL:BD 0.22756410 0
1 227372492 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1308;AVGPOST=0.9980;RSQ=0.9940;ERATE=0.0004;THETA=0.0002;AC=286;AN=2184 GT:DS:GL:BD 0.13095239 0
1 227372513 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5800;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227372594 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5467;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227372864 . T TA 68 PASS INDEL;BAVGPOST=0.978;BRSQ=0.330;LDAF=0.0224;AVGPOST=0.9677;RSQ=0.4581;ERATE=0.0023;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 227372903 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.986;LDAF=0.1654;AVGPOST=0.9981;RSQ=0.9939;ERATE=0.0005;THETA=0.0004;AC=361;AN=2184 GT:DS:GL:BD 0.16529304 0
1 227373009 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.762;LDAF=0.0061;AVGPOST=0.9976;RSQ=0.8284;ERATE=0.0003;THETA=0.0011;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227373101 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7117;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227373142 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.810;LDAF=0.0058;AVGPOST=0.9965;RSQ=0.7566;ERATE=0.0005;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227373199 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6819;ERATE=0.0003;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227373321 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0678;AVGPOST=0.9974;RSQ=0.9851;ERATE=0.0005;THETA=0.0002;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 227373371 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.8129;AVGPOST=0.9955;RSQ=0.9896;ERATE=0.0007;THETA=0.0004;AC=1780;AN=2184 GT:DS:GL:BD 0.81501830 1
1 227373416 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.604;LDAF=0.0027;AVGPOST=0.9967;RSQ=0.5699;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227373463 rs34717435 T TC 7330 PASS INDEL;BAVGPOST=0.715;BRSQ=0.533;LDAF=0.4193;AVGPOST=0.7299;RSQ=0.5671;ERATE=0.0634;THETA=0.0004;AC=914;AN=2184 GT:DS:GL:BD 0.41849816 0
1 227373508 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7798;AVGPOST=0.9981;RSQ=0.9962;ERATE=0.0004;THETA=0.0002;AC=1705;AN=2184 GT:DS:GL:BD 0.78067768 1
1 227373531 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227373713 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.765;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.6332;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227373726 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0158;AVGPOST=0.9994;RSQ=0.9859;ERATE=0.0002;THETA=0.0008;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 227373814 . CTG C 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0020;AVGPOST=0.9978;RSQ=0.6059;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227373967 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0041;AVGPOST=0.9986;RSQ=0.8633;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227374141 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7536;ERATE=0.0002;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227374196 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7896;ERATE=0.0003;THETA=0.0032;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227374302 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0660;AVGPOST=0.9992;RSQ=0.9949;ERATE=0.0003;THETA=0.0003;AC=144;AN=2184 GT:DS:GL:BD 0.06593407 0
1 227374357 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0362;AVGPOST=0.9997;RSQ=0.9964;ERATE=0.0003;THETA=0.0005;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 227374493 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8158;AVGPOST=0.9997;RSQ=0.9991;ERATE=0.0003;THETA=0.0002;AC=1782;AN=2184 GT:DS:GL:BD 0.81593406 1
1 227374553 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8227;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227374608 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9882;ERATE=0.0002;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227374675 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7303;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227374715 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0119;AVGPOST=0.9999;RSQ=0.9965;ERATE=0.0002;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 227374758 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.899;LDAF=0.0143;AVGPOST=0.9964;RSQ=0.9138;ERATE=0.0005;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 227374760 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1499;AVGPOST=0.9975;RSQ=0.9926;ERATE=0.0003;THETA=0.0005;AC=326;AN=2184 GT:DS:GL:BD 0.14926741 0
1 227374823 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7713;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227374872 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4912;AVGPOST=0.9982;RSQ=0.9971;ERATE=0.0005;THETA=0.0002;AC=1071;AN=2184 GT:DS:GL:BD 0.49038461 0
1 227374903 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8508;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227374913 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227374949 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2958;AVGPOST=0.9982;RSQ=0.9961;ERATE=0.0005;THETA=0.0011;AC=647;AN=2184 GT:DS:GL:BD 0.29624543 0
1 227374964 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.950;LDAF=0.0080;AVGPOST=0.9996;RSQ=0.9757;ERATE=0.0002;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227375103 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1723;AVGPOST=0.9984;RSQ=0.9946;ERATE=0.0004;THETA=0.0034;AC=376;AN=2184 GT:DS:GL:BD 0.17216118 0
1 227375140 . G GA 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5407;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227375172 . AAAGAG A 49 PASS INDEL;BAVGPOST=1.000;BRSQ=0.690;LDAF=0.0024;AVGPOST=0.9961;RSQ=0.3772;ERATE=0.0005;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227375181 . ACTG A 178 PASS INDEL;BAVGPOST=0.994;BRSQ=0.532;LDAF=0.0171;AVGPOST=0.9818;RSQ=0.5891;ERATE=0.0022;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 227375243 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7950;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227375260 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0387;AVGPOST=0.9985;RSQ=0.9855;ERATE=0.0003;THETA=0.0003;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 227375333 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.636;LDAF=0.0037;AVGPOST=0.9961;RSQ=0.5838;ERATE=0.0007;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227375339 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.930;LDAF=0.1466;AVGPOST=0.9906;RSQ=0.9710;ERATE=0.0005;THETA=0.0009;AC=325;AN=2184 GT:DS:GL:BD 0.14880952 0
1 227375353 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0077;AVGPOST=0.9980;RSQ=0.9085;ERATE=0.0004;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 227375379 rs57215559 CA C 8563 PASS INDEL;BAVGPOST=0.945;BRSQ=0.850;LDAF=0.7674;AVGPOST=0.9386;RSQ=0.8738;ERATE=0.0044;THETA=0.0004;AC=1694;AN=2184 GT:DS:GL:BD 0.77564102 1
1 227375381 . C CCCG 3218 PASS INDEL;BAVGPOST=0.776;BRSQ=0.596;LDAF=0.4048;AVGPOST=0.7638;RSQ=0.6256;ERATE=0.0213;THETA=0.0007;AC=867;AN=2184 GT:DS:GL:BD 0.39697802 0
1 227375391 rs57854182 A AC 841 PASS INDEL;BAVGPOST=0.914;BRSQ=0.439;LDAF=0.1152;AVGPOST=0.8810;RSQ=0.5457;ERATE=0.0088;THETA=0.0004;AC=181;AN=2184 GT:DS:GL:BD 0.08287546 0
1 227375500 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6966;ERATE=0.0005;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227375603 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.982;LDAF=0.2260;AVGPOST=0.9966;RSQ=0.9921;ERATE=0.0004;THETA=0.0003;AC=494;AN=2184 GT:DS:GL:BD 0.22619048 0
1 227375617 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0341;AVGPOST=0.9981;RSQ=0.9762;ERATE=0.0004;THETA=0.0004;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 227375791 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8756;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227375798 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5592;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227375887 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.833;LDAF=0.0018;AVGPOST=0.9999;RSQ=0.9762;ERATE=0.0002;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227375889 . AATT A 238 PASS INDEL;BAVGPOST=0.999;BRSQ=0.783;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.7075;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227376039 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.962;LDAF=0.3051;AVGPOST=0.9955;RSQ=0.9911;ERATE=0.0005;THETA=0.0005;AC=667;AN=2184 GT:DS:GL:BD 0.30540293 0
1 227376179 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.846;LDAF=0.0055;AVGPOST=0.9990;RSQ=0.9202;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227376193 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8782;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227376236 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0017;AVGPOST=0.9974;RSQ=0.5539;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227376308 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0805;AVGPOST=0.9991;RSQ=0.9953;ERATE=0.0002;THETA=0.0006;AC=176;AN=2184 GT:DS:GL:BD 0.08058608 0
1 227376400 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227376453 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.794;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8104;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227376515 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0156;AVGPOST=0.9999;RSQ=0.9976;ERATE=0.0002;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 227376578 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7089;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227376624 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.975;LDAF=0.0327;AVGPOST=0.9989;RSQ=0.9849;ERATE=0.0003;THETA=0.0004;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 227376637 . CGT C 34130 PASS INDEL;BAVGPOST=0.965;BRSQ=0.462;LDAF=0.9401;AVGPOST=0.9169;RSQ=0.4232;ERATE=0.0151;THETA=0.0004;AC=2118;AN=2184 GT:DS:GL:BD 0.96978021 1
1 227376779 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9268;ERATE=0.0002;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227376838 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9995;RSQ=0.9454;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227376847 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.719;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.7170;ERATE=0.0003;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227376980 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6802;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227377060 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.959;LDAF=0.0205;AVGPOST=0.9978;RSQ=0.9528;ERATE=0.0004;THETA=0.0004;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 227377062 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.772;LDAF=0.0035;AVGPOST=0.9979;RSQ=0.8061;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227377102 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6596;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227377121 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.792;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8216;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227377126 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7816;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227377314 . C CA 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8247;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227377387 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4710;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227377552 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8158;AVGPOST=0.9998;RSQ=0.9994;ERATE=0.0003;THETA=0.0004;AC=1782;AN=2184 GT:DS:GL:BD 0.81593406 1
1 227377558 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0118;AVGPOST=0.9993;RSQ=0.9749;ERATE=0.0003;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227377574 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0381;AVGPOST=0.9997;RSQ=0.9971;ERATE=0.0003;THETA=0.0003;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 227377699 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.3297;AVGPOST=0.9972;RSQ=0.9949;ERATE=0.0004;THETA=0.0005;AC=721;AN=2184 GT:DS:GL:BD 0.33012819 0
1 227377891 rs10547469 CAG C 16718 PASS INDEL;BAVGPOST=0.982;BRSQ=0.951;LDAF=0.2162;AVGPOST=0.9924;RSQ=0.9831;ERATE=0.0010;THETA=0.0005;AC=473;AN=2184 GT:DS:GL:BD 0.21657509 0
1 227377918 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6484;AVGPOST=0.9973;RSQ=0.9949;ERATE=0.0008;THETA=0.0002;AC=1417;AN=2184 GT:DS:GL:BD 0.64880955 1
1 227377993 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0097;AVGPOST=0.9989;RSQ=0.9562;ERATE=0.0003;THETA=0.0043;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 227378066 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0592;AVGPOST=0.9991;RSQ=0.9939;ERATE=0.0004;THETA=0.0002;AC=129;AN=2184 GT:DS:GL:BD 0.05906593 0
1 227378084 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6486;AVGPOST=0.9988;RSQ=0.9977;ERATE=0.0003;THETA=0.0004;AC=1417;AN=2184 GT:DS:GL:BD 0.64880955 1
1 227378119 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.6492;AVGPOST=0.9984;RSQ=0.9967;ERATE=0.0006;THETA=0.0027;AC=1417;AN=2184 GT:DS:GL:BD 0.64880955 1
1 227378136 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0115;AVGPOST=0.9998;RSQ=0.9917;ERATE=0.0002;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227378266 rs10611739 GATT G 86207 PASS INDEL;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.6505;AVGPOST=0.9963;RSQ=0.9934;ERATE=0.0006;THETA=0.0004;AC=1421;AN=2184 GT:DS:GL:BD 0.65064102 1
1 227378325 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1309;AVGPOST=0.9989;RSQ=0.9962;ERATE=0.0003;THETA=0.0004;AC=286;AN=2184 GT:DS:GL:BD 0.13095239 0
1 227378349 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9172;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227378570 . CAG C 105 PASS INDEL;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0024;AVGPOST=0.9972;RSQ=0.6244;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227378649 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1509;AVGPOST=0.9987;RSQ=0.9952;ERATE=0.0004;THETA=0.0006;AC=329;AN=2184 GT:DS:GL:BD 0.15064102 0
1 227378657 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6476;AVGPOST=0.9962;RSQ=0.9940;ERATE=0.0005;THETA=0.0006;AC=1414;AN=2184 GT:DS:GL:BD 0.64743590 1
1 227378842 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1528;AVGPOST=0.9957;RSQ=0.9864;ERATE=0.0009;THETA=0.0004;AC=332;AN=2184 GT:DS:GL:BD 0.15201466 0
1 227378856 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.550;LDAF=0.0038;AVGPOST=0.9967;RSQ=0.6587;ERATE=0.0006;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227378869 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5655;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227378943 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.602;LDAF=0.0207;AVGPOST=0.9819;RSQ=0.6583;ERATE=0.0047;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 227378983 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.6412;AVGPOST=0.9840;RSQ=0.9706;ERATE=0.0023;THETA=0.0004;AC=1410;AN=2184 GT:DS:GL:BD 0.64560437 1
1 227378994 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0172;AVGPOST=0.9974;RSQ=0.9541;ERATE=0.0004;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 227379042 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.473;LDAF=0.0047;AVGPOST=0.9950;RSQ=0.5683;ERATE=0.0006;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227379242 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6919;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227379243 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7041;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227379264 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5038;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227379283 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6485;AVGPOST=0.9984;RSQ=0.9973;ERATE=0.0003;THETA=0.0036;AC=1417;AN=2184 GT:DS:GL:BD 0.64880955 1
1 227379344 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6231;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227379394 . C CA 972 PASS INDEL;BAVGPOST=0.996;BRSQ=0.806;LDAF=0.0146;AVGPOST=0.9922;RSQ=0.7862;ERATE=0.0010;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 227379395 rs60137051 G GA 65045 PASS INDEL;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.6480;AVGPOST=0.9877;RSQ=0.9785;ERATE=0.0017;THETA=0.0005;AC=1418;AN=2184 GT:DS:GL:BD 0.64926738 1
1 227379396 . A AG 13262 PASS INDEL;BAVGPOST=0.926;BRSQ=0.848;LDAF=0.5739;AVGPOST=0.8653;RSQ=0.7850;ERATE=0.0437;THETA=0.0005;AC=1288;AN=2184 GT:DS:GL:BD 0.58974361 1
1 227379668 . A AT 5155 PASS INDEL;BAVGPOST=0.981;BRSQ=0.830;LDAF=0.0540;AVGPOST=0.9758;RSQ=0.8232;ERATE=0.0025;THETA=0.0010;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 227379769 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5926;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227379840 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6683;ERATE=0.0002;THETA=0.0040;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227380005 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0036;AVGPOST=1.0000;RSQ=0.9940;ERATE=0.0002;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227380013 . T TTC 48650 PASS INDEL;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.6492;AVGPOST=0.9958;RSQ=0.9926;ERATE=0.0005;THETA=0.0013;AC=1419;AN=2184 GT:DS:GL:BD 0.64972526 1
1 227380016 rs60099414 T TCA 109312 PASS INDEL;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.6491;AVGPOST=0.9952;RSQ=0.9920;ERATE=0.0005;THETA=0.0020;AC=1418;AN=2184 GT:DS:GL:BD 0.64926738 1
1 227380064 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227380066 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7089;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227380156 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=1.0000;RSQ=0.9941;ERATE=0.0002;THETA=0.0055;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227380239 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0380;AVGPOST=0.9999;RSQ=0.9990;ERATE=0.0002;THETA=0.0006;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 227380250 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4859;ERATE=0.0003;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227380472 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.7808;AVGPOST=0.9950;RSQ=0.9881;ERATE=0.0010;THETA=0.0001;AC=1705;AN=2184 GT:DS:GL:BD 0.78067768 1
1 227380490 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6508;AVGPOST=0.9949;RSQ=0.9903;ERATE=0.0007;THETA=0.0004;AC=1420;AN=2184 GT:DS:GL:BD 0.65018314 1
1 227380527 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6487;AVGPOST=0.9971;RSQ=0.9945;ERATE=0.0005;THETA=0.0007;AC=1417;AN=2184 GT:DS:GL:BD 0.64880955 1
1 227380664 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0117;AVGPOST=0.9994;RSQ=0.9766;ERATE=0.0003;THETA=0.0008;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227380666 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.748;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6006;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227380754 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.953;LDAF=0.6309;AVGPOST=0.9671;RSQ=0.9444;ERATE=0.0048;THETA=0.0004;AC=1396;AN=2184 GT:DS:GL:BD 0.63919413 1
1 227380788 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.821;BRSQ=0.634;LDAF=0.5221;AVGPOST=0.7380;RSQ=0.5223;ERATE=0.0695;THETA=0.0013;AC=1164;AN=2184 GT:DS:GL:BD 0.53296703 1
1 227380863 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.848;BRSQ=0.737;LDAF=0.5813;AVGPOST=0.9044;RSQ=0.8557;ERATE=0.0030;THETA=0.0006;AC=1312;AN=2184 GT:DS:GL:BD 0.60073262 1
1 227380864 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.849;BRSQ=0.739;LDAF=0.5581;AVGPOST=0.8429;RSQ=0.7612;ERATE=0.0106;THETA=0.0022;AC=1267;AN=2184 GT:DS:GL:BD 0.58012819 1
1 227380877 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.859;BRSQ=0.751;LDAF=0.5806;AVGPOST=0.9138;RSQ=0.8717;ERATE=0.0017;THETA=0.0003;AC=1302;AN=2184 GT:DS:GL:BD 0.59615386 1
1 227380935 . TA T 100 PASS INDEL;BAVGPOST=0.969;BRSQ=0.185;LDAF=0.0463;AVGPOST=0.9373;RSQ=0.4586;ERATE=0.0037;THETA=0.0005;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 227380937 rs71180711 AT A 6622 PASS INDEL;BAVGPOST=0.770;BRSQ=0.628;LDAF=0.5424;AVGPOST=0.8194;RSQ=0.7384;ERATE=0.0103;THETA=0.0003;AC=1236;AN=2184 GT:DS:GL:BD 0.56593406 1
1 227381056 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0690;AVGPOST=0.9983;RSQ=0.9891;ERATE=0.0005;THETA=0.0003;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 227381066 . C CT 36 PASS INDEL;BAVGPOST=0.991;BRSQ=0.498;LDAF=0.0204;AVGPOST=0.9721;RSQ=0.4767;ERATE=0.0046;THETA=0.0002;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 227381326 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6494;AVGPOST=0.9998;RSQ=0.9995;ERATE=0.0003;THETA=0.0003;AC=1418;AN=2184 GT:DS:GL:BD 0.64926738 1
1 227381362 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0585;AVGPOST=0.9999;RSQ=0.9993;ERATE=0.0002;THETA=0.0021;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 227381364 . A AT 1994 PASS INDEL;BAVGPOST=0.943;BRSQ=0.597;LDAF=0.1153;AVGPOST=0.8929;RSQ=0.5731;ERATE=0.0275;THETA=0.0004;AC=165;AN=2184 GT:DS:GL:BD 0.07554945 0
1 227381373 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.974;LDAF=0.6223;AVGPOST=0.9816;RSQ=0.9703;ERATE=0.0230;THETA=0.0003;AC=1367;AN=2184 GT:DS:GL:BD 0.62591577 1
1 227381428 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227381442 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0910;AVGPOST=1.0000;RSQ=0.9998;ERATE=0.0002;THETA=0.0002;AC=199;AN=2184 GT:DS:GL:BD 0.09111722 0
1 227381471 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0187;AVGPOST=0.9999;RSQ=0.9968;ERATE=0.0003;THETA=0.0001;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 227381480 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227381607 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227381644 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227381674 rs56305914 TA T 22463 PASS INDEL;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2250;AVGPOST=0.9911;RSQ=0.9803;ERATE=0.0026;THETA=0.0006;AC=487;AN=2184 GT:DS:GL:BD 0.22298534 0
1 227381754 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227381847 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6495;AVGPOST=0.9990;RSQ=0.9980;ERATE=0.0004;THETA=0.0036;AC=1418;AN=2184 GT:DS:GL:BD 0.64926738 1
1 227381953 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1638;AVGPOST=0.9992;RSQ=0.9978;ERATE=0.0002;THETA=0.0003;AC=359;AN=2184 GT:DS:GL:BD 0.16437729 0
1 227382124 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.674;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.7140;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227382171 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.890;LDAF=0.0064;AVGPOST=0.9979;RSQ=0.8771;ERATE=0.0003;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 227382297 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.828;LDAF=0.0028;AVGPOST=0.9979;RSQ=0.6942;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227382309 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7185;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227382462 . C CAA 264 PASS INDEL;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5517;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227382532 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6487;AVGPOST=0.9979;RSQ=0.9957;ERATE=0.0004;THETA=0.0007;AC=1417;AN=2184 GT:DS:GL:BD 0.64880955 1
1 227382533 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0029;AVGPOST=0.9987;RSQ=0.8318;ERATE=0.0004;THETA=0.0041;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227382613 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.2158;AVGPOST=0.9968;RSQ=0.9927;ERATE=0.0007;THETA=0.0004;AC=470;AN=2184 GT:DS:GL:BD 0.21520147 0
1 227382634 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.6492;AVGPOST=0.9981;RSQ=0.9963;ERATE=0.0004;THETA=0.0003;AC=1418;AN=2184 GT:DS:GL:BD 0.64926738 1
1 227382676 rs66460255 G GT 71271 PASS INDEL;BAVGPOST=0.994;BRSQ=0.987;LDAF=0.6496;AVGPOST=0.9964;RSQ=0.9930;ERATE=0.0008;THETA=0.0006;AC=1418;AN=2184 GT:DS:GL:BD 0.64926738 1
1 227382766 . CAT C 648 PASS INDEL;BAVGPOST=0.998;BRSQ=0.774;LDAF=0.0042;AVGPOST=0.9981;RSQ=0.8028;ERATE=0.0003;THETA=0.0023;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227382778 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5979;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227382825 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4684;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227382832 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8575;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227382835 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6533;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227382870 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.898;LDAF=0.0048;AVGPOST=0.9970;RSQ=0.7903;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227382879 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6359;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227383015 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8121;AVGPOST=0.9944;RSQ=0.9861;ERATE=0.0007;THETA=0.0004;AC=1776;AN=2184 GT:DS:GL:BD 0.81318682 1
1 227383076 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.719;LDAF=0.0025;AVGPOST=0.9973;RSQ=0.5440;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227383097 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.663;LDAF=0.0021;AVGPOST=0.9973;RSQ=0.5070;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227383119 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.6465;AVGPOST=0.9948;RSQ=0.9903;ERATE=0.0009;THETA=0.0005;AC=1414;AN=2184 GT:DS:GL:BD 0.64743590 1
1 227383130 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.6465;AVGPOST=0.9944;RSQ=0.9898;ERATE=0.0007;THETA=0.0061;AC=1416;AN=2184 GT:DS:GL:BD 0.64835167 1
1 227383157 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0367;AVGPOST=0.9985;RSQ=0.9819;ERATE=0.0003;THETA=0.0004;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 227383198 . TA T 18649 PASS INDEL;BAVGPOST=0.975;BRSQ=0.948;LDAF=0.6188;AVGPOST=0.9405;RSQ=0.9050;ERATE=0.0114;THETA=0.0002;AC=1369;AN=2184 GT:DS:GL:BD 0.62683153 1
1 227383199 rs35939803 AT A 66879 PASS INDEL;BAVGPOST=0.992;BRSQ=0.984;LDAF=0.6472;AVGPOST=0.9932;RSQ=0.9892;ERATE=0.0006;THETA=0.0006;AC=1413;AN=2184 GT:DS:GL:BD 0.64697802 1
1 227383257 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.787;LDAF=0.0050;AVGPOST=0.9983;RSQ=0.8648;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227383281 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.794;LDAF=0.0071;AVGPOST=0.9976;RSQ=0.8719;ERATE=0.0003;THETA=0.0009;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227383398 . A ATAT 20792 PASS INDEL;BAVGPOST=0.918;BRSQ=0.808;LDAF=0.7266;AVGPOST=0.8787;RSQ=0.7765;ERATE=0.0292;THETA=0.0009;AC=1641;AN=2184 GT:DS:GL:BD 0.75137365 1
1 227383404 rs72254271 T TTA 29881 PASS INDEL;BAVGPOST=0.930;BRSQ=0.830;LDAF=0.7558;AVGPOST=0.9154;RSQ=0.8337;ERATE=0.0130;THETA=0.0004;AC=1700;AN=2184 GT:DS:GL:BD 0.77838826 1
1 227383459 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.780;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.7879;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227383472 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.5896;ERATE=0.0004;THETA=0.0056;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227383555 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227383595 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6486;AVGPOST=0.9981;RSQ=0.9963;ERATE=0.0007;THETA=0.0004;AC=1417;AN=2184 GT:DS:GL:BD 0.64880955 1
1 227383641 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.764;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.9069;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227383664 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.6488;AVGPOST=0.9982;RSQ=0.9969;ERATE=0.0004;THETA=0.0005;AC=1417;AN=2184 GT:DS:GL:BD 0.64880955 1
1 227383703 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8156;ERATE=0.0007;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227383804 rs113835650 TA T 19148 PASS INDEL;BAVGPOST=0.721;BRSQ=0.573;LDAF=0.6019;AVGPOST=0.7654;RSQ=0.6693;ERATE=0.0245;THETA=0.0004;AC=1357;AN=2184 GT:DS:GL:BD 0.62133700 1
1 227383823 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6493;AVGPOST=0.9966;RSQ=0.9943;ERATE=0.0004;THETA=0.0005;AC=1418;AN=2184 GT:DS:GL:BD 0.64926738 1
1 227383889 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3488;AVGPOST=0.9988;RSQ=0.9976;ERATE=0.0004;THETA=0.0002;AC=762;AN=2184 GT:DS:GL:BD 0.34890109 0
1 227383893 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8276;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227384109 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0055;AVGPOST=0.9990;RSQ=0.9163;ERATE=0.0005;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227384207 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.968;LDAF=0.4973;AVGPOST=0.9639;RSQ=0.9466;ERATE=0.0029;THETA=0.0004;AC=1086;AN=2184 GT:DS:GL:BD 0.49725273 0
1 227384241 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.565;LDAF=0.0054;AVGPOST=0.9941;RSQ=0.5620;ERATE=0.0008;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227384283 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.530;LDAF=0.0166;AVGPOST=0.9862;RSQ=0.6784;ERATE=0.0010;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 227384286 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.966;LDAF=0.0381;AVGPOST=0.9906;RSQ=0.8975;ERATE=0.0012;THETA=0.0004;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 227384287 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.758;LDAF=0.0112;AVGPOST=0.9952;RSQ=0.8236;ERATE=0.0007;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 227384319 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.841;LDAF=0.0092;AVGPOST=0.9985;RSQ=0.9353;ERATE=0.0003;THETA=0.0014;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 227384320 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.905;LDAF=0.0093;AVGPOST=0.9973;RSQ=0.8704;ERATE=0.0006;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 227384369 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0079;AVGPOST=0.9986;RSQ=0.9200;ERATE=0.0005;THETA=0.0009;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 227384459 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3310;AVGPOST=0.9972;RSQ=0.9944;ERATE=0.0006;THETA=0.0004;AC=724;AN=2184 GT:DS:GL:BD 0.33150184 0
1 227384466 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5064;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227384604 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5306;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227384694 . CATA C 25 PASS INDEL;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6141;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227384727 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.642;LDAF=0.0065;AVGPOST=0.9973;RSQ=0.8459;ERATE=0.0003;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227384744 . CAAA C 406 PASS INDEL;BAVGPOST=0.996;BRSQ=0.631;LDAF=0.0038;AVGPOST=0.9973;RSQ=0.7117;ERATE=0.0003;THETA=0.0014;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227384781 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0002;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227384839 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.617;LDAF=0.9981;AVGPOST=0.9972;RSQ=0.4503;ERATE=0.0005;THETA=0.0003;AC=2182;AN=2184 GT:DS:GL:BD 0.99908423 1
1 227384887 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5324;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227384964 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.688;LDAF=0.0110;AVGPOST=0.9907;RSQ=0.6756;ERATE=0.0006;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 227384982 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7795;AVGPOST=0.9982;RSQ=0.9954;ERATE=0.0005;THETA=0.0004;AC=1703;AN=2184 GT:DS:GL:BD 0.77976191 1
1 227385066 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6933;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227385182 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0047;AVGPOST=0.9979;RSQ=0.8451;ERATE=0.0004;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227385244 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.650;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.6035;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227385291 rs34534815 C CT 4984 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0576;AVGPOST=0.9898;RSQ=0.9273;ERATE=0.0009;THETA=0.0003;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 227385371 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.824;LDAF=0.0048;AVGPOST=0.9981;RSQ=0.8345;ERATE=0.0004;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227385381 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.826;LDAF=0.0051;AVGPOST=0.9973;RSQ=0.7839;ERATE=0.0005;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227385390 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8155;AVGPOST=0.9975;RSQ=0.9938;ERATE=0.0005;THETA=0.0002;AC=1782;AN=2184 GT:DS:GL:BD 0.81593406 1
1 227385397 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0046;AVGPOST=0.9989;RSQ=0.8838;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227385441 . CA C 53 PASS INDEL;BAVGPOST=1.000;BRSQ=0.741;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.5506;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227385443 . CT C 56 PASS INDEL;BAVGPOST=0.999;BRSQ=0.502;LDAF=0.0056;AVGPOST=0.9937;RSQ=0.5707;ERATE=0.0009;THETA=0.0016;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227385444 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6467;AVGPOST=0.9930;RSQ=0.9874;ERATE=0.0011;THETA=0.0003;AC=1413;AN=2184 GT:DS:GL:BD 0.64697802 1
1 227385517 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0032;AVGPOST=0.9978;RSQ=0.7384;ERATE=0.0003;THETA=0.0055;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227385546 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8157;AVGPOST=0.9984;RSQ=0.9956;ERATE=0.0003;THETA=0.0007;AC=1782;AN=2184 GT:DS:GL:BD 0.81593406 1
1 227385560 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6492;AVGPOST=0.9972;RSQ=0.9943;ERATE=0.0006;THETA=0.0005;AC=1417;AN=2184 GT:DS:GL:BD 0.64880955 1
1 227385575 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0021;AVGPOST=0.9987;RSQ=0.7412;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227385822 . GA G 826 PASS INDEL;BAVGPOST=0.998;BRSQ=0.870;LDAF=0.0099;AVGPOST=0.9978;RSQ=0.9093;ERATE=0.0003;THETA=0.0007;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 227385851 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0023;AVGPOST=0.9984;RSQ=0.7194;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227386062 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0382;AVGPOST=0.9995;RSQ=0.9945;ERATE=0.0003;THETA=0.0007;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 227386104 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6489;AVGPOST=0.9972;RSQ=0.9954;ERATE=0.0005;THETA=0.0006;AC=1417;AN=2184 GT:DS:GL:BD 0.64880955 1
1 227386149 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.982;LDAF=0.0402;AVGPOST=0.9956;RSQ=0.9618;ERATE=0.0005;THETA=0.0003;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 227386159 rs61595730 G GA 11313 PASS INDEL;BAVGPOST=0.755;BRSQ=0.581;LDAF=0.4492;AVGPOST=0.7541;RSQ=0.6300;ERATE=0.0670;THETA=0.0004;AC=980;AN=2184 GT:DS:GL:BD 0.44871795 0
1 227386200 rs112241650 C CTTAA 109843 PASS INDEL;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.7678;AVGPOST=0.9711;RSQ=0.9456;ERATE=0.0045;THETA=0.0003;AC=1692;AN=2184 GT:DS:GL:BD 0.77472526 1
1 227386246 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0016;AVGPOST=0.9988;RSQ=0.7433;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227386271 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0598;AVGPOST=0.9982;RSQ=0.9891;ERATE=0.0003;THETA=0.0004;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 227386508 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0714;AVGPOST=0.9990;RSQ=0.9930;ERATE=0.0003;THETA=0.0004;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 227386552 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.970;LDAF=0.6422;AVGPOST=0.9795;RSQ=0.9644;ERATE=0.0040;THETA=0.0004;AC=1413;AN=2184 GT:DS:GL:BD 0.64697802 1
1 227386605 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.942;LDAF=0.6316;AVGPOST=0.9511;RSQ=0.9182;ERATE=0.0056;THETA=0.0005;AC=1405;AN=2184 GT:DS:GL:BD 0.64331502 1
1 227386650 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0025;AVGPOST=0.9975;RSQ=0.6031;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227386670 . C CA 225 PASS INDEL;BAVGPOST=0.996;BRSQ=0.693;LDAF=0.0069;AVGPOST=0.9973;RSQ=0.8452;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 227386760 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0116;AVGPOST=0.9995;RSQ=0.9818;ERATE=0.0002;THETA=0.0009;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227386795 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.776;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.6287;ERATE=0.0002;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227386971 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.959;LDAF=0.0274;AVGPOST=0.9986;RSQ=0.9808;ERATE=0.0003;THETA=0.0004;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 227386977 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227386982 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0381;AVGPOST=0.9997;RSQ=0.9965;ERATE=0.0003;THETA=0.0004;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 227387101 . A AG 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.704;LDAF=0.0039;AVGPOST=0.9981;RSQ=0.8055;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227387102 . G GA 92 PASS INDEL;BAVGPOST=0.989;BRSQ=0.598;LDAF=0.0295;AVGPOST=0.9640;RSQ=0.5273;ERATE=0.0069;THETA=0.0002;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 227387143 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6491;AVGPOST=0.9998;RSQ=0.9996;ERATE=0.0003;THETA=0.0004;AC=1417;AN=2184 GT:DS:GL:BD 0.64880955 1
1 227387209 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227387361 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7798;AVGPOST=0.9998;RSQ=0.9996;ERATE=0.0002;THETA=0.0007;AC=1703;AN=2184 GT:DS:GL:BD 0.77976191 1
1 227387562 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7293;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227387729 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6493;AVGPOST=0.9990;RSQ=0.9984;ERATE=0.0003;THETA=0.0008;AC=1417;AN=2184 GT:DS:GL:BD 0.64880955 1
1 227387776 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6467;AVGPOST=0.9968;RSQ=0.9946;ERATE=0.0005;THETA=0.0004;AC=1413;AN=2184 GT:DS:GL:BD 0.64697802 1
1 227387854 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.6327;AVGPOST=0.9843;RSQ=0.9729;ERATE=0.0032;THETA=0.0007;AC=1390;AN=2184 GT:DS:GL:BD 0.63644689 1
1 227387918 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.6445;AVGPOST=0.9925;RSQ=0.9876;ERATE=0.0010;THETA=0.0004;AC=1408;AN=2184 GT:DS:GL:BD 0.64468867 1
1 227387957 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.952;LDAF=0.7560;AVGPOST=0.9635;RSQ=0.9315;ERATE=0.0066;THETA=0.0010;AC=1670;AN=2184 GT:DS:GL:BD 0.76465201 1
1 227388069 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.600;LDAF=0.0054;AVGPOST=0.9967;RSQ=0.7676;ERATE=0.0007;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227388086 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.987;LDAF=0.6482;AVGPOST=0.9970;RSQ=0.9939;ERATE=0.0008;THETA=0.0005;AC=1417;AN=2184 GT:DS:GL:BD 0.64880955 1
1 227388108 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1321;AVGPOST=0.9970;RSQ=0.9910;ERATE=0.0004;THETA=0.0004;AC=288;AN=2184 GT:DS:GL:BD 0.13186814 0
1 227388124 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0039;AVGPOST=0.9991;RSQ=0.8971;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227388145 . AC A 20733 PASS INDEL;BAVGPOST=0.897;BRSQ=0.804;LDAF=0.5776;AVGPOST=0.8401;RSQ=0.7454;ERATE=0.0434;THETA=0.0003;AC=1307;AN=2184 GT:DS:GL:BD 0.59844321 1
1 227388147 . A AAC 4926 PASS INDEL;BAVGPOST=0.848;BRSQ=0.606;LDAF=0.2714;AVGPOST=0.8003;RSQ=0.5889;ERATE=0.0420;THETA=0.0004;AC=510;AN=2184 GT:DS:GL:BD 0.23351648 0
1 227388149 . A AC 244 PASS INDEL;BAVGPOST=0.994;BRSQ=0.617;LDAF=0.0098;AVGPOST=0.9929;RSQ=0.6988;ERATE=0.0010;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 227388206 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.825;LDAF=0.0172;AVGPOST=0.9989;RSQ=0.9703;ERATE=0.0003;THETA=0.0019;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 227388277 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6494;AVGPOST=0.9981;RSQ=0.9964;ERATE=0.0003;THETA=0.0005;AC=1417;AN=2184 GT:DS:GL:BD 0.64880955 1
1 227388323 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6497;AVGPOST=0.9981;RSQ=0.9962;ERATE=0.0005;THETA=0.0005;AC=1419;AN=2184 GT:DS:GL:BD 0.64972526 1
1 227388444 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6473;AVGPOST=0.9963;RSQ=0.9936;ERATE=0.0006;THETA=0.0002;AC=1415;AN=2184 GT:DS:GL:BD 0.64789379 1
1 227388607 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.733;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6791;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227388811 . A AT 21 PASS INDEL;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227388826 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0124;AVGPOST=0.9980;RSQ=0.9514;ERATE=0.0002;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227388856 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.944;LDAF=0.6306;AVGPOST=0.9533;RSQ=0.9238;ERATE=0.0119;THETA=0.0005;AC=1397;AN=2184 GT:DS:GL:BD 0.63965201 1
1 227388960 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1638;AVGPOST=0.9979;RSQ=0.9932;ERATE=0.0005;THETA=0.0007;AC=359;AN=2184 GT:DS:GL:BD 0.16437729 0
1 227388982 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.766;LDAF=0.0026;AVGPOST=0.9963;RSQ=0.4321;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227389062 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.737;LDAF=0.0027;AVGPOST=0.9988;RSQ=0.8202;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227389081 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6740;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227389303 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.877;LDAF=0.0052;AVGPOST=0.9989;RSQ=0.9229;ERATE=0.0002;THETA=0.0012;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227389517 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227389518 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8672;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227389522 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5779;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227389614 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0795;AVGPOST=0.9989;RSQ=0.9956;ERATE=0.0002;THETA=0.0004;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 227389640 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0363;AVGPOST=0.9995;RSQ=0.9927;ERATE=0.0003;THETA=0.0003;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 227389701 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8063;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227389775 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0028;AVGPOST=0.9997;RSQ=0.9456;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227389776 . CG C 86 PASS INDEL;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.6950;ERATE=0.0005;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227389810 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.972;LDAF=0.0669;AVGPOST=0.9982;RSQ=0.9887;ERATE=0.0003;THETA=0.0008;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 227389886 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.967;BRSQ=0.935;LDAF=0.6247;AVGPOST=0.9317;RSQ=0.8913;ERATE=0.0069;THETA=0.0004;AC=1394;AN=2184 GT:DS:GL:BD 0.63827837 1
1 227389887 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.529;LDAF=0.0096;AVGPOST=0.9915;RSQ=0.6657;ERATE=0.0008;THETA=0.0009;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 227389925 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.987;LDAF=0.1321;AVGPOST=0.9841;RSQ=0.9490;ERATE=0.0015;THETA=0.0004;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 227389934 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.947;BRSQ=0.898;LDAF=0.6173;AVGPOST=0.9164;RSQ=0.8736;ERATE=0.0095;THETA=0.0003;AC=1385;AN=2184 GT:DS:GL:BD 0.63415754 1
1 227389940 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.948;BRSQ=0.899;LDAF=0.6390;AVGPOST=0.9750;RSQ=0.9597;ERATE=0.0010;THETA=0.0010;AC=1409;AN=2184 GT:DS:GL:BD 0.64514655 1
1 227390063 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3370;AVGPOST=0.9973;RSQ=0.9953;ERATE=0.0006;THETA=0.0013;AC=737;AN=2184 GT:DS:GL:BD 0.33745420 0
1 227390087 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6543;AVGPOST=0.9982;RSQ=0.9966;ERATE=0.0003;THETA=0.0005;AC=1429;AN=2184 GT:DS:GL:BD 0.65430403 1
1 227390162 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3365;AVGPOST=0.9961;RSQ=0.9936;ERATE=0.0005;THETA=0.0023;AC=734;AN=2184 GT:DS:GL:BD 0.33608058 0
1 227390172 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.6543;AVGPOST=0.9977;RSQ=0.9956;ERATE=0.0004;THETA=0.0029;AC=1429;AN=2184 GT:DS:GL:BD 0.65430403 1
1 227390183 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0846;AVGPOST=0.9996;RSQ=0.9976;ERATE=0.0003;THETA=0.0003;AC=185;AN=2184 GT:DS:GL:BD 0.08470696 0
1 227390207 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0670;AVGPOST=0.9990;RSQ=0.9927;ERATE=0.0003;THETA=0.0015;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 227390298 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7670;AVGPOST=0.9971;RSQ=0.9939;ERATE=0.0006;THETA=0.0004;AC=1676;AN=2184 GT:DS:GL:BD 0.76739925 1
1 227390374 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2162;AVGPOST=0.9973;RSQ=0.9941;ERATE=0.0004;THETA=0.0002;AC=470;AN=2184 GT:DS:GL:BD 0.21520147 0
1 227390376 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6392;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227390448 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0589;AVGPOST=0.9987;RSQ=0.9913;ERATE=0.0003;THETA=0.0005;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 227390501 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1642;AVGPOST=0.9969;RSQ=0.9908;ERATE=0.0004;THETA=0.0005;AC=361;AN=2184 GT:DS:GL:BD 0.16529304 0
1 227390524 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0081;AVGPOST=0.9988;RSQ=0.9388;ERATE=0.0003;THETA=0.0039;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227390574 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5871;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227390580 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2267;AVGPOST=0.9962;RSQ=0.9914;ERATE=0.0006;THETA=0.0034;AC=494;AN=2184 GT:DS:GL:BD 0.22619048 0
1 227390612 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0049;AVGPOST=0.9990;RSQ=0.9219;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227390637 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6428;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227390659 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6548;AVGPOST=0.9985;RSQ=0.9969;ERATE=0.0005;THETA=0.0004;AC=1429;AN=2184 GT:DS:GL:BD 0.65430403 1
1 227390694 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6539;AVGPOST=0.9980;RSQ=0.9964;ERATE=0.0004;THETA=0.0005;AC=1429;AN=2184 GT:DS:GL:BD 0.65430403 1
1 227390820 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0966;AVGPOST=0.9990;RSQ=0.9953;ERATE=0.0003;THETA=0.0005;AC=211;AN=2184 GT:DS:GL:BD 0.09661172 0
1 227390836 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0325;AVGPOST=0.9994;RSQ=0.9915;ERATE=0.0003;THETA=0.0005;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 227390866 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7788;AVGPOST=0.9981;RSQ=0.9960;ERATE=0.0004;THETA=0.0005;AC=1702;AN=2184 GT:DS:GL:BD 0.77930403 1
1 227390883 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0150;AVGPOST=0.9999;RSQ=0.9970;ERATE=0.0002;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 227390907 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6526;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227391020 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7793;AVGPOST=0.9983;RSQ=0.9966;ERATE=0.0003;THETA=0.0003;AC=1703;AN=2184 GT:DS:GL:BD 0.77976191 1
1 227391272 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.631;LDAF=0.0033;AVGPOST=0.9968;RSQ=0.6379;ERATE=0.0007;THETA=0.0031;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227391313 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5992;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227391367 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.7947;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227391416 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7792;AVGPOST=0.9985;RSQ=0.9966;ERATE=0.0004;THETA=0.0002;AC=1703;AN=2184 GT:DS:GL:BD 0.77976191 1
1 227391436 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.976;LDAF=0.0585;AVGPOST=0.9993;RSQ=0.9948;ERATE=0.0004;THETA=0.0006;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 227391478 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.764;LDAF=0.0190;AVGPOST=0.9920;RSQ=0.8307;ERATE=0.0006;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 227391538 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6550;AVGPOST=0.9989;RSQ=0.9978;ERATE=0.0004;THETA=0.0006;AC=1430;AN=2184 GT:DS:GL:BD 0.65476191 1
1 227391564 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227391590 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7689;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227391602 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0017;AVGPOST=0.9995;RSQ=0.8671;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227391664 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6547;AVGPOST=0.9981;RSQ=0.9963;ERATE=0.0005;THETA=0.0005;AC=1430;AN=2184 GT:DS:GL:BD 0.65476191 1
1 227391709 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.986;LDAF=0.1236;AVGPOST=0.9976;RSQ=0.9920;ERATE=0.0003;THETA=0.0019;AC=270;AN=2184 GT:DS:GL:BD 0.12362637 0
1 227391874 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.6583;AVGPOST=0.9962;RSQ=0.9935;ERATE=0.0004;THETA=0.0005;AC=1436;AN=2184 GT:DS:GL:BD 0.65750915 1
1 227391890 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8422;ERATE=0.0002;THETA=0.0023;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227391938 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6545;AVGPOST=0.9983;RSQ=0.9965;ERATE=0.0006;THETA=0.0013;AC=1429;AN=2184 GT:DS:GL:BD 0.65430403 1
1 227392001 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.867;LDAF=0.0030;AVGPOST=0.9976;RSQ=0.7073;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227392010 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.907;LDAF=0.0085;AVGPOST=0.9978;RSQ=0.8961;ERATE=0.0003;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 227392046 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.760;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7657;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227392052 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6541;AVGPOST=0.9981;RSQ=0.9962;ERATE=0.0004;THETA=0.0003;AC=1429;AN=2184 GT:DS:GL:BD 0.65430403 1
1 227392150 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0115;AVGPOST=0.9998;RSQ=0.9913;ERATE=0.0002;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227392237 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9483;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227392374 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9583;ERATE=0.0002;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227392427 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7896;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227392568 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1256;AVGPOST=0.9980;RSQ=0.9938;ERATE=0.0005;THETA=0.0005;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 227392639 . T TA 4638 PASS INDEL;BAVGPOST=0.985;BRSQ=0.918;LDAF=0.1121;AVGPOST=0.9434;RSQ=0.7871;ERATE=0.0107;THETA=0.0022;AC=220;AN=2184 GT:DS:GL:BD 0.10073260 0
1 227392640 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.839;LDAF=0.0133;AVGPOST=0.9971;RSQ=0.9093;ERATE=0.0004;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 227392681 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.836;LDAF=0.0042;AVGPOST=0.9989;RSQ=0.8809;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227392729 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.962;LDAF=0.0841;AVGPOST=0.9975;RSQ=0.9863;ERATE=0.0003;THETA=0.0004;AC=184;AN=2184 GT:DS:GL:BD 0.08424909 0
1 227392770 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.494;LDAF=0.0248;AVGPOST=0.9722;RSQ=0.5920;ERATE=0.0039;THETA=0.0002;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 227392777 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.972;LDAF=0.0652;AVGPOST=0.9976;RSQ=0.9833;ERATE=0.0005;THETA=0.0003;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 227392817 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.667;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4161;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227392838 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.728;LDAF=0.0050;AVGPOST=0.9979;RSQ=0.8290;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227392883 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0022;AVGPOST=0.9988;RSQ=0.7643;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227392960 rs111767715 ACT A 20699 PASS INDEL;BAVGPOST=0.942;BRSQ=0.879;LDAF=0.6212;AVGPOST=0.8513;RSQ=0.7577;ERATE=0.0210;THETA=0.0006;AC=1420;AN=2184 GT:DS:GL:BD 0.65018314 1
1 227393006 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.923;BRSQ=0.833;LDAF=0.6319;AVGPOST=0.8260;RSQ=0.6936;ERATE=0.0441;THETA=0.0002;AC=1416;AN=2184 GT:DS:GL:BD 0.64835167 1
1 227393008 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.663;LDAF=0.0598;AVGPOST=0.9509;RSQ=0.6732;ERATE=0.0051;THETA=0.0030;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 227393018 . CACAG C 7844 PASS INDEL;BAVGPOST=0.979;BRSQ=0.890;LDAF=0.1143;AVGPOST=0.9810;RSQ=0.9277;ERATE=0.0019;THETA=0.0013;AC=250;AN=2184 GT:DS:GL:BD 0.11446887 0
1 227393022 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.963;BRSQ=0.833;LDAF=0.1134;AVGPOST=0.9836;RSQ=0.9393;ERATE=0.0010;THETA=0.0005;AC=251;AN=2184 GT:DS:GL:BD 0.11492674 0
1 227393091 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0334;AVGPOST=0.9981;RSQ=0.9745;ERATE=0.0005;THETA=0.0004;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 227393163 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0022;AVGPOST=0.9978;RSQ=0.6171;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227393223 . GA G 11 PASS INDEL;BAVGPOST=0.992;BRSQ=0.454;LDAF=0.0188;AVGPOST=0.9740;RSQ=0.4493;ERATE=0.0053;THETA=0.0007;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 227393225 rs35728390 CT C 49952 PASS INDEL;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.6529;AVGPOST=0.9962;RSQ=0.9929;ERATE=0.0007;THETA=0.0001;AC=1428;AN=2184 GT:DS:GL:BD 0.65384614 1
1 227393255 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7147;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227393256 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8455;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227393283 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0017;AVGPOST=0.9979;RSQ=0.5150;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227393322 . TAAC T 3115 PASS INDEL;BAVGPOST=0.998;BRSQ=0.966;LDAF=0.0155;AVGPOST=0.9961;RSQ=0.8912;ERATE=0.0008;THETA=0.0008;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 227393331 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9265;ERATE=0.0004;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227393492 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7432;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227393506 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.7093;AVGPOST=0.9914;RSQ=0.9840;ERATE=0.0012;THETA=0.0004;AC=1552;AN=2184 GT:DS:GL:BD 0.71062273 1
1 227393686 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.8140;AVGPOST=0.9958;RSQ=0.9898;ERATE=0.0010;THETA=0.0003;AC=1780;AN=2184 GT:DS:GL:BD 0.81501830 1
1 227393761 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0040;AVGPOST=0.9983;RSQ=0.8390;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227393914 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.834;LDAF=0.0039;AVGPOST=0.9989;RSQ=0.8792;ERATE=0.0003;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227393959 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1254;AVGPOST=0.9989;RSQ=0.9955;ERATE=0.0003;THETA=0.0009;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 227393984 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5670;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227394003 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8824;ERATE=0.0003;THETA=0.0042;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227394024 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0362;AVGPOST=0.9995;RSQ=0.9936;ERATE=0.0003;THETA=0.0003;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 227394084 . T TC 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6426;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227394125 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.898;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8816;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227394185 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8146;AVGPOST=0.9978;RSQ=0.9947;ERATE=0.0004;THETA=0.0005;AC=1780;AN=2184 GT:DS:GL:BD 0.81501830 1
1 227394412 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.5878;ERATE=0.0005;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227394472 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5179;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227394548 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.6535;AVGPOST=0.9964;RSQ=0.9934;ERATE=0.0006;THETA=0.0002;AC=1427;AN=2184 GT:DS:GL:BD 0.65338826 1
1 227394552 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227394628 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.984;LDAF=0.6521;AVGPOST=0.9909;RSQ=0.9843;ERATE=0.0014;THETA=0.0006;AC=1426;AN=2184 GT:DS:GL:BD 0.65293038 1
1 227394636 . TTTA T 1108 PASS INDEL;BAVGPOST=0.995;BRSQ=0.918;LDAF=0.0369;AVGPOST=0.9945;RSQ=0.9425;ERATE=0.0008;THETA=0.0002;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 227394788 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.697;LDAF=0.0271;AVGPOST=0.9807;RSQ=0.7340;ERATE=0.0007;THETA=0.0004;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 227394808 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.942;BRSQ=0.874;LDAF=0.3377;AVGPOST=0.9106;RSQ=0.8467;ERATE=0.0084;THETA=0.0003;AC=721;AN=2184 GT:DS:GL:BD 0.33012819 0
1 227394995 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0181;AVGPOST=0.9962;RSQ=0.9320;ERATE=0.0005;THETA=0.0002;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 227395001 . AT A 12 PASS INDEL;BAVGPOST=0.999;BRSQ=0.587;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5469;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227395068 . C CT 110 PASS INDEL;BAVGPOST=0.980;BRSQ=0.516;LDAF=0.0408;AVGPOST=0.9507;RSQ=0.5092;ERATE=0.0051;THETA=0.0003;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 227395074 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.945;LDAF=0.0363;AVGPOST=0.9973;RSQ=0.9729;ERATE=0.0003;THETA=0.0006;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 227395282 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.950;LDAF=0.3330;AVGPOST=0.9938;RSQ=0.9883;ERATE=0.0005;THETA=0.0012;AC=731;AN=2184 GT:DS:GL:BD 0.33470696 0
1 227395288 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.972;LDAF=0.6542;AVGPOST=0.9897;RSQ=0.9824;ERATE=0.0009;THETA=0.0002;AC=1426;AN=2184 GT:DS:GL:BD 0.65293038 1
1 227395327 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.655;LDAF=0.0033;AVGPOST=0.9972;RSQ=0.6235;ERATE=0.0007;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227395335 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0072;AVGPOST=0.9941;RSQ=0.6722;ERATE=0.0006;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227395967 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9346;ERATE=0.0002;THETA=0.0017;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227395987 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.6506;AVGPOST=0.9880;RSQ=0.9792;ERATE=0.0020;THETA=0.0015;AC=1422;AN=2184 GT:DS:GL:BD 0.65109891 1
1 227396529 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.922;LDAF=0.1753;AVGPOST=0.9885;RSQ=0.9735;ERATE=0.0007;THETA=0.0005;AC=387;AN=2184 GT:DS:GL:BD 0.17719780 0
1 227396563 . C CT 2471 PASS INDEL;BAVGPOST=0.996;BRSQ=0.956;LDAF=0.0368;AVGPOST=0.9956;RSQ=0.9510;ERATE=0.0007;THETA=0.0006;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 227397760 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.683;LDAF=0.0022;AVGPOST=0.9989;RSQ=0.7800;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227397821 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.825;LDAF=0.0163;AVGPOST=0.9963;RSQ=0.9078;ERATE=0.0005;THETA=0.0007;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 227397833 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.775;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4468;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227397927 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0397;AVGPOST=0.9979;RSQ=0.9793;ERATE=0.0004;THETA=0.0004;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 227397970 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6850;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227398072 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0036;AVGPOST=0.9997;RSQ=0.9617;ERATE=0.0002;THETA=0.0011;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227398110 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227398179 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1843;AVGPOST=0.9983;RSQ=0.9956;ERATE=0.0003;THETA=0.0003;AC=402;AN=2184 GT:DS:GL:BD 0.18406594 0
1 227398193 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6819;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227398288 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0839;AVGPOST=0.9970;RSQ=0.9860;ERATE=0.0003;THETA=0.0010;AC=183;AN=2184 GT:DS:GL:BD 0.08379121 0
1 227398320 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6318;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227398448 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0030;AVGPOST=0.9993;RSQ=0.9139;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227398558 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.972;LDAF=0.0672;AVGPOST=0.9989;RSQ=0.9942;ERATE=0.0003;THETA=0.0002;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 227398570 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.717;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8667;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227398597 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0380;AVGPOST=0.9996;RSQ=0.9955;ERATE=0.0002;THETA=0.0002;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 227398702 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.8196;AVGPOST=0.9967;RSQ=0.9911;ERATE=0.0003;THETA=0.0004;AC=1789;AN=2184 GT:DS:GL:BD 0.81913918 1
1 227399016 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227399017 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.830;LDAF=0.0004;AVGPOST=0.9992;RSQ=0.2141;ERATE=0.0003;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 227399081 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5790;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227399114 . GA G 114 PASS INDEL;BAVGPOST=0.998;BRSQ=0.364;LDAF=0.0024;AVGPOST=0.9976;RSQ=0.6251;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227399137 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9822;ERATE=0.0002;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227399152 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0157;AVGPOST=0.9996;RSQ=0.9891;ERATE=0.0003;THETA=0.0002;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 227399188 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2219;AVGPOST=0.9986;RSQ=0.9970;ERATE=0.0003;THETA=0.0006;AC=484;AN=2184 GT:DS:GL:BD 0.22161172 0
1 227399214 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3053;AVGPOST=0.9984;RSQ=0.9968;ERATE=0.0003;THETA=0.0008;AC=666;AN=2184 GT:DS:GL:BD 0.30494505 0
1 227399249 . A ATATG 309 PASS INDEL;BAVGPOST=0.999;BRSQ=0.796;LDAF=0.0020;AVGPOST=0.9978;RSQ=0.5539;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227399294 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0668;AVGPOST=0.9998;RSQ=0.9983;ERATE=0.0002;THETA=0.0003;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 227399381 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.770;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8374;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227399383 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.802;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6675;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227399479 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1254;AVGPOST=0.9993;RSQ=0.9970;ERATE=0.0003;THETA=0.0004;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 227399493 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3476;AVGPOST=0.9982;RSQ=0.9967;ERATE=0.0004;THETA=0.0003;AC=759;AN=2184 GT:DS:GL:BD 0.34752747 0
1 227399528 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0380;AVGPOST=0.9991;RSQ=0.9897;ERATE=0.0003;THETA=0.0004;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 227399587 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8414;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227399686 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7631;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227399797 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.962;BRSQ=0.920;LDAF=0.3367;AVGPOST=0.9282;RSQ=0.8773;ERATE=0.0268;THETA=0.0003;AC=718;AN=2184 GT:DS:GL:BD 0.32875457 0
1 227399806 . T TA 194 PASS INDEL;BAVGPOST=0.964;BRSQ=0.456;LDAF=0.0809;AVGPOST=0.9032;RSQ=0.4718;ERATE=0.0148;THETA=0.0005;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 227400053 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3487;AVGPOST=0.9967;RSQ=0.9943;ERATE=0.0006;THETA=0.0005;AC=762;AN=2184 GT:DS:GL:BD 0.34890109 0
1 227400074 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5290;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227400105 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.6983;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227400149 rs11326328 AC A 600 PASS INDEL;BAVGPOST=0.998;BRSQ=0.848;LDAF=0.0058;AVGPOST=0.9984;RSQ=0.9128;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227400245 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3488;AVGPOST=0.9948;RSQ=0.9911;ERATE=0.0008;THETA=0.0001;AC=761;AN=2184 GT:DS:GL:BD 0.34844321 0
1 227400264 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3475;AVGPOST=0.9987;RSQ=0.9973;ERATE=0.0005;THETA=0.0004;AC=759;AN=2184 GT:DS:GL:BD 0.34752747 0
1 227400348 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0591;AVGPOST=0.9989;RSQ=0.9946;ERATE=0.0002;THETA=0.0005;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 227400418 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2201;AVGPOST=0.9988;RSQ=0.9969;ERATE=0.0003;THETA=0.0004;AC=479;AN=2184 GT:DS:GL:BD 0.21932234 0
1 227400446 . G GC 79 PASS INDEL;BAVGPOST=1.000;BRSQ=0.737;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5636;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227400487 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9824;ERATE=0.0002;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227400548 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1851;AVGPOST=0.9986;RSQ=0.9969;ERATE=0.0003;THETA=0.0004;AC=403;AN=2184 GT:DS:GL:BD 0.18452381 0
1 227400578 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227400659 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0114;AVGPOST=1.0000;RSQ=0.9982;ERATE=0.0002;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227400792 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3467;AVGPOST=0.9990;RSQ=0.9985;ERATE=0.0002;THETA=0.0002;AC=758;AN=2184 GT:DS:GL:BD 0.34706959 0
1 227400794 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227401014 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227401072 rs112742802 GC G 23798 PASS INDEL;BAVGPOST=0.990;BRSQ=0.981;LDAF=0.3437;AVGPOST=0.9712;RSQ=0.9496;ERATE=0.0065;THETA=0.0002;AC=751;AN=2184 GT:DS:GL:BD 0.34386447 0
1 227401099 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7912;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227401117 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6332;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227401170 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2222;AVGPOST=0.9998;RSQ=0.9994;ERATE=0.0003;THETA=0.0002;AC=485;AN=2184 GT:DS:GL:BD 0.22206959 0
1 227401239 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7198;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227401471 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9535;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227401549 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6402;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227401582 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.835;LDAF=0.0020;AVGPOST=0.9980;RSQ=0.5881;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227401630 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227401647 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1187;AVGPOST=0.9985;RSQ=0.9947;ERATE=0.0003;THETA=0.0003;AC=260;AN=2184 GT:DS:GL:BD 0.11904762 0
1 227401787 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.3471;AVGPOST=0.9990;RSQ=0.9980;ERATE=0.0003;THETA=0.0007;AC=759;AN=2184 GT:DS:GL:BD 0.34752747 0
1 227401862 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0116;AVGPOST=0.9967;RSQ=0.8869;ERATE=0.0004;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 227401924 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.812;LDAF=0.0122;AVGPOST=0.9975;RSQ=0.9252;ERATE=0.0003;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 227401991 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9875;ERATE=0.0002;THETA=0.0001;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227402060 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1254;AVGPOST=0.9995;RSQ=0.9982;ERATE=0.0003;THETA=0.0002;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 227402082 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227402299 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3473;AVGPOST=0.9997;RSQ=0.9994;ERATE=0.0002;THETA=0.0004;AC=759;AN=2184 GT:DS:GL:BD 0.34752747 0
1 227402434 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0036;AVGPOST=0.9976;RSQ=0.7877;ERATE=0.0002;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227402529 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5018;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227402551 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0040;AVGPOST=0.9995;RSQ=0.9496;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227402577 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0965;AVGPOST=0.9993;RSQ=0.9968;ERATE=0.0003;THETA=0.0008;AC=211;AN=2184 GT:DS:GL:BD 0.09661172 0
1 227402583 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2191;AVGPOST=0.9994;RSQ=0.9984;ERATE=0.0003;THETA=0.0006;AC=477;AN=2184 GT:DS:GL:BD 0.21840659 0
1 227402690 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0020;AVGPOST=0.9993;RSQ=0.8798;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227402701 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9545;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227402791 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3474;AVGPOST=0.9989;RSQ=0.9978;ERATE=0.0005;THETA=0.0003;AC=759;AN=2184 GT:DS:GL:BD 0.34752747 0
1 227402837 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0380;AVGPOST=0.9999;RSQ=0.9990;ERATE=0.0002;THETA=0.0003;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 227402910 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0343;AVGPOST=0.9999;RSQ=0.9987;ERATE=0.0002;THETA=0.0006;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 227402923 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6340;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227402926 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6465;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227403145 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5683;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227403340 . A AT 90 PASS INDEL;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5749;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227403459 rs72253615 TTAAC T 15865 PASS INDEL;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1249;AVGPOST=0.9979;RSQ=0.9924;ERATE=0.0004;THETA=0.0004;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 227403503 . CT C 72 PASS INDEL;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0029;AVGPOST=0.9991;RSQ=0.8719;ERATE=0.0002;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227403537 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.3438;AVGPOST=0.9957;RSQ=0.9921;ERATE=0.0006;THETA=0.0005;AC=750;AN=2184 GT:DS:GL:BD 0.34340659 0
1 227403562 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0041;AVGPOST=0.9991;RSQ=0.9076;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227403602 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7623;ERATE=0.0003;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227403618 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227403715 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.587;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5614;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227403727 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6236;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227403750 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0048;AVGPOST=0.9987;RSQ=0.9063;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227403751 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0021;AVGPOST=0.9980;RSQ=0.6900;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227403813 . TTC T 435 PASS INDEL;BAVGPOST=0.993;BRSQ=0.727;LDAF=0.0236;AVGPOST=0.9858;RSQ=0.7746;ERATE=0.0013;THETA=0.0003;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 227403821 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.843;LDAF=0.0237;AVGPOST=0.9906;RSQ=0.8530;ERATE=0.0013;THETA=0.0004;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 227403823 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.941;BRSQ=0.882;LDAF=0.4261;AVGPOST=0.9043;RSQ=0.8529;ERATE=0.0429;THETA=0.0004;AC=908;AN=2184 GT:DS:GL:BD 0.41575092 0
1 227403830 . TATATAC T 13611 PASS INDEL;BAVGPOST=0.960;BRSQ=0.889;LDAF=0.2199;AVGPOST=0.9238;RSQ=0.8324;ERATE=0.0196;THETA=0.0003;AC=455;AN=2184 GT:DS:GL:BD 0.20833333 0
1 227403834 rs71840401 TAC T 17174 PASS INDEL;BAVGPOST=0.973;BRSQ=0.944;LDAF=0.3605;AVGPOST=0.9353;RSQ=0.8878;ERATE=0.0196;THETA=0.0003;AC=760;AN=2184 GT:DS:GL:BD 0.34798536 0
1 227403848 . CAT C 64 PASS INDEL;BAVGPOST=0.956;BRSQ=0.440;LDAF=0.0172;AVGPOST=0.9827;RSQ=0.6048;ERATE=0.0012;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 227403857 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.836;LDAF=0.0047;AVGPOST=0.9965;RSQ=0.7408;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227403925 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2222;AVGPOST=0.9989;RSQ=0.9973;ERATE=0.0003;THETA=0.0003;AC=485;AN=2184 GT:DS:GL:BD 0.22206959 0
1 227403979 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5518;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227404012 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0344;AVGPOST=0.9995;RSQ=0.9937;ERATE=0.0003;THETA=0.0007;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 227404082 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6635;AVGPOST=0.9990;RSQ=0.9980;ERATE=0.0003;THETA=0.0005;AC=1449;AN=2184 GT:DS:GL:BD 0.66346157 1
1 227404129 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227404174 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227404215 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0007;AVGPOST=0.9991;RSQ=0.4648;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227404345 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.644;LDAF=0.0018;AVGPOST=0.9980;RSQ=0.6398;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227404431 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6259;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227404507 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5921;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227404532 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0851;AVGPOST=0.9996;RSQ=0.9979;ERATE=0.0003;THETA=0.0004;AC=186;AN=2184 GT:DS:GL:BD 0.08516484 0
1 227404538 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6371;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227404565 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4905;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227404672 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6190;AVGPOST=0.9980;RSQ=0.9970;ERATE=0.0004;THETA=0.0004;AC=1351;AN=2184 GT:DS:GL:BD 0.61858976 1
1 227404677 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7337;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227404838 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0676;AVGPOST=0.9995;RSQ=0.9968;ERATE=0.0003;THETA=0.0002;AC=148;AN=2184 GT:DS:GL:BD 0.06776557 0
1 227405080 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1222;AVGPOST=0.9964;RSQ=0.9872;ERATE=0.0006;THETA=0.0002;AC=266;AN=2184 GT:DS:GL:BD 0.12179487 0
1 227405121 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.615;LDAF=0.0023;AVGPOST=0.9977;RSQ=0.5682;ERATE=0.0007;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227405148 rs34258602 C CA 11165 PASS INDEL;BAVGPOST=0.931;BRSQ=0.825;LDAF=0.2747;AVGPOST=0.8751;RSQ=0.7543;ERATE=0.0319;THETA=0.0004;AC=554;AN=2184 GT:DS:GL:BD 0.25366300 0
1 227405170 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.722;LDAF=0.0025;AVGPOST=0.9979;RSQ=0.6824;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227405251 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.3474;AVGPOST=0.9995;RSQ=0.9991;ERATE=0.0003;THETA=0.0004;AC=759;AN=2184 GT:DS:GL:BD 0.34752747 0
1 227405317 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9944;ERATE=0.0002;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227405394 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.6094;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227405435 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7822;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227405499 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=1.0000;RSQ=0.9972;ERATE=0.0002;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227405529 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8358;AVGPOST=0.9989;RSQ=0.9962;ERATE=0.0003;THETA=0.0002;AC=1825;AN=2184 GT:DS:GL:BD 0.83562273 1
1 227405615 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9628;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227405684 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7071;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227405686 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3479;AVGPOST=0.9988;RSQ=0.9982;ERATE=0.0003;THETA=0.0003;AC=759;AN=2184 GT:DS:GL:BD 0.34752747 0
1 227405804 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9442;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227405819 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0381;AVGPOST=0.9994;RSQ=0.9933;ERATE=0.0003;THETA=0.0003;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 227405833 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3473;AVGPOST=0.9993;RSQ=0.9985;ERATE=0.0004;THETA=0.0002;AC=759;AN=2184 GT:DS:GL:BD 0.34752747 0
1 227405940 rs10550606 CATCT C 11073 PASS INDEL;BAVGPOST=0.996;BRSQ=0.968;LDAF=0.0595;AVGPOST=0.9949;RSQ=0.9715;ERATE=0.0003;THETA=0.0006;AC=129;AN=2184 GT:DS:GL:BD 0.05906593 0
1 227405965 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0381;AVGPOST=0.9994;RSQ=0.9939;ERATE=0.0002;THETA=0.0003;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 227406079 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.914;LDAF=0.0114;AVGPOST=0.9964;RSQ=0.8952;ERATE=0.0002;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227406154 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.986;LDAF=0.0587;AVGPOST=0.9995;RSQ=0.9965;ERATE=0.0003;THETA=0.0003;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 227406189 . A AT 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0014;AVGPOST=0.9996;RSQ=0.8693;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227406223 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1257;AVGPOST=0.9991;RSQ=0.9966;ERATE=0.0003;THETA=0.0003;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 227406248 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.777;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9359;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227406365 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8309;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227406375 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0162;AVGPOST=0.9988;RSQ=0.9733;ERATE=0.0002;THETA=0.0002;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 227406433 . CAT C 36 PASS INDEL;BAVGPOST=1.000;BRSQ=0.744;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5672;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227406462 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6088;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227406509 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0036;AVGPOST=0.9981;RSQ=0.8053;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227406532 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5261;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227406684 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0129;AVGPOST=0.9996;RSQ=0.9883;ERATE=0.0003;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 227406767 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0343;AVGPOST=0.9999;RSQ=0.9981;ERATE=0.0002;THETA=0.0003;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 227406809 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2223;AVGPOST=0.9992;RSQ=0.9980;ERATE=0.0003;THETA=0.0004;AC=485;AN=2184 GT:DS:GL:BD 0.22206959 0
1 227406860 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9220;ERATE=0.0004;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227406883 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0787;AVGPOST=0.9995;RSQ=0.9969;ERATE=0.0002;THETA=0.0003;AC=172;AN=2184 GT:DS:GL:BD 0.07875458 0
1 227406908 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0386;AVGPOST=0.9994;RSQ=0.9921;ERATE=0.0003;THETA=0.0004;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 227406927 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9474;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227406935 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1253;AVGPOST=0.9998;RSQ=0.9991;ERATE=0.0002;THETA=0.0002;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 227407004 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9331;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227407105 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227407147 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.647;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6091;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227407261 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7523;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227407281 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2257;AVGPOST=0.9984;RSQ=0.9959;ERATE=0.0003;THETA=0.0003;AC=492;AN=2184 GT:DS:GL:BD 0.22527473 0
1 227407359 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.816;LDAF=0.0087;AVGPOST=0.9953;RSQ=0.8187;ERATE=0.0002;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 227407469 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0381;AVGPOST=0.9995;RSQ=0.9941;ERATE=0.0003;THETA=0.0002;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 227407477 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4719;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227407506 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.714;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7202;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227407651 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5281;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227407855 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.955;LDAF=0.0220;AVGPOST=0.9967;RSQ=0.9455;ERATE=0.0003;THETA=0.0005;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 227407985 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.902;BRSQ=0.698;LDAF=0.1993;AVGPOST=0.9059;RSQ=0.7744;ERATE=0.0073;THETA=0.0006;AC=418;AN=2184 GT:DS:GL:BD 0.19139194 0
1 227408077 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0682;AVGPOST=0.9968;RSQ=0.9793;ERATE=0.0005;THETA=0.0005;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 227408139 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1277;AVGPOST=0.9960;RSQ=0.9867;ERATE=0.0007;THETA=0.0007;AC=278;AN=2184 GT:DS:GL:BD 0.12728938 0
1 227408375 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5736;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227408378 rs60680228 T TC 33510 PASS INDEL;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.3497;AVGPOST=0.9945;RSQ=0.9914;ERATE=0.0006;THETA=0.0003;AC=762;AN=2184 GT:DS:GL:BD 0.34890109 0
1 227408465 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7089;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227408577 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8936;ERATE=0.0003;THETA=0.0022;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227408587 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0116;AVGPOST=0.9987;RSQ=0.9595;ERATE=0.0003;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227408696 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0326;AVGPOST=0.9996;RSQ=0.9948;ERATE=0.0002;THETA=0.0005;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 227408771 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227409065 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3546;AVGPOST=0.9942;RSQ=0.9896;ERATE=0.0008;THETA=0.0003;AC=771;AN=2184 GT:DS:GL:BD 0.35302198 0
1 227409072 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8504;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227409131 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5387;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227409556 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.833;LDAF=0.0027;AVGPOST=0.9977;RSQ=0.6916;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227409569 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0165;AVGPOST=0.9981;RSQ=0.9574;ERATE=0.0003;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 227409585 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.983;LDAF=0.1494;AVGPOST=0.9952;RSQ=0.9857;ERATE=0.0005;THETA=0.0005;AC=324;AN=2184 GT:DS:GL:BD 0.14835165 0
1 227409668 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.704;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4786;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227409735 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.5767;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227409811 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227409829 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4342;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227409863 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1256;AVGPOST=0.9988;RSQ=0.9956;ERATE=0.0005;THETA=0.0003;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 227409927 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0157;AVGPOST=0.9996;RSQ=0.9893;ERATE=0.0002;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 227409938 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.713;LDAF=0.0046;AVGPOST=0.9961;RSQ=0.6927;ERATE=0.0005;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227409966 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.786;LDAF=0.0222;AVGPOST=0.9941;RSQ=0.9143;ERATE=0.0004;THETA=0.0003;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 227410007 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1614;AVGPOST=0.9989;RSQ=0.9965;ERATE=0.0003;THETA=0.0007;AC=353;AN=2184 GT:DS:GL:BD 0.16163003 0
1 227410093 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0116;AVGPOST=0.9979;RSQ=0.9430;ERATE=0.0003;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 227410153 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4723;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227410186 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0296;AVGPOST=0.9992;RSQ=0.9887;ERATE=0.0003;THETA=0.0020;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 227410208 rs72209578 AAAC A 5853 PASS INDEL;BAVGPOST=0.996;BRSQ=0.960;LDAF=0.0376;AVGPOST=0.9944;RSQ=0.9488;ERATE=0.0006;THETA=0.0004;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 227410220 . C CA 9904 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0673;AVGPOST=0.9984;RSQ=0.9900;ERATE=0.0003;THETA=0.0003;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 227410223 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.945;LDAF=0.0878;AVGPOST=0.9965;RSQ=0.9836;ERATE=0.0003;THETA=0.0004;AC=192;AN=2184 GT:DS:GL:BD 0.08791209 0
1 227410267 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.3258;AVGPOST=0.9977;RSQ=0.9954;ERATE=0.0005;THETA=0.0006;AC=712;AN=2184 GT:DS:GL:BD 0.32600734 0
1 227410348 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8540;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227410408 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227410637 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.6630;AVGPOST=0.9969;RSQ=0.9943;ERATE=0.0009;THETA=0.0002;AC=1449;AN=2184 GT:DS:GL:BD 0.66346157 1
1 227410657 . G GA 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4497;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227410794 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7596;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227410822 . T TG 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.652;LDAF=0.0020;AVGPOST=0.9976;RSQ=0.6046;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227410827 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7648;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227410858 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9642;ERATE=0.0002;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227410880 . GA G 3115 PASS INDEL;BAVGPOST=0.993;BRSQ=0.978;LDAF=0.1812;AVGPOST=0.9955;RSQ=0.9893;ERATE=0.0004;THETA=0.0003;AC=396;AN=2184 GT:DS:GL:BD 0.18131869 0
1 227410885 rs78805148 AAGG A 34140 PASS INDEL;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1842;AVGPOST=0.9961;RSQ=0.9905;ERATE=0.0007;THETA=0.0007;AC=400;AN=2184 GT:DS:GL:BD 0.18315019 0
1 227410969 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.987;LDAF=0.8425;AVGPOST=0.9977;RSQ=0.9930;ERATE=0.0003;THETA=0.0002;AC=1838;AN=2184 GT:DS:GL:BD 0.84157509 1
1 227411003 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3455;AVGPOST=0.9995;RSQ=0.9991;ERATE=0.0003;THETA=0.0002;AC=755;AN=2184 GT:DS:GL:BD 0.34569597 0
1 227411016 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.8134;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227411141 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227411205 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227411207 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227411229 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0108;AVGPOST=0.9988;RSQ=0.9569;ERATE=0.0003;THETA=0.0008;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 227411325 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6377;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227411328 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0115;AVGPOST=0.9999;RSQ=0.9964;ERATE=0.0002;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227411392 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8526;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227411446 . A AT 1087 PASS INDEL;BAVGPOST=0.998;BRSQ=0.889;LDAF=0.0078;AVGPOST=0.9983;RSQ=0.9130;ERATE=0.0004;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227411477 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.958;LDAF=0.1072;AVGPOST=0.9962;RSQ=0.9843;ERATE=0.0005;THETA=0.0008;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 227411497 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0085;AVGPOST=0.9973;RSQ=0.8807;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227411509 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0065;AVGPOST=0.9998;RSQ=0.9831;ERATE=0.0002;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 227411656 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.766;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4898;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227411771 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0078;AVGPOST=0.9998;RSQ=0.9887;ERATE=0.0002;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227411805 . G GT 501 PASS INDEL;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227411807 . TTTTA T 85 PASS INDEL;BAVGPOST=0.999;BRSQ=0.792;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5775;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227411863 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.7849;AVGPOST=0.9986;RSQ=0.9968;ERATE=0.0003;THETA=0.0005;AC=1714;AN=2184 GT:DS:GL:BD 0.78479856 1
1 227412024 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.780;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.5972;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227412082 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2225;AVGPOST=0.9930;RSQ=0.9852;ERATE=0.0014;THETA=0.0003;AC=486;AN=2184 GT:DS:GL:BD 0.22252747 0
1 227412317 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0115;AVGPOST=0.9999;RSQ=0.9964;ERATE=0.0002;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227412365 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3456;AVGPOST=0.9983;RSQ=0.9967;ERATE=0.0006;THETA=0.0004;AC=755;AN=2184 GT:DS:GL:BD 0.34569597 0
1 227412449 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.768;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227412477 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.749;LDAF=0.0048;AVGPOST=0.9958;RSQ=0.6711;ERATE=0.0009;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227412570 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0058;AVGPOST=0.9968;RSQ=0.8055;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227412734 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0823;AVGPOST=0.9983;RSQ=0.9910;ERATE=0.0003;THETA=0.0003;AC=180;AN=2184 GT:DS:GL:BD 0.08241758 0
1 227412800 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.754;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6082;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227412830 . CTA C 50 PASS INDEL;BAVGPOST=1.000;BRSQ=0.720;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5855;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227412934 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0843;AVGPOST=0.9993;RSQ=0.9958;ERATE=0.0003;THETA=0.0005;AC=184;AN=2184 GT:DS:GL:BD 0.08424909 0
1 227412967 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5134;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227413051 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.825;LDAF=0.0073;AVGPOST=0.9969;RSQ=0.8629;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 227413068 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0053;AVGPOST=0.9966;RSQ=0.7529;ERATE=0.0007;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227413160 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1193;AVGPOST=0.9990;RSQ=0.9961;ERATE=0.0003;THETA=0.0003;AC=261;AN=2184 GT:DS:GL:BD 0.11950549 0
1 227413181 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5265;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227413192 . AT A 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.730;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.5290;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227413241 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8553;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227413264 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8367;AVGPOST=0.9967;RSQ=0.9908;ERATE=0.0005;THETA=0.0019;AC=1826;AN=2184 GT:DS:GL:BD 0.83608061 1
1 227413309 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0047;AVGPOST=0.9993;RSQ=0.9365;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227413318 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.771;LDAF=0.0019;AVGPOST=0.9994;RSQ=0.8600;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227413402 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6196;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227413438 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0325;AVGPOST=0.9998;RSQ=0.9967;ERATE=0.0003;THETA=0.0002;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 227413491 rs35530934 C CT 37055 PASS INDEL;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.3469;AVGPOST=0.9840;RSQ=0.9719;ERATE=0.0063;THETA=0.0018;AC=755;AN=2184 GT:DS:GL:BD 0.34569597 0
1 227413518 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0030;AVGPOST=0.9989;RSQ=0.8521;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227413751 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.905;LDAF=0.0088;AVGPOST=0.9981;RSQ=0.9124;ERATE=0.0004;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 227413996 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0668;AVGPOST=0.9996;RSQ=0.9970;ERATE=0.0003;THETA=0.0005;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 227414036 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3472;AVGPOST=0.9969;RSQ=0.9946;ERATE=0.0008;THETA=0.0004;AC=757;AN=2184 GT:DS:GL:BD 0.34661171 0
1 227414098 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7268;ERATE=0.0003;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227414110 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6384;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227414167 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.987;LDAF=0.0667;AVGPOST=0.9996;RSQ=0.9969;ERATE=0.0003;THETA=0.0003;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 227414176 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.987;LDAF=0.0668;AVGPOST=0.9995;RSQ=0.9967;ERATE=0.0003;THETA=0.0001;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 227414305 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.896;LDAF=0.0039;AVGPOST=0.9987;RSQ=0.8572;ERATE=0.0002;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227414581 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1192;AVGPOST=0.9994;RSQ=0.9974;ERATE=0.0003;THETA=0.0002;AC=261;AN=2184 GT:DS:GL:BD 0.11950549 0
1 227415073 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2204;AVGPOST=0.9982;RSQ=0.9960;ERATE=0.0006;THETA=0.0003;AC=481;AN=2184 GT:DS:GL:BD 0.22023809 0
1 227415201 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0669;AVGPOST=0.9994;RSQ=0.9956;ERATE=0.0003;THETA=0.0003;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 227415217 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.777;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227415273 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1254;AVGPOST=0.9997;RSQ=0.9987;ERATE=0.0003;THETA=0.0003;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 227415450 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3459;AVGPOST=0.9985;RSQ=0.9971;ERATE=0.0004;THETA=0.0029;AC=755;AN=2184 GT:DS:GL:BD 0.34569597 0
1 227415499 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.767;LDAF=0.0021;AVGPOST=0.9983;RSQ=0.6885;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227415562 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.6973;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227415576 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0064;AVGPOST=0.9975;RSQ=0.8557;ERATE=0.0004;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227415700 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227415745 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0043;AVGPOST=0.9987;RSQ=0.8769;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227415775 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0668;AVGPOST=0.9997;RSQ=0.9979;ERATE=0.0003;THETA=0.0003;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 227415780 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9310;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227415803 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0363;AVGPOST=0.9993;RSQ=0.9914;ERATE=0.0003;THETA=0.0001;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 227415806 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.827;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8535;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227415886 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0127;AVGPOST=0.9989;RSQ=0.9615;ERATE=0.0006;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 227415905 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1493;AVGPOST=0.9986;RSQ=0.9951;ERATE=0.0004;THETA=0.0002;AC=326;AN=2184 GT:DS:GL:BD 0.14926741 0
1 227415964 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.696;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4815;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227416153 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0329;AVGPOST=0.9989;RSQ=0.9856;ERATE=0.0003;THETA=0.0003;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 227416199 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0671;AVGPOST=0.9993;RSQ=0.9952;ERATE=0.0003;THETA=0.0002;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 227416204 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227416247 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8411;AVGPOST=0.9989;RSQ=0.9966;ERATE=0.0003;THETA=0.0001;AC=1836;AN=2184 GT:DS:GL:BD 0.84065932 1
1 227416371 rs34734618 TC T 25950 PASS INDEL;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.2218;AVGPOST=0.9978;RSQ=0.9947;ERATE=0.0004;THETA=0.0005;AC=483;AN=2184 GT:DS:GL:BD 0.22115384 0
1 227416374 . CT C 705 PASS INDEL;BAVGPOST=0.936;BRSQ=0.813;LDAF=0.1839;AVGPOST=0.9609;RSQ=0.9115;ERATE=0.0004;THETA=0.0002;AC=408;AN=2184 GT:DS:GL:BD 0.18681319 0
1 227416471 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0380;AVGPOST=0.9998;RSQ=0.9975;ERATE=0.0003;THETA=0.0003;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 227416540 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0016;AVGPOST=0.9983;RSQ=0.5820;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227416629 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0115;AVGPOST=0.9998;RSQ=0.9911;ERATE=0.0003;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227416633 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5943;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227416636 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0772;AVGPOST=0.9984;RSQ=0.9909;ERATE=0.0003;THETA=0.0003;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 227416677 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8646;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227416743 . G GT 803 PASS INDEL;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0115;AVGPOST=0.9975;RSQ=0.9102;ERATE=0.0005;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227416786 . CAT C 1046 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9987;RSQ=0.9396;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227416788 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0033;AVGPOST=0.9987;RSQ=0.8422;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227416819 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3454;AVGPOST=0.9986;RSQ=0.9973;ERATE=0.0003;THETA=0.0003;AC=755;AN=2184 GT:DS:GL:BD 0.34569597 0
1 227416878 . ATTGAG A 525 PASS INDEL;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0035;AVGPOST=0.9992;RSQ=0.8957;ERATE=0.0005;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227416898 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227416910 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.727;LDAF=0.0017;AVGPOST=0.9980;RSQ=0.5859;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227416912 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4532;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227417012 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9524;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227417193 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1845;AVGPOST=0.9990;RSQ=0.9974;ERATE=0.0003;THETA=0.0002;AC=402;AN=2184 GT:DS:GL:BD 0.18406594 0
1 227417280 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.838;LDAF=0.0060;AVGPOST=0.9977;RSQ=0.8595;ERATE=0.0003;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227417394 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.688;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8259;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227417417 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.943;LDAF=0.0282;AVGPOST=0.9944;RSQ=0.9311;ERATE=0.0003;THETA=0.0005;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 227417418 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4867;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227417422 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227417431 . TTAGA T 92 PASS INDEL;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7222;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227417478 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0035;AVGPOST=0.9975;RSQ=0.7562;ERATE=0.0002;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227417492 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0089;AVGPOST=0.9995;RSQ=0.9754;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 227417499 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7773;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227417542 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8284;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227417657 . ACT A 105 PASS INDEL;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8495;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227417660 . GAT G 121 PASS INDEL;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6529;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227417665 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227417723 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0157;AVGPOST=0.9995;RSQ=0.9873;ERATE=0.0003;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 227417946 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8621;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227418128 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9599;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227418130 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4963;AVGPOST=0.9991;RSQ=0.9983;ERATE=0.0004;THETA=0.0009;AC=1083;AN=2184 GT:DS:GL:BD 0.49587911 0
1 227418275 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1253;AVGPOST=0.9995;RSQ=0.9979;ERATE=0.0003;THETA=0.0023;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 227418389 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.8373;AVGPOST=0.9971;RSQ=0.9909;ERATE=0.0007;THETA=0.0004;AC=1830;AN=2184 GT:DS:GL:BD 0.83791208 1
1 227418419 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0037;AVGPOST=0.9996;RSQ=0.9509;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227418455 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0325;AVGPOST=0.9990;RSQ=0.9863;ERATE=0.0003;THETA=0.0006;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 227418520 . TC T 19805 PASS INDEL;BAVGPOST=0.948;BRSQ=0.842;LDAF=0.7772;AVGPOST=0.8754;RSQ=0.7258;ERATE=0.0175;THETA=0.0007;AC=1746;AN=2184 GT:DS:GL:BD 0.79945058 1
1 227418527 . T TC 550 PASS INDEL;BAVGPOST=0.934;BRSQ=0.490;LDAF=0.1048;AVGPOST=0.8919;RSQ=0.5614;ERATE=0.0094;THETA=0.0004;AC=167;AN=2184 GT:DS:GL:BD 0.07646520 0
1 227418568 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.871;LDAF=0.0638;AVGPOST=0.9936;RSQ=0.9583;ERATE=0.0006;THETA=0.0001;AC=136;AN=2184 GT:DS:GL:BD 0.06227106 0
1 227418615 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.960;LDAF=0.0670;AVGPOST=0.9989;RSQ=0.9929;ERATE=0.0003;THETA=0.0006;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 227418794 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.904;LDAF=0.0481;AVGPOST=0.9947;RSQ=0.9582;ERATE=0.0007;THETA=0.0006;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 227418928 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.941;LDAF=0.4868;AVGPOST=0.9873;RSQ=0.9798;ERATE=0.0005;THETA=0.0004;AC=1071;AN=2184 GT:DS:GL:BD 0.49038461 0
1 227418936 . GTT G 10941 PASS INDEL;BAVGPOST=0.945;BRSQ=0.848;LDAF=0.2005;AVGPOST=0.9485;RSQ=0.8849;ERATE=0.0080;THETA=0.0005;AC=439;AN=2184 GT:DS:GL:BD 0.20100732 0
1 227418973 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0023;AVGPOST=0.9980;RSQ=0.6961;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227418992 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.597;LDAF=0.0059;AVGPOST=0.9946;RSQ=0.6570;ERATE=0.0007;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227419012 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0699;AVGPOST=0.9946;RSQ=0.9684;ERATE=0.0005;THETA=0.0006;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 227419053 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.920;BRSQ=0.861;LDAF=0.4364;AVGPOST=0.9230;RSQ=0.8825;ERATE=0.0089;THETA=0.0002;AC=968;AN=2184 GT:DS:GL:BD 0.44322345 0
1 227419119 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.730;LDAF=0.0045;AVGPOST=0.9951;RSQ=0.5506;ERATE=0.0006;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227419152 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1269;AVGPOST=0.9960;RSQ=0.9839;ERATE=0.0006;THETA=0.0004;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 227419240 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0853;AVGPOST=0.9990;RSQ=0.9942;ERATE=0.0004;THETA=0.0001;AC=186;AN=2184 GT:DS:GL:BD 0.08516484 0
1 227419363 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.5987;ERATE=0.0006;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227419584 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0673;AVGPOST=0.9986;RSQ=0.9903;ERATE=0.0003;THETA=0.0002;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 227419750 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.794;LDAF=0.0018;AVGPOST=0.9994;RSQ=0.8469;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227419878 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.2268;AVGPOST=0.9979;RSQ=0.9946;ERATE=0.0004;THETA=0.0001;AC=494;AN=2184 GT:DS:GL:BD 0.22619048 0
1 227419947 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.949;LDAF=0.1439;AVGPOST=0.9908;RSQ=0.9722;ERATE=0.0009;THETA=0.0001;AC=312;AN=2184 GT:DS:GL:BD 0.14285715 0
1 227419992 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6351;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227420029 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227420033 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.991;LDAF=0.4943;AVGPOST=0.9786;RSQ=0.9681;ERATE=0.0051;THETA=0.0009;AC=1081;AN=2184 GT:DS:GL:BD 0.49496338 0
1 227420111 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0329;AVGPOST=0.9989;RSQ=0.9868;ERATE=0.0003;THETA=0.0002;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 227420148 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.902;LDAF=0.0154;AVGPOST=0.9972;RSQ=0.9370;ERATE=0.0003;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 227420350 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0028;AVGPOST=0.9982;RSQ=0.7469;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227420360 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.4895;AVGPOST=0.9924;RSQ=0.9882;ERATE=0.0010;THETA=0.0003;AC=1072;AN=2184 GT:DS:GL:BD 0.49084249 0
1 227420411 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7139;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227420480 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0325;AVGPOST=0.9995;RSQ=0.9921;ERATE=0.0003;THETA=0.0010;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 227420487 . AG A 76 PASS INDEL;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6362;ERATE=0.0003;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227420579 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.744;LDAF=0.0050;AVGPOST=0.9937;RSQ=0.4906;ERATE=0.0005;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227420589 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0382;AVGPOST=0.9995;RSQ=0.9940;ERATE=0.0003;THETA=0.0003;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 227420743 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0063;AVGPOST=0.9959;RSQ=0.7796;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227420800 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.968;LDAF=0.0434;AVGPOST=0.9965;RSQ=0.9678;ERATE=0.0005;THETA=0.0005;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 227420862 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.4970;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227420985 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.970;LDAF=0.4771;AVGPOST=0.9674;RSQ=0.9502;ERATE=0.0036;THETA=0.0003;AC=1039;AN=2184 GT:DS:GL:BD 0.47573259 0
1 227421028 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.644;LDAF=0.0062;AVGPOST=0.9958;RSQ=0.7150;ERATE=0.0005;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227421071 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1262;AVGPOST=0.9981;RSQ=0.9930;ERATE=0.0006;THETA=0.0021;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 227421117 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0853;AVGPOST=0.9991;RSQ=0.9951;ERATE=0.0003;THETA=0.0002;AC=186;AN=2184 GT:DS:GL:BD 0.08516484 0
1 227421187 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7496;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227421245 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1848;AVGPOST=0.9976;RSQ=0.9940;ERATE=0.0006;THETA=0.0003;AC=404;AN=2184 GT:DS:GL:BD 0.18498169 0
1 227421350 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.759;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7888;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227421424 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7612;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227421430 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0397;AVGPOST=0.9974;RSQ=0.9749;ERATE=0.0004;THETA=0.0004;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 227421494 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.955;LDAF=0.1264;AVGPOST=0.9947;RSQ=0.9822;ERATE=0.0009;THETA=0.0002;AC=278;AN=2184 GT:DS:GL:BD 0.12728938 0
1 227421615 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1860;AVGPOST=0.9978;RSQ=0.9948;ERATE=0.0006;THETA=0.0003;AC=405;AN=2184 GT:DS:GL:BD 0.18543956 0
1 227421718 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.6208;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227421821 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0328;AVGPOST=0.9993;RSQ=0.9913;ERATE=0.0003;THETA=0.0010;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 227421824 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7905;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227421844 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6610;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227421870 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1192;AVGPOST=0.9992;RSQ=0.9969;ERATE=0.0003;THETA=0.0002;AC=261;AN=2184 GT:DS:GL:BD 0.11950549 0
1 227421905 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1196;AVGPOST=0.9983;RSQ=0.9931;ERATE=0.0003;THETA=0.0003;AC=261;AN=2184 GT:DS:GL:BD 0.11950549 0
1 227421965 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1846;AVGPOST=0.9983;RSQ=0.9958;ERATE=0.0003;THETA=0.0008;AC=403;AN=2184 GT:DS:GL:BD 0.18452381 0
1 227421971 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.890;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7674;ERATE=0.0004;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227421980 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0848;AVGPOST=0.9995;RSQ=0.9972;ERATE=0.0002;THETA=0.0002;AC=186;AN=2184 GT:DS:GL:BD 0.08516484 0
1 227421999 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0111;AVGPOST=0.9998;RSQ=0.9926;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 227422006 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6646;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227422012 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=0.9998;RSQ=0.9868;ERATE=0.0002;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227422081 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0157;AVGPOST=0.9997;RSQ=0.9919;ERATE=0.0003;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 227422169 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0059;AVGPOST=0.9999;RSQ=0.9926;ERATE=0.0002;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227422234 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.8426;AVGPOST=0.9990;RSQ=0.9968;ERATE=0.0003;THETA=0.0003;AC=1840;AN=2184 GT:DS:GL:BD 0.84249085 1
1 227422363 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=1.0000;RSQ=0.9941;ERATE=0.0002;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227422366 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1258;AVGPOST=0.9997;RSQ=0.9989;ERATE=0.0002;THETA=0.0003;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 227422371 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2210;AVGPOST=0.9992;RSQ=0.9982;ERATE=0.0003;THETA=0.0005;AC=482;AN=2184 GT:DS:GL:BD 0.22069597 0
1 227422406 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0330;AVGPOST=0.9988;RSQ=0.9854;ERATE=0.0003;THETA=0.0005;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 227422445 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0381;AVGPOST=0.9996;RSQ=0.9961;ERATE=0.0002;THETA=0.0017;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 227422566 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0110;AVGPOST=1.0000;RSQ=0.9981;ERATE=0.0002;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 227422862 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1514;AVGPOST=0.9995;RSQ=0.9981;ERATE=0.0003;THETA=0.0002;AC=330;AN=2184 GT:DS:GL:BD 0.15109891 0
1 227422882 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.7105;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227422999 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0206;AVGPOST=0.9999;RSQ=0.9981;ERATE=0.0002;THETA=0.0002;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 227423277 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1248;AVGPOST=0.9990;RSQ=0.9962;ERATE=0.0003;THETA=0.0004;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 227423490 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2204;AVGPOST=0.9989;RSQ=0.9972;ERATE=0.0004;THETA=0.0005;AC=480;AN=2184 GT:DS:GL:BD 0.21978022 0
1 227423574 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0129;AVGPOST=0.9995;RSQ=0.9820;ERATE=0.0002;THETA=0.0006;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 227423587 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.1504;AVGPOST=0.9985;RSQ=0.9952;ERATE=0.0004;THETA=0.0003;AC=327;AN=2184 GT:DS:GL:BD 0.14972527 0
1 227423719 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0207;AVGPOST=0.9997;RSQ=0.9939;ERATE=0.0003;THETA=0.0004;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 227423735 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1519;AVGPOST=0.9989;RSQ=0.9964;ERATE=0.0003;THETA=0.0005;AC=331;AN=2184 GT:DS:GL:BD 0.15155677 0
1 227423793 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0083;AVGPOST=0.9982;RSQ=0.9135;ERATE=0.0004;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 227423946 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1837;AVGPOST=0.9979;RSQ=0.9943;ERATE=0.0003;THETA=0.0003;AC=401;AN=2184 GT:DS:GL:BD 0.18360806 0
1 227423965 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0039;AVGPOST=0.9976;RSQ=0.7404;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227424053 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6177;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227424112 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.890;LDAF=0.0065;AVGPOST=0.9989;RSQ=0.9254;ERATE=0.0002;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227424173 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3455;AVGPOST=0.9964;RSQ=0.9938;ERATE=0.0005;THETA=0.0003;AC=753;AN=2184 GT:DS:GL:BD 0.34478021 0
1 227424248 . A ACCT 22998 PASS INDEL;BAVGPOST=0.943;BRSQ=0.844;LDAF=0.7864;AVGPOST=0.9168;RSQ=0.8216;ERATE=0.0147;THETA=0.0009;AC=1758;AN=2184 GT:DS:GL:BD 0.80494505 1
1 227424249 rs10659369 C CCTT 100915 PASS INDEL;BAVGPOST=0.974;BRSQ=0.919;LDAF=0.8293;AVGPOST=0.9800;RSQ=0.9466;ERATE=0.0030;THETA=0.0008;AC=1817;AN=2184 GT:DS:GL:BD 0.83195972 1
1 227424284 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3448;AVGPOST=0.9973;RSQ=0.9952;ERATE=0.0006;THETA=0.0006;AC=753;AN=2184 GT:DS:GL:BD 0.34478021 0
1 227424345 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8418;AVGPOST=0.9991;RSQ=0.9969;ERATE=0.0003;THETA=0.0003;AC=1838;AN=2184 GT:DS:GL:BD 0.84157509 1
1 227424428 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0059;AVGPOST=0.9996;RSQ=0.9705;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227424475 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0130;AVGPOST=0.9995;RSQ=0.9811;ERATE=0.0003;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 227424539 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.603;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6646;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227424546 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0382;AVGPOST=0.9991;RSQ=0.9909;ERATE=0.0004;THETA=0.0004;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 227424665 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0664;AVGPOST=0.9997;RSQ=0.9976;ERATE=0.0002;THETA=0.0031;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 227424692 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3463;AVGPOST=0.9952;RSQ=0.9909;ERATE=0.0010;THETA=0.0001;AC=755;AN=2184 GT:DS:GL:BD 0.34569597 0
1 227424733 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4559;ERATE=0.0003;THETA=0.0074;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227424736 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1256;AVGPOST=0.9984;RSQ=0.9946;ERATE=0.0003;THETA=0.0011;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 227424929 rs36078322 C CAT 34645 PASS INDEL;BAVGPOST=0.986;BRSQ=0.972;LDAF=0.3459;AVGPOST=0.9887;RSQ=0.9810;ERATE=0.0003;THETA=0.0003;AC=759;AN=2184 GT:DS:GL:BD 0.34752747 0
1 227424932 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.979;LDAF=0.3456;AVGPOST=0.9885;RSQ=0.9806;ERATE=0.0007;THETA=0.0002;AC=757;AN=2184 GT:DS:GL:BD 0.34661171 0
1 227424932 . G GATA 28022 PASS INDEL;BAVGPOST=0.985;BRSQ=0.976;LDAF=0.3463;AVGPOST=0.9888;RSQ=0.9810;ERATE=0.0004;THETA=0.0002;AC=757;AN=2184 GT:DS:GL:BD 0.34661171 0
1 227424961 . CA C 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.750;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.6994;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227425072 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.4970;ERATE=0.0003;THETA=0.0023;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227425250 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0022;AVGPOST=0.9978;RSQ=0.6381;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227425330 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0015;AVGPOST=0.9983;RSQ=0.5836;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227425406 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.896;LDAF=0.0030;AVGPOST=0.9986;RSQ=0.8304;ERATE=0.0003;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227425446 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0040;AVGPOST=0.9989;RSQ=0.8824;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227425469 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.668;LDAF=0.0050;AVGPOST=0.9957;RSQ=0.6771;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227425601 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0590;AVGPOST=0.9991;RSQ=0.9937;ERATE=0.0003;THETA=0.0036;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 227425676 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.797;LDAF=0.0050;AVGPOST=0.9973;RSQ=0.7816;ERATE=0.0005;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227425775 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.1248;AVGPOST=0.9996;RSQ=0.9986;ERATE=0.0003;THETA=0.0002;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 227425955 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.3455;AVGPOST=0.9983;RSQ=0.9968;ERATE=0.0003;THETA=0.0006;AC=755;AN=2184 GT:DS:GL:BD 0.34569597 0
1 227426023 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0835;AVGPOST=0.9978;RSQ=0.9884;ERATE=0.0003;THETA=0.0003;AC=182;AN=2184 GT:DS:GL:BD 0.08333334 0
1 227426072 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.6617;AVGPOST=0.9986;RSQ=0.9974;ERATE=0.0004;THETA=0.0009;AC=1445;AN=2184 GT:DS:GL:BD 0.66163003 1
1 227426205 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1249;AVGPOST=0.9993;RSQ=0.9972;ERATE=0.0003;THETA=0.0003;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 227426430 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0047;AVGPOST=0.9994;RSQ=0.9378;ERATE=0.0003;THETA=0.0018;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227426502 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0282;AVGPOST=0.9985;RSQ=0.9779;ERATE=0.0003;THETA=0.0004;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 227426663 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2208;AVGPOST=0.9996;RSQ=0.9990;ERATE=0.0002;THETA=0.0003;AC=482;AN=2184 GT:DS:GL:BD 0.22069597 0
1 227426672 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0187;AVGPOST=0.9991;RSQ=0.9782;ERATE=0.0002;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 227426713 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0667;AVGPOST=0.9989;RSQ=0.9935;ERATE=0.0003;THETA=0.0004;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 227426744 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227426838 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2209;AVGPOST=0.9996;RSQ=0.9990;ERATE=0.0003;THETA=0.0005;AC=482;AN=2184 GT:DS:GL:BD 0.22069597 0
1 227426854 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.682;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8026;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227427231 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0156;AVGPOST=0.9998;RSQ=0.9939;ERATE=0.0003;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 227427308 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0007;AVGPOST=0.9990;RSQ=0.4429;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227427346 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7045;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227427383 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.836;LDAF=0.0043;AVGPOST=0.9979;RSQ=0.8136;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227427390 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6745;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227427413 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2206;AVGPOST=0.9987;RSQ=0.9967;ERATE=0.0003;THETA=0.0002;AC=480;AN=2184 GT:DS:GL:BD 0.21978022 0
1 227427474 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7206;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227427493 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2204;AVGPOST=0.9991;RSQ=0.9977;ERATE=0.0003;THETA=0.0003;AC=480;AN=2184 GT:DS:GL:BD 0.21978022 0
1 227427551 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.3448;AVGPOST=0.9969;RSQ=0.9940;ERATE=0.0005;THETA=0.0004;AC=755;AN=2184 GT:DS:GL:BD 0.34569597 0
1 227427644 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.984;LDAF=0.1837;AVGPOST=0.9967;RSQ=0.9923;ERATE=0.0004;THETA=0.0002;AC=400;AN=2184 GT:DS:GL:BD 0.18315019 0
1 227427648 . A AC 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5398;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227427650 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.983;LDAF=0.2198;AVGPOST=0.9947;RSQ=0.9890;ERATE=0.0004;THETA=0.0002;AC=479;AN=2184 GT:DS:GL:BD 0.21932234 0
1 227427654 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.986;LDAF=0.3441;AVGPOST=0.9948;RSQ=0.9912;ERATE=0.0003;THETA=0.0005;AC=752;AN=2184 GT:DS:GL:BD 0.34432235 0
1 227427656 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0052;AVGPOST=0.9996;RSQ=0.9663;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227427671 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.2438;AVGPOST=0.9985;RSQ=0.9967;ERATE=0.0003;THETA=0.0007;AC=533;AN=2184 GT:DS:GL:BD 0.24404761 0
1 227427678 . AT A 552 PASS INDEL;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0071;AVGPOST=0.9973;RSQ=0.8410;ERATE=0.0004;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227427747 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7017;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227427831 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0058;AVGPOST=0.9991;RSQ=0.9366;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227427936 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0095;AVGPOST=0.9983;RSQ=0.9409;ERATE=0.0003;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 227428079 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.986;LDAF=0.0767;AVGPOST=0.9975;RSQ=0.9863;ERATE=0.0005;THETA=0.0003;AC=167;AN=2184 GT:DS:GL:BD 0.07646520 0
1 227428112 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.862;LDAF=0.0054;AVGPOST=0.9992;RSQ=0.9534;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227428154 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2284;AVGPOST=0.9984;RSQ=0.9965;ERATE=0.0003;THETA=0.0002;AC=497;AN=2184 GT:DS:GL:BD 0.22756410 0
1 227428306 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.1248;AVGPOST=0.9997;RSQ=0.9989;ERATE=0.0003;THETA=0.0003;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 227428376 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.727;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5852;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227428406 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.989;LDAF=0.1846;AVGPOST=0.9983;RSQ=0.9954;ERATE=0.0006;THETA=0.0006;AC=403;AN=2184 GT:DS:GL:BD 0.18452381 0
1 227428465 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5035;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227428478 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7691;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227428571 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.5579;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227428621 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2206;AVGPOST=0.9992;RSQ=0.9980;ERATE=0.0003;THETA=0.0006;AC=482;AN=2184 GT:DS:GL:BD 0.22069597 0
1 227428633 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.571;LDAF=0.0042;AVGPOST=0.9942;RSQ=0.4903;ERATE=0.0012;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227428716 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9198;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227428767 . C CA 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4595;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227428792 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.0009;AVGPOST=0.9988;RSQ=0.4214;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227428804 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8446;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227428821 . G GAT 574 PASS INDEL;BAVGPOST=0.996;BRSQ=0.803;LDAF=0.0064;AVGPOST=0.9970;RSQ=0.8057;ERATE=0.0005;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227428903 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3458;AVGPOST=0.9991;RSQ=0.9982;ERATE=0.0002;THETA=0.0034;AC=755;AN=2184 GT:DS:GL:BD 0.34569597 0
1 227428978 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0664;AVGPOST=0.9995;RSQ=0.9966;ERATE=0.0003;THETA=0.0003;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 227429024 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7149;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227429037 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0065;AVGPOST=0.9988;RSQ=0.9412;ERATE=0.0002;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227429045 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3454;AVGPOST=0.9988;RSQ=0.9975;ERATE=0.0003;THETA=0.0003;AC=755;AN=2184 GT:DS:GL:BD 0.34569597 0
1 227429130 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0109;AVGPOST=0.9998;RSQ=0.9913;ERATE=0.0002;THETA=0.0012;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 227429267 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6525;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227429380 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.744;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5730;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227429681 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0192;AVGPOST=0.9991;RSQ=0.9781;ERATE=0.0003;THETA=0.0005;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 227429716 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227429861 . TATC T 1259 PASS INDEL;BAVGPOST=0.994;BRSQ=0.824;LDAF=0.0170;AVGPOST=0.9973;RSQ=0.9435;ERATE=0.0006;THETA=0.0002;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 227429988 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0042;AVGPOST=0.9997;RSQ=0.9637;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227430007 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.799;LDAF=0.0029;AVGPOST=0.9993;RSQ=0.8909;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227430061 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227430067 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6492;ERATE=0.0005;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227430191 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1845;AVGPOST=0.9992;RSQ=0.9977;ERATE=0.0003;THETA=0.0002;AC=403;AN=2184 GT:DS:GL:BD 0.18452381 0
1 227430198 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.797;LDAF=0.0135;AVGPOST=0.9934;RSQ=0.8315;ERATE=0.0003;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 227430346 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0044;AVGPOST=0.9983;RSQ=0.8303;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227430742 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.984;LDAF=0.1246;AVGPOST=0.9988;RSQ=0.9953;ERATE=0.0004;THETA=0.0002;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 227430769 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227430828 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4938;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227430841 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1869;AVGPOST=0.9978;RSQ=0.9953;ERATE=0.0004;THETA=0.0004;AC=408;AN=2184 GT:DS:GL:BD 0.18681319 0
1 227430877 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0159;AVGPOST=0.9992;RSQ=0.9794;ERATE=0.0002;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 227430894 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.864;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9432;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227430918 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3455;AVGPOST=0.9993;RSQ=0.9985;ERATE=0.0003;THETA=0.0003;AC=755;AN=2184 GT:DS:GL:BD 0.34569597 0
1 227430928 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8559;ERATE=0.0002;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227430930 . G GCTTA 3219 PASS INDEL;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0120;AVGPOST=0.9987;RSQ=0.9543;ERATE=0.0003;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 227430991 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1850;AVGPOST=0.9991;RSQ=0.9976;ERATE=0.0003;THETA=0.0005;AC=403;AN=2184 GT:DS:GL:BD 0.18452381 0
1 227431014 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0018;AVGPOST=0.9988;RSQ=0.7204;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227431045 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0031;AVGPOST=0.9965;RSQ=0.6360;ERATE=0.0004;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227431047 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7359;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227431086 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.721;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5704;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227431099 rs111430914 T TTAAGA 52946 PASS INDEL;BAVGPOST=0.972;BRSQ=0.942;LDAF=0.3414;AVGPOST=0.9892;RSQ=0.9798;ERATE=0.0014;THETA=0.0003;AC=750;AN=2184 GT:DS:GL:BD 0.34340659 0
1 227431102 . A AGAT 11020 PASS INDEL;BAVGPOST=0.957;BRSQ=0.900;LDAF=0.3206;AVGPOST=0.9482;RSQ=0.9029;ERATE=0.0133;THETA=0.0011;AC=706;AN=2184 GT:DS:GL:BD 0.32326007 0
1 227431264 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8656;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227431403 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5493;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227431406 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3446;AVGPOST=0.9972;RSQ=0.9945;ERATE=0.0005;THETA=0.0014;AC=753;AN=2184 GT:DS:GL:BD 0.34478021 0
1 227431476 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7451;ERATE=0.0002;THETA=0.0022;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227431744 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0021;AVGPOST=0.9982;RSQ=0.6642;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227431893 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7220;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227432122 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.835;LDAF=0.0050;AVGPOST=0.9994;RSQ=0.9453;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227432159 rs112630640 T TCAGAATAGTTAA 43219 PASS INDEL;BAVGPOST=0.921;BRSQ=0.831;LDAF=0.3168;AVGPOST=0.9590;RSQ=0.9278;ERATE=0.0031;THETA=0.0015;AC=715;AN=2184 GT:DS:GL:BD 0.32738096 0
1 227432161 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8282;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227432196 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1867;AVGPOST=0.9987;RSQ=0.9964;ERATE=0.0003;THETA=0.0001;AC=409;AN=2184 GT:DS:GL:BD 0.18727106 0
1 227432217 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6012;ERATE=0.0002;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227432270 . CTCA C 676 PASS INDEL;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0068;AVGPOST=0.9966;RSQ=0.8111;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227432457 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6692;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227432541 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0156;AVGPOST=0.9998;RSQ=0.9951;ERATE=0.0002;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 227432556 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0004;AVGPOST=0.9994;RSQ=0.4378;ERATE=0.0002;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 227432578 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5207;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227432586 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0045;AVGPOST=0.9990;RSQ=0.9120;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227432672 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5077;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227432753 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0327;AVGPOST=0.9994;RSQ=0.9914;ERATE=0.0002;THETA=0.0002;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 227432772 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.0028;AVGPOST=0.9979;RSQ=0.7094;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227432857 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3451;AVGPOST=0.9992;RSQ=0.9983;ERATE=0.0004;THETA=0.0002;AC=755;AN=2184 GT:DS:GL:BD 0.34569597 0
1 227432923 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6662;AVGPOST=0.9975;RSQ=0.9953;ERATE=0.0006;THETA=0.0004;AC=1456;AN=2184 GT:DS:GL:BD 0.66666669 1
1 227432983 . ATCTTTTTTTT A 12990 PASS INDEL;BAVGPOST=0.988;BRSQ=0.950;LDAF=0.1207;AVGPOST=0.9904;RSQ=0.9656;ERATE=0.0017;THETA=0.0005;AC=264;AN=2184 GT:DS:GL:BD 0.12087912 0
1 227433025 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.982;LDAF=0.3420;AVGPOST=0.9916;RSQ=0.9853;ERATE=0.0008;THETA=0.0005;AC=748;AN=2184 GT:DS:GL:BD 0.34249085 0
1 227433030 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.0797;AVGPOST=0.9990;RSQ=0.9940;ERATE=0.0003;THETA=0.0007;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 227433110 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.766;LDAF=0.0031;AVGPOST=0.9969;RSQ=0.6096;ERATE=0.0005;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227433116 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.901;LDAF=0.0514;AVGPOST=0.9938;RSQ=0.9519;ERATE=0.0003;THETA=0.0004;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 227433256 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0864;AVGPOST=0.9961;RSQ=0.9808;ERATE=0.0004;THETA=0.0004;AC=186;AN=2184 GT:DS:GL:BD 0.08516484 0
1 227433271 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.748;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5417;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227433337 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3453;AVGPOST=0.9984;RSQ=0.9966;ERATE=0.0007;THETA=0.0002;AC=755;AN=2184 GT:DS:GL:BD 0.34569597 0
1 227433347 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0016;AVGPOST=0.9981;RSQ=0.5485;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227433496 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.789;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7698;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227433525 . AG A 105 PASS INDEL;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8702;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227433576 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5281;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227433647 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.7246;ERATE=0.0002;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227433690 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3454;AVGPOST=0.9977;RSQ=0.9956;ERATE=0.0006;THETA=0.0006;AC=756;AN=2184 GT:DS:GL:BD 0.34615386 0
1 227433743 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.696;LDAF=0.0032;AVGPOST=0.9986;RSQ=0.8198;ERATE=0.0004;THETA=0.0001;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227433767 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0080;AVGPOST=0.9993;RSQ=0.9564;ERATE=0.0003;THETA=0.0010;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227433775 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.3928;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227433987 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.754;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8472;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227434054 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.981;LDAF=0.3497;AVGPOST=0.9852;RSQ=0.9744;ERATE=0.0057;THETA=0.0004;AC=764;AN=2184 GT:DS:GL:BD 0.34981686 0
1 227434083 . AACTC A 2722 PASS INDEL;BAVGPOST=0.996;BRSQ=0.930;LDAF=0.0327;AVGPOST=0.9990;RSQ=0.9858;ERATE=0.0003;THETA=0.0008;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 227434106 . GC G 1617 PASS INDEL;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0140;AVGPOST=0.9973;RSQ=0.9145;ERATE=0.0005;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 227434158 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0031;AVGPOST=0.9971;RSQ=0.6426;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227434212 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.845;LDAF=0.0041;AVGPOST=0.9987;RSQ=0.8889;ERATE=0.0002;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227434221 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.6276;ERATE=0.0003;THETA=0.0024;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227434311 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.8091;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227434376 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.956;LDAF=0.8525;AVGPOST=0.9934;RSQ=0.9806;ERATE=0.0003;THETA=0.0005;AC=1861;AN=2184 GT:DS:GL:BD 0.85210621 1
1 227434501 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0030;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227434566 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3443;AVGPOST=0.9931;RSQ=0.9878;ERATE=0.0019;THETA=0.0017;AC=755;AN=2184 GT:DS:GL:BD 0.34569597 0
1 227434619 . G GC 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4837;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227434634 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8301;ERATE=0.0004;THETA=0.0056;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227434681 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.970;LDAF=0.3257;AVGPOST=0.9852;RSQ=0.9732;ERATE=0.0023;THETA=0.0006;AC=716;AN=2184 GT:DS:GL:BD 0.32783884 0
1 227434828 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.823;LDAF=0.0303;AVGPOST=0.9939;RSQ=0.9163;ERATE=0.0005;THETA=0.0003;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 227434839 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0672;AVGPOST=0.9994;RSQ=0.9956;ERATE=0.0003;THETA=0.0007;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 227434851 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7384;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227434937 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0064;AVGPOST=0.9991;RSQ=0.9360;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227435032 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5120;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227435086 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.2204;AVGPOST=0.9992;RSQ=0.9979;ERATE=0.0003;THETA=0.0009;AC=482;AN=2184 GT:DS:GL:BD 0.22069597 0
1 227435152 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.971;LDAF=0.3403;AVGPOST=0.9906;RSQ=0.9837;ERATE=0.0014;THETA=0.0003;AC=748;AN=2184 GT:DS:GL:BD 0.34249085 0
1 227435244 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8026;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227435264 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.875;LDAF=0.0136;AVGPOST=0.9970;RSQ=0.9141;ERATE=0.0003;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 227435338 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.972;LDAF=0.3447;AVGPOST=0.9927;RSQ=0.9876;ERATE=0.0011;THETA=0.0009;AC=755;AN=2184 GT:DS:GL:BD 0.34569597 0
1 227435367 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.953;LDAF=0.3405;AVGPOST=0.9781;RSQ=0.9619;ERATE=0.0024;THETA=0.0003;AC=747;AN=2184 GT:DS:GL:BD 0.34203297 0
1 227435491 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1259;AVGPOST=0.9944;RSQ=0.9809;ERATE=0.0005;THETA=0.0047;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 227435531 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.734;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.5837;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227435622 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.787;LDAF=0.0043;AVGPOST=0.9979;RSQ=0.8029;ERATE=0.0002;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227435624 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7952;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227435673 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0052;AVGPOST=0.9996;RSQ=0.9665;ERATE=0.0002;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227435770 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9496;ERATE=0.0002;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227435798 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.8204;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227435849 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0664;AVGPOST=0.9995;RSQ=0.9966;ERATE=0.0003;THETA=0.0074;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 227435884 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0027;AVGPOST=0.9969;RSQ=0.6155;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227435904 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7689;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227436025 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1844;AVGPOST=0.9975;RSQ=0.9940;ERATE=0.0006;THETA=0.0005;AC=403;AN=2184 GT:DS:GL:BD 0.18452381 0
1 227436029 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0039;AVGPOST=0.9979;RSQ=0.8288;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227436067 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.899;LDAF=0.0033;AVGPOST=0.9988;RSQ=0.8511;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227436078 . A AC 4787 PASS INDEL;BAVGPOST=0.924;BRSQ=0.676;LDAF=0.1454;AVGPOST=0.9065;RSQ=0.7131;ERATE=0.0216;THETA=0.0005;AC=254;AN=2184 GT:DS:GL:BD 0.11630037 0
1 227436079 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.973;LDAF=0.3505;AVGPOST=0.9887;RSQ=0.9815;ERATE=0.0005;THETA=0.0027;AC=764;AN=2184 GT:DS:GL:BD 0.34981686 0
1 227436079 . A AC 180 PASS INDEL;BAVGPOST=0.988;BRSQ=0.755;LDAF=0.0246;AVGPOST=0.9906;RSQ=0.8682;ERATE=0.0005;THETA=0.0002;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 227436116 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4512;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227436123 . GATACAAAATCAAC G 663 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9826;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227436140 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.979;LDAF=0.1237;AVGPOST=0.9963;RSQ=0.9873;ERATE=0.0006;THETA=0.0004;AC=270;AN=2184 GT:DS:GL:BD 0.12362637 0
1 227436196 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.976;LDAF=0.2238;AVGPOST=0.9940;RSQ=0.9854;ERATE=0.0008;THETA=0.0004;AC=491;AN=2184 GT:DS:GL:BD 0.22481684 0
1 227436289 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3440;AVGPOST=0.9971;RSQ=0.9948;ERATE=0.0007;THETA=0.0003;AC=752;AN=2184 GT:DS:GL:BD 0.34432235 0
1 227436302 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1244;AVGPOST=0.9988;RSQ=0.9961;ERATE=0.0003;THETA=0.0004;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 227436317 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0020;AVGPOST=0.9985;RSQ=0.6740;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227436402 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0329;AVGPOST=0.9991;RSQ=0.9888;ERATE=0.0003;THETA=0.0004;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 227436428 . GCA G 151 PASS INDEL;BAVGPOST=0.983;BRSQ=0.666;LDAF=0.0440;AVGPOST=0.9534;RSQ=0.5558;ERATE=0.0135;THETA=0.0004;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 227436491 rs79572442 C CA 735 PASS INDEL;BAVGPOST=0.997;BRSQ=0.870;LDAF=0.0084;AVGPOST=0.9982;RSQ=0.9133;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227436514 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.7249;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227436577 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7640;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227436581 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5623;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227436594 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5663;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227436638 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3468;AVGPOST=0.9945;RSQ=0.9905;ERATE=0.0009;THETA=0.0007;AC=758;AN=2184 GT:DS:GL:BD 0.34706959 0
1 227436666 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.1258;AVGPOST=0.9965;RSQ=0.9890;ERATE=0.0004;THETA=0.0005;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 227436734 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6552;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227436739 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227436767 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0096;AVGPOST=0.9989;RSQ=0.9527;ERATE=0.0003;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 227436880 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.980;LDAF=0.0692;AVGPOST=0.9969;RSQ=0.9809;ERATE=0.0005;THETA=0.0002;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 227436926 . C CTG 93 PASS INDEL;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5055;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227436973 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227437154 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1846;AVGPOST=0.9991;RSQ=0.9977;ERATE=0.0003;THETA=0.0005;AC=403;AN=2184 GT:DS:GL:BD 0.18452381 0
1 227437174 . A AG 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.4718;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227437194 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227437341 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.988;LDAF=0.1844;AVGPOST=0.9993;RSQ=0.9982;ERATE=0.0003;THETA=0.0013;AC=403;AN=2184 GT:DS:GL:BD 0.18452381 0
1 227437411 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9551;ERATE=0.0003;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227437484 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9865;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227437513 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.987;LDAF=0.1854;AVGPOST=0.9984;RSQ=0.9956;ERATE=0.0003;THETA=0.0007;AC=405;AN=2184 GT:DS:GL:BD 0.18543956 0
1 227437515 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.987;LDAF=0.1852;AVGPOST=0.9987;RSQ=0.9965;ERATE=0.0003;THETA=0.0003;AC=405;AN=2184 GT:DS:GL:BD 0.18543956 0
1 227437552 . C CA 533 PASS INDEL;BAVGPOST=0.992;BRSQ=0.702;LDAF=0.0167;AVGPOST=0.9866;RSQ=0.6948;ERATE=0.0027;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 227437596 rs35519315 AG A 7249 PASS INDEL;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0849;AVGPOST=0.9985;RSQ=0.9920;ERATE=0.0003;THETA=0.0007;AC=186;AN=2184 GT:DS:GL:BD 0.08516484 0
1 227437894 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0042;AVGPOST=0.9979;RSQ=0.7823;ERATE=0.0004;THETA=0.0014;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227438013 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227438031 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0047;AVGPOST=0.9987;RSQ=0.8956;ERATE=0.0002;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227438145 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.934;LDAF=0.0209;AVGPOST=0.9991;RSQ=0.9821;ERATE=0.0004;THETA=0.0005;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 227438224 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1252;AVGPOST=0.9971;RSQ=0.9898;ERATE=0.0007;THETA=0.0006;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 227438339 . GTA G 1845 PASS INDEL;BAVGPOST=0.966;BRSQ=0.819;LDAF=0.1033;AVGPOST=0.9644;RSQ=0.8640;ERATE=0.0043;THETA=0.0007;AC=222;AN=2184 GT:DS:GL:BD 0.10164835 0
1 227438341 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.952;LDAF=0.1292;AVGPOST=0.9881;RSQ=0.9605;ERATE=0.0036;THETA=0.0002;AC=276;AN=2184 GT:DS:GL:BD 0.12637363 0
1 227438361 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5247;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227438475 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8093;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227438528 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227438715 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.757;LDAF=0.0023;AVGPOST=0.9977;RSQ=0.5530;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227438726 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.5772;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227439019 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1597;AVGPOST=0.9986;RSQ=0.9959;ERATE=0.0003;THETA=0.0005;AC=349;AN=2184 GT:DS:GL:BD 0.15979853 0
1 227439063 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0038;AVGPOST=0.9980;RSQ=0.7754;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227439213 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.832;LDAF=0.0079;AVGPOST=0.9978;RSQ=0.8829;ERATE=0.0003;THETA=0.0011;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227439222 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0362;AVGPOST=0.9997;RSQ=0.9957;ERATE=0.0003;THETA=0.0002;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 227439239 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5878;ERATE=0.0003;THETA=0.0039;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227439357 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0780;AVGPOST=0.9989;RSQ=0.9924;ERATE=0.0003;THETA=0.0003;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 227439395 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6096;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227439435 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1610;AVGPOST=0.9996;RSQ=0.9986;ERATE=0.0003;THETA=0.0005;AC=352;AN=2184 GT:DS:GL:BD 0.16117217 0
1 227439575 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.660;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4723;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227439698 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.987;LDAF=0.1261;AVGPOST=0.9985;RSQ=0.9940;ERATE=0.0004;THETA=0.0007;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 227439821 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.2204;AVGPOST=0.9991;RSQ=0.9978;ERATE=0.0003;THETA=0.0005;AC=481;AN=2184 GT:DS:GL:BD 0.22023809 0
1 227439823 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0033;AVGPOST=0.9986;RSQ=0.8061;ERATE=0.0004;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227439855 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2242;AVGPOST=0.9948;RSQ=0.9885;ERATE=0.0005;THETA=0.0004;AC=487;AN=2184 GT:DS:GL:BD 0.22298534 0
1 227439974 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0048;AVGPOST=0.9981;RSQ=0.8423;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227440074 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0805;AVGPOST=0.9969;RSQ=0.9861;ERATE=0.0003;THETA=0.0003;AC=176;AN=2184 GT:DS:GL:BD 0.08058608 0
1 227440150 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6412;ERATE=0.0003;THETA=0.0051;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227440267 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.988;LDAF=0.2189;AVGPOST=0.9960;RSQ=0.9911;ERATE=0.0006;THETA=0.0006;AC=479;AN=2184 GT:DS:GL:BD 0.21932234 0
1 227440279 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0024;AVGPOST=0.9992;RSQ=0.8616;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227440280 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.986;LDAF=0.1836;AVGPOST=0.9957;RSQ=0.9904;ERATE=0.0005;THETA=0.0004;AC=402;AN=2184 GT:DS:GL:BD 0.18406594 0
1 227440294 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1249;AVGPOST=0.9994;RSQ=0.9976;ERATE=0.0003;THETA=0.0003;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 227440301 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.729;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9370;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227440361 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5975;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227440434 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.804;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7813;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227440458 rs35965521 T TCAA 39219 PASS INDEL;BAVGPOST=0.978;BRSQ=0.940;LDAF=0.2144;AVGPOST=0.9919;RSQ=0.9809;ERATE=0.0010;THETA=0.0004;AC=470;AN=2184 GT:DS:GL:BD 0.21520147 0
1 227440462 rs72513622 C CA 5747 PASS INDEL;BAVGPOST=0.967;BRSQ=0.900;LDAF=0.1874;AVGPOST=0.9652;RSQ=0.9176;ERATE=0.0027;THETA=0.0007;AC=415;AN=2184 GT:DS:GL:BD 0.19001831 0
1 227440543 . T TA 49 PASS INDEL;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.3885;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227440555 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0673;AVGPOST=0.9984;RSQ=0.9913;ERATE=0.0002;THETA=0.0012;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 227440598 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0055;AVGPOST=0.9973;RSQ=0.8412;ERATE=0.0003;THETA=0.0016;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227440634 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0076;AVGPOST=0.9985;RSQ=0.9148;ERATE=0.0003;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 227440652 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8259;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227440663 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3449;AVGPOST=0.9984;RSQ=0.9968;ERATE=0.0005;THETA=0.0007;AC=754;AN=2184 GT:DS:GL:BD 0.34523809 0
1 227440728 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5608;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227440734 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3484;AVGPOST=0.9957;RSQ=0.9922;ERATE=0.0004;THETA=0.0009;AC=760;AN=2184 GT:DS:GL:BD 0.34798536 0
1 227440882 . AAG A 189 PASS INDEL;BAVGPOST=0.985;BRSQ=0.558;LDAF=0.0348;AVGPOST=0.9561;RSQ=0.4816;ERATE=0.0086;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 227440927 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.616;LDAF=0.0023;AVGPOST=0.9977;RSQ=0.6484;ERATE=0.0006;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227440971 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.610;LDAF=0.0037;AVGPOST=0.9966;RSQ=0.6799;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227440977 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.938;LDAF=0.1809;AVGPOST=0.9935;RSQ=0.9843;ERATE=0.0006;THETA=0.0006;AC=398;AN=2184 GT:DS:GL:BD 0.18223444 0
1 227440978 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.619;LDAF=0.0016;AVGPOST=0.9976;RSQ=0.4342;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227440979 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.671;LDAF=0.0197;AVGPOST=0.9815;RSQ=0.6480;ERATE=0.0030;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 227441012 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0376;AVGPOST=0.9984;RSQ=0.9829;ERATE=0.0006;THETA=0.0007;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 227441241 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.764;LDAF=0.0034;AVGPOST=0.9983;RSQ=0.7657;ERATE=0.0006;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227441262 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.738;LDAF=0.0029;AVGPOST=0.9982;RSQ=0.7390;ERATE=0.0005;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227441289 . T TC 15 PASS INDEL;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227441312 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.924;BRSQ=0.767;LDAF=0.4128;AVGPOST=0.8996;RSQ=0.7394;ERATE=0.0976;THETA=0.0003;AC=881;AN=2184 GT:DS:GL:BD 0.40338829 0
1 227441316 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.963;BRSQ=0.868;LDAF=0.1861;AVGPOST=0.9348;RSQ=0.8254;ERATE=0.0208;THETA=0.0003;AC=378;AN=2184 GT:DS:GL:BD 0.17307693 0
1 227441343 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.805;LDAF=0.0115;AVGPOST=0.9977;RSQ=0.9159;ERATE=0.0005;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 227441360 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.948;LDAF=0.0568;AVGPOST=0.9916;RSQ=0.9497;ERATE=0.0029;THETA=0.0005;AC=123;AN=2184 GT:DS:GL:BD 0.05631868 0
1 227441468 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7193;ERATE=0.0002;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227441555 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227441593 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0077;AVGPOST=0.9995;RSQ=0.9743;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227441605 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0324;AVGPOST=0.9999;RSQ=0.9987;ERATE=0.0004;THETA=0.0003;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 227441960 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0380;AVGPOST=1.0000;RSQ=0.9995;ERATE=0.0002;THETA=0.0002;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 227441995 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227442231 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.6106;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227442234 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.898;LDAF=0.0044;AVGPOST=0.9989;RSQ=0.9046;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227442271 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3450;AVGPOST=0.9991;RSQ=0.9981;ERATE=0.0004;THETA=0.0003;AC=754;AN=2184 GT:DS:GL:BD 0.34523809 0
1 227442298 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0380;AVGPOST=0.9999;RSQ=0.9991;ERATE=0.0002;THETA=0.0003;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 227442373 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0364;AVGPOST=0.9993;RSQ=0.9911;ERATE=0.0003;THETA=0.0004;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 227442411 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.716;LDAF=0.0015;AVGPOST=0.9985;RSQ=0.5926;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227442498 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.719;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5277;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227442512 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.714;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7080;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227442535 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8558;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227442598 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3465;AVGPOST=0.9970;RSQ=0.9956;ERATE=0.0004;THETA=0.0003;AC=756;AN=2184 GT:DS:GL:BD 0.34615386 0
1 227442959 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0022;AVGPOST=0.9985;RSQ=0.7427;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227443009 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0038;AVGPOST=0.9995;RSQ=0.9429;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227443075 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0045;AVGPOST=0.9980;RSQ=0.8652;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227443147 rs35829988 AAGAG A 42363 PASS INDEL;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3455;AVGPOST=0.9966;RSQ=0.9939;ERATE=0.0012;THETA=0.0002;AC=755;AN=2184 GT:DS:GL:BD 0.34569597 0
1 227443197 . G GA 3054 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0363;AVGPOST=0.9994;RSQ=0.9923;ERATE=0.0003;THETA=0.0016;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 227443232 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3447;AVGPOST=0.9992;RSQ=0.9983;ERATE=0.0004;THETA=0.0004;AC=754;AN=2184 GT:DS:GL:BD 0.34523809 0
1 227443245 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0668;AVGPOST=0.9986;RSQ=0.9923;ERATE=0.0002;THETA=0.0004;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 227443324 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.967;LDAF=0.0361;AVGPOST=0.9995;RSQ=0.9933;ERATE=0.0003;THETA=0.0013;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 227443476 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227443504 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3452;AVGPOST=0.9966;RSQ=0.9935;ERATE=0.0009;THETA=0.0001;AC=754;AN=2184 GT:DS:GL:BD 0.34523809 0
1 227443559 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2248;AVGPOST=0.9986;RSQ=0.9966;ERATE=0.0003;THETA=0.0001;AC=490;AN=2184 GT:DS:GL:BD 0.22435898 0
1 227443613 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0851;AVGPOST=0.9987;RSQ=0.9944;ERATE=0.0003;THETA=0.0003;AC=187;AN=2184 GT:DS:GL:BD 0.08562271 0
1 227443723 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2254;AVGPOST=0.9983;RSQ=0.9961;ERATE=0.0004;THETA=0.0012;AC=490;AN=2184 GT:DS:GL:BD 0.22435898 0
1 227443859 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0090;AVGPOST=0.9995;RSQ=0.9810;ERATE=0.0002;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 227443868 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.977;LDAF=0.1259;AVGPOST=0.9971;RSQ=0.9899;ERATE=0.0007;THETA=0.0002;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 227443937 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0361;AVGPOST=0.9996;RSQ=0.9951;ERATE=0.0003;THETA=0.0004;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 227443941 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0047;AVGPOST=0.9987;RSQ=0.8927;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227443973 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.855;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0002;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227444048 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0671;AVGPOST=0.9980;RSQ=0.9867;ERATE=0.0003;THETA=0.0004;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 227444177 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.828;LDAF=0.0030;AVGPOST=0.9992;RSQ=0.8783;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227444296 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5195;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227444416 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0044;AVGPOST=0.9985;RSQ=0.8502;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227444420 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.805;LDAF=0.0049;AVGPOST=0.9984;RSQ=0.8678;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227444457 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2204;AVGPOST=0.9984;RSQ=0.9964;ERATE=0.0004;THETA=0.0003;AC=481;AN=2184 GT:DS:GL:BD 0.22023809 0
1 227444655 . C CAG 996 PASS INDEL;BAVGPOST=0.982;BRSQ=0.691;LDAF=0.0417;AVGPOST=0.9577;RSQ=0.6116;ERATE=0.0045;THETA=0.0009;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 227444690 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0054;AVGPOST=0.9971;RSQ=0.7955;ERATE=0.0005;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227444704 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.3427;AVGPOST=0.9975;RSQ=0.9953;ERATE=0.0006;THETA=0.0003;AC=751;AN=2184 GT:DS:GL:BD 0.34386447 0
1 227444737 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0018;AVGPOST=0.9988;RSQ=0.7084;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227444753 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8448;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227444861 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7460;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227444954 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.619;LDAF=0.0018;AVGPOST=0.9972;RSQ=0.3821;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227444996 MERGED_DEL_2_7530 AATGCCACTGAATTGTACATGTAAAAGTGGTCAAAATGGCAAATTTTGTTATATGTATTTTACCACAATTTTTAAAAATTAGTAAGATATCAAAACCACTGAATTGTATACTTCAAACAGGTGAATTGTTTGGTATGTCAATCATGTCAGTAAAGCTGTTTTAAAACAAAATAGGAAGATGCTGGGCACA ATATTTATAA . . SV;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0205;AVGPOST=0.9989;RSQ=0.9795;ERATE=0.0003;THETA=0.0002;CIEND=-19,134;CIPOS=-88,69;END=227449309;HOMLEN=0;HOMSEQ;SOURCE=BreakDancer_227445001_227449358,E GT:DS:GL:BD 0.02014652 0
1 227445028 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0115;AVGPOST=0.9997;RSQ=0.9875;ERATE=0.0003;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227445082 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227445096 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.1049;AVGPOST=0.9989;RSQ=0.9950;ERATE=0.0003;THETA=0.0002;AC=229;AN=2184 GT:DS:GL:BD 0.10485348 0
1 227445187 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.557;LDAF=0.0023;AVGPOST=0.9968;RSQ=0.4395;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227445204 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.946;LDAF=0.0671;AVGPOST=0.9954;RSQ=0.9742;ERATE=0.0004;THETA=0.0059;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 227445254 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.1862;AVGPOST=0.9956;RSQ=0.9893;ERATE=0.0005;THETA=0.0023;AC=406;AN=2184 GT:DS:GL:BD 0.18589744 0
1 227445327 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0054;AVGPOST=0.9990;RSQ=0.9100;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227445328 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.863;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.7991;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227445354 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4504;ERATE=0.0004;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227445386 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.3292;AVGPOST=0.9955;RSQ=0.9909;ERATE=0.0007;THETA=0.0005;AC=721;AN=2184 GT:DS:GL:BD 0.33012819 0
1 227445387 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.982;LDAF=0.1527;AVGPOST=0.9973;RSQ=0.9909;ERATE=0.0005;THETA=0.0004;AC=332;AN=2184 GT:DS:GL:BD 0.15201466 0
1 227445401 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.697;LDAF=0.0027;AVGPOST=0.9982;RSQ=0.7241;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227445492 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.965;LDAF=0.1516;AVGPOST=0.9968;RSQ=0.9892;ERATE=0.0005;THETA=0.0001;AC=330;AN=2184 GT:DS:GL:BD 0.15109891 0
1 227445518 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0061;AVGPOST=0.9980;RSQ=0.8990;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227445523 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.628;LDAF=0.0019;AVGPOST=0.9991;RSQ=0.7907;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227445574 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.3306;AVGPOST=0.9974;RSQ=0.9949;ERATE=0.0004;THETA=0.0003;AC=723;AN=2184 GT:DS:GL:BD 0.33104396 0
1 227445588 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.802;LDAF=0.0043;AVGPOST=0.9979;RSQ=0.8168;ERATE=0.0002;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227445593 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4536;ERATE=0.0006;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227445649 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9319;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227445678 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0854;AVGPOST=0.9979;RSQ=0.9899;ERATE=0.0006;THETA=0.0006;AC=186;AN=2184 GT:DS:GL:BD 0.08516484 0
1 227445690 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.711;LDAF=0.0029;AVGPOST=0.9976;RSQ=0.7132;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227445699 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.3302;AVGPOST=0.9973;RSQ=0.9946;ERATE=0.0006;THETA=0.0002;AC=723;AN=2184 GT:DS:GL:BD 0.33104396 0
1 227445733 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.985;LDAF=0.6554;AVGPOST=0.9941;RSQ=0.9898;ERATE=0.0004;THETA=0.0003;AC=1432;AN=2184 GT:DS:GL:BD 0.65567768 1
1 227445874 . C CG 1730 PASS INDEL;BAVGPOST=0.994;BRSQ=0.943;LDAF=0.0538;AVGPOST=0.9951;RSQ=0.9643;ERATE=0.0006;THETA=0.0005;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 227446008 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0116;AVGPOST=0.9996;RSQ=0.9858;ERATE=0.0003;THETA=0.0021;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227446127 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6578;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227446272 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.582;LDAF=0.0029;AVGPOST=0.9972;RSQ=0.6375;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227446464 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.694;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7441;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227446475 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.804;LDAF=0.0080;AVGPOST=0.9985;RSQ=0.9113;ERATE=0.0003;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 227446561 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.931;LDAF=0.0355;AVGPOST=0.9975;RSQ=0.9738;ERATE=0.0005;THETA=0.0005;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 227446564 rs57439652 A AT 12323 PASS INDEL;BAVGPOST=0.995;BRSQ=0.977;LDAF=0.1066;AVGPOST=0.9957;RSQ=0.9847;ERATE=0.0005;THETA=0.0003;AC=233;AN=2184 GT:DS:GL:BD 0.10668498 0
1 227446566 . T TG 859 PASS INDEL;BAVGPOST=0.992;BRSQ=0.970;LDAF=0.1129;AVGPOST=0.9924;RSQ=0.9723;ERATE=0.0006;THETA=0.0006;AC=247;AN=2184 GT:DS:GL:BD 0.11309524 0
1 227446607 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.987;LDAF=0.1524;AVGPOST=0.9980;RSQ=0.9934;ERATE=0.0003;THETA=0.0005;AC=333;AN=2184 GT:DS:GL:BD 0.15247253 0
1 227446619 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0037;AVGPOST=0.9996;RSQ=0.9503;ERATE=0.0003;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227446640 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.847;LDAF=0.0132;AVGPOST=0.9918;RSQ=0.8001;ERATE=0.0003;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 227446692 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7496;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227446732 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0095;AVGPOST=0.9991;RSQ=0.9642;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 227446903 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0026;AVGPOST=0.9974;RSQ=0.6050;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227446928 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1067;AVGPOST=0.9979;RSQ=0.9923;ERATE=0.0002;THETA=0.0003;AC=233;AN=2184 GT:DS:GL:BD 0.10668498 0
1 227446937 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1065;AVGPOST=0.9978;RSQ=0.9917;ERATE=0.0003;THETA=0.0006;AC=233;AN=2184 GT:DS:GL:BD 0.10668498 0
1 227446953 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0095;AVGPOST=0.9995;RSQ=0.9787;ERATE=0.0002;THETA=0.0007;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 227447061 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.3306;AVGPOST=0.9979;RSQ=0.9959;ERATE=0.0006;THETA=0.0004;AC=723;AN=2184 GT:DS:GL:BD 0.33104396 0
1 227447187 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.766;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8156;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227447213 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.987;LDAF=0.7362;AVGPOST=0.9970;RSQ=0.9942;ERATE=0.0004;THETA=0.0003;AC=1608;AN=2184 GT:DS:GL:BD 0.73626375 1
1 227447282 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.978;LDAF=0.0349;AVGPOST=0.9987;RSQ=0.9871;ERATE=0.0003;THETA=0.0004;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 227447303 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.3305;AVGPOST=0.9973;RSQ=0.9951;ERATE=0.0006;THETA=0.0002;AC=723;AN=2184 GT:DS:GL:BD 0.33104396 0
1 227447306 . ATTTAG A 717 PASS INDEL;BAVGPOST=0.999;BRSQ=0.798;LDAF=0.0036;AVGPOST=0.9983;RSQ=0.8290;ERATE=0.0004;THETA=0.0001;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227447728 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.985;LDAF=0.1853;AVGPOST=0.9982;RSQ=0.9957;ERATE=0.0003;THETA=0.0004;AC=406;AN=2184 GT:DS:GL:BD 0.18589744 0
1 227447811 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.836;LDAF=0.0099;AVGPOST=0.9962;RSQ=0.8512;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 227447813 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.822;LDAF=0.0093;AVGPOST=0.9982;RSQ=0.9199;ERATE=0.0003;THETA=0.0008;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 227447852 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.3306;AVGPOST=0.9984;RSQ=0.9967;ERATE=0.0005;THETA=0.0007;AC=723;AN=2184 GT:DS:GL:BD 0.33104396 0
1 227447870 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0888;AVGPOST=0.9976;RSQ=0.9888;ERATE=0.0002;THETA=0.0004;AC=194;AN=2184 GT:DS:GL:BD 0.08882784 0
1 227448019 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0013;AVGPOST=0.9998;RSQ=0.9395;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227448098 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0403;AVGPOST=0.9972;RSQ=0.9770;ERATE=0.0003;THETA=0.0002;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 227448256 rs5781478 CAGAA C 31661 PASS INDEL;BAVGPOST=0.977;BRSQ=0.950;LDAF=0.3272;AVGPOST=0.9843;RSQ=0.9722;ERATE=0.0021;THETA=0.0002;AC=720;AN=2184 GT:DS:GL:BD 0.32967034 0
1 227448262 . GAAA G 6910 PASS INDEL;BAVGPOST=0.953;BRSQ=0.887;LDAF=0.2940;AVGPOST=0.9465;RSQ=0.9005;ERATE=0.0063;THETA=0.0002;AC=660;AN=2184 GT:DS:GL:BD 0.30219781 0
1 227448328 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.3310;AVGPOST=0.9984;RSQ=0.9971;ERATE=0.0003;THETA=0.0005;AC=723;AN=2184 GT:DS:GL:BD 0.33104396 0
1 227448375 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0349;AVGPOST=0.9988;RSQ=0.9881;ERATE=0.0003;THETA=0.0005;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 227448391 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227448410 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0046;AVGPOST=0.9984;RSQ=0.8541;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227448484 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0854;AVGPOST=0.9989;RSQ=0.9950;ERATE=0.0003;THETA=0.0005;AC=187;AN=2184 GT:DS:GL:BD 0.08562271 0
1 227448519 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4917;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227448628 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.870;LDAF=0.0043;AVGPOST=0.9981;RSQ=0.8065;ERATE=0.0006;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227448658 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5189;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227448843 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.517;LDAF=0.0120;AVGPOST=0.9901;RSQ=0.6809;ERATE=0.0004;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 227449074 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.760;LDAF=0.0027;AVGPOST=0.9958;RSQ=0.3805;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227449086 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7776;ERATE=0.0002;THETA=0.0037;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227449227 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.3315;AVGPOST=0.9965;RSQ=0.9935;ERATE=0.0004;THETA=0.0003;AC=725;AN=2184 GT:DS:GL:BD 0.33195969 0
1 227449748 . G GA 10344 PASS INDEL;BAVGPOST=0.995;BRSQ=0.982;LDAF=0.1324;AVGPOST=0.9881;RSQ=0.9623;ERATE=0.0020;THETA=0.0005;AC=289;AN=2184 GT:DS:GL:BD 0.13232601 0
1 227449910 rs35707565 A AATG 45059 PASS INDEL;BAVGPOST=0.992;BRSQ=0.982;LDAF=0.3494;AVGPOST=0.9905;RSQ=0.9839;ERATE=0.0019;THETA=0.0004;AC=761;AN=2184 GT:DS:GL:BD 0.34844321 0
1 227449912 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8061;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227449951 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0016;AVGPOST=0.9980;RSQ=0.5262;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227450092 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0329;AVGPOST=0.9990;RSQ=0.9867;ERATE=0.0003;THETA=0.0004;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 227450122 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.5339;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227450144 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.950;LDAF=0.0967;AVGPOST=0.9962;RSQ=0.9820;ERATE=0.0004;THETA=0.0002;AC=210;AN=2184 GT:DS:GL:BD 0.09615385 0
1 227450148 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7238;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227450183 . AC A 29473 PASS INDEL;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.3458;AVGPOST=0.9958;RSQ=0.9925;ERATE=0.0009;THETA=0.0003;AC=755;AN=2184 GT:DS:GL:BD 0.34569597 0
1 227450293 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0076;AVGPOST=0.9980;RSQ=0.8910;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 227450591 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6859;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227450647 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3448;AVGPOST=0.9988;RSQ=0.9975;ERATE=0.0004;THETA=0.0003;AC=754;AN=2184 GT:DS:GL:BD 0.34523809 0
1 227450658 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.834;LDAF=0.0150;AVGPOST=0.9963;RSQ=0.9020;ERATE=0.0003;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 227450726 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.3448;AVGPOST=0.9983;RSQ=0.9968;ERATE=0.0005;THETA=0.0004;AC=754;AN=2184 GT:DS:GL:BD 0.34523809 0
1 227450832 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0869;AVGPOST=0.9972;RSQ=0.9868;ERATE=0.0005;THETA=0.0003;AC=190;AN=2184 GT:DS:GL:BD 0.08699634 0
1 227450859 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0021;AVGPOST=0.9991;RSQ=0.8063;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227450910 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.988;LDAF=0.8336;AVGPOST=0.9902;RSQ=0.9732;ERATE=0.0010;THETA=0.0005;AC=1824;AN=2184 GT:DS:GL:BD 0.83516484 1
1 227450926 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3453;AVGPOST=0.9983;RSQ=0.9966;ERATE=0.0005;THETA=0.0002;AC=754;AN=2184 GT:DS:GL:BD 0.34523809 0
1 227451044 . TATTTA T 588 PASS INDEL;BAVGPOST=0.997;BRSQ=0.802;LDAF=0.0110;AVGPOST=0.9987;RSQ=0.9490;ERATE=0.0003;THETA=0.0024;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227451053 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.810;LDAF=0.0110;AVGPOST=0.9988;RSQ=0.9543;ERATE=0.0003;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227451113 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.760;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.7004;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227451152 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3451;AVGPOST=0.9984;RSQ=0.9968;ERATE=0.0004;THETA=0.0003;AC=754;AN=2184 GT:DS:GL:BD 0.34523809 0
1 227451191 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0057;AVGPOST=0.9996;RSQ=0.9701;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227451236 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.987;LDAF=0.2201;AVGPOST=0.9982;RSQ=0.9955;ERATE=0.0006;THETA=0.0002;AC=481;AN=2184 GT:DS:GL:BD 0.22023809 0
1 227451281 . CA C 1261 PASS INDEL;BAVGPOST=0.995;BRSQ=0.933;LDAF=0.0388;AVGPOST=0.9945;RSQ=0.9380;ERATE=0.0007;THETA=0.0005;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 227451282 . A AT 59 PASS INDEL;BAVGPOST=0.989;BRSQ=0.691;LDAF=0.0296;AVGPOST=0.9929;RSQ=0.9068;ERATE=0.0004;THETA=0.0002;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 227451323 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5621;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227451368 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.2258;AVGPOST=0.9967;RSQ=0.9920;ERATE=0.0005;THETA=0.0003;AC=491;AN=2184 GT:DS:GL:BD 0.22481684 0
1 227451392 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.977;LDAF=0.6561;AVGPOST=0.9819;RSQ=0.9700;ERATE=0.0031;THETA=0.0013;AC=1442;AN=2184 GT:DS:GL:BD 0.66025639 1
1 227451521 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.983;LDAF=0.0595;AVGPOST=0.9979;RSQ=0.9863;ERATE=0.0005;THETA=0.0004;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 227451595 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7359;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227451672 . TTAGTA T 339 PASS INDEL;BAVGPOST=0.999;BRSQ=0.873;LDAF=0.0030;AVGPOST=0.9985;RSQ=0.8034;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227451710 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6737;ERATE=0.0002;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227451736 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9148;ERATE=0.0002;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227451782 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.890;LDAF=0.0129;AVGPOST=0.9956;RSQ=0.8678;ERATE=0.0003;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227451815 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1249;AVGPOST=0.9996;RSQ=0.9985;ERATE=0.0003;THETA=0.0007;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 227452040 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.8420;AVGPOST=0.9987;RSQ=0.9956;ERATE=0.0003;THETA=0.0003;AC=1839;AN=2184 GT:DS:GL:BD 0.84203297 1
1 227452181 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5251;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227452224 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.3082;AVGPOST=0.9989;RSQ=0.9976;ERATE=0.0003;THETA=0.0002;AC=673;AN=2184 GT:DS:GL:BD 0.30815017 0
1 227452359 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8412;AVGPOST=0.9992;RSQ=0.9976;ERATE=0.0003;THETA=0.0002;AC=1837;AN=2184 GT:DS:GL:BD 0.84111720 1
1 227452461 . T TC 160 PASS INDEL;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0031;AVGPOST=0.9984;RSQ=0.7825;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227452590 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227452700 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3450;AVGPOST=1.0000;RSQ=0.9999;ERATE=0.0002;THETA=0.0004;AC=754;AN=2184 GT:DS:GL:BD 0.34523809 0
1 227452751 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3451;AVGPOST=0.9999;RSQ=0.9998;ERATE=0.0002;THETA=0.0006;AC=754;AN=2184 GT:DS:GL:BD 0.34523809 0
1 227452844 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8426;AVGPOST=0.9992;RSQ=0.9979;ERATE=0.0010;THETA=0.0002;AC=1839;AN=2184 GT:DS:GL:BD 0.84203297 1
1 227452952 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0297;AVGPOST=0.9991;RSQ=0.9893;ERATE=0.0003;THETA=0.0002;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 227452963 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0380;AVGPOST=1.0000;RSQ=0.9995;ERATE=0.0002;THETA=0.0006;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 227453130 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.672;LDAF=0.0035;AVGPOST=0.9966;RSQ=0.5995;ERATE=0.0007;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227453131 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.695;LDAF=0.0063;AVGPOST=0.9931;RSQ=0.5724;ERATE=0.0014;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227453280 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.773;LDAF=0.0016;AVGPOST=0.9988;RSQ=0.6917;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227453384 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2205;AVGPOST=0.9989;RSQ=0.9972;ERATE=0.0005;THETA=0.0004;AC=481;AN=2184 GT:DS:GL:BD 0.22023809 0
1 227453407 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.821;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8854;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227453455 . A AC 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6386;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227453568 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0030;AVGPOST=0.9992;RSQ=0.8819;ERATE=0.0002;THETA=0.0027;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227453739 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1247;AVGPOST=0.9992;RSQ=0.9967;ERATE=0.0004;THETA=0.0012;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 227453878 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.987;LDAF=0.1251;AVGPOST=0.9989;RSQ=0.9963;ERATE=0.0004;THETA=0.0003;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 227454071 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2207;AVGPOST=0.9989;RSQ=0.9979;ERATE=0.0003;THETA=0.0002;AC=481;AN=2184 GT:DS:GL:BD 0.22023809 0
1 227454131 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.983;LDAF=0.0665;AVGPOST=0.9993;RSQ=0.9948;ERATE=0.0003;THETA=0.0004;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 227454171 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7425;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227454199 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227454219 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1248;AVGPOST=0.9997;RSQ=0.9987;ERATE=0.0002;THETA=0.0003;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 227454283 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7493;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227454328 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.6667;AVGPOST=0.9980;RSQ=0.9960;ERATE=0.0004;THETA=0.0027;AC=1456;AN=2184 GT:DS:GL:BD 0.66666669 1
1 227454331 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5466;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227454441 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.901;LDAF=0.0087;AVGPOST=0.9989;RSQ=0.9459;ERATE=0.0002;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 227454502 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.3450;AVGPOST=0.9985;RSQ=0.9970;ERATE=0.0005;THETA=0.0004;AC=754;AN=2184 GT:DS:GL:BD 0.34523809 0
1 227454703 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227454727 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1248;AVGPOST=0.9998;RSQ=0.9992;ERATE=0.0002;THETA=0.0004;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 227454766 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.918;LDAF=0.0402;AVGPOST=0.9961;RSQ=0.9591;ERATE=0.0002;THETA=0.0007;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 227454769 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3450;AVGPOST=0.9990;RSQ=0.9981;ERATE=0.0003;THETA=0.0041;AC=754;AN=2184 GT:DS:GL:BD 0.34523809 0
1 227454812 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5298;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227454820 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.1840;AVGPOST=0.9984;RSQ=0.9958;ERATE=0.0003;THETA=0.0004;AC=402;AN=2184 GT:DS:GL:BD 0.18406594 0
1 227454839 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.743;LDAF=0.0088;AVGPOST=0.9942;RSQ=0.7668;ERATE=0.0003;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 227454860 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.979;LDAF=0.2195;AVGPOST=0.9956;RSQ=0.9894;ERATE=0.0009;THETA=0.0006;AC=479;AN=2184 GT:DS:GL:BD 0.21932234 0
1 227454904 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.881;LDAF=0.0640;AVGPOST=0.9952;RSQ=0.9701;ERATE=0.0004;THETA=0.0004;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 227455047 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8118;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227455065 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7853;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227455067 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8495;ERATE=0.0003;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227455092 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1246;AVGPOST=0.9991;RSQ=0.9970;ERATE=0.0004;THETA=0.0006;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 227455124 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7350;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227455138 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0206;AVGPOST=0.9999;RSQ=0.9971;ERATE=0.0002;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 227455144 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0023;AVGPOST=0.9987;RSQ=0.7458;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227455290 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6279;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227455303 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.6976;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227455403 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6305;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227455576 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5421;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227455637 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0101;AVGPOST=0.9980;RSQ=0.9368;ERATE=0.0002;THETA=0.0011;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 227455669 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0086;AVGPOST=0.9990;RSQ=0.9513;ERATE=0.0003;THETA=0.0014;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 227455736 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6894;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227455777 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5959;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227455821 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2791;AVGPOST=0.9984;RSQ=0.9971;ERATE=0.0003;THETA=0.0006;AC=609;AN=2184 GT:DS:GL:BD 0.27884614 0
1 227455903 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5968;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227455916 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3447;AVGPOST=0.9985;RSQ=0.9974;ERATE=0.0005;THETA=0.0010;AC=754;AN=2184 GT:DS:GL:BD 0.34523809 0
1 227455936 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227455990 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6112;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227456027 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0002;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227456065 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0346;AVGPOST=0.9988;RSQ=0.9861;ERATE=0.0003;THETA=0.0010;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 227456083 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.846;LDAF=0.0065;AVGPOST=0.9984;RSQ=0.9033;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227456139 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5377;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227456141 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.0086;AVGPOST=0.9974;RSQ=0.8915;ERATE=0.0002;THETA=0.0009;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 227456145 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4707;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227456157 . TATAA T 170 PASS INDEL;BAVGPOST=0.998;BRSQ=0.920;LDAF=0.0083;AVGPOST=0.9979;RSQ=0.9118;ERATE=0.0003;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 227456159 . TAAATA T 891 PASS INDEL;BAVGPOST=0.998;BRSQ=0.920;LDAF=0.0085;AVGPOST=0.9973;RSQ=0.8828;ERATE=0.0003;THETA=0.0009;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 227456264 . G GTA 1016 PASS INDEL;BAVGPOST=0.988;BRSQ=0.648;LDAF=0.0206;AVGPOST=0.9904;RSQ=0.8352;ERATE=0.0010;THETA=0.0008;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 227456277 . GTA G 7281 PASS INDEL;BAVGPOST=0.968;BRSQ=0.880;LDAF=0.1696;AVGPOST=0.9228;RSQ=0.8040;ERATE=0.0105;THETA=0.0003;AC=326;AN=2184 GT:DS:GL:BD 0.14926741 0
1 227456300 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0105;AVGPOST=0.9930;RSQ=0.7433;ERATE=0.0006;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 227456323 . A AG 1048 PASS INDEL;BAVGPOST=0.925;BRSQ=0.484;LDAF=0.1003;AVGPOST=0.9055;RSQ=0.5893;ERATE=0.0112;THETA=0.0005;AC=163;AN=2184 GT:DS:GL:BD 0.07463370 0
1 227456334 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.959;BRSQ=0.875;LDAF=0.7824;AVGPOST=0.9080;RSQ=0.8026;ERATE=0.0106;THETA=0.0005;AC=1749;AN=2184 GT:DS:GL:BD 0.80082417 1
1 227456353 . GTA G 720 PASS INDEL;BAVGPOST=0.899;BRSQ=0.362;LDAF=0.1315;AVGPOST=0.8518;RSQ=0.4727;ERATE=0.0187;THETA=0.0004;AC=182;AN=2184 GT:DS:GL:BD 0.08333334 0
1 227456355 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.921;BRSQ=0.733;LDAF=0.2232;AVGPOST=0.8644;RSQ=0.6873;ERATE=0.0202;THETA=0.0004;AC=418;AN=2184 GT:DS:GL:BD 0.19139194 0
1 227456366 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0867;AVGPOST=0.9968;RSQ=0.9850;ERATE=0.0003;THETA=0.0012;AC=187;AN=2184 GT:DS:GL:BD 0.08562271 0
1 227456380 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.962;LDAF=0.2200;AVGPOST=0.9862;RSQ=0.9696;ERATE=0.0018;THETA=0.0006;AC=477;AN=2184 GT:DS:GL:BD 0.21840659 0
1 227456392 . CT C 6170 PASS INDEL;BAVGPOST=0.960;BRSQ=0.895;LDAF=0.2471;AVGPOST=0.9059;RSQ=0.8132;ERATE=0.0131;THETA=0.0003;AC=502;AN=2184 GT:DS:GL:BD 0.22985348 0
1 227456453 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.2174;AVGPOST=0.9947;RSQ=0.9881;ERATE=0.0003;THETA=0.0021;AC=475;AN=2184 GT:DS:GL:BD 0.21749084 0
1 227456479 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.962;LDAF=0.1836;AVGPOST=0.9951;RSQ=0.9888;ERATE=0.0004;THETA=0.0002;AC=403;AN=2184 GT:DS:GL:BD 0.18452381 0
1 227456496 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.955;LDAF=0.3367;AVGPOST=0.9763;RSQ=0.9602;ERATE=0.0029;THETA=0.0005;AC=739;AN=2184 GT:DS:GL:BD 0.33836997 0
1 227456550 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.985;LDAF=0.1828;AVGPOST=0.9973;RSQ=0.9935;ERATE=0.0004;THETA=0.0008;AC=400;AN=2184 GT:DS:GL:BD 0.18315019 0
1 227456579 rs112322843 G GT 13015 PASS INDEL;BAVGPOST=0.930;BRSQ=0.851;LDAF=0.3258;AVGPOST=0.9506;RSQ=0.9173;ERATE=0.0054;THETA=0.0003;AC=724;AN=2184 GT:DS:GL:BD 0.33150184 0
1 227456742 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.770;LDAF=0.0032;AVGPOST=0.9972;RSQ=0.6456;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227456849 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0799;AVGPOST=0.9995;RSQ=0.9969;ERATE=0.0002;THETA=0.0003;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 227456913 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0054;AVGPOST=0.9992;RSQ=0.9465;ERATE=0.0003;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227457023 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9666;ERATE=0.0002;THETA=0.0034;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227457090 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0034;AVGPOST=0.9989;RSQ=0.8490;ERATE=0.0004;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227457098 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0027;AVGPOST=0.9984;RSQ=0.7645;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227457245 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0050;AVGPOST=0.9981;RSQ=0.8467;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227457295 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0384;AVGPOST=0.9991;RSQ=0.9902;ERATE=0.0003;THETA=0.0008;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 227457418 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5756;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227457449 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6428;ERATE=0.0003;THETA=0.0036;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227457595 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3446;AVGPOST=0.9975;RSQ=0.9955;ERATE=0.0006;THETA=0.0004;AC=753;AN=2184 GT:DS:GL:BD 0.34478021 0
1 227457673 . A AT 18 PASS INDEL;BAVGPOST=1.000;BRSQ=0.693;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6314;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227457731 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227457782 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1846;AVGPOST=0.9990;RSQ=0.9975;ERATE=0.0003;THETA=0.0003;AC=402;AN=2184 GT:DS:GL:BD 0.18406594 0
1 227457793 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7222;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227457839 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.729;LDAF=0.0010;AVGPOST=0.9987;RSQ=0.5468;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227457852 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0380;AVGPOST=0.9999;RSQ=0.9985;ERATE=0.0002;THETA=0.0003;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 227457873 . TA T 37 PASS INDEL;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5490;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227457888 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=1.0000;RSQ=0.9957;ERATE=0.0002;THETA=0.0013;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227457892 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.765;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227457936 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227457986 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0116;AVGPOST=0.9996;RSQ=0.9843;ERATE=0.0003;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227457989 . TA T 213 PASS INDEL;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0048;AVGPOST=0.9969;RSQ=0.7583;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227458073 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0322;AVGPOST=0.9986;RSQ=0.9858;ERATE=0.0003;THETA=0.0004;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 227458188 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.710;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4943;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227458314 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1039;AVGPOST=0.9978;RSQ=0.9907;ERATE=0.0003;THETA=0.0003;AC=227;AN=2184 GT:DS:GL:BD 0.10393773 0
1 227458353 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0017;AVGPOST=0.9987;RSQ=0.7063;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227458387 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3461;AVGPOST=0.9988;RSQ=0.9975;ERATE=0.0003;THETA=0.0002;AC=756;AN=2184 GT:DS:GL:BD 0.34615386 0
1 227458413 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7344;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227458425 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0179;AVGPOST=0.9996;RSQ=0.9901;ERATE=0.0003;THETA=0.0007;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 227458430 . T TC 16 PASS INDEL;BAVGPOST=0.999;BRSQ=0.749;LDAF=0.0018;AVGPOST=0.9977;RSQ=0.5659;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227458444 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227458479 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227458761 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5940;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227458869 . T TA 22 PASS INDEL;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6978;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227458960 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.850;LDAF=0.0036;AVGPOST=0.9979;RSQ=0.7604;ERATE=0.0002;THETA=0.0028;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227458968 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.676;LDAF=0.0023;AVGPOST=0.9994;RSQ=0.8769;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227459024 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0117;AVGPOST=0.9994;RSQ=0.9794;ERATE=0.0003;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227459038 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0051;AVGPOST=0.9989;RSQ=0.9006;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227459043 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0019;AVGPOST=0.9982;RSQ=0.6329;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227459063 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0614;AVGPOST=0.9983;RSQ=0.9894;ERATE=0.0003;THETA=0.0020;AC=133;AN=2184 GT:DS:GL:BD 0.06089744 0
1 227459097 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.938;LDAF=0.0275;AVGPOST=0.9981;RSQ=0.9758;ERATE=0.0002;THETA=0.0003;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 227459101 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2213;AVGPOST=0.9985;RSQ=0.9967;ERATE=0.0005;THETA=0.0007;AC=484;AN=2184 GT:DS:GL:BD 0.22161172 0
1 227459144 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0330;AVGPOST=0.9989;RSQ=0.9873;ERATE=0.0002;THETA=0.0003;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 227459224 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.641;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6777;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227459300 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.915;LDAF=0.0207;AVGPOST=0.9979;RSQ=0.9672;ERATE=0.0002;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 227459379 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3455;AVGPOST=0.9983;RSQ=0.9966;ERATE=0.0004;THETA=0.0004;AC=755;AN=2184 GT:DS:GL:BD 0.34569597 0
1 227459381 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6600;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227459413 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6670;AVGPOST=0.9976;RSQ=0.9957;ERATE=0.0003;THETA=0.0002;AC=1456;AN=2184 GT:DS:GL:BD 0.66666669 1
1 227459441 . CTCT C 180 PASS INDEL;BAVGPOST=1.000;BRSQ=0.740;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4609;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227459485 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8303;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227459489 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.697;LDAF=0.0031;AVGPOST=0.9989;RSQ=0.8678;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227459525 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.3461;AVGPOST=0.9968;RSQ=0.9939;ERATE=0.0009;THETA=0.0002;AC=755;AN=2184 GT:DS:GL:BD 0.34569597 0
1 227459572 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0360;AVGPOST=0.9992;RSQ=0.9901;ERATE=0.0003;THETA=0.0004;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 227459585 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5876;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227459621 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.6668;AVGPOST=0.9983;RSQ=0.9965;ERATE=0.0003;THETA=0.0002;AC=1456;AN=2184 GT:DS:GL:BD 0.66666669 1
1 227459742 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0794;AVGPOST=0.9983;RSQ=0.9904;ERATE=0.0004;THETA=0.0006;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 227459780 . CTTTG C 1391 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0131;AVGPOST=0.9965;RSQ=0.9098;ERATE=0.0004;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227460002 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.808;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8373;ERATE=0.0003;THETA=0.0057;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227460082 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4589;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227460123 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0036;AVGPOST=0.9952;RSQ=0.4829;ERATE=0.0007;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227460190 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1250;AVGPOST=0.9994;RSQ=0.9974;ERATE=0.0003;THETA=0.0003;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 227460206 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7645;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227460228 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0031;AVGPOST=0.9989;RSQ=0.8663;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227460268 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0184;AVGPOST=0.9983;RSQ=0.9577;ERATE=0.0004;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 227460338 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0040;AVGPOST=0.9989;RSQ=0.8651;ERATE=0.0004;THETA=0.0001;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227460501 . TA T 81 PASS INDEL;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0035;AVGPOST=0.9985;RSQ=0.8331;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227460506 rs11396756 A AT 22813 PASS INDEL;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3458;AVGPOST=0.9984;RSQ=0.9972;ERATE=0.0003;THETA=0.0006;AC=755;AN=2184 GT:DS:GL:BD 0.34569597 0
1 227460593 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2195;AVGPOST=0.9983;RSQ=0.9962;ERATE=0.0006;THETA=0.0003;AC=479;AN=2184 GT:DS:GL:BD 0.21932234 0
1 227460643 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7148;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227460737 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.987;LDAF=0.3549;AVGPOST=0.9889;RSQ=0.9805;ERATE=0.0015;THETA=0.0003;AC=774;AN=2184 GT:DS:GL:BD 0.35439560 0
1 227460898 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.963;LDAF=0.3348;AVGPOST=0.9851;RSQ=0.9756;ERATE=0.0008;THETA=0.0002;AC=739;AN=2184 GT:DS:GL:BD 0.33836997 0
1 227460998 rs34091853 CA C 4358 PASS INDEL;BAVGPOST=0.997;BRSQ=0.981;LDAF=0.1013;AVGPOST=0.9906;RSQ=0.9617;ERATE=0.0014;THETA=0.0002;AC=219;AN=2184 GT:DS:GL:BD 0.10027473 0
1 227461048 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0040;AVGPOST=0.9992;RSQ=0.9301;ERATE=0.0002;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227461177 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.784;LDAF=0.0042;AVGPOST=0.9987;RSQ=0.8783;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227461256 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.768;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7060;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227461381 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0856;AVGPOST=0.9994;RSQ=0.9966;ERATE=0.0003;THETA=0.0002;AC=187;AN=2184 GT:DS:GL:BD 0.08562271 0
1 227461396 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.896;LDAF=0.0031;AVGPOST=0.9987;RSQ=0.8205;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227461442 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0002;THETA=0.0014;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227461469 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=1.0000;AVGPOST=1.0000;RSQ=0.0500;ERATE=0.0002;THETA=0.0003;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 227461472 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0015;AVGPOST=0.9990;RSQ=0.7508;ERATE=0.0003;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227461510 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6666;AVGPOST=0.9973;RSQ=0.9957;ERATE=0.0005;THETA=0.0003;AC=1455;AN=2184 GT:DS:GL:BD 0.66620880 1
1 227461577 . CA C 43 PASS INDEL;BAVGPOST=0.998;BRSQ=0.547;LDAF=0.0046;AVGPOST=0.9963;RSQ=0.6892;ERATE=0.0007;THETA=0.0012;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227461633 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3455;AVGPOST=0.9958;RSQ=0.9921;ERATE=0.0012;THETA=0.0007;AC=755;AN=2184 GT:DS:GL:BD 0.34569597 0
1 227461644 . TGG T 31 PASS INDEL;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5421;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227461742 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.957;LDAF=0.0537;AVGPOST=0.9945;RSQ=0.9633;ERATE=0.0003;THETA=0.0003;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 227461803 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3465;AVGPOST=0.9965;RSQ=0.9937;ERATE=0.0019;THETA=0.0003;AC=757;AN=2184 GT:DS:GL:BD 0.34661171 0
1 227461890 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0041;AVGPOST=0.9988;RSQ=0.8674;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227462042 . GT G 115 PASS INDEL;BAVGPOST=0.999;BRSQ=0.873;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7873;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227462138 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6347;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227462228 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6334;ERATE=0.0004;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227462271 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.895;LDAF=0.0052;AVGPOST=0.9988;RSQ=0.9043;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227462272 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.851;LDAF=0.0038;AVGPOST=0.9990;RSQ=0.9074;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227462464 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.673;LDAF=0.0076;AVGPOST=0.9968;RSQ=0.8241;ERATE=0.0004;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 227462527 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0028;AVGPOST=0.9971;RSQ=0.6089;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227462729 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4751;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227462747 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3455;AVGPOST=0.9975;RSQ=0.9951;ERATE=0.0007;THETA=0.0008;AC=756;AN=2184 GT:DS:GL:BD 0.34615386 0
1 227462873 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0119;AVGPOST=0.9991;RSQ=0.9667;ERATE=0.0003;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227462881 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.950;LDAF=0.0042;AVGPOST=0.9992;RSQ=0.9143;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227462898 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0049;AVGPOST=0.9993;RSQ=0.9504;ERATE=0.0002;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227462923 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1241;AVGPOST=0.9978;RSQ=0.9921;ERATE=0.0003;THETA=0.0003;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 227462933 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.725;LDAF=0.0080;AVGPOST=0.9960;RSQ=0.7818;ERATE=0.0003;THETA=0.0014;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 227462995 . CAT C 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.738;LDAF=0.0029;AVGPOST=0.9973;RSQ=0.6425;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227463092 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.618;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.5614;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227463179 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7089;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227463233 . TG T 324 PASS INDEL;BAVGPOST=0.717;BRSQ=0.264;LDAF=0.2199;AVGPOST=0.7697;RSQ=0.4756;ERATE=0.0193;THETA=0.0003;AC=364;AN=2184 GT:DS:GL:BD 0.16666667 0
1 227463235 rs71180724 GA G 23527 PASS INDEL;BAVGPOST=0.983;BRSQ=0.963;LDAF=0.6513;AVGPOST=0.9646;RSQ=0.9432;ERATE=0.0027;THETA=0.0013;AC=1434;AN=2184 GT:DS:GL:BD 0.65659338 1
1 227463291 . TC T 249 PASS INDEL;BAVGPOST=0.985;BRSQ=0.757;LDAF=0.0558;AVGPOST=0.9490;RSQ=0.6305;ERATE=0.0026;THETA=0.0005;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 227463352 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.941;LDAF=0.0435;AVGPOST=0.9839;RSQ=0.8595;ERATE=0.0008;THETA=0.0005;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 227463368 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.312;LDAF=0.0030;AVGPOST=0.9972;RSQ=0.6086;ERATE=0.0007;THETA=0.0033;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227463376 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.859;BRSQ=0.282;LDAF=0.2047;AVGPOST=0.7479;RSQ=0.3400;ERATE=0.0323;THETA=0.0004;AC=255;AN=2184 GT:DS:GL:BD 0.11675824 0
1 227463429 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.834;LDAF=0.0483;AVGPOST=0.9796;RSQ=0.8434;ERATE=0.0016;THETA=0.0029;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 227463506 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.2200;AVGPOST=0.9947;RSQ=0.9879;ERATE=0.0008;THETA=0.0003;AC=481;AN=2184 GT:DS:GL:BD 0.22023809 0
1 227463533 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1224;AVGPOST=0.9942;RSQ=0.9802;ERATE=0.0005;THETA=0.0004;AC=269;AN=2184 GT:DS:GL:BD 0.12316850 0
1 227463561 . TC T 182 PASS INDEL;BAVGPOST=0.985;BRSQ=0.391;LDAF=0.0197;AVGPOST=0.9810;RSQ=0.6213;ERATE=0.0017;THETA=0.0010;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 227463574 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1182;AVGPOST=0.9900;RSQ=0.9646;ERATE=0.0005;THETA=0.0009;AC=262;AN=2184 GT:DS:GL:BD 0.11996337 0
1 227463649 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.943;BRSQ=0.829;LDAF=0.1986;AVGPOST=0.9686;RSQ=0.9331;ERATE=0.0015;THETA=0.0007;AC=427;AN=2184 GT:DS:GL:BD 0.19551282 0
1 227463672 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.853;BRSQ=0.629;LDAF=0.2386;AVGPOST=0.8613;RSQ=0.7074;ERATE=0.0078;THETA=0.0004;AC=476;AN=2184 GT:DS:GL:BD 0.21794872 0
1 227463672 . A ACCTCCCAGCCG 2503 PASS INDEL;BAVGPOST=0.853;BRSQ=0.366;LDAF=0.1455;AVGPOST=0.8570;RSQ=0.5583;ERATE=0.0092;THETA=0.0006;AC=250;AN=2184 GT:DS:GL:BD 0.11446887 0
1 227463685 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.847;BRSQ=0.660;LDAF=0.2859;AVGPOST=0.8123;RSQ=0.6246;ERATE=0.0221;THETA=0.0008;AC=580;AN=2184 GT:DS:GL:BD 0.26556778 0
1 227463696 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.957;BRSQ=0.872;LDAF=0.2098;AVGPOST=0.9811;RSQ=0.9558;ERATE=0.0005;THETA=0.0012;AC=460;AN=2184 GT:DS:GL:BD 0.21062271 0
1 227463702 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.931;BRSQ=0.510;LDAF=0.1072;AVGPOST=0.8864;RSQ=0.5283;ERATE=0.0205;THETA=0.0011;AC=144;AN=2184 GT:DS:GL:BD 0.06593407 0
1 227463781 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.919;LDAF=0.2287;AVGPOST=0.9504;RSQ=0.8916;ERATE=0.0053;THETA=0.0008;AC=488;AN=2184 GT:DS:GL:BD 0.22344323 0
1 227463900 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.952;LDAF=0.3424;AVGPOST=0.9758;RSQ=0.9562;ERATE=0.0020;THETA=0.0006;AC=755;AN=2184 GT:DS:GL:BD 0.34569597 0
1 227463919 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.956;LDAF=0.0662;AVGPOST=0.9905;RSQ=0.9464;ERATE=0.0010;THETA=0.0006;AC=138;AN=2184 GT:DS:GL:BD 0.06318682 0
1 227463999 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.314;LDAF=0.0099;AVGPOST=0.9840;RSQ=0.3838;ERATE=0.0009;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227464036 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0432;AVGPOST=0.9906;RSQ=0.9227;ERATE=0.0008;THETA=0.0005;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 227464048 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.953;LDAF=0.0465;AVGPOST=0.9768;RSQ=0.8035;ERATE=0.0014;THETA=0.0025;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 227464092 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.930;BRSQ=0.788;LDAF=0.2079;AVGPOST=0.8713;RSQ=0.7169;ERATE=0.0100;THETA=0.0008;AC=409;AN=2184 GT:DS:GL:BD 0.18727106 0
1 227464106 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.915;LDAF=0.1591;AVGPOST=0.9399;RSQ=0.8173;ERATE=0.0027;THETA=0.0055;AC=331;AN=2184 GT:DS:GL:BD 0.15155677 0
1 227464153 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.983;LDAF=0.0668;AVGPOST=0.9963;RSQ=0.9749;ERATE=0.0006;THETA=0.0006;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 227464179 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.934;LDAF=0.2288;AVGPOST=0.9875;RSQ=0.9737;ERATE=0.0008;THETA=0.0011;AC=498;AN=2184 GT:DS:GL:BD 0.22802198 0
1 227464340 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.985;LDAF=0.2202;AVGPOST=0.9976;RSQ=0.9941;ERATE=0.0005;THETA=0.0007;AC=481;AN=2184 GT:DS:GL:BD 0.22023809 0
1 227464351 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1283;AVGPOST=0.9947;RSQ=0.9835;ERATE=0.0005;THETA=0.0007;AC=280;AN=2184 GT:DS:GL:BD 0.12820514 0
1 227464391 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0327;AVGPOST=0.9993;RSQ=0.9899;ERATE=0.0003;THETA=0.0005;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 227464625 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.974;LDAF=0.1843;AVGPOST=0.9978;RSQ=0.9939;ERATE=0.0005;THETA=0.0005;AC=402;AN=2184 GT:DS:GL:BD 0.18406594 0
1 227464748 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.978;LDAF=0.0370;AVGPOST=0.9969;RSQ=0.9637;ERATE=0.0006;THETA=0.0004;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 227464932 rs59251809 C CCAA 37927 PASS INDEL;BAVGPOST=0.991;BRSQ=0.981;LDAF=0.3415;AVGPOST=0.9941;RSQ=0.9892;ERATE=0.0012;THETA=0.0006;AC=747;AN=2184 GT:DS:GL:BD 0.34203297 0
1 227464954 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1246;AVGPOST=0.9986;RSQ=0.9950;ERATE=0.0004;THETA=0.0002;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 227464960 . C CT 559 PASS INDEL;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0059;AVGPOST=0.9989;RSQ=0.9129;ERATE=0.0004;THETA=0.0012;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227465044 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1288;AVGPOST=0.9968;RSQ=0.9898;ERATE=0.0005;THETA=0.0006;AC=282;AN=2184 GT:DS:GL:BD 0.12912089 0
1 227465064 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6513;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227465067 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9013;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227465190 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3448;AVGPOST=0.9974;RSQ=0.9948;ERATE=0.0008;THETA=0.0004;AC=754;AN=2184 GT:DS:GL:BD 0.34523809 0
1 227465196 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227465246 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0865;AVGPOST=0.9986;RSQ=0.9928;ERATE=0.0005;THETA=0.0002;AC=189;AN=2184 GT:DS:GL:BD 0.08653846 0
1 227465428 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0120;AVGPOST=0.9994;RSQ=0.9769;ERATE=0.0003;THETA=0.0002;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 227465450 . TTTTG T 2004 PASS INDEL;BAVGPOST=0.990;BRSQ=0.919;LDAF=0.0660;AVGPOST=0.9954;RSQ=0.9682;ERATE=0.0008;THETA=0.0003;AC=144;AN=2184 GT:DS:GL:BD 0.06593407 0
1 227465458 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.971;LDAF=0.0327;AVGPOST=0.9994;RSQ=0.9910;ERATE=0.0003;THETA=0.0005;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 227465466 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.943;LDAF=0.3151;AVGPOST=0.9788;RSQ=0.9656;ERATE=0.0005;THETA=0.0003;AC=688;AN=2184 GT:DS:GL:BD 0.31501833 0
1 227465555 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.872;LDAF=0.0089;AVGPOST=0.9986;RSQ=0.9272;ERATE=0.0006;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 227465624 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0364;AVGPOST=0.9988;RSQ=0.9830;ERATE=0.0004;THETA=0.0002;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 227465640 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9241;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227465660 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1842;AVGPOST=0.9992;RSQ=0.9977;ERATE=0.0004;THETA=0.0005;AC=402;AN=2184 GT:DS:GL:BD 0.18406594 0
1 227465679 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.716;LDAF=0.0028;AVGPOST=0.9994;RSQ=0.9107;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227465729 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.936;LDAF=0.0348;AVGPOST=0.9959;RSQ=0.9545;ERATE=0.0006;THETA=0.0008;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 227465758 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.903;LDAF=0.0095;AVGPOST=0.9975;RSQ=0.9015;ERATE=0.0002;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 227465892 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1842;AVGPOST=0.9979;RSQ=0.9943;ERATE=0.0007;THETA=0.0003;AC=401;AN=2184 GT:DS:GL:BD 0.18360806 0
1 227465987 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2218;AVGPOST=0.9975;RSQ=0.9948;ERATE=0.0005;THETA=0.0003;AC=484;AN=2184 GT:DS:GL:BD 0.22161172 0
1 227466026 . TTAAA T 1549 PASS INDEL;BAVGPOST=0.998;BRSQ=0.807;LDAF=0.0059;AVGPOST=0.9982;RSQ=0.8824;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227466136 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5493;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227466216 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0187;AVGPOST=0.9994;RSQ=0.9839;ERATE=0.0003;THETA=0.0003;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 227466368 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3456;AVGPOST=0.9979;RSQ=0.9959;ERATE=0.0004;THETA=0.0005;AC=754;AN=2184 GT:DS:GL:BD 0.34523809 0
1 227466383 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1142;AVGPOST=0.9982;RSQ=0.9915;ERATE=0.0002;THETA=0.0003;AC=249;AN=2184 GT:DS:GL:BD 0.11401099 0
1 227466445 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0027;AVGPOST=0.9989;RSQ=0.8217;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227466486 . GC G 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.720;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4490;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227466520 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3442;AVGPOST=0.9986;RSQ=0.9971;ERATE=0.0003;THETA=0.0004;AC=752;AN=2184 GT:DS:GL:BD 0.34432235 0
1 227466576 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0111;AVGPOST=0.9989;RSQ=0.9610;ERATE=0.0003;THETA=0.0010;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227466582 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.641;LDAF=0.0143;AVGPOST=0.9843;RSQ=0.5683;ERATE=0.0031;THETA=0.0007;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 227466598 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0384;AVGPOST=0.9991;RSQ=0.9909;ERATE=0.0003;THETA=0.0004;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 227466682 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5123;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227466714 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0591;AVGPOST=0.9985;RSQ=0.9899;ERATE=0.0005;THETA=0.0003;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 227466812 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9767;ERATE=0.0002;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227466816 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6616;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227466843 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227466981 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6397;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227467062 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5321;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227467110 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0162;AVGPOST=0.9984;RSQ=0.9654;ERATE=0.0004;THETA=0.0002;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 227467149 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.941;LDAF=0.0114;AVGPOST=0.9963;RSQ=0.8858;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 227467206 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.704;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.5756;ERATE=0.0006;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227467234 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.957;LDAF=0.1814;AVGPOST=0.9930;RSQ=0.9833;ERATE=0.0006;THETA=0.0007;AC=395;AN=2184 GT:DS:GL:BD 0.18086080 0
1 227467247 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.984;LDAF=0.0984;AVGPOST=0.9966;RSQ=0.9846;ERATE=0.0006;THETA=0.0004;AC=215;AN=2184 GT:DS:GL:BD 0.09844323 0
1 227467282 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.817;LDAF=0.0046;AVGPOST=0.9981;RSQ=0.8156;ERATE=0.0005;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227467311 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.734;LDAF=0.0028;AVGPOST=0.9968;RSQ=0.5401;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227467442 . TCA T 52 PASS INDEL;BAVGPOST=0.997;BRSQ=0.650;LDAF=0.0092;AVGPOST=0.9901;RSQ=0.5515;ERATE=0.0026;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227467467 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0382;AVGPOST=0.9995;RSQ=0.9946;ERATE=0.0003;THETA=0.0006;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 227467468 . TG T 813 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9829;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227467480 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5790;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227467532 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0877;AVGPOST=0.9973;RSQ=0.9869;ERATE=0.0004;THETA=0.0003;AC=190;AN=2184 GT:DS:GL:BD 0.08699634 0
1 227467537 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.957;LDAF=0.2193;AVGPOST=0.9973;RSQ=0.9933;ERATE=0.0005;THETA=0.0007;AC=479;AN=2184 GT:DS:GL:BD 0.21932234 0
1 227467584 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0671;AVGPOST=0.9976;RSQ=0.9849;ERATE=0.0007;THETA=0.0003;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 227467613 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.658;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.4748;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227467652 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0327;AVGPOST=0.9995;RSQ=0.9930;ERATE=0.0003;THETA=0.0003;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 227467669 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0027;AVGPOST=0.9989;RSQ=0.8221;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227467708 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227467712 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227467766 . A AC 154 PASS INDEL;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0052;AVGPOST=0.9996;RSQ=0.9627;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227467831 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7712;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227467920 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.3442;AVGPOST=0.9977;RSQ=0.9956;ERATE=0.0004;THETA=0.0007;AC=752;AN=2184 GT:DS:GL:BD 0.34432235 0
1 227467934 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.808;LDAF=0.0056;AVGPOST=0.9989;RSQ=0.9339;ERATE=0.0002;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227467951 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6230;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227468208 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1241;AVGPOST=0.9991;RSQ=0.9965;ERATE=0.0004;THETA=0.0001;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 227468463 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1238;AVGPOST=0.9995;RSQ=0.9982;ERATE=0.0002;THETA=0.0001;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 227468506 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8453;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227468612 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0122;AVGPOST=0.9990;RSQ=0.9710;ERATE=0.0003;THETA=0.0007;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 227468662 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6765;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227468794 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0381;AVGPOST=0.9996;RSQ=0.9957;ERATE=0.0003;THETA=0.0001;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 227468798 . TG T 110 PASS INDEL;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5796;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227468944 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0586;AVGPOST=0.9995;RSQ=0.9964;ERATE=0.0002;THETA=0.0003;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 227468945 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0983;AVGPOST=0.9992;RSQ=0.9964;ERATE=0.0003;THETA=0.0004;AC=215;AN=2184 GT:DS:GL:BD 0.09844323 0
1 227468978 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0031;AVGPOST=0.9979;RSQ=0.7146;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227469049 . CA C 894 PASS INDEL;BAVGPOST=0.937;BRSQ=0.793;LDAF=0.1628;AVGPOST=0.9241;RSQ=0.8099;ERATE=0.0029;THETA=0.0006;AC=357;AN=2184 GT:DS:GL:BD 0.16346154 0
1 227469050 rs78187137 AG A 19700 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1795;AVGPOST=0.9918;RSQ=0.9818;ERATE=0.0005;THETA=0.0006;AC=393;AN=2184 GT:DS:GL:BD 0.17994505 0
1 227469053 . GA G 1368 PASS INDEL;BAVGPOST=0.943;BRSQ=0.819;LDAF=0.1504;AVGPOST=0.9596;RSQ=0.9004;ERATE=0.0003;THETA=0.0006;AC=340;AN=2184 GT:DS:GL:BD 0.15567766 0
1 227469132 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.894;LDAF=0.0121;AVGPOST=0.9988;RSQ=0.9565;ERATE=0.0003;THETA=0.0008;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 227469249 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0333;AVGPOST=0.9981;RSQ=0.9817;ERATE=0.0003;THETA=0.0002;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 227469296 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0031;AVGPOST=0.9979;RSQ=0.7357;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227469357 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.4226;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227469370 . CCCAACCACTAG C 3212 PASS INDEL;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0164;AVGPOST=0.9977;RSQ=0.9508;ERATE=0.0003;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 227469397 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.757;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.5967;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227469443 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0002;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227469477 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3446;AVGPOST=0.9979;RSQ=0.9958;ERATE=0.0005;THETA=0.0005;AC=752;AN=2184 GT:DS:GL:BD 0.34432235 0
1 227469549 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1049;AVGPOST=0.9978;RSQ=0.9895;ERATE=0.0004;THETA=0.0003;AC=228;AN=2184 GT:DS:GL:BD 0.10439561 0
1 227469641 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.941;LDAF=0.0113;AVGPOST=0.9972;RSQ=0.9029;ERATE=0.0005;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227469681 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.952;LDAF=0.1251;AVGPOST=0.9970;RSQ=0.9883;ERATE=0.0006;THETA=0.0014;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 227469683 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.771;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.4205;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227469720 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.590;LDAF=0.0027;AVGPOST=0.9959;RSQ=0.3950;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227469829 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0034;AVGPOST=0.9947;RSQ=0.4043;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227469845 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0062;AVGPOST=0.9979;RSQ=0.8715;ERATE=0.0004;THETA=0.0011;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227469938 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9289;ERATE=0.0004;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227469954 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7577;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227470011 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2251;AVGPOST=0.9988;RSQ=0.9971;ERATE=0.0003;THETA=0.0002;AC=491;AN=2184 GT:DS:GL:BD 0.22481684 0
1 227470060 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.845;LDAF=0.0033;AVGPOST=0.9993;RSQ=0.9122;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227470432 . C CT 143 PASS INDEL;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5295;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227470459 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0018;AVGPOST=0.9977;RSQ=0.5077;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227470471 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6920;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227470637 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0029;AVGPOST=0.9981;RSQ=0.7321;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227470652 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3442;AVGPOST=0.9985;RSQ=0.9970;ERATE=0.0005;THETA=0.0005;AC=752;AN=2184 GT:DS:GL:BD 0.34432235 0
1 227470699 rs113568561 TTATA T 13748 PASS INDEL;BAVGPOST=0.995;BRSQ=0.979;LDAF=0.1240;AVGPOST=0.9982;RSQ=0.9926;ERATE=0.0006;THETA=0.0005;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 227470746 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.2194;AVGPOST=0.9993;RSQ=0.9982;ERATE=0.0003;THETA=0.0007;AC=479;AN=2184 GT:DS:GL:BD 0.21932234 0
1 227470839 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.988;LDAF=0.3434;AVGPOST=0.9957;RSQ=0.9919;ERATE=0.0007;THETA=0.0004;AC=750;AN=2184 GT:DS:GL:BD 0.34340659 0
1 227471020 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.5858;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227471053 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0022;AVGPOST=0.9979;RSQ=0.6557;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227471224 . CTATAAT C 162 PASS INDEL;BAVGPOST=1.000;BRSQ=0.731;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.5754;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227471340 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1836;AVGPOST=0.9991;RSQ=0.9975;ERATE=0.0004;THETA=0.0003;AC=400;AN=2184 GT:DS:GL:BD 0.18315019 0
1 227471341 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2239;AVGPOST=0.9977;RSQ=0.9947;ERATE=0.0004;THETA=0.0007;AC=487;AN=2184 GT:DS:GL:BD 0.22298534 0
1 227471403 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9480;ERATE=0.0002;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227471449 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3442;AVGPOST=0.9988;RSQ=0.9974;ERATE=0.0004;THETA=0.0003;AC=752;AN=2184 GT:DS:GL:BD 0.34432235 0
1 227471533 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.677;LDAF=0.0053;AVGPOST=0.9970;RSQ=0.7628;ERATE=0.0004;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227471554 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2245;AVGPOST=0.9988;RSQ=0.9969;ERATE=0.0005;THETA=0.0007;AC=489;AN=2184 GT:DS:GL:BD 0.22390109 0
1 227471595 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0061;AVGPOST=0.9995;RSQ=0.9604;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227471621 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.714;LDAF=0.0018;AVGPOST=0.9981;RSQ=0.5860;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227471627 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7032;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227471628 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0106;AVGPOST=0.9982;RSQ=0.9269;ERATE=0.0006;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 227471650 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.966;LDAF=0.0372;AVGPOST=0.9979;RSQ=0.9778;ERATE=0.0005;THETA=0.0026;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 227471712 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5579;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227471715 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0029;AVGPOST=0.9988;RSQ=0.8117;ERATE=0.0005;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227471771 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.960;BRSQ=0.923;LDAF=0.3314;AVGPOST=0.9840;RSQ=0.9722;ERATE=0.0005;THETA=0.0002;AC=728;AN=2184 GT:DS:GL:BD 0.33333334 0
1 227471772 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.962;BRSQ=0.905;LDAF=0.2064;AVGPOST=0.9850;RSQ=0.9679;ERATE=0.0003;THETA=0.0004;AC=455;AN=2184 GT:DS:GL:BD 0.20833333 0
1 227471820 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.6660;AVGPOST=0.9987;RSQ=0.9976;ERATE=0.0002;THETA=0.0002;AC=1454;AN=2184 GT:DS:GL:BD 0.66575092 1
1 227471880 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5222;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227471891 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2197;AVGPOST=0.9989;RSQ=0.9971;ERATE=0.0005;THETA=0.0002;AC=480;AN=2184 GT:DS:GL:BD 0.21978022 0
1 227471911 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0024;AVGPOST=0.9984;RSQ=0.6981;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227471915 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1251;AVGPOST=0.9990;RSQ=0.9960;ERATE=0.0004;THETA=0.0004;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 227472016 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0057;AVGPOST=0.9995;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227472113 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3449;AVGPOST=0.9982;RSQ=0.9965;ERATE=0.0004;THETA=0.0004;AC=753;AN=2184 GT:DS:GL:BD 0.34478021 0
1 227472141 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.828;LDAF=0.0025;AVGPOST=0.9992;RSQ=0.8594;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227472213 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0809;AVGPOST=0.9996;RSQ=0.9978;ERATE=0.0003;THETA=0.0004;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 227472255 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9882;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227472520 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227472619 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3446;AVGPOST=0.9976;RSQ=0.9953;ERATE=0.0004;THETA=0.0004;AC=753;AN=2184 GT:DS:GL:BD 0.34478021 0
1 227472635 rs71559808 CA C 15195 PASS INDEL;BAVGPOST=0.986;BRSQ=0.961;LDAF=0.2223;AVGPOST=0.9760;RSQ=0.9486;ERATE=0.0041;THETA=0.0003;AC=484;AN=2184 GT:DS:GL:BD 0.22161172 0
1 227472644 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.702;LDAF=0.0058;AVGPOST=0.9943;RSQ=0.6227;ERATE=0.0007;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227472645 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1541;AVGPOST=0.9975;RSQ=0.9910;ERATE=0.0004;THETA=0.0007;AC=335;AN=2184 GT:DS:GL:BD 0.15338828 0
1 227472664 . AC A 18815 PASS INDEL;BAVGPOST=0.976;BRSQ=0.958;LDAF=0.6527;AVGPOST=0.9728;RSQ=0.9557;ERATE=0.0033;THETA=0.0003;AC=1436;AN=2184 GT:DS:GL:BD 0.65750915 1
1 227472665 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.964;BRSQ=0.930;LDAF=0.6382;AVGPOST=0.9489;RSQ=0.9182;ERATE=0.0080;THETA=0.0006;AC=1413;AN=2184 GT:DS:GL:BD 0.64697802 1
1 227472678 . AT A 27709 PASS INDEL;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6624;AVGPOST=0.9911;RSQ=0.9840;ERATE=0.0011;THETA=0.0003;AC=1452;AN=2184 GT:DS:GL:BD 0.66483516 1
1 227472679 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.981;LDAF=0.6622;AVGPOST=0.9915;RSQ=0.9843;ERATE=0.0011;THETA=0.0005;AC=1449;AN=2184 GT:DS:GL:BD 0.66346157 1
1 227472737 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0119;AVGPOST=0.9990;RSQ=0.9767;ERATE=0.0003;THETA=0.0008;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227472746 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5979;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227472789 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7417;ERATE=0.0002;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227472935 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3443;AVGPOST=0.9990;RSQ=0.9980;ERATE=0.0003;THETA=0.0030;AC=752;AN=2184 GT:DS:GL:BD 0.34432235 0
1 227472964 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3443;AVGPOST=0.9982;RSQ=0.9966;ERATE=0.0004;THETA=0.0006;AC=752;AN=2184 GT:DS:GL:BD 0.34432235 0
1 227473010 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227473132 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6012;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227473403 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0664;AVGPOST=0.9996;RSQ=0.9973;ERATE=0.0003;THETA=0.0005;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 227473444 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.1835;AVGPOST=0.9996;RSQ=0.9990;ERATE=0.0003;THETA=0.0002;AC=400;AN=2184 GT:DS:GL:BD 0.18315019 0
1 227473536 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=1.0000;RSQ=0.9941;ERATE=0.0002;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227473552 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1248;AVGPOST=0.9999;RSQ=0.9996;ERATE=0.0002;THETA=0.0004;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 227473576 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6100;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227473691 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8290;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227473763 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7424;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227473787 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6724;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227473852 . CCTT C 435 PASS INDEL;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0153;AVGPOST=0.9979;RSQ=0.9552;ERATE=0.0004;THETA=0.0017;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 227473853 . CTTCT C 2701 PASS INDEL;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0161;AVGPOST=0.9988;RSQ=0.9750;ERATE=0.0002;THETA=0.0002;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 227473994 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9449;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227473995 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9361;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227474059 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6808;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227474065 . T TCCTA 1609 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=0.9983;RSQ=0.9226;ERATE=0.0003;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227474152 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7921;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227474186 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5642;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227474283 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1247;AVGPOST=0.9996;RSQ=0.9986;ERATE=0.0003;THETA=0.0003;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 227474348 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3442;AVGPOST=0.9987;RSQ=0.9977;ERATE=0.0003;THETA=0.0004;AC=751;AN=2184 GT:DS:GL:BD 0.34386447 0
1 227474416 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9880;ERATE=0.0002;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227474448 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9031;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227474480 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0050;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227474547 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6002;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227474552 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6964;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227474556 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1247;AVGPOST=1.0000;RSQ=0.9998;ERATE=0.0002;THETA=0.0004;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 227474586 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0182;AVGPOST=0.9992;RSQ=0.9804;ERATE=0.0003;THETA=0.0006;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 227474637 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9822;ERATE=0.0002;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227474665 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6659;AVGPOST=0.9985;RSQ=0.9972;ERATE=0.0003;THETA=0.0004;AC=1454;AN=2184 GT:DS:GL:BD 0.66575092 1
1 227474710 . G GA 14486 PASS INDEL;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.3439;AVGPOST=0.9975;RSQ=0.9964;ERATE=0.0003;THETA=0.0004;AC=751;AN=2184 GT:DS:GL:BD 0.34386447 0
1 227474712 rs112992311 A AC 45461 PASS INDEL;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.3437;AVGPOST=0.9976;RSQ=0.9957;ERATE=0.0004;THETA=0.0004;AC=751;AN=2184 GT:DS:GL:BD 0.34386447 0
1 227474795 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5969;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227474984 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0034;AVGPOST=0.9997;RSQ=0.9551;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227475157 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.988;LDAF=0.1244;AVGPOST=0.9984;RSQ=0.9941;ERATE=0.0005;THETA=0.0002;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 227475295 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.845;LDAF=0.0099;AVGPOST=0.9961;RSQ=0.8639;ERATE=0.0004;THETA=0.0008;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 227475411 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6523;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227475703 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0111;AVGPOST=0.9966;RSQ=0.8723;ERATE=0.0004;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 227475725 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2195;AVGPOST=0.9996;RSQ=0.9991;ERATE=0.0003;THETA=0.0004;AC=479;AN=2184 GT:DS:GL:BD 0.21932234 0
1 227475934 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1834;AVGPOST=0.9994;RSQ=0.9983;ERATE=0.0004;THETA=0.0005;AC=400;AN=2184 GT:DS:GL:BD 0.18315019 0
1 227475959 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3436;AVGPOST=0.9985;RSQ=0.9972;ERATE=0.0004;THETA=0.0003;AC=750;AN=2184 GT:DS:GL:BD 0.34340659 0
1 227476031 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.909;LDAF=0.0292;AVGPOST=0.9990;RSQ=0.9856;ERATE=0.0003;THETA=0.0004;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 227476117 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5286;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227476124 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7384;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227476128 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.851;LDAF=0.0235;AVGPOST=0.9927;RSQ=0.8903;ERATE=0.0002;THETA=0.0002;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 227476168 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4831;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227476172 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3429;AVGPOST=0.9967;RSQ=0.9933;ERATE=0.0008;THETA=0.0001;AC=748;AN=2184 GT:DS:GL:BD 0.34249085 0
1 227476257 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.683;LDAF=0.0032;AVGPOST=0.9963;RSQ=0.5780;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227476260 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.959;BRSQ=0.842;LDAF=0.1228;AVGPOST=0.9868;RSQ=0.9579;ERATE=0.0005;THETA=0.0003;AC=266;AN=2184 GT:DS:GL:BD 0.12179487 0
1 227476311 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.945;LDAF=0.3402;AVGPOST=0.9911;RSQ=0.9833;ERATE=0.0011;THETA=0.0004;AC=747;AN=2184 GT:DS:GL:BD 0.34203297 0
1 227476396 rs60148126 CA C 15 PASS INDEL;BAVGPOST=0.994;BRSQ=0.416;LDAF=0.0111;AVGPOST=0.9848;RSQ=0.4797;ERATE=0.0017;THETA=0.0001;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 227476427 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.984;LDAF=0.2195;AVGPOST=0.9987;RSQ=0.9967;ERATE=0.0005;THETA=0.0004;AC=479;AN=2184 GT:DS:GL:BD 0.21932234 0
1 227476466 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.981;LDAF=0.1839;AVGPOST=0.9972;RSQ=0.9927;ERATE=0.0005;THETA=0.0004;AC=402;AN=2184 GT:DS:GL:BD 0.18406594 0
1 227476467 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.974;LDAF=0.0691;AVGPOST=0.9942;RSQ=0.9666;ERATE=0.0004;THETA=0.0004;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 227476511 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.797;LDAF=0.0023;AVGPOST=0.9987;RSQ=0.7339;ERATE=0.0006;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227476699 . AAAT A 17847 PASS INDEL;BAVGPOST=0.991;BRSQ=0.973;LDAF=0.1916;AVGPOST=0.9828;RSQ=0.9608;ERATE=0.0035;THETA=0.0003;AC=407;AN=2184 GT:DS:GL:BD 0.18635531 0
1 227476725 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1251;AVGPOST=0.9992;RSQ=0.9968;ERATE=0.0003;THETA=0.0005;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 227476754 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2246;AVGPOST=0.9992;RSQ=0.9980;ERATE=0.0003;THETA=0.0004;AC=489;AN=2184 GT:DS:GL:BD 0.22390109 0
1 227476853 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.898;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8459;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227477189 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7196;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227477227 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0024;AVGPOST=0.9995;RSQ=0.8966;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227477247 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227477253 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1839;AVGPOST=0.9980;RSQ=0.9956;ERATE=0.0003;THETA=0.0002;AC=400;AN=2184 GT:DS:GL:BD 0.18315019 0
1 227477259 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227477285 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9149;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227477306 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3440;AVGPOST=0.9990;RSQ=0.9979;ERATE=0.0003;THETA=0.0004;AC=752;AN=2184 GT:DS:GL:BD 0.34432235 0
1 227477320 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3440;AVGPOST=0.9989;RSQ=0.9976;ERATE=0.0005;THETA=0.0002;AC=752;AN=2184 GT:DS:GL:BD 0.34432235 0
1 227477338 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0361;AVGPOST=0.9998;RSQ=0.9976;ERATE=0.0002;THETA=0.0004;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 227477375 . A AG 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.8015;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227477401 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.810;LDAF=0.0018;AVGPOST=0.9995;RSQ=0.8906;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227477416 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0666;AVGPOST=0.9991;RSQ=0.9949;ERATE=0.0002;THETA=0.0002;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 227477422 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5660;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227477442 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4926;AVGPOST=0.9986;RSQ=0.9974;ERATE=0.0004;THETA=0.0004;AC=1075;AN=2184 GT:DS:GL:BD 0.49221611 0
1 227477445 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0052;AVGPOST=0.9997;RSQ=0.9704;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227477456 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7667;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227477537 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8415;AVGPOST=0.9986;RSQ=0.9954;ERATE=0.0003;THETA=0.0004;AC=1838;AN=2184 GT:DS:GL:BD 0.84157509 1
1 227477762 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5615;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227477786 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1275;AVGPOST=0.9954;RSQ=0.9859;ERATE=0.0003;THETA=0.0003;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 227477876 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7582;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227478028 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2205;AVGPOST=0.9982;RSQ=0.9954;ERATE=0.0004;THETA=0.0002;AC=480;AN=2184 GT:DS:GL:BD 0.21978022 0
1 227478039 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6373;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227478144 . C CT 4572 PASS INDEL;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0329;AVGPOST=0.9992;RSQ=0.9885;ERATE=0.0003;THETA=0.0002;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 227478159 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.867;LDAF=0.0096;AVGPOST=0.9978;RSQ=0.9059;ERATE=0.0004;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 227478219 rs71962247 TAATAG T 25921 PASS INDEL;BAVGPOST=0.992;BRSQ=0.979;LDAF=0.2193;AVGPOST=0.9978;RSQ=0.9944;ERATE=0.0005;THETA=0.0005;AC=479;AN=2184 GT:DS:GL:BD 0.21932234 0
1 227478295 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.5627;ERATE=0.0002;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227478332 . AT A 336 PASS INDEL;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0062;AVGPOST=0.9983;RSQ=0.8793;ERATE=0.0004;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227478429 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.671;LDAF=0.0107;AVGPOST=0.9887;RSQ=0.5818;ERATE=0.0012;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 227478468 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8247;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227478604 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3447;AVGPOST=0.9988;RSQ=0.9980;ERATE=0.0003;THETA=0.0004;AC=752;AN=2184 GT:DS:GL:BD 0.34432235 0
1 227478623 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2194;AVGPOST=0.9989;RSQ=0.9973;ERATE=0.0004;THETA=0.0004;AC=479;AN=2184 GT:DS:GL:BD 0.21932234 0
1 227478779 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0024;AVGPOST=0.9991;RSQ=0.8368;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227478796 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1833;AVGPOST=0.9991;RSQ=0.9975;ERATE=0.0005;THETA=0.0002;AC=400;AN=2184 GT:DS:GL:BD 0.18315019 0
1 227478808 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0667;AVGPOST=0.9990;RSQ=0.9934;ERATE=0.0003;THETA=0.0002;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 227478814 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.8368;AVGPOST=0.9994;RSQ=0.9981;ERATE=0.0003;THETA=0.0003;AC=1827;AN=2184 GT:DS:GL:BD 0.83653843 1
1 227478883 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3447;AVGPOST=0.9975;RSQ=0.9955;ERATE=0.0005;THETA=0.0002;AC=752;AN=2184 GT:DS:GL:BD 0.34432235 0
1 227478884 . CTCCT C 295 PASS INDEL;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0025;AVGPOST=0.9982;RSQ=0.7460;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227478892 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9469;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227478897 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1837;AVGPOST=0.9984;RSQ=0.9959;ERATE=0.0003;THETA=0.0005;AC=400;AN=2184 GT:DS:GL:BD 0.18315019 0
1 227478940 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0059;AVGPOST=0.9989;RSQ=0.9183;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227479078 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0042;AVGPOST=0.9985;RSQ=0.8537;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227479149 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.938;LDAF=0.3327;AVGPOST=0.9890;RSQ=0.9801;ERATE=0.0013;THETA=0.0006;AC=729;AN=2184 GT:DS:GL:BD 0.33379120 0
1 227479181 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.938;LDAF=0.0103;AVGPOST=0.9981;RSQ=0.9324;ERATE=0.0003;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 227479194 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227479258 . AAAACAAAAAC A 2078 PASS INDEL;BAVGPOST=0.985;BRSQ=0.746;LDAF=0.0356;AVGPOST=0.9980;RSQ=0.9740;ERATE=0.0003;THETA=0.0003;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 227479293 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3443;AVGPOST=0.9972;RSQ=0.9947;ERATE=0.0005;THETA=0.0006;AC=754;AN=2184 GT:DS:GL:BD 0.34523809 0
1 227479341 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.899;LDAF=0.0031;AVGPOST=0.9983;RSQ=0.8207;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227479344 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2194;AVGPOST=0.9985;RSQ=0.9962;ERATE=0.0005;THETA=0.0005;AC=479;AN=2184 GT:DS:GL:BD 0.21932234 0
1 227479420 . CCAGTTTGCAT C 13321 PASS INDEL;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0674;AVGPOST=0.9973;RSQ=0.9853;ERATE=0.0004;THETA=0.0003;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 227479534 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0116;AVGPOST=0.9995;RSQ=0.9825;ERATE=0.0003;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227479542 rs57673797 GAAGTT G 7054 PASS INDEL;BAVGPOST=0.994;BRSQ=0.929;LDAF=0.0366;AVGPOST=0.9985;RSQ=0.9839;ERATE=0.0003;THETA=0.0012;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 227479568 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0381;AVGPOST=0.9997;RSQ=0.9971;ERATE=0.0002;THETA=0.0008;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 227479660 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5149;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227479706 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.741;LDAF=0.0025;AVGPOST=0.9973;RSQ=0.5322;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227479707 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.778;LDAF=0.0051;AVGPOST=0.9942;RSQ=0.5755;ERATE=0.0009;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227479747 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5010;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227479839 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0602;AVGPOST=0.9968;RSQ=0.9820;ERATE=0.0004;THETA=0.0003;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 227479847 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.771;LDAF=0.0027;AVGPOST=0.9980;RSQ=0.7079;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227479925 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.709;LDAF=0.0093;AVGPOST=0.9946;RSQ=0.7849;ERATE=0.0004;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 227479962 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.957;LDAF=0.3419;AVGPOST=0.9936;RSQ=0.9878;ERATE=0.0009;THETA=0.0009;AC=749;AN=2184 GT:DS:GL:BD 0.34294870 0
1 227479970 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.945;LDAF=0.1768;AVGPOST=0.9912;RSQ=0.9792;ERATE=0.0005;THETA=0.0003;AC=392;AN=2184 GT:DS:GL:BD 0.17948718 0
1 227480011 rs35810413 G GA 23172 PASS INDEL;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.3461;AVGPOST=0.9943;RSQ=0.9892;ERATE=0.0007;THETA=0.0003;AC=759;AN=2184 GT:DS:GL:BD 0.34752747 0
1 227480090 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0809;AVGPOST=0.9988;RSQ=0.9928;ERATE=0.0003;THETA=0.0003;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 227480162 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3451;AVGPOST=0.9954;RSQ=0.9908;ERATE=0.0011;THETA=0.0004;AC=754;AN=2184 GT:DS:GL:BD 0.34523809 0
1 227480236 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0054;AVGPOST=0.9993;RSQ=0.9400;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227480279 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0017;AVGPOST=0.9996;RSQ=0.9254;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227480430 . TG T 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.765;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5838;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227480483 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9389;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227480494 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3449;AVGPOST=0.9978;RSQ=0.9957;ERATE=0.0005;THETA=0.0010;AC=752;AN=2184 GT:DS:GL:BD 0.34432235 0
1 227480561 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227480723 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0586;AVGPOST=0.9998;RSQ=0.9983;ERATE=0.0003;THETA=0.0004;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 227480797 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.629;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5809;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227480824 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.810;LDAF=0.0023;AVGPOST=0.9979;RSQ=0.6504;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227480836 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.799;LDAF=0.0071;AVGPOST=0.9986;RSQ=0.9166;ERATE=0.0003;THETA=0.0018;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 227480908 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7766;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227480975 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1239;AVGPOST=0.9984;RSQ=0.9940;ERATE=0.0006;THETA=0.0003;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 227481079 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5043;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227481090 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2194;AVGPOST=0.9987;RSQ=0.9968;ERATE=0.0003;THETA=0.0010;AC=479;AN=2184 GT:DS:GL:BD 0.21932234 0
1 227481150 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7957;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227481163 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.905;LDAF=0.0846;AVGPOST=0.9924;RSQ=0.9633;ERATE=0.0003;THETA=0.0005;AC=181;AN=2184 GT:DS:GL:BD 0.08287546 0
1 227481246 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.981;LDAF=0.1548;AVGPOST=0.9944;RSQ=0.9812;ERATE=0.0008;THETA=0.0003;AC=337;AN=2184 GT:DS:GL:BD 0.15430403 0
1 227481383 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.949;LDAF=0.3378;AVGPOST=0.9912;RSQ=0.9836;ERATE=0.0012;THETA=0.0003;AC=741;AN=2184 GT:DS:GL:BD 0.33928570 0
1 227481387 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.960;LDAF=0.3385;AVGPOST=0.9925;RSQ=0.9864;ERATE=0.0006;THETA=0.0006;AC=744;AN=2184 GT:DS:GL:BD 0.34065935 0
1 227481435 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0118;AVGPOST=0.9992;RSQ=0.9734;ERATE=0.0003;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227481496 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.747;LDAF=0.0022;AVGPOST=0.9966;RSQ=0.4800;ERATE=0.0003;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227481581 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9767;ERATE=0.0002;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227481755 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.874;BRSQ=0.695;LDAF=0.2190;AVGPOST=0.9168;RSQ=0.8284;ERATE=0.0009;THETA=0.0001;AC=498;AN=2184 GT:DS:GL:BD 0.22802198 0
1 227481763 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.874;BRSQ=0.695;LDAF=0.2205;AVGPOST=0.9149;RSQ=0.8256;ERATE=0.0010;THETA=0.0003;AC=499;AN=2184 GT:DS:GL:BD 0.22847985 0
1 227481851 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.977;LDAF=0.1516;AVGPOST=0.9959;RSQ=0.9854;ERATE=0.0004;THETA=0.0005;AC=332;AN=2184 GT:DS:GL:BD 0.15201466 0
1 227481890 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.560;LDAF=0.0026;AVGPOST=0.9966;RSQ=0.4402;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227481898 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.539;LDAF=0.0016;AVGPOST=0.9980;RSQ=0.4581;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227481955 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.952;LDAF=0.3385;AVGPOST=0.9895;RSQ=0.9803;ERATE=0.0006;THETA=0.0004;AC=748;AN=2184 GT:DS:GL:BD 0.34249085 0
1 227481972 . C CA 5163 PASS INDEL;BAVGPOST=0.929;BRSQ=0.670;LDAF=0.1711;AVGPOST=0.8473;RSQ=0.5508;ERATE=0.0293;THETA=0.0005;AC=268;AN=2184 GT:DS:GL:BD 0.12271062 0
1 227482005 . CTG C 1190 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0119;AVGPOST=0.9990;RSQ=0.9663;ERATE=0.0004;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227482047 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3444;AVGPOST=0.9984;RSQ=0.9968;ERATE=0.0005;THETA=0.0004;AC=752;AN=2184 GT:DS:GL:BD 0.34432235 0
1 227482057 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0024;AVGPOST=0.9977;RSQ=0.6616;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227482151 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5377;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227482357 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.585;LDAF=0.0071;AVGPOST=0.9920;RSQ=0.5367;ERATE=0.0008;THETA=0.0014;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227482590 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.790;LDAF=0.0186;AVGPOST=0.9888;RSQ=0.7854;ERATE=0.0004;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 227482642 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0219;AVGPOST=0.9982;RSQ=0.9681;ERATE=0.0004;THETA=0.0007;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 227482660 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.5616;ERATE=0.0006;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227482761 . TCTGC T 51 PASS INDEL;BAVGPOST=0.998;BRSQ=0.649;LDAF=0.0066;AVGPOST=0.9947;RSQ=0.6527;ERATE=0.0011;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227482806 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.709;LDAF=0.0090;AVGPOST=0.9957;RSQ=0.8143;ERATE=0.0004;THETA=0.0009;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 227482867 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2181;AVGPOST=0.9971;RSQ=0.9926;ERATE=0.0007;THETA=0.0025;AC=475;AN=2184 GT:DS:GL:BD 0.21749084 0
1 227482935 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2240;AVGPOST=0.9977;RSQ=0.9942;ERATE=0.0005;THETA=0.0005;AC=488;AN=2184 GT:DS:GL:BD 0.22344323 0
1 227483160 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8117;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227483166 rs111688987 T TA 20961 PASS INDEL;BAVGPOST=0.987;BRSQ=0.973;LDAF=0.3403;AVGPOST=0.9894;RSQ=0.9810;ERATE=0.0016;THETA=0.0005;AC=745;AN=2184 GT:DS:GL:BD 0.34111720 0
1 227483174 . A AAT 8826 PASS INDEL;BAVGPOST=0.959;BRSQ=0.844;LDAF=0.1590;AVGPOST=0.9479;RSQ=0.8562;ERATE=0.0056;THETA=0.0004;AC=324;AN=2184 GT:DS:GL:BD 0.14835165 0
1 227483177 . TA T 586 PASS INDEL;BAVGPOST=0.972;BRSQ=0.866;LDAF=0.1083;AVGPOST=0.9840;RSQ=0.9419;ERATE=0.0004;THETA=0.0005;AC=243;AN=2184 GT:DS:GL:BD 0.11126374 0
1 227483178 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.962;LDAF=0.1205;AVGPOST=0.9951;RSQ=0.9831;ERATE=0.0003;THETA=0.0004;AC=266;AN=2184 GT:DS:GL:BD 0.12179487 0
1 227483194 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0363;AVGPOST=0.9992;RSQ=0.9873;ERATE=0.0003;THETA=0.0005;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 227483497 . CAT C 25 PASS INDEL;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.5142;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227483634 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8857;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227483640 . AAC A 59 PASS INDEL;BAVGPOST=0.999;BRSQ=0.771;LDAF=0.0027;AVGPOST=0.9974;RSQ=0.6234;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227483645 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227483675 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227483790 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227483811 . CTT C 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227483881 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0058;AVGPOST=0.9994;RSQ=0.9605;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227483897 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0186;AVGPOST=0.9989;RSQ=0.9772;ERATE=0.0003;THETA=0.0003;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 227483947 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227483982 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227483999 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5213;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227484038 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.6652;AVGPOST=0.9965;RSQ=0.9934;ERATE=0.0007;THETA=0.0004;AC=1453;AN=2184 GT:DS:GL:BD 0.66529304 1
1 227484088 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6945;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227484123 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1052;AVGPOST=0.9984;RSQ=0.9920;ERATE=0.0004;THETA=0.0005;AC=229;AN=2184 GT:DS:GL:BD 0.10485348 0
1 227484205 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.853;LDAF=0.0061;AVGPOST=0.9979;RSQ=0.8603;ERATE=0.0004;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227484235 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.963;LDAF=0.0893;AVGPOST=0.9963;RSQ=0.9811;ERATE=0.0004;THETA=0.0004;AC=195;AN=2184 GT:DS:GL:BD 0.08928572 0
1 227484353 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.670;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.6966;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227484391 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.960;LDAF=0.0376;AVGPOST=0.9971;RSQ=0.9715;ERATE=0.0003;THETA=0.0002;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 227484466 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2195;AVGPOST=0.9987;RSQ=0.9970;ERATE=0.0003;THETA=0.0002;AC=479;AN=2184 GT:DS:GL:BD 0.21932234 0
1 227484482 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6656;AVGPOST=0.9970;RSQ=0.9943;ERATE=0.0007;THETA=0.0008;AC=1454;AN=2184 GT:DS:GL:BD 0.66575092 1
1 227484568 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6236;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227484667 . C CT 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6964;ERATE=0.0003;THETA=0.0045;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227484783 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.727;LDAF=0.0025;AVGPOST=0.9969;RSQ=0.5441;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227484832 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.795;LDAF=0.0033;AVGPOST=0.9984;RSQ=0.8054;ERATE=0.0003;THETA=0.0025;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227484838 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7404;ERATE=0.0002;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227484848 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3440;AVGPOST=0.9986;RSQ=0.9971;ERATE=0.0005;THETA=0.0036;AC=752;AN=2184 GT:DS:GL:BD 0.34432235 0
1 227484917 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1249;AVGPOST=0.9995;RSQ=0.9982;ERATE=0.0002;THETA=0.0002;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 227484931 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6077;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227484992 . GT G 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0028;AVGPOST=0.9986;RSQ=0.7805;ERATE=0.0003;THETA=0.0037;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227485048 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0077;AVGPOST=0.9964;RSQ=0.8431;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 227485113 . GACCC G 6390 PASS INDEL;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0316;AVGPOST=0.9972;RSQ=0.9695;ERATE=0.0003;THETA=0.0003;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 227485146 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227485195 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3441;AVGPOST=0.9993;RSQ=0.9985;ERATE=0.0003;THETA=0.0002;AC=752;AN=2184 GT:DS:GL:BD 0.34432235 0
1 227485233 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0071;AVGPOST=0.9993;RSQ=0.9603;ERATE=0.0003;THETA=0.0008;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 227485477 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.978;LDAF=0.3420;AVGPOST=0.9963;RSQ=0.9931;ERATE=0.0005;THETA=0.0002;AC=750;AN=2184 GT:DS:GL:BD 0.34340659 0
1 227485483 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.975;LDAF=0.3394;AVGPOST=0.9966;RSQ=0.9937;ERATE=0.0006;THETA=0.0003;AC=743;AN=2184 GT:DS:GL:BD 0.34020147 0
1 227485603 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.682;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.5592;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227485606 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.984;LDAF=0.1247;AVGPOST=0.9973;RSQ=0.9895;ERATE=0.0007;THETA=0.0005;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 227485639 . TTA T 4803 PASS INDEL;BAVGPOST=0.989;BRSQ=0.928;LDAF=0.0843;AVGPOST=0.9939;RSQ=0.9674;ERATE=0.0005;THETA=0.0004;AC=188;AN=2184 GT:DS:GL:BD 0.08608059 0
1 227485655 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.873;BRSQ=0.715;LDAF=0.3681;AVGPOST=0.8205;RSQ=0.6778;ERATE=0.0424;THETA=0.0003;AC=739;AN=2184 GT:DS:GL:BD 0.33836997 0
1 227485662 . TAC T 2412 PASS INDEL;BAVGPOST=0.691;BRSQ=0.474;LDAF=0.3984;AVGPOST=0.7327;RSQ=0.5612;ERATE=0.0258;THETA=0.0001;AC=851;AN=2184 GT:DS:GL:BD 0.38965201 0
1 227485670 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.822;BRSQ=0.468;LDAF=0.2655;AVGPOST=0.7848;RSQ=0.4862;ERATE=0.0543;THETA=0.0003;AC=437;AN=2184 GT:DS:GL:BD 0.20009157 0
1 227485688 . TAC T 285 PASS INDEL;BAVGPOST=0.938;BRSQ=0.774;LDAF=0.1731;AVGPOST=0.9250;RSQ=0.7946;ERATE=0.0036;THETA=0.0002;AC=364;AN=2184 GT:DS:GL:BD 0.16666667 0
1 227485762 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0390;AVGPOST=0.9985;RSQ=0.9865;ERATE=0.0003;THETA=0.0003;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 227485888 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3441;AVGPOST=0.9982;RSQ=0.9962;ERATE=0.0006;THETA=0.0003;AC=752;AN=2184 GT:DS:GL:BD 0.34432235 0
1 227485912 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0323;AVGPOST=0.9987;RSQ=0.9856;ERATE=0.0003;THETA=0.0004;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 227486032 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6305;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227486057 rs78547197 A AT 15234 PASS INDEL;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1846;AVGPOST=0.9969;RSQ=0.9917;ERATE=0.0006;THETA=0.0006;AC=400;AN=2184 GT:DS:GL:BD 0.18315019 0
1 227486151 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9154;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227486176 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0144;AVGPOST=0.9993;RSQ=0.9785;ERATE=0.0003;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 227486297 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8351;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227486335 . AGG A 22 PASS INDEL;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4294;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227486370 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0059;AVGPOST=0.9997;RSQ=0.9788;ERATE=0.0003;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227486412 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7887;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227486433 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4307;AVGPOST=0.9992;RSQ=0.9987;ERATE=0.0003;THETA=0.0003;AC=941;AN=2184 GT:DS:GL:BD 0.43086082 0
1 227486486 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0864;AVGPOST=0.9998;RSQ=0.9988;ERATE=0.0002;THETA=0.0003;AC=189;AN=2184 GT:DS:GL:BD 0.08653846 0
1 227486529 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9284;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227486549 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9474;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227486549 . TA T 74 PASS INDEL;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5306;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227486555 . A AG 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6063;ERATE=0.0002;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227486657 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7304;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227486671 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3441;AVGPOST=0.9994;RSQ=0.9987;ERATE=0.0004;THETA=0.0016;AC=752;AN=2184 GT:DS:GL:BD 0.34432235 0
1 227486722 . AAGTG A 38 PASS INDEL;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0025;AVGPOST=0.9978;RSQ=0.6110;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227486921 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.747;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5995;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227486963 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.734;LDAF=0.0027;AVGPOST=0.9981;RSQ=0.6875;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227486971 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1841;AVGPOST=0.9978;RSQ=0.9944;ERATE=0.0006;THETA=0.0004;AC=401;AN=2184 GT:DS:GL:BD 0.18360806 0
1 227487001 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=0.9990;RSQ=0.9495;ERATE=0.0003;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 227487131 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7587;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227487190 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9829;ERATE=0.0002;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227487205 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0042;AVGPOST=0.9989;RSQ=0.8823;ERATE=0.0004;THETA=0.0001;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227487251 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7718;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227487394 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0862;AVGPOST=0.9988;RSQ=0.9944;ERATE=0.0003;THETA=0.0003;AC=189;AN=2184 GT:DS:GL:BD 0.08653846 0
1 227487417 . T TG 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.749;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.7422;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227487434 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9421;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227487457 . TA T 141 PASS INDEL;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7819;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227487464 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.949;LDAF=0.0606;AVGPOST=0.9972;RSQ=0.9813;ERATE=0.0003;THETA=0.0004;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 227487466 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.850;LDAF=0.0025;AVGPOST=0.9984;RSQ=0.7451;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227487493 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5767;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227487544 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0036;AVGPOST=0.9976;RSQ=0.7482;ERATE=0.0006;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227487630 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.625;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7702;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227487784 rs60022667 TTC T 13459 PASS INDEL;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.1306;AVGPOST=0.9894;RSQ=0.9656;ERATE=0.0009;THETA=0.0003;AC=282;AN=2184 GT:DS:GL:BD 0.12912089 0
1 227487905 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0033;AVGPOST=0.9981;RSQ=0.7589;ERATE=0.0003;THETA=0.0001;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227487987 . AC A 45 PASS INDEL;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6936;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227488008 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1051;AVGPOST=0.9986;RSQ=0.9932;ERATE=0.0003;THETA=0.0005;AC=229;AN=2184 GT:DS:GL:BD 0.10485348 0
1 227488076 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5836;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227488089 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0663;AVGPOST=0.9996;RSQ=0.9973;ERATE=0.0003;THETA=0.0002;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 227488127 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8221;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227488138 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3447;AVGPOST=0.9970;RSQ=0.9944;ERATE=0.0004;THETA=0.0004;AC=752;AN=2184 GT:DS:GL:BD 0.34432235 0
1 227488162 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9203;ERATE=0.0002;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227488256 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.844;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7442;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227488310 . G GGGA 284 PASS INDEL;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.6652;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227488343 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0360;AVGPOST=0.9996;RSQ=0.9951;ERATE=0.0003;THETA=0.0003;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 227488358 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.8124;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227488396 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.764;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227488414 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227488599 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6252;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227488791 . TG T 19981 PASS INDEL;BAVGPOST=0.987;BRSQ=0.962;LDAF=0.1781;AVGPOST=0.9943;RSQ=0.9868;ERATE=0.0004;THETA=0.0002;AC=389;AN=2184 GT:DS:GL:BD 0.17811355 0
1 227488802 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3441;AVGPOST=0.9990;RSQ=0.9980;ERATE=0.0003;THETA=0.0003;AC=752;AN=2184 GT:DS:GL:BD 0.34432235 0
1 227488851 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0158;AVGPOST=0.9995;RSQ=0.9886;ERATE=0.0002;THETA=0.0002;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 227489061 . AC A 1224 PASS INDEL;BAVGPOST=0.902;BRSQ=0.695;LDAF=0.1690;AVGPOST=0.9192;RSQ=0.8017;ERATE=0.0059;THETA=0.0004;AC=365;AN=2184 GT:DS:GL:BD 0.16712454 0
1 227489124 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.715;LDAF=0.0079;AVGPOST=0.9953;RSQ=0.7606;ERATE=0.0006;THETA=0.0009;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 227489129 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1258;AVGPOST=0.9970;RSQ=0.9900;ERATE=0.0005;THETA=0.0020;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 227489164 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.984;LDAF=0.0876;AVGPOST=0.9948;RSQ=0.9734;ERATE=0.0007;THETA=0.0005;AC=191;AN=2184 GT:DS:GL:BD 0.08745421 0
1 227489222 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.956;LDAF=0.1882;AVGPOST=0.9876;RSQ=0.9698;ERATE=0.0013;THETA=0.0008;AC=410;AN=2184 GT:DS:GL:BD 0.18772894 0
1 227489258 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.948;LDAF=0.1802;AVGPOST=0.9943;RSQ=0.9859;ERATE=0.0004;THETA=0.0003;AC=398;AN=2184 GT:DS:GL:BD 0.18223444 0
1 227489263 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.948;LDAF=0.1801;AVGPOST=0.9945;RSQ=0.9864;ERATE=0.0003;THETA=0.0020;AC=398;AN=2184 GT:DS:GL:BD 0.18223444 0
1 227489359 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.5878;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227489409 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.3431;AVGPOST=0.9968;RSQ=0.9940;ERATE=0.0006;THETA=0.0005;AC=752;AN=2184 GT:DS:GL:BD 0.34432235 0
1 227489478 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.817;LDAF=0.0072;AVGPOST=0.9956;RSQ=0.7854;ERATE=0.0006;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227489481 . CCTA C 96 PASS INDEL;BAVGPOST=0.999;BRSQ=0.734;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.6309;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227489545 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.770;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6642;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227489687 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.987;LDAF=0.3426;AVGPOST=0.9978;RSQ=0.9957;ERATE=0.0004;THETA=0.0002;AC=750;AN=2184 GT:DS:GL:BD 0.34340659 0
1 227489689 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.987;LDAF=0.3428;AVGPOST=0.9984;RSQ=0.9970;ERATE=0.0002;THETA=0.0003;AC=750;AN=2184 GT:DS:GL:BD 0.34340659 0
1 227489802 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.956;LDAF=0.0299;AVGPOST=0.9981;RSQ=0.9709;ERATE=0.0003;THETA=0.0005;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 227489830 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0041;AVGPOST=0.9984;RSQ=0.8403;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227489842 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227489868 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0117;AVGPOST=0.9989;RSQ=0.9651;ERATE=0.0002;THETA=0.0012;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227489881 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9167;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227489904 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9713;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227490090 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.894;LDAF=0.0057;AVGPOST=0.9991;RSQ=0.9367;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227490097 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9870;ERATE=0.0002;THETA=0.0011;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227490104 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5270;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227490148 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0036;AVGPOST=0.9997;RSQ=0.9697;ERATE=0.0002;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227490188 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3434;AVGPOST=0.9984;RSQ=0.9967;ERATE=0.0005;THETA=0.0004;AC=750;AN=2184 GT:DS:GL:BD 0.34340659 0
1 227490205 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6942;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227490218 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.867;LDAF=0.0029;AVGPOST=0.9988;RSQ=0.8348;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227490228 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.980;LDAF=0.0759;AVGPOST=0.9981;RSQ=0.9890;ERATE=0.0003;THETA=0.0006;AC=165;AN=2184 GT:DS:GL:BD 0.07554945 0
1 227490337 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.735;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7783;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227490345 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.933;LDAF=0.0358;AVGPOST=0.9958;RSQ=0.9575;ERATE=0.0003;THETA=0.0001;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 227490374 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0361;AVGPOST=1.0000;RSQ=0.9994;ERATE=0.0002;THETA=0.0003;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 227490385 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0002;AVGPOST=0.9995;RSQ=0.1496;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 227490430 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6814;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227490484 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0027;AVGPOST=0.9968;RSQ=0.6098;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227490563 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.762;LDAF=0.0035;AVGPOST=0.9976;RSQ=0.7615;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227490573 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.833;LDAF=0.0069;AVGPOST=0.9973;RSQ=0.8379;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227490597 rs113944332 AC A 7585 PASS INDEL;BAVGPOST=0.994;BRSQ=0.972;LDAF=0.1241;AVGPOST=0.9941;RSQ=0.9800;ERATE=0.0011;THETA=0.0005;AC=269;AN=2184 GT:DS:GL:BD 0.12316850 0
1 227490611 . C CT 8618 PASS INDEL;BAVGPOST=0.995;BRSQ=0.964;LDAF=0.0671;AVGPOST=0.9984;RSQ=0.9889;ERATE=0.0004;THETA=0.0007;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 227490646 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.894;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9119;ERATE=0.0002;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227490724 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9978;RSQ=0.8613;ERATE=0.0005;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227490729 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6678;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227490828 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6564;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227490848 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7271;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227490853 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0214;AVGPOST=0.9988;RSQ=0.9732;ERATE=0.0003;THETA=0.0004;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 227490855 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7664;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227491060 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1248;AVGPOST=0.9994;RSQ=0.9977;ERATE=0.0003;THETA=0.0004;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 227491162 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9865;ERATE=0.0002;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227491265 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5817;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227491277 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0030;AVGPOST=0.9988;RSQ=0.8189;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227491283 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227491356 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227491555 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1843;AVGPOST=0.9995;RSQ=0.9986;ERATE=0.0003;THETA=0.0004;AC=402;AN=2184 GT:DS:GL:BD 0.18406594 0
1 227491647 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0863;AVGPOST=0.9990;RSQ=0.9945;ERATE=0.0003;THETA=0.0004;AC=189;AN=2184 GT:DS:GL:BD 0.08653846 0
1 227491654 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7820;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227491714 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0380;AVGPOST=0.9996;RSQ=0.9960;ERATE=0.0003;THETA=0.0003;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 227491766 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227491812 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1837;AVGPOST=0.9988;RSQ=0.9973;ERATE=0.0003;THETA=0.0003;AC=400;AN=2184 GT:DS:GL:BD 0.18315019 0
1 227491819 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5188;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227491828 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6710;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227491848 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8609;ERATE=0.0004;THETA=0.0020;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227491849 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0816;AVGPOST=0.9979;RSQ=0.9903;ERATE=0.0003;THETA=0.0005;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 227491874 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2247;AVGPOST=0.9981;RSQ=0.9951;ERATE=0.0004;THETA=0.0003;AC=489;AN=2184 GT:DS:GL:BD 0.22390109 0
1 227491890 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.779;LDAF=0.0096;AVGPOST=0.9958;RSQ=0.8230;ERATE=0.0003;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 227491906 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9490;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227491952 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4908;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227491995 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6434;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227492008 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.788;LDAF=0.0018;AVGPOST=0.9986;RSQ=0.6551;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227492101 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0059;AVGPOST=0.9983;RSQ=0.8737;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227492259 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2197;AVGPOST=0.9985;RSQ=0.9964;ERATE=0.0004;THETA=0.0002;AC=479;AN=2184 GT:DS:GL:BD 0.21932234 0
1 227492267 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8400;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227492337 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8383;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227492504 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9871;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227492510 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0046;AVGPOST=0.9990;RSQ=0.9118;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227492528 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.6187;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227492599 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2195;AVGPOST=0.9993;RSQ=0.9982;ERATE=0.0003;THETA=0.0006;AC=479;AN=2184 GT:DS:GL:BD 0.21932234 0
1 227492720 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5389;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227492821 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7494;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227492867 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0665;AVGPOST=0.9996;RSQ=0.9974;ERATE=0.0003;THETA=0.0002;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 227493046 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3441;AVGPOST=0.9982;RSQ=0.9963;ERATE=0.0007;THETA=0.0003;AC=752;AN=2184 GT:DS:GL:BD 0.34432235 0
1 227493114 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6900;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227493115 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0586;AVGPOST=0.9997;RSQ=0.9980;ERATE=0.0002;THETA=0.0003;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 227493151 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3442;AVGPOST=0.9992;RSQ=0.9982;ERATE=0.0004;THETA=0.0002;AC=752;AN=2184 GT:DS:GL:BD 0.34432235 0
1 227493378 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0365;AVGPOST=0.9991;RSQ=0.9911;ERATE=0.0003;THETA=0.0005;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 227493436 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.769;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8088;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227493450 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.940;LDAF=0.2131;AVGPOST=0.9942;RSQ=0.9873;ERATE=0.0006;THETA=0.0002;AC=465;AN=2184 GT:DS:GL:BD 0.21291208 0
1 227493553 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.771;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4586;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227493575 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0339;AVGPOST=0.9977;RSQ=0.9733;ERATE=0.0004;THETA=0.0003;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 227493599 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.719;LDAF=0.0145;AVGPOST=0.9901;RSQ=0.7443;ERATE=0.0016;THETA=0.0009;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 227493699 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1255;AVGPOST=0.9978;RSQ=0.9936;ERATE=0.0003;THETA=0.0004;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 227493780 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5490;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227493795 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9773;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227493808 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7771;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227493911 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2245;AVGPOST=0.9984;RSQ=0.9961;ERATE=0.0004;THETA=0.0005;AC=489;AN=2184 GT:DS:GL:BD 0.22390109 0
1 227493913 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0008;AVGPOST=0.9998;RSQ=0.8876;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227494011 . CAT C 2028 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0139;AVGPOST=0.9966;RSQ=0.9145;ERATE=0.0003;THETA=0.0001;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 227494029 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0865;AVGPOST=0.9995;RSQ=0.9974;ERATE=0.0003;THETA=0.0003;AC=189;AN=2184 GT:DS:GL:BD 0.08653846 0
1 227494036 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0090;AVGPOST=0.9993;RSQ=0.9704;ERATE=0.0003;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 227494054 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7452;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227494086 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9555;ERATE=0.0002;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227494208 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8303;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227494238 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5801;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227494286 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8702;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227494307 . A AC 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6907;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227494369 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0038;AVGPOST=0.9998;RSQ=0.9710;ERATE=0.0002;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227494415 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.7070;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227494436 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3446;AVGPOST=0.9987;RSQ=0.9975;ERATE=0.0004;THETA=0.0003;AC=752;AN=2184 GT:DS:GL:BD 0.34432235 0
1 227494469 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.6116;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227494487 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7361;ERATE=0.0003;THETA=0.0027;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227494525 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2256;AVGPOST=0.9985;RSQ=0.9965;ERATE=0.0004;THETA=0.0004;AC=491;AN=2184 GT:DS:GL:BD 0.22481684 0
1 227494546 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0065;AVGPOST=0.9997;RSQ=0.9802;ERATE=0.0002;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 227494618 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.930;LDAF=0.0114;AVGPOST=0.9999;RSQ=0.9946;ERATE=0.0002;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227494687 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7599;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227494762 . TAG T 3884 PASS INDEL;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0181;AVGPOST=0.9988;RSQ=0.9702;ERATE=0.0003;THETA=0.0005;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 227494786 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=0.9992;RSQ=0.9235;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227494852 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3442;AVGPOST=0.9991;RSQ=0.9981;ERATE=0.0005;THETA=0.0004;AC=752;AN=2184 GT:DS:GL:BD 0.34432235 0
1 227494976 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1832;AVGPOST=0.9993;RSQ=0.9979;ERATE=0.0003;THETA=0.0002;AC=400;AN=2184 GT:DS:GL:BD 0.18315019 0
1 227495114 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0018;AVGPOST=0.9986;RSQ=0.6678;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227495129 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0381;AVGPOST=0.9996;RSQ=0.9960;ERATE=0.0003;THETA=0.0001;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 227495155 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2194;AVGPOST=0.9990;RSQ=0.9976;ERATE=0.0004;THETA=0.0003;AC=479;AN=2184 GT:DS:GL:BD 0.21932234 0
1 227495180 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0038;AVGPOST=0.9988;RSQ=0.8665;ERATE=0.0003;THETA=0.0019;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227495221 . TTAAA T 6134 PASS INDEL;BAVGPOST=0.993;BRSQ=0.956;LDAF=0.0813;AVGPOST=0.9933;RSQ=0.9698;ERATE=0.0003;THETA=0.0003;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 227495222 rs74939125 TAAATG T 15045 PASS INDEL;BAVGPOST=0.993;BRSQ=0.956;LDAF=0.0816;AVGPOST=0.9920;RSQ=0.9617;ERATE=0.0005;THETA=0.0003;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 227495237 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3455;AVGPOST=0.9965;RSQ=0.9939;ERATE=0.0006;THETA=0.0003;AC=752;AN=2184 GT:DS:GL:BD 0.34432235 0
1 227495391 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3441;AVGPOST=0.9995;RSQ=0.9988;ERATE=0.0003;THETA=0.0003;AC=752;AN=2184 GT:DS:GL:BD 0.34432235 0
1 227495423 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1249;AVGPOST=0.9991;RSQ=0.9966;ERATE=0.0003;THETA=0.0005;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 227495583 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.775;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4381;ERATE=0.0005;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227495641 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.3440;AVGPOST=0.9989;RSQ=0.9978;ERATE=0.0004;THETA=0.0005;AC=752;AN=2184 GT:DS:GL:BD 0.34432235 0
1 227495675 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227495713 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0157;AVGPOST=0.9996;RSQ=0.9903;ERATE=0.0003;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 227495766 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0053;AVGPOST=0.9978;RSQ=0.8618;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227495799 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5303;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227495853 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2191;AVGPOST=0.9990;RSQ=0.9975;ERATE=0.0004;THETA=0.0002;AC=479;AN=2184 GT:DS:GL:BD 0.21932234 0
1 227495922 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4116;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227495928 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.971;LDAF=0.0571;AVGPOST=0.9989;RSQ=0.9923;ERATE=0.0003;THETA=0.0004;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 227495972 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.705;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4821;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227495976 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5491;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227496033 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0065;AVGPOST=0.9997;RSQ=0.9799;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 227496080 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0116;AVGPOST=0.9997;RSQ=0.9894;ERATE=0.0003;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227496112 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.2249;AVGPOST=0.9967;RSQ=0.9918;ERATE=0.0005;THETA=0.0004;AC=489;AN=2184 GT:DS:GL:BD 0.22390109 0
1 227496223 . A AAAC 5 PASS INDEL;BAVGPOST=0.997;BRSQ=0.389;LDAF=0.0041;AVGPOST=0.9959;RSQ=0.5934;ERATE=0.0006;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227496250 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.516;LDAF=0.0407;AVGPOST=0.9523;RSQ=0.5315;ERATE=0.0141;THETA=0.0011;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 227496291 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.568;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227496438 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1511;AVGPOST=0.9979;RSQ=0.9926;ERATE=0.0003;THETA=0.0005;AC=330;AN=2184 GT:DS:GL:BD 0.15109891 0
1 227496455 . ACATTT A 63 PASS INDEL;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8877;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227496564 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.3434;AVGPOST=0.9968;RSQ=0.9936;ERATE=0.0007;THETA=0.0004;AC=752;AN=2184 GT:DS:GL:BD 0.34432235 0
1 227496582 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0061;AVGPOST=0.9994;RSQ=0.9554;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227496698 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9553;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227496785 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.868;LDAF=0.0069;AVGPOST=0.9980;RSQ=0.8742;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227496794 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.659;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8707;ERATE=0.0003;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227496839 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.3443;AVGPOST=0.9993;RSQ=0.9984;ERATE=0.0003;THETA=0.0002;AC=752;AN=2184 GT:DS:GL:BD 0.34432235 0
1 227496910 . A AT 82 PASS INDEL;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227496929 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.625;LDAF=0.9613;AVGPOST=0.9709;RSQ=0.7088;ERATE=0.0033;THETA=0.0003;AC=2112;AN=2184 GT:DS:GL:BD 0.96703297 1
1 227496996 . GATT G 1360 PASS INDEL;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0119;AVGPOST=0.9990;RSQ=0.9633;ERATE=0.0003;THETA=0.0001;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227497028 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5959;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227497158 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.821;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227497283 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.6160;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227497344 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0019;AVGPOST=0.9994;RSQ=0.8542;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227497358 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.3443;AVGPOST=0.9995;RSQ=0.9988;ERATE=0.0003;THETA=0.0006;AC=752;AN=2184 GT:DS:GL:BD 0.34432235 0
1 227497415 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.832;LDAF=0.0037;AVGPOST=0.9978;RSQ=0.7898;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227497440 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6703;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227497443 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227497450 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.3455;AVGPOST=0.9973;RSQ=0.9952;ERATE=0.0005;THETA=0.0003;AC=755;AN=2184 GT:DS:GL:BD 0.34569597 0
1 227497505 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0172;AVGPOST=0.9993;RSQ=0.9830;ERATE=0.0002;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 227497530 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6798;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227497679 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.853;LDAF=0.0084;AVGPOST=0.9968;RSQ=0.8569;ERATE=0.0005;THETA=0.0008;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 227497747 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2179;AVGPOST=0.9982;RSQ=0.9955;ERATE=0.0004;THETA=0.0004;AC=474;AN=2184 GT:DS:GL:BD 0.21703297 0
1 227497799 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6200;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227497865 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8938;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227497869 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.805;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.7985;ERATE=0.0002;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227498032 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8517;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227498066 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0669;AVGPOST=0.9995;RSQ=0.9965;ERATE=0.0003;THETA=0.0004;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 227498095 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0155;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0006;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 227498217 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0085;AVGPOST=0.9994;RSQ=0.9669;ERATE=0.0002;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 227498272 . GT G 43 PASS INDEL;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7031;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227498375 rs34491074 G GT 7600 PASS INDEL;BAVGPOST=0.954;BRSQ=0.853;LDAF=0.2101;AVGPOST=0.9046;RSQ=0.7681;ERATE=0.0207;THETA=0.0004;AC=400;AN=2184 GT:DS:GL:BD 0.18315019 0
1 227498383 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.711;LDAF=0.0036;AVGPOST=0.9983;RSQ=0.7869;ERATE=0.0004;THETA=0.0025;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227498386 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.832;LDAF=0.0261;AVGPOST=0.9913;RSQ=0.8676;ERATE=0.0003;THETA=0.0031;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 227498469 rs112746919 G GCT 9891 PASS INDEL;BAVGPOST=0.989;BRSQ=0.953;LDAF=0.1253;AVGPOST=0.9958;RSQ=0.9842;ERATE=0.0007;THETA=0.0004;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 227498517 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.970;LDAF=0.1475;AVGPOST=0.9934;RSQ=0.9793;ERATE=0.0007;THETA=0.0002;AC=321;AN=2184 GT:DS:GL:BD 0.14697802 0
1 227498582 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.961;BRSQ=0.674;LDAF=0.0668;AVGPOST=0.9678;RSQ=0.8236;ERATE=0.0005;THETA=0.0005;AC=144;AN=2184 GT:DS:GL:BD 0.06593407 0
1 227498584 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.863;BRSQ=0.657;LDAF=0.2344;AVGPOST=0.8835;RSQ=0.7729;ERATE=0.0080;THETA=0.0004;AC=502;AN=2184 GT:DS:GL:BD 0.22985348 0
1 227498600 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0836;AVGPOST=0.9942;RSQ=0.9704;ERATE=0.0008;THETA=0.0003;AC=179;AN=2184 GT:DS:GL:BD 0.08195971 0
1 227498688 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4954;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227498704 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.861;LDAF=0.0064;AVGPOST=0.9982;RSQ=0.8837;ERATE=0.0004;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227498752 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0327;AVGPOST=0.9996;RSQ=0.9942;ERATE=0.0003;THETA=0.0014;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 227498809 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0016;AVGPOST=0.9975;RSQ=0.4956;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227498882 . C CA 2145 PASS INDEL;BAVGPOST=0.909;BRSQ=0.820;LDAF=0.3596;AVGPOST=0.9163;RSQ=0.8638;ERATE=0.0011;THETA=0.0003;AC=799;AN=2184 GT:DS:GL:BD 0.36584249 0
1 227498883 . C CA 2153 PASS INDEL;BAVGPOST=0.909;BRSQ=0.821;LDAF=0.3617;AVGPOST=0.9176;RSQ=0.8682;ERATE=0.0003;THETA=0.0004;AC=800;AN=2184 GT:DS:GL:BD 0.36630037 0
1 227498975 . T TCA 31540 PASS INDEL;BAVGPOST=0.980;BRSQ=0.955;LDAF=0.3376;AVGPOST=0.9800;RSQ=0.9654;ERATE=0.0031;THETA=0.0002;AC=740;AN=2184 GT:DS:GL:BD 0.33882785 0
1 227498981 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.799;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8088;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227499061 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3441;AVGPOST=0.9994;RSQ=0.9987;ERATE=0.0004;THETA=0.0003;AC=752;AN=2184 GT:DS:GL:BD 0.34432235 0
1 227499198 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1826;AVGPOST=0.9988;RSQ=0.9971;ERATE=0.0003;THETA=0.0002;AC=398;AN=2184 GT:DS:GL:BD 0.18223444 0
1 227499323 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3444;AVGPOST=0.9990;RSQ=0.9979;ERATE=0.0003;THETA=0.0002;AC=752;AN=2184 GT:DS:GL:BD 0.34432235 0
1 227499360 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3440;AVGPOST=0.9994;RSQ=0.9986;ERATE=0.0004;THETA=0.0004;AC=752;AN=2184 GT:DS:GL:BD 0.34432235 0
1 227499408 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.979;LDAF=0.2195;AVGPOST=0.9963;RSQ=0.9913;ERATE=0.0005;THETA=0.0003;AC=478;AN=2184 GT:DS:GL:BD 0.21886447 0
1 227499454 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6383;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227499486 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.787;LDAF=0.0021;AVGPOST=0.9991;RSQ=0.8187;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227499511 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.813;LDAF=0.0028;AVGPOST=0.9983;RSQ=0.7633;ERATE=0.0006;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227499568 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6434;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227499588 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1516;AVGPOST=0.9979;RSQ=0.9927;ERATE=0.0004;THETA=0.0004;AC=331;AN=2184 GT:DS:GL:BD 0.15155677 0
1 227499593 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3445;AVGPOST=0.9987;RSQ=0.9972;ERATE=0.0005;THETA=0.0004;AC=752;AN=2184 GT:DS:GL:BD 0.34432235 0
1 227499717 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.971;LDAF=0.0643;AVGPOST=0.9980;RSQ=0.9879;ERATE=0.0002;THETA=0.0003;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 227499718 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.3408;AVGPOST=0.9958;RSQ=0.9930;ERATE=0.0005;THETA=0.0006;AC=747;AN=2184 GT:DS:GL:BD 0.34203297 0
1 227499819 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0120;AVGPOST=0.9989;RSQ=0.9639;ERATE=0.0002;THETA=0.0007;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227499830 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5520;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227499842 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.631;LDAF=0.0016;AVGPOST=0.9983;RSQ=0.5951;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227499865 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0055;AVGPOST=0.9991;RSQ=0.9381;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227499881 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0863;AVGPOST=0.9976;RSQ=0.9887;ERATE=0.0005;THETA=0.0003;AC=188;AN=2184 GT:DS:GL:BD 0.08608059 0
1 227499914 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.680;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.7113;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227499939 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.989;LDAF=0.1835;AVGPOST=0.9974;RSQ=0.9940;ERATE=0.0005;THETA=0.0012;AC=400;AN=2184 GT:DS:GL:BD 0.18315019 0
1 227500043 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.928;LDAF=0.0181;AVGPOST=0.9989;RSQ=0.9776;ERATE=0.0002;THETA=0.0008;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 227500073 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3445;AVGPOST=0.9946;RSQ=0.9908;ERATE=0.0008;THETA=0.0038;AC=753;AN=2184 GT:DS:GL:BD 0.34478021 0
1 227500282 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.878;LDAF=0.0063;AVGPOST=0.9978;RSQ=0.8643;ERATE=0.0006;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227500301 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.972;LDAF=0.0289;AVGPOST=0.9955;RSQ=0.9440;ERATE=0.0003;THETA=0.0009;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 227500439 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5799;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227500475 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.976;LDAF=0.2200;AVGPOST=0.9966;RSQ=0.9927;ERATE=0.0004;THETA=0.0007;AC=481;AN=2184 GT:DS:GL:BD 0.22023809 0
1 227500476 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0019;AVGPOST=0.9994;RSQ=0.8556;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227500487 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227500496 . G GTGT 8831 PASS INDEL;BAVGPOST=0.954;BRSQ=0.906;LDAF=0.3166;AVGPOST=0.9697;RSQ=0.9492;ERATE=0.0004;THETA=0.0006;AC=702;AN=2184 GT:DS:GL:BD 0.32142857 0
1 227500498 rs112062974 G GTTC 32900 PASS INDEL;BAVGPOST=0.954;BRSQ=0.906;LDAF=0.3168;AVGPOST=0.9715;RSQ=0.9513;ERATE=0.0010;THETA=0.0004;AC=703;AN=2184 GT:DS:GL:BD 0.32188645 0
1 227500507 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6889;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227500527 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.975;LDAF=0.3416;AVGPOST=0.9814;RSQ=0.9700;ERATE=0.0043;THETA=0.0015;AC=746;AN=2184 GT:DS:GL:BD 0.34157509 0
1 227500544 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0037;AVGPOST=0.9995;RSQ=0.9391;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227500559 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1249;AVGPOST=0.9990;RSQ=0.9960;ERATE=0.0003;THETA=0.0002;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 227500594 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.8989;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227500672 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6061;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227500759 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3442;AVGPOST=0.9989;RSQ=0.9978;ERATE=0.0003;THETA=0.0006;AC=752;AN=2184 GT:DS:GL:BD 0.34432235 0
1 227500880 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.3967;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227500961 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3443;AVGPOST=0.9982;RSQ=0.9964;ERATE=0.0005;THETA=0.0002;AC=752;AN=2184 GT:DS:GL:BD 0.34432235 0
1 227501044 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1248;AVGPOST=0.9996;RSQ=0.9986;ERATE=0.0003;THETA=0.0010;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 227501160 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3440;AVGPOST=0.9990;RSQ=0.9980;ERATE=0.0003;THETA=0.0005;AC=752;AN=2184 GT:DS:GL:BD 0.34432235 0
1 227501203 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0037;AVGPOST=0.9993;RSQ=0.9126;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227501239 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8544;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227501263 . TTA T 231 PASS INDEL;BAVGPOST=0.998;BRSQ=0.742;LDAF=0.0028;AVGPOST=0.9985;RSQ=0.7870;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227501317 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0017;AVGPOST=0.9977;RSQ=0.5402;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227501336 . GATTA G 33570 PASS INDEL;BAVGPOST=0.989;BRSQ=0.992;LDAF=0.3426;AVGPOST=0.9925;RSQ=0.9860;ERATE=0.0008;THETA=0.0003;AC=751;AN=2184 GT:DS:GL:BD 0.34386447 0
1 227501342 rs56896309 TTA T 1699 PASS INDEL;BAVGPOST=0.928;BRSQ=0.841;LDAF=0.2992;AVGPOST=0.9385;RSQ=0.8860;ERATE=0.0044;THETA=0.0005;AC=674;AN=2184 GT:DS:GL:BD 0.30860806 0
1 227501403 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3442;AVGPOST=0.9978;RSQ=0.9956;ERATE=0.0006;THETA=0.0004;AC=752;AN=2184 GT:DS:GL:BD 0.34432235 0
1 227501457 rs74766397 TA T 16321 PASS INDEL;BAVGPOST=0.984;BRSQ=0.966;LDAF=0.3428;AVGPOST=0.9573;RSQ=0.9295;ERATE=0.0078;THETA=0.0006;AC=742;AN=2184 GT:DS:GL:BD 0.33974358 0
1 227501483 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.715;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7262;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227501515 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.2195;AVGPOST=0.9990;RSQ=0.9975;ERATE=0.0003;THETA=0.0005;AC=479;AN=2184 GT:DS:GL:BD 0.21932234 0
1 227501542 . A AG 4183 PASS INDEL;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0362;AVGPOST=0.9985;RSQ=0.9852;ERATE=0.0003;THETA=0.0008;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 227501550 rs61127281 AAC A 11329 PASS INDEL;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.1260;AVGPOST=0.9979;RSQ=0.9925;ERATE=0.0004;THETA=0.0004;AC=277;AN=2184 GT:DS:GL:BD 0.12683150 0
1 227501555 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.987;LDAF=0.3432;AVGPOST=0.9977;RSQ=0.9954;ERATE=0.0002;THETA=0.0002;AC=750;AN=2184 GT:DS:GL:BD 0.34340659 0
1 227501687 . TTTA T 2017 PASS INDEL;BAVGPOST=0.992;BRSQ=0.677;LDAF=0.0160;AVGPOST=0.9899;RSQ=0.7580;ERATE=0.0007;THETA=0.0011;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 227501697 . A AC 51 PASS INDEL;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0044;AVGPOST=0.9941;RSQ=0.5101;ERATE=0.0006;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227501743 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.986;LDAF=0.3449;AVGPOST=0.9963;RSQ=0.9930;ERATE=0.0008;THETA=0.0005;AC=755;AN=2184 GT:DS:GL:BD 0.34569597 0
1 227501788 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4968;ERATE=0.0002;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227501799 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.851;LDAF=0.0057;AVGPOST=0.9983;RSQ=0.8865;ERATE=0.0002;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227501815 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.746;LDAF=0.0021;AVGPOST=0.9989;RSQ=0.7810;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227501867 . T TAA 39 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0037;AVGPOST=0.9955;RSQ=0.5184;ERATE=0.0008;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227501944 rs66854285 TAAAAC T 14013 PASS INDEL;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0814;AVGPOST=0.9980;RSQ=0.9896;ERATE=0.0003;THETA=0.0006;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 227501984 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0809;AVGPOST=0.9990;RSQ=0.9942;ERATE=0.0003;THETA=0.0004;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 227502001 . AT A 22 PASS INDEL;BAVGPOST=0.999;BRSQ=0.762;LDAF=0.0030;AVGPOST=0.9968;RSQ=0.5972;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227502073 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7045;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227502076 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3435;AVGPOST=0.9977;RSQ=0.9954;ERATE=0.0005;THETA=0.0005;AC=752;AN=2184 GT:DS:GL:BD 0.34432235 0
1 227502268 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5134;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227502279 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0043;AVGPOST=0.9991;RSQ=0.9048;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227502300 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6426;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227502320 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.976;LDAF=0.3414;AVGPOST=0.9956;RSQ=0.9920;ERATE=0.0003;THETA=0.0003;AC=749;AN=2184 GT:DS:GL:BD 0.34294870 0
1 227502331 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.981;LDAF=0.3423;AVGPOST=0.9957;RSQ=0.9923;ERATE=0.0004;THETA=0.0003;AC=751;AN=2184 GT:DS:GL:BD 0.34386447 0
1 227502368 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.946;LDAF=0.0197;AVGPOST=0.9983;RSQ=0.9699;ERATE=0.0003;THETA=0.0004;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 227502418 . G GT 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6295;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227502429 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5687;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227502523 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0042;AVGPOST=0.9990;RSQ=0.9064;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227502561 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0116;AVGPOST=0.9997;RSQ=0.9878;ERATE=0.0003;THETA=0.0009;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227502659 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0361;AVGPOST=0.9992;RSQ=0.9905;ERATE=0.0002;THETA=0.0023;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 227502766 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3442;AVGPOST=0.9969;RSQ=0.9942;ERATE=0.0005;THETA=0.0008;AC=752;AN=2184 GT:DS:GL:BD 0.34432235 0
1 227502861 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5869;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227502894 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.670;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5437;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227502943 rs72213666 AAATG A 35234 PASS INDEL;BAVGPOST=0.993;BRSQ=0.987;LDAF=0.3424;AVGPOST=0.9943;RSQ=0.9896;ERATE=0.0012;THETA=0.0003;AC=748;AN=2184 GT:DS:GL:BD 0.34249085 0
1 227503092 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0028;AVGPOST=0.9988;RSQ=0.8112;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227503143 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0156;AVGPOST=0.9998;RSQ=0.9940;ERATE=0.0002;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 227503331 . T TA 5 PASS INDEL;BAVGPOST=0.999;BRSQ=0.744;LDAF=0.0038;AVGPOST=0.9944;RSQ=0.4609;ERATE=0.0013;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227503357 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.980;LDAF=0.3422;AVGPOST=0.9967;RSQ=0.9934;ERATE=0.0005;THETA=0.0003;AC=750;AN=2184 GT:DS:GL:BD 0.34340659 0
1 227503381 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3443;AVGPOST=0.9993;RSQ=0.9985;ERATE=0.0004;THETA=0.0004;AC=752;AN=2184 GT:DS:GL:BD 0.34432235 0
1 227503469 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.986;LDAF=0.3574;AVGPOST=0.9959;RSQ=0.9923;ERATE=0.0006;THETA=0.0004;AC=778;AN=2184 GT:DS:GL:BD 0.35622710 0
1 227503518 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0103;AVGPOST=0.9966;RSQ=0.8623;ERATE=0.0003;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 227503545 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3443;AVGPOST=0.9988;RSQ=0.9975;ERATE=0.0004;THETA=0.0002;AC=752;AN=2184 GT:DS:GL:BD 0.34432235 0
1 227503564 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1253;AVGPOST=0.9963;RSQ=0.9882;ERATE=0.0005;THETA=0.0002;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 227503567 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1836;AVGPOST=0.9979;RSQ=0.9949;ERATE=0.0004;THETA=0.0004;AC=400;AN=2184 GT:DS:GL:BD 0.18315019 0
1 227503594 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0032;AVGPOST=0.9998;RSQ=0.9668;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227503595 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5382;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227503686 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3443;AVGPOST=0.9985;RSQ=0.9969;ERATE=0.0006;THETA=0.0002;AC=752;AN=2184 GT:DS:GL:BD 0.34432235 0
1 227503689 rs71180729 C CTTGACTTTTA 47685 PASS INDEL;BAVGPOST=0.989;BRSQ=0.974;LDAF=0.2231;AVGPOST=0.9915;RSQ=0.9803;ERATE=0.0012;THETA=0.0005;AC=488;AN=2184 GT:DS:GL:BD 0.22344323 0
1 227503727 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7687;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227503729 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227503741 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0037;AVGPOST=0.9996;RSQ=0.9546;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227503785 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0018;AVGPOST=0.9997;RSQ=0.9172;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227503799 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1573;AVGPOST=0.9993;RSQ=0.9976;ERATE=0.0003;THETA=0.0003;AC=344;AN=2184 GT:DS:GL:BD 0.15750916 0
1 227503878 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4641;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227503880 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227503912 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3443;AVGPOST=0.9995;RSQ=0.9991;ERATE=0.0002;THETA=0.0002;AC=752;AN=2184 GT:DS:GL:BD 0.34432235 0
1 227504021 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9267;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227504075 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7163;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227504078 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2236;AVGPOST=0.9982;RSQ=0.9953;ERATE=0.0004;THETA=0.0002;AC=488;AN=2184 GT:DS:GL:BD 0.22344323 0
1 227504093 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7597;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227504098 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5797;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227504138 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3445;AVGPOST=0.9973;RSQ=0.9948;ERATE=0.0010;THETA=0.0005;AC=752;AN=2184 GT:DS:GL:BD 0.34432235 0
1 227504168 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0032;AVGPOST=0.9995;RSQ=0.9268;ERATE=0.0002;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227504174 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.825;LDAF=0.0020;AVGPOST=0.9990;RSQ=0.8106;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227504281 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9687;ERATE=0.0002;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227504287 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0022;AVGPOST=0.9990;RSQ=0.8060;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227504303 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.3443;AVGPOST=0.9986;RSQ=0.9971;ERATE=0.0005;THETA=0.0006;AC=752;AN=2184 GT:DS:GL:BD 0.34432235 0
1 227504323 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5766;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227504334 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1245;AVGPOST=0.9991;RSQ=0.9971;ERATE=0.0003;THETA=0.0008;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 227504459 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9181;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227504531 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3442;AVGPOST=0.9992;RSQ=0.9985;ERATE=0.0002;THETA=0.0004;AC=752;AN=2184 GT:DS:GL:BD 0.34432235 0
1 227504585 . GTC G 36 PASS INDEL;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6206;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227504613 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8364;AVGPOST=0.9992;RSQ=0.9979;ERATE=0.0003;THETA=0.0006;AC=1826;AN=2184 GT:DS:GL:BD 0.83608061 1
1 227504745 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227504756 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7653;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227504794 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2779;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=607;AN=2184 GT:DS:GL:BD 0.27793041 0
1 227504830 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0002;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 227504839 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227504924 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9863;ERATE=0.0006;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227505084 . ACATAT A 1233 PASS INDEL;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0051;AVGPOST=0.9984;RSQ=0.8733;ERATE=0.0007;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227505088 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.0941;AVGPOST=0.9963;RSQ=0.9833;ERATE=0.0007;THETA=0.0004;AC=204;AN=2184 GT:DS:GL:BD 0.09340660 0
1 227505157 . T TA 149 PASS INDEL;BAVGPOST=0.999;BRSQ=0.683;LDAF=0.0039;AVGPOST=0.9955;RSQ=0.5546;ERATE=0.0005;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227505167 . AAAT A 1018 PASS INDEL;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0120;AVGPOST=0.9985;RSQ=0.9442;ERATE=0.0004;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227505285 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6494;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227505475 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.697;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.5069;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227505509 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.8622;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227505643 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2224;AVGPOST=0.9955;RSQ=0.9894;ERATE=0.0008;THETA=0.0004;AC=487;AN=2184 GT:DS:GL:BD 0.22298534 0
1 227505713 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.893;LDAF=0.1046;AVGPOST=0.9740;RSQ=0.8880;ERATE=0.0010;THETA=0.0009;AC=224;AN=2184 GT:DS:GL:BD 0.10256410 0
1 227505819 . C CG 7703 PASS INDEL;BAVGPOST=0.983;BRSQ=0.042;LDAF=0.9739;AVGPOST=0.9599;RSQ=0.3745;ERATE=0.0022;THETA=0.0003;AC=2155;AN=2184 GT:DS:GL:BD 0.98672163 1
1 227505820 rs71180731 G GC 17520 PASS INDEL;BAVGPOST=0.992;BRSQ=0.031;LDAF=0.9390;AVGPOST=0.9070;RSQ=0.3571;ERATE=0.0045;THETA=0.0004;AC=2116;AN=2184 GT:DS:GL:BD 0.96886444 1
1 227505871 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0055;AVGPOST=0.9970;RSQ=0.7797;ERATE=0.0004;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227505957 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.986;LDAF=0.0598;AVGPOST=0.9960;RSQ=0.9727;ERATE=0.0009;THETA=0.0004;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 227505958 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.635;LDAF=0.0015;AVGPOST=0.9978;RSQ=0.3587;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227505974 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.971;LDAF=0.2815;AVGPOST=0.9838;RSQ=0.9697;ERATE=0.0015;THETA=0.0004;AC=611;AN=2184 GT:DS:GL:BD 0.27976191 0
1 227505994 rs71180732 C CG 30694 PASS INDEL;BAVGPOST=0.996;BRSQ=0.150;LDAF=0.9827;AVGPOST=0.9770;RSQ=0.4441;ERATE=0.0019;THETA=0.0002;AC=2164;AN=2184 GT:DS:GL:BD 0.99084246 1
1 227506034 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.968;LDAF=0.2809;AVGPOST=0.9932;RSQ=0.9864;ERATE=0.0010;THETA=0.0004;AC=609;AN=2184 GT:DS:GL:BD 0.27884614 0
1 227506106 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.874;LDAF=0.0134;AVGPOST=0.9966;RSQ=0.8921;ERATE=0.0006;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 227506496 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.313;LDAF=0.0266;AVGPOST=0.9702;RSQ=0.5343;ERATE=0.0023;THETA=0.0004;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 227506517 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.934;LDAF=0.2657;AVGPOST=0.9870;RSQ=0.9752;ERATE=0.0010;THETA=0.0005;AC=583;AN=2184 GT:DS:GL:BD 0.26694140 0
1 227506682 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0032;AVGPOST=0.9975;RSQ=0.7278;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227506683 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.965;LDAF=0.0241;AVGPOST=0.9965;RSQ=0.9448;ERATE=0.0003;THETA=0.0002;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 227506761 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4234;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227506795 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2194;AVGPOST=0.9996;RSQ=0.9989;ERATE=0.0003;THETA=0.0004;AC=479;AN=2184 GT:DS:GL:BD 0.21932234 0
1 227506852 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8205;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227506911 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.909;LDAF=0.0084;AVGPOST=0.9986;RSQ=0.9292;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227506948 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.980;LDAF=0.2178;AVGPOST=0.9971;RSQ=0.9934;ERATE=0.0003;THETA=0.0002;AC=477;AN=2184 GT:DS:GL:BD 0.21840659 0
1 227507046 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0906;AVGPOST=0.9986;RSQ=0.9927;ERATE=0.0003;THETA=0.0003;AC=198;AN=2184 GT:DS:GL:BD 0.09065934 0
1 227507057 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2779;AVGPOST=0.9963;RSQ=0.9926;ERATE=0.0008;THETA=0.0006;AC=607;AN=2184 GT:DS:GL:BD 0.27793041 0
1 227507103 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2194;AVGPOST=0.9996;RSQ=0.9991;ERATE=0.0002;THETA=0.0004;AC=479;AN=2184 GT:DS:GL:BD 0.21932234 0
1 227507267 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227507505 . A ACATTTG 52878 PASS INDEL;BAVGPOST=0.980;BRSQ=0.948;LDAF=0.2186;AVGPOST=0.9773;RSQ=0.9540;ERATE=0.0037;THETA=0.0004;AC=475;AN=2184 GT:DS:GL:BD 0.21749084 0
1 227507509 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0872;AVGPOST=0.9980;RSQ=0.9908;ERATE=0.0003;THETA=0.0004;AC=191;AN=2184 GT:DS:GL:BD 0.08745421 0
1 227507552 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0032;AVGPOST=0.9998;RSQ=0.9668;ERATE=0.0002;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227507558 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0073;AVGPOST=0.9989;RSQ=0.9540;ERATE=0.0002;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 227507571 . CT C 9 PASS INDEL;BAVGPOST=0.999;BRSQ=0.564;LDAF=0.0033;AVGPOST=0.9982;RSQ=0.7716;ERATE=0.0005;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227507619 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0036;AVGPOST=0.9993;RSQ=0.9182;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227507663 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0590;AVGPOST=0.9995;RSQ=0.9967;ERATE=0.0003;THETA=0.0005;AC=129;AN=2184 GT:DS:GL:BD 0.05906593 0
1 227507726 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0180;AVGPOST=0.9995;RSQ=0.9859;ERATE=0.0003;THETA=0.0002;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 227507862 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5589;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227507921 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0054;AVGPOST=0.9993;RSQ=0.9495;ERATE=0.0002;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227507936 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2194;AVGPOST=0.9994;RSQ=0.9985;ERATE=0.0003;THETA=0.0003;AC=479;AN=2184 GT:DS:GL:BD 0.21932234 0
1 227508073 . AAC A 5955 PASS INDEL;BAVGPOST=0.976;BRSQ=0.933;LDAF=0.2069;AVGPOST=0.9765;RSQ=0.9486;ERATE=0.0020;THETA=0.0004;AC=459;AN=2184 GT:DS:GL:BD 0.21016483 0
1 227508108 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5536;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227508118 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2193;AVGPOST=0.9990;RSQ=0.9975;ERATE=0.0003;THETA=0.0004;AC=479;AN=2184 GT:DS:GL:BD 0.21932234 0
1 227508273 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.643;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.5954;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227508339 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0074;AVGPOST=0.9972;RSQ=0.8611;ERATE=0.0003;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 227508473 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7393;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227508488 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5431;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227508494 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227508515 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227508521 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227508540 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0047;AVGPOST=0.9996;RSQ=0.9592;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227508547 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9562;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227508626 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9444;ERATE=0.0004;THETA=0.0016;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227508786 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7306;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227508884 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8388;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227508929 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0361;AVGPOST=1.0000;RSQ=0.9994;ERATE=0.0002;THETA=0.0007;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 227508935 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0361;AVGPOST=0.9997;RSQ=0.9963;ERATE=0.0002;THETA=0.0004;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 227508949 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227509018 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0364;AVGPOST=0.9994;RSQ=0.9917;ERATE=0.0003;THETA=0.0004;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 227509040 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8366;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227509081 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0362;AVGPOST=0.9999;RSQ=0.9988;ERATE=0.0002;THETA=0.0005;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 227509115 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0362;AVGPOST=0.9999;RSQ=0.9988;ERATE=0.0002;THETA=0.0003;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 227509201 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0366;AVGPOST=0.9995;RSQ=0.9937;ERATE=0.0003;THETA=0.0003;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 227509265 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0361;AVGPOST=1.0000;RSQ=0.9994;ERATE=0.0002;THETA=0.0004;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 227509272 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0043;AVGPOST=0.9979;RSQ=0.8319;ERATE=0.0002;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227509376 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227509704 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.828;LDAF=0.0066;AVGPOST=0.9930;RSQ=0.6120;ERATE=0.0008;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227509751 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0364;AVGPOST=0.9994;RSQ=0.9916;ERATE=0.0003;THETA=0.0004;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 227509822 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0623;AVGPOST=0.9952;RSQ=0.9680;ERATE=0.0006;THETA=0.0003;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 227509877 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.643;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227509884 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0375;AVGPOST=0.9962;RSQ=0.9654;ERATE=0.0003;THETA=0.0006;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 227509887 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.856;LDAF=0.0103;AVGPOST=0.9972;RSQ=0.8982;ERATE=0.0004;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 227509918 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.652;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6474;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227510014 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0330;AVGPOST=0.9986;RSQ=0.9821;ERATE=0.0003;THETA=0.0004;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 227510034 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0048;AVGPOST=0.9993;RSQ=0.9394;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227510089 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0005;AVGPOST=0.9994;RSQ=0.5060;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227510090 . T TCAGCCTCC 3712 PASS INDEL;BAVGPOST=0.988;BRSQ=0.737;LDAF=0.0316;AVGPOST=0.9929;RSQ=0.9086;ERATE=0.0005;THETA=0.0003;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 227510127 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.764;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227510167 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0361;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 227510285 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0366;AVGPOST=0.9989;RSQ=0.9872;ERATE=0.0003;THETA=0.0002;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 227510306 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0365;AVGPOST=0.9991;RSQ=0.9892;ERATE=0.0003;THETA=0.0001;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 227510379 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0361;AVGPOST=0.9999;RSQ=0.9982;ERATE=0.0003;THETA=0.0008;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 227510401 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7304;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227510440 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9642;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227510459 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0362;AVGPOST=0.9998;RSQ=0.9975;ERATE=0.0002;THETA=0.0003;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 227510465 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9700;ERATE=0.0002;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227510495 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227510519 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6907;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227510638 rs60688366 TTTTTG T 21769 PASS INDEL;BAVGPOST=0.976;BRSQ=0.945;LDAF=0.2395;AVGPOST=0.9958;RSQ=0.9912;ERATE=0.0006;THETA=0.0004;AC=524;AN=2184 GT:DS:GL:BD 0.23992674 0
1 227510751 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0362;AVGPOST=0.9998;RSQ=0.9970;ERATE=0.0003;THETA=0.0004;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 227510766 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0043;AVGPOST=0.9979;RSQ=0.8023;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227510819 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0039;AVGPOST=0.9985;RSQ=0.8840;ERATE=0.0002;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227510846 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.2407;AVGPOST=0.9985;RSQ=0.9969;ERATE=0.0003;THETA=0.0008;AC=526;AN=2184 GT:DS:GL:BD 0.24084249 0
1 227510995 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0361;AVGPOST=0.9999;RSQ=0.9982;ERATE=0.0002;THETA=0.0006;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 227511041 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.855;LDAF=0.0074;AVGPOST=0.9961;RSQ=0.8300;ERATE=0.0002;THETA=0.0012;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 227511074 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0362;AVGPOST=0.9998;RSQ=0.9975;ERATE=0.0003;THETA=0.0006;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 227511208 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6470;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227511238 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9882;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227511243 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0343;AVGPOST=0.9993;RSQ=0.9902;ERATE=0.0002;THETA=0.0003;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 227511309 . ACT A 87 PASS INDEL;BAVGPOST=0.993;BRSQ=0.890;LDAF=0.0344;AVGPOST=0.9973;RSQ=0.9679;ERATE=0.0004;THETA=0.0003;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 227511310 rs71985918 CTCTT C 5846 PASS INDEL;BAVGPOST=0.997;BRSQ=0.963;LDAF=0.0360;AVGPOST=0.9997;RSQ=0.9964;ERATE=0.0003;THETA=0.0002;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 227511329 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.987;LDAF=0.0857;AVGPOST=0.9992;RSQ=0.9956;ERATE=0.0002;THETA=0.0003;AC=188;AN=2184 GT:DS:GL:BD 0.08608059 0
1 227511334 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9670;ERATE=0.0002;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227511411 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0361;AVGPOST=0.9999;RSQ=0.9982;ERATE=0.0003;THETA=0.0002;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 227511478 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0047;AVGPOST=0.9988;RSQ=0.8978;ERATE=0.0002;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227511484 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0025;AVGPOST=0.9993;RSQ=0.8798;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227511486 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6765;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227511557 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7880;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227511581 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0003;AVGPOST=0.9994;RSQ=0.3338;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 227511585 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2417;AVGPOST=0.9997;RSQ=0.9994;ERATE=0.0002;THETA=0.0004;AC=528;AN=2184 GT:DS:GL:BD 0.24175824 0
1 227511630 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0032;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227511682 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7209;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227511685 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7144;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227511711 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.891;LDAF=0.0116;AVGPOST=0.9976;RSQ=0.9119;ERATE=0.0004;THETA=0.0001;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227511793 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0361;AVGPOST=0.9999;RSQ=0.9988;ERATE=0.0002;THETA=0.0002;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 227511869 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227511926 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0364;AVGPOST=0.9995;RSQ=0.9932;ERATE=0.0003;THETA=0.0004;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 227512003 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2769;AVGPOST=0.9998;RSQ=0.9995;ERATE=0.0002;THETA=0.0004;AC=605;AN=2184 GT:DS:GL:BD 0.27701464 0
1 227512021 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.2387;AVGPOST=0.9963;RSQ=0.9928;ERATE=0.0006;THETA=0.0004;AC=523;AN=2184 GT:DS:GL:BD 0.23946886 0
1 227512024 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6657;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227512080 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0362;AVGPOST=0.9998;RSQ=0.9975;ERATE=0.0003;THETA=0.0004;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 227512164 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.785;LDAF=0.0106;AVGPOST=0.9941;RSQ=0.7873;ERATE=0.0006;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 227512190 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2741;AVGPOST=0.9943;RSQ=0.9893;ERATE=0.0005;THETA=0.0006;AC=600;AN=2184 GT:DS:GL:BD 0.27472529 0
1 227512199 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0039;AVGPOST=0.9992;RSQ=0.9079;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227512300 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5081;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227512342 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0361;AVGPOST=1.0000;RSQ=0.9994;ERATE=0.0002;THETA=0.0006;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 227512393 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7640;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227512419 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9424;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227512424 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0363;AVGPOST=0.9997;RSQ=0.9957;ERATE=0.0003;THETA=0.0002;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 227512602 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0014;AVGPOST=0.9979;RSQ=0.5789;ERATE=0.0003;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227512618 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7142;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227512622 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.5198;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227512635 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0034;AVGPOST=0.9997;RSQ=0.9545;ERATE=0.0002;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227512651 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7056;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227512665 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227512692 . CAA C 118 PASS INDEL;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227512751 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0128;AVGPOST=0.9995;RSQ=0.9814;ERATE=0.0003;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 227512973 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0324;AVGPOST=0.9987;RSQ=0.9859;ERATE=0.0003;THETA=0.0006;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 227513033 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2605;AVGPOST=0.9988;RSQ=0.9974;ERATE=0.0003;THETA=0.0030;AC=568;AN=2184 GT:DS:GL:BD 0.26007327 0
1 227513208 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7163;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227513311 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.987;LDAF=0.4987;AVGPOST=0.9928;RSQ=0.9887;ERATE=0.0005;THETA=0.0003;AC=1091;AN=2184 GT:DS:GL:BD 0.49954212 0
1 227513325 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.983;LDAF=0.2602;AVGPOST=0.9961;RSQ=0.9913;ERATE=0.0007;THETA=0.0008;AC=567;AN=2184 GT:DS:GL:BD 0.25961539 0
1 227513405 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.986;LDAF=0.2591;AVGPOST=0.9939;RSQ=0.9877;ERATE=0.0008;THETA=0.0003;AC=565;AN=2184 GT:DS:GL:BD 0.25869963 0
1 227513472 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.718;LDAF=0.0008;AVGPOST=0.9989;RSQ=0.4274;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227513482 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.985;LDAF=0.2604;AVGPOST=0.9948;RSQ=0.9893;ERATE=0.0005;THETA=0.0004;AC=567;AN=2184 GT:DS:GL:BD 0.25961539 0
1 227513488 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.775;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.8248;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227513596 . GC G 23 PASS INDEL;BAVGPOST=0.999;BRSQ=0.739;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5069;ERATE=0.0003;THETA=0.0058;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227513630 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0329;AVGPOST=0.9991;RSQ=0.9895;ERATE=0.0002;THETA=0.0007;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 227513677 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0813;AVGPOST=0.9984;RSQ=0.9915;ERATE=0.0004;THETA=0.0011;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 227513724 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2606;AVGPOST=0.9980;RSQ=0.9960;ERATE=0.0003;THETA=0.0051;AC=569;AN=2184 GT:DS:GL:BD 0.26053113 0
1 227513825 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.799;LDAF=0.0033;AVGPOST=0.9982;RSQ=0.7609;ERATE=0.0005;THETA=0.0031;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227513845 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.844;LDAF=0.0093;AVGPOST=0.9965;RSQ=0.8726;ERATE=0.0005;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 227513868 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.782;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5595;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227514024 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2747;AVGPOST=0.9989;RSQ=0.9976;ERATE=0.0004;THETA=0.0003;AC=598;AN=2184 GT:DS:GL:BD 0.27380952 0
1 227514029 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8313;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227514067 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.7842;AVGPOST=0.9955;RSQ=0.9905;ERATE=0.0004;THETA=0.0003;AC=1710;AN=2184 GT:DS:GL:BD 0.78296703 1
1 227514080 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.2748;AVGPOST=0.9979;RSQ=0.9957;ERATE=0.0005;THETA=0.0003;AC=599;AN=2184 GT:DS:GL:BD 0.27426741 0
1 227514112 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9799;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227514113 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6029;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227514161 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.980;LDAF=0.2902;AVGPOST=0.9881;RSQ=0.9779;ERATE=0.0031;THETA=0.0050;AC=628;AN=2184 GT:DS:GL:BD 0.28754580 0
1 227514266 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227514323 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.848;LDAF=0.0053;AVGPOST=0.9984;RSQ=0.8790;ERATE=0.0003;THETA=0.0041;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227514337 rs61602060 GTTCA G 36140 PASS INDEL;BAVGPOST=0.986;BRSQ=0.974;LDAF=0.3522;AVGPOST=0.9707;RSQ=0.9525;ERATE=0.0061;THETA=0.0050;AC=773;AN=2184 GT:DS:GL:BD 0.35393772 0
1 227514346 . TTCAG T 35650 PASS INDEL;BAVGPOST=0.997;BRSQ=0.577;LDAF=0.9910;AVGPOST=0.9879;RSQ=0.4865;ERATE=0.0026;THETA=0.0004;AC=2173;AN=2184 GT:DS:GL:BD 0.99496335 1
1 227514359 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9997;RSQ=0.9763;ERATE=0.0002;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227514401 . C CAGAT 5919 PASS INDEL;BAVGPOST=0.995;BRSQ=0.943;LDAF=0.0412;AVGPOST=0.9985;RSQ=0.9832;ERATE=0.0003;THETA=0.0066;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 227514482 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9787;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227514533 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.883;LDAF=0.0110;AVGPOST=0.9991;RSQ=0.9638;ERATE=0.0002;THETA=0.0008;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 227514576 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0412;AVGPOST=0.9994;RSQ=0.9925;ERATE=0.0003;THETA=0.0005;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 227514656 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0408;AVGPOST=0.9995;RSQ=0.9954;ERATE=0.0002;THETA=0.0088;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 227514675 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0410;AVGPOST=0.9993;RSQ=0.9934;ERATE=0.0003;THETA=0.0010;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 227514908 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0408;AVGPOST=0.9998;RSQ=0.9978;ERATE=0.0002;THETA=0.0015;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 227514943 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0230;AVGPOST=0.9997;RSQ=0.9945;ERATE=0.0002;THETA=0.0002;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 227514946 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0020;AVGPOST=0.9994;RSQ=0.8587;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227514987 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.976;LDAF=0.0407;AVGPOST=0.9997;RSQ=0.9963;ERATE=0.0003;THETA=0.0005;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 227515027 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6347;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227515049 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0410;AVGPOST=0.9993;RSQ=0.9914;ERATE=0.0003;THETA=0.0002;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 227515177 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4932;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227515263 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0425;AVGPOST=0.9960;RSQ=0.9646;ERATE=0.0005;THETA=0.0003;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 227515338 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.590;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.7810;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227515411 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.721;LDAF=0.0042;AVGPOST=0.9987;RSQ=0.8753;ERATE=0.0003;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227515424 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7331;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227515490 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0124;AVGPOST=0.9991;RSQ=0.9694;ERATE=0.0003;THETA=0.0022;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 227515560 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.745;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7520;ERATE=0.0003;THETA=0.0027;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227515679 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0407;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 227515724 . AC A 495 PASS INDEL;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0036;AVGPOST=0.9987;RSQ=0.8381;ERATE=0.0003;THETA=0.0030;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227515766 . A AG 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4411;ERATE=0.0007;THETA=0.0044;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227515791 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4151;AVGPOST=0.9984;RSQ=0.9971;ERATE=0.0005;THETA=0.0001;AC=907;AN=2184 GT:DS:GL:BD 0.41529304 0
1 227515874 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9244;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227515878 . C CAG 375 PASS INDEL;BAVGPOST=0.999;BRSQ=0.844;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9532;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227515929 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7568;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227516000 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1340;AVGPOST=0.9968;RSQ=0.9896;ERATE=0.0003;THETA=0.0002;AC=293;AN=2184 GT:DS:GL:BD 0.13415751 0
1 227516011 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0408;AVGPOST=0.9997;RSQ=0.9962;ERATE=0.0002;THETA=0.0002;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 227516039 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8015;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227516075 . AG A 30 PASS INDEL;BAVGPOST=0.993;BRSQ=0.121;LDAF=0.0633;AVGPOST=0.9340;RSQ=0.5739;ERATE=0.0032;THETA=0.0007;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 227516077 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0411;AVGPOST=0.9992;RSQ=0.9924;ERATE=0.0002;THETA=0.0022;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 227516086 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227516102 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0357;AVGPOST=0.9995;RSQ=0.9948;ERATE=0.0002;THETA=0.0003;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 227516259 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5229;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227516288 . C CT 5738 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0410;AVGPOST=0.9993;RSQ=0.9913;ERATE=0.0004;THETA=0.0008;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 227516320 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0408;AVGPOST=0.9992;RSQ=0.9917;ERATE=0.0002;THETA=0.0006;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 227516378 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0003;AVGPOST=0.9993;RSQ=0.3496;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 227516613 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227516689 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8815;ERATE=0.0002;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227516695 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 227516725 . AT A 272 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0036;AVGPOST=1.0000;RSQ=0.9940;ERATE=0.0002;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227516908 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0065;AVGPOST=0.9996;RSQ=0.9731;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 227516978 rs61542265 T TTC 4633 PASS INDEL;BAVGPOST=0.998;BRSQ=0.972;LDAF=0.0247;AVGPOST=0.9971;RSQ=0.9611;ERATE=0.0004;THETA=0.0003;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 227517069 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6412;ERATE=0.0004;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227517330 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.975;LDAF=0.0230;AVGPOST=0.9966;RSQ=0.9495;ERATE=0.0005;THETA=0.0002;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 227517355 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3310;AVGPOST=0.9985;RSQ=0.9970;ERATE=0.0004;THETA=0.0004;AC=722;AN=2184 GT:DS:GL:BD 0.33058608 0
1 227517428 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.929;LDAF=0.0131;AVGPOST=0.9984;RSQ=0.9490;ERATE=0.0006;THETA=0.0002;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 227517487 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3311;AVGPOST=0.9959;RSQ=0.9928;ERATE=0.0008;THETA=0.0005;AC=722;AN=2184 GT:DS:GL:BD 0.33058608 0
1 227517515 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9989;RSQ=0.9396;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 227517531 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4546;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227517546 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3307;AVGPOST=0.9976;RSQ=0.9954;ERATE=0.0005;THETA=0.0002;AC=720;AN=2184 GT:DS:GL:BD 0.32967034 0
1 227517547 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0230;AVGPOST=0.9995;RSQ=0.9904;ERATE=0.0003;THETA=0.0006;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 227517715 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.822;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.6522;ERATE=0.0003;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227517737 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.8234;AVGPOST=0.9968;RSQ=0.9910;ERATE=0.0003;THETA=0.0003;AC=1798;AN=2184 GT:DS:GL:BD 0.82326007 1
1 227517824 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0085;AVGPOST=0.9990;RSQ=0.9505;ERATE=0.0003;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 227517898 . A AAT 157 PASS INDEL;BAVGPOST=0.995;BRSQ=0.491;LDAF=0.0149;AVGPOST=0.9852;RSQ=0.5917;ERATE=0.0008;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 227517918 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.976;LDAF=0.0926;AVGPOST=0.9790;RSQ=0.9090;ERATE=0.0005;THETA=0.0005;AC=198;AN=2184 GT:DS:GL:BD 0.09065934 0
1 227518006 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0041;AVGPOST=0.9981;RSQ=0.8131;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227518041 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4160;AVGPOST=0.9989;RSQ=0.9980;ERATE=0.0005;THETA=0.0006;AC=908;AN=2184 GT:DS:GL:BD 0.41575092 0
1 227518051 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5170;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227518090 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8284;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227518102 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0039;AVGPOST=0.9996;RSQ=0.9496;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227518266 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227518267 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3313;AVGPOST=0.9990;RSQ=0.9979;ERATE=0.0003;THETA=0.0004;AC=722;AN=2184 GT:DS:GL:BD 0.33058608 0
1 227518392 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.771;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6765;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227518414 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5492;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227518456 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.8957;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227518484 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227518490 . ACG A 22 PASS INDEL;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0015;AVGPOST=0.9983;RSQ=0.5307;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227518574 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9829;ERATE=0.0002;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227518595 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.907;LDAF=0.0148;AVGPOST=0.9963;RSQ=0.9028;ERATE=0.0003;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 227518604 . AT A 1797 PASS INDEL;BAVGPOST=0.998;BRSQ=0.961;LDAF=0.0124;AVGPOST=0.9974;RSQ=0.9184;ERATE=0.0003;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227518631 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7029;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227518677 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0028;AVGPOST=0.9988;RSQ=0.8550;ERATE=0.0002;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227518687 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0150;AVGPOST=0.9991;RSQ=0.9753;ERATE=0.0004;THETA=0.0002;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 227518713 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.951;LDAF=0.0169;AVGPOST=0.9980;RSQ=0.9544;ERATE=0.0002;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 227518803 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8456;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227518921 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0043;AVGPOST=0.9993;RSQ=0.9293;ERATE=0.0002;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227518980 . T TC 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.746;LDAF=0.0025;AVGPOST=0.9958;RSQ=0.2797;ERATE=0.0012;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227519026 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9073;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227519038 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.722;LDAF=0.0045;AVGPOST=0.9979;RSQ=0.8329;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227519141 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.910;LDAF=0.0151;AVGPOST=0.9983;RSQ=0.9631;ERATE=0.0003;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 227519147 . GA G 461 PASS INDEL;BAVGPOST=0.993;BRSQ=0.702;LDAF=0.0252;AVGPOST=0.9734;RSQ=0.5761;ERATE=0.0049;THETA=0.0006;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 227519310 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.772;LDAF=0.0110;AVGPOST=0.9919;RSQ=0.7054;ERATE=0.0008;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 227519364 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.986;LDAF=0.3247;AVGPOST=0.9893;RSQ=0.9828;ERATE=0.0008;THETA=0.0002;AC=705;AN=2184 GT:DS:GL:BD 0.32280219 0
1 227519369 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.555;LDAF=0.0051;AVGPOST=0.9927;RSQ=0.3809;ERATE=0.0008;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227519417 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.757;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9082;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227519423 . T TA 76 PASS INDEL;BAVGPOST=0.999;BRSQ=0.691;LDAF=0.0023;AVGPOST=0.9988;RSQ=0.7606;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227519429 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9988;RSQ=0.9296;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 227519673 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.4122;AVGPOST=0.9955;RSQ=0.9920;ERATE=0.0006;THETA=0.0002;AC=899;AN=2184 GT:DS:GL:BD 0.41163003 0
1 227519733 . C CT 3170 PASS INDEL;BAVGPOST=0.978;BRSQ=0.758;LDAF=0.0460;AVGPOST=0.9760;RSQ=0.8090;ERATE=0.0004;THETA=0.0003;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 227519734 . T TA 683 PASS INDEL;BAVGPOST=0.971;BRSQ=0.712;LDAF=0.0566;AVGPOST=0.9586;RSQ=0.7166;ERATE=0.0023;THETA=0.0005;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 227519777 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.736;LDAF=0.0073;AVGPOST=0.9921;RSQ=0.6289;ERATE=0.0006;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227519804 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0994;AVGPOST=0.9952;RSQ=0.9783;ERATE=0.0006;THETA=0.0003;AC=216;AN=2184 GT:DS:GL:BD 0.09890110 0
1 227519867 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.599;LDAF=0.0055;AVGPOST=0.9916;RSQ=0.3799;ERATE=0.0008;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227519906 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.561;LDAF=0.0037;AVGPOST=0.9964;RSQ=0.5710;ERATE=0.0006;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227519924 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.927;LDAF=0.0783;AVGPOST=0.9975;RSQ=0.9863;ERATE=0.0004;THETA=0.0003;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 227519964 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.954;LDAF=0.3320;AVGPOST=0.9928;RSQ=0.9869;ERATE=0.0006;THETA=0.0002;AC=725;AN=2184 GT:DS:GL:BD 0.33195969 0
1 227520001 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0332;AVGPOST=0.9968;RSQ=0.9628;ERATE=0.0003;THETA=0.0002;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 227520123 rs57885454 TA T 9726 PASS INDEL;BAVGPOST=0.761;BRSQ=0.529;LDAF=0.6212;AVGPOST=0.7267;RSQ=0.5069;ERATE=0.0435;THETA=0.0009;AC=1405;AN=2184 GT:DS:GL:BD 0.64331502 1
1 227520260 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.760;LDAF=0.0076;AVGPOST=0.9952;RSQ=0.7647;ERATE=0.0006;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 227520503 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6162;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227520556 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.7386;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227520557 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0252;AVGPOST=0.9955;RSQ=0.9385;ERATE=0.0004;THETA=0.0003;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 227520592 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.7826;AVGPOST=0.9967;RSQ=0.9916;ERATE=0.0004;THETA=0.0004;AC=1712;AN=2184 GT:DS:GL:BD 0.78388280 1
1 227520610 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7113;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227520632 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227520639 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.670;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227520687 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9984;RSQ=0.8503;ERATE=0.0003;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227520712 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7425;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227521086 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6616;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227521143 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227521166 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8353;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227521206 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227521225 . AAC A 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.763;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5467;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227521278 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9927;ERATE=0.0002;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227521315 . GC G 74 PASS INDEL;BAVGPOST=1.000;BRSQ=0.745;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.5806;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227521416 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0018;AVGPOST=0.9993;RSQ=0.8292;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227521432 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0529;AVGPOST=0.9989;RSQ=0.9902;ERATE=0.0003;THETA=0.0008;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 227521469 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9914;ERATE=0.0002;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227521493 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.880;LDAF=0.0051;AVGPOST=0.9994;RSQ=0.9463;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227521640 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0408;AVGPOST=0.9997;RSQ=0.9971;ERATE=0.0002;THETA=0.0003;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 227521659 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227521763 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9013;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227521862 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.626;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6941;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227521891 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=0.9991;RSQ=0.8986;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227521917 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7723;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227521960 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.937;BRSQ=0.882;LDAF=0.3831;AVGPOST=0.9566;RSQ=0.9335;ERATE=0.0057;THETA=0.0004;AC=849;AN=2184 GT:DS:GL:BD 0.38873628 0
1 227521966 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.780;LDAF=0.0087;AVGPOST=0.9973;RSQ=0.8686;ERATE=0.0004;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 227522033 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.620;LDAF=0.0057;AVGPOST=0.9957;RSQ=0.6637;ERATE=0.0007;THETA=0.0019;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227522035 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0050;AVGPOST=0.9978;RSQ=0.8049;ERATE=0.0005;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227522121 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.593;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.5646;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227522150 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.822;LDAF=0.0257;AVGPOST=0.9962;RSQ=0.9415;ERATE=0.0006;THETA=0.0002;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 227522151 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.856;LDAF=0.0153;AVGPOST=0.9891;RSQ=0.7078;ERATE=0.0013;THETA=0.0002;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 227522241 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0794;AVGPOST=0.9975;RSQ=0.9863;ERATE=0.0006;THETA=0.0002;AC=172;AN=2184 GT:DS:GL:BD 0.07875458 0
1 227522339 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.670;LDAF=0.0020;AVGPOST=0.9968;RSQ=0.3203;ERATE=0.0008;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227522411 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.570;LDAF=0.0129;AVGPOST=0.9891;RSQ=0.6538;ERATE=0.0010;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 227522470 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.765;LDAF=0.0306;AVGPOST=0.9777;RSQ=0.7042;ERATE=0.0034;THETA=0.0003;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 227522609 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0087;AVGPOST=0.9977;RSQ=0.8954;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227522800 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.6433;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227522872 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7974;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227522900 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0019;AVGPOST=0.9991;RSQ=0.8360;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227522921 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0048;AVGPOST=0.9990;RSQ=0.9304;ERATE=0.0002;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227522966 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7452;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227522982 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8333;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227523153 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.9301;ERATE=0.0002;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227523214 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6046;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227523228 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7683;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227523231 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6011;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227523277 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0230;AVGPOST=0.9998;RSQ=0.9960;ERATE=0.0002;THETA=0.0003;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 227523283 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9545;ERATE=0.0003;THETA=0.0028;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227523297 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6168;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227523438 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7452;ERATE=0.0002;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227523744 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3298;AVGPOST=0.9993;RSQ=0.9986;ERATE=0.0003;THETA=0.0002;AC=719;AN=2184 GT:DS:GL:BD 0.32921246 0
1 227523753 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9365;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227523888 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6493;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227524018 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8741;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227524141 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3301;AVGPOST=0.9941;RSQ=0.9892;ERATE=0.0011;THETA=0.0019;AC=724;AN=2184 GT:DS:GL:BD 0.33150184 0
1 227524258 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0052;AVGPOST=0.9997;RSQ=0.9745;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227524335 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0394;AVGPOST=0.9995;RSQ=0.9954;ERATE=0.0002;THETA=0.0003;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 227524352 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3708;AVGPOST=0.9971;RSQ=0.9951;ERATE=0.0006;THETA=0.0002;AC=812;AN=2184 GT:DS:GL:BD 0.37179488 0
1 227524587 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227524594 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7210;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227524605 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6134;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227524673 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0992;AVGPOST=0.9996;RSQ=0.9980;ERATE=0.0003;THETA=0.0007;AC=217;AN=2184 GT:DS:GL:BD 0.09935898 0
1 227524717 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0084;AVGPOST=0.9996;RSQ=0.9805;ERATE=0.0002;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 227524782 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.736;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7529;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227524844 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227524891 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3704;AVGPOST=0.9978;RSQ=0.9961;ERATE=0.0006;THETA=0.0003;AC=810;AN=2184 GT:DS:GL:BD 0.37087911 0
1 227524926 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0065;AVGPOST=0.9997;RSQ=0.9797;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 227525084 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.873;LDAF=0.0037;AVGPOST=0.9994;RSQ=0.9306;ERATE=0.0002;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227525178 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227525183 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.7676;AVGPOST=0.9981;RSQ=0.9956;ERATE=0.0006;THETA=0.0002;AC=1678;AN=2184 GT:DS:GL:BD 0.76831502 1
1 227525339 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0094;AVGPOST=0.9990;RSQ=0.9530;ERATE=0.0002;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 227525395 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.767;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227525515 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.913;LDAF=0.0184;AVGPOST=0.9952;RSQ=0.9108;ERATE=0.0003;THETA=0.0006;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 227525523 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1315;AVGPOST=0.9971;RSQ=0.9916;ERATE=0.0002;THETA=0.0006;AC=289;AN=2184 GT:DS:GL:BD 0.13232601 0
1 227525552 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0143;AVGPOST=0.9987;RSQ=0.9680;ERATE=0.0003;THETA=0.0020;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 227525555 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6762;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227525685 . AG A 41 PASS INDEL;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0040;AVGPOST=0.9976;RSQ=0.7634;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227525716 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.972;LDAF=0.0955;AVGPOST=0.9967;RSQ=0.9852;ERATE=0.0003;THETA=0.0051;AC=211;AN=2184 GT:DS:GL:BD 0.09661172 0
1 227525744 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3380;AVGPOST=0.9979;RSQ=0.9964;ERATE=0.0003;THETA=0.0004;AC=738;AN=2184 GT:DS:GL:BD 0.33791208 0
1 227525760 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3314;AVGPOST=0.9977;RSQ=0.9960;ERATE=0.0003;THETA=0.0002;AC=723;AN=2184 GT:DS:GL:BD 0.33104396 0
1 227525777 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0115;AVGPOST=0.9995;RSQ=0.9799;ERATE=0.0003;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227525827 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.786;LDAF=0.0075;AVGPOST=0.9963;RSQ=0.7928;ERATE=0.0004;THETA=0.0033;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227525950 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5650;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227526014 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6280;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227526020 . AAAAG A 721 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0065;AVGPOST=0.9998;RSQ=0.9831;ERATE=0.0003;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 227526047 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5365;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227526118 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.988;LDAF=0.0414;AVGPOST=0.9947;RSQ=0.9500;ERATE=0.0008;THETA=0.0002;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 227526253 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.956;LDAF=0.7440;AVGPOST=0.9657;RSQ=0.9320;ERATE=0.0093;THETA=0.0004;AC=1640;AN=2184 GT:DS:GL:BD 0.75091577 1
1 227526263 . T TC 4738 PASS INDEL;BAVGPOST=0.871;BRSQ=0.713;LDAF=0.2653;AVGPOST=0.9094;RSQ=0.8365;ERATE=0.0059;THETA=0.0002;AC=600;AN=2184 GT:DS:GL:BD 0.27472529 0
1 227526264 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.974;LDAF=0.3378;AVGPOST=0.9863;RSQ=0.9771;ERATE=0.0044;THETA=0.0004;AC=738;AN=2184 GT:DS:GL:BD 0.33791208 0
1 227526386 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.901;LDAF=0.0439;AVGPOST=0.9906;RSQ=0.9215;ERATE=0.0003;THETA=0.0002;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 227526470 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.7994;ERATE=0.0003;THETA=0.0062;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227526477 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.3724;AVGPOST=0.9931;RSQ=0.9896;ERATE=0.0018;THETA=0.0002;AC=814;AN=2184 GT:DS:GL:BD 0.37271062 0
1 227526539 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.851;LDAF=0.0043;AVGPOST=0.9954;RSQ=0.5621;ERATE=0.0012;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227526605 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0034;AVGPOST=0.9990;RSQ=0.8702;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227526620 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3321;AVGPOST=0.9984;RSQ=0.9970;ERATE=0.0005;THETA=0.0002;AC=725;AN=2184 GT:DS:GL:BD 0.33195969 0
1 227526671 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0371;AVGPOST=0.9997;RSQ=0.9965;ERATE=0.0003;THETA=0.0002;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 227526867 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227526891 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227526928 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.862;LDAF=0.0037;AVGPOST=0.9983;RSQ=0.8275;ERATE=0.0003;THETA=0.0017;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227526934 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0052;AVGPOST=0.9993;RSQ=0.9449;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227526946 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7739;AVGPOST=0.9994;RSQ=0.9985;ERATE=0.0003;THETA=0.0002;AC=1691;AN=2184 GT:DS:GL:BD 0.77426738 1
1 227527274 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.804;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.8085;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227527456 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227527475 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.999;LDAF=0.3318;AVGPOST=0.9992;RSQ=0.9984;ERATE=0.0004;THETA=0.0004;AC=724;AN=2184 GT:DS:GL:BD 0.33150184 0
1 227527770 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7373;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227527776 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6768;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227527856 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6384;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227527871 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.947;LDAF=0.0379;AVGPOST=0.9959;RSQ=0.9579;ERATE=0.0004;THETA=0.0003;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 227527942 . CTG C 1025 PASS INDEL;BAVGPOST=0.998;BRSQ=0.836;LDAF=0.0084;AVGPOST=0.9964;RSQ=0.8521;ERATE=0.0003;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 227527965 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5763;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227527973 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0140;AVGPOST=0.9991;RSQ=0.9801;ERATE=0.0002;THETA=0.0002;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 227527974 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0144;AVGPOST=0.9983;RSQ=0.9613;ERATE=0.0003;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 227527992 . TA T 75 PASS INDEL;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227527998 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0046;AVGPOST=0.9996;RSQ=0.9575;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227528006 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0021;AVGPOST=0.9991;RSQ=0.8196;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227528075 rs57188585 GC G 34042 PASS INDEL;BAVGPOST=0.991;BRSQ=0.982;LDAF=0.3319;AVGPOST=0.9968;RSQ=0.9942;ERATE=0.0006;THETA=0.0002;AC=724;AN=2184 GT:DS:GL:BD 0.33150184 0
1 227528103 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.6812;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227528115 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1571;AVGPOST=0.9986;RSQ=0.9957;ERATE=0.0003;THETA=0.0003;AC=344;AN=2184 GT:DS:GL:BD 0.15750916 0
1 227528227 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6225;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227528257 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6460;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227528260 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0385;AVGPOST=0.9998;RSQ=0.9981;ERATE=0.0002;THETA=0.0003;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 227528264 . C CT 250 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227528317 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9797;ERATE=0.0002;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227528454 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7549;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227528485 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7575;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227528489 . CTCT C 184 PASS INDEL;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0037;AVGPOST=0.9995;RSQ=0.9421;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227528491 . C CT 93 PASS INDEL;BAVGPOST=0.998;BRSQ=0.691;LDAF=0.0025;AVGPOST=0.9985;RSQ=0.7553;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227528542 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1564;AVGPOST=0.9994;RSQ=0.9980;ERATE=0.0003;THETA=0.0002;AC=342;AN=2184 GT:DS:GL:BD 0.15659341 0
1 227528680 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8757;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227528802 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.1311;AVGPOST=0.9956;RSQ=0.9874;ERATE=0.0003;THETA=0.0003;AC=287;AN=2184 GT:DS:GL:BD 0.13141026 0
1 227528921 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.879;LDAF=0.0109;AVGPOST=0.9977;RSQ=0.9242;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 227529104 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0386;AVGPOST=0.9993;RSQ=0.9925;ERATE=0.0003;THETA=0.0004;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 227529144 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9882;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227529151 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5617;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227529172 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7186;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227529286 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3845;AVGPOST=0.9991;RSQ=0.9983;ERATE=0.0004;THETA=0.0007;AC=841;AN=2184 GT:DS:GL:BD 0.38507327 0
1 227529360 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0022;AVGPOST=0.9997;RSQ=0.9415;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227529449 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7298;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227529563 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0042;AVGPOST=0.9989;RSQ=0.8994;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227529567 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.8957;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227529593 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7129;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227529626 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0093;AVGPOST=0.9994;RSQ=0.9804;ERATE=0.0002;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 227529680 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.683;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6599;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227529948 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.9055;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227529989 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.615;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5134;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227530089 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4924;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227530286 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0288;AVGPOST=0.9991;RSQ=0.9884;ERATE=0.0002;THETA=0.0003;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 227530388 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0018;AVGPOST=0.9997;RSQ=0.9270;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227530421 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0147;AVGPOST=0.9993;RSQ=0.9839;ERATE=0.0002;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 227530778 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0329;AVGPOST=0.9975;RSQ=0.9735;ERATE=0.0003;THETA=0.0004;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 227530885 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0015;AVGPOST=0.9982;RSQ=0.4885;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227530925 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0339;AVGPOST=0.9998;RSQ=0.9968;ERATE=0.0003;THETA=0.0004;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 227531054 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7691;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227531107 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0096;AVGPOST=0.9992;RSQ=0.9672;ERATE=0.0003;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 227531128 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0148;AVGPOST=0.9991;RSQ=0.9778;ERATE=0.0003;THETA=0.0005;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 227531222 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9997;AVGPOST=0.9994;RSQ=0.1137;ERATE=0.0003;THETA=0.0003;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 227531269 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.7579;AVGPOST=0.9960;RSQ=0.9916;ERATE=0.0007;THETA=0.0006;AC=1655;AN=2184 GT:DS:GL:BD 0.75778389 1
1 227531285 . GC G 2291 PASS INDEL;BAVGPOST=0.906;BRSQ=0.802;LDAF=0.2591;AVGPOST=0.9115;RSQ=0.8456;ERATE=0.0071;THETA=0.0005;AC=583;AN=2184 GT:DS:GL:BD 0.26694140 0
1 227531286 rs67970749 CT C 30643 PASS INDEL;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.3216;AVGPOST=0.9951;RSQ=0.9908;ERATE=0.0005;THETA=0.0002;AC=702;AN=2184 GT:DS:GL:BD 0.32142857 0
1 227531296 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.848;LDAF=0.0047;AVGPOST=0.9988;RSQ=0.8892;ERATE=0.0003;THETA=0.0022;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227531543 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7064;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227531559 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6944;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227531684 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0068;AVGPOST=0.9993;RSQ=0.9541;ERATE=0.0004;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 227531882 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227531919 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0030;AVGPOST=0.9986;RSQ=0.8307;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227531935 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6263;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227531958 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9090;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227532058 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6995;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227532129 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.7489;AVGPOST=0.9962;RSQ=0.9925;ERATE=0.0005;THETA=0.0003;AC=1637;AN=2184 GT:DS:GL:BD 0.74954212 1
1 227532143 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5518;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227532198 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227532259 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.984;LDAF=0.3275;AVGPOST=0.9911;RSQ=0.9853;ERATE=0.0007;THETA=0.0009;AC=719;AN=2184 GT:DS:GL:BD 0.32921246 0
1 227532291 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.962;LDAF=0.3244;AVGPOST=0.9875;RSQ=0.9796;ERATE=0.0004;THETA=0.0002;AC=715;AN=2184 GT:DS:GL:BD 0.32738096 0
1 227532295 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.965;BRSQ=0.933;LDAF=0.3452;AVGPOST=0.9481;RSQ=0.9140;ERATE=0.0166;THETA=0.0006;AC=743;AN=2184 GT:DS:GL:BD 0.34020147 0
1 227532317 . G GTA 1060 PASS INDEL;BAVGPOST=0.907;BRSQ=0.637;LDAF=0.1670;AVGPOST=0.8833;RSQ=0.6597;ERATE=0.0285;THETA=0.0027;AC=307;AN=2184 GT:DS:GL:BD 0.14056776 0
1 227532319 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.606;LDAF=0.0032;AVGPOST=0.9962;RSQ=0.5322;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227532395 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0291;AVGPOST=0.9984;RSQ=0.9789;ERATE=0.0003;THETA=0.0030;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 227532479 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227532607 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0037;AVGPOST=0.9991;RSQ=0.8968;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227532622 rs5781481 C CA 8028 PASS INDEL;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1152;AVGPOST=0.9928;RSQ=0.9749;ERATE=0.0004;THETA=0.0004;AC=248;AN=2184 GT:DS:GL:BD 0.11355311 0
1 227532752 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0198;AVGPOST=0.9995;RSQ=0.9906;ERATE=0.0003;THETA=0.0005;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 227532767 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.726;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6184;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227533052 . T TG 63 PASS INDEL;BAVGPOST=0.854;BRSQ=0.123;LDAF=0.2307;AVGPOST=0.6915;RSQ=0.2972;ERATE=0.0245;THETA=0.0004;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 227533076 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.898;LDAF=0.0021;AVGPOST=0.9990;RSQ=0.8304;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227533234 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9436;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227533242 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0018;AVGPOST=0.9974;RSQ=0.3869;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227533251 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.738;LDAF=0.0025;AVGPOST=0.9975;RSQ=0.6082;ERATE=0.0009;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227533287 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6818;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227533336 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227533525 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.959;LDAF=0.0554;AVGPOST=0.9993;RSQ=0.9950;ERATE=0.0002;THETA=0.0008;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 227533691 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0079;AVGPOST=0.9979;RSQ=0.8956;ERATE=0.0003;THETA=0.0001;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 227533696 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7349;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227533743 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5434;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227533887 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.952;LDAF=0.0183;AVGPOST=0.9991;RSQ=0.9806;ERATE=0.0004;THETA=0.0007;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 227533915 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3301;AVGPOST=0.9947;RSQ=0.9915;ERATE=0.0008;THETA=0.0004;AC=719;AN=2184 GT:DS:GL:BD 0.32921246 0
1 227533949 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.869;LDAF=0.0139;AVGPOST=0.9963;RSQ=0.8840;ERATE=0.0003;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 227534158 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7556;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227534286 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8410;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227534440 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.921;LDAF=0.0185;AVGPOST=0.9978;RSQ=0.9572;ERATE=0.0003;THETA=0.0005;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 227534651 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0198;AVGPOST=0.9997;RSQ=0.9935;ERATE=0.0003;THETA=0.0002;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 227534675 . TG T 15315 PASS INDEL;BAVGPOST=0.799;BRSQ=0.681;LDAF=0.5340;AVGPOST=0.7952;RSQ=0.7016;ERATE=0.0391;THETA=0.0005;AC=1145;AN=2184 GT:DS:GL:BD 0.52426738 1
1 227534677 rs3014264 G GA 21464 PASS INDEL;BAVGPOST=0.941;BRSQ=0.894;LDAF=0.3547;AVGPOST=0.9060;RSQ=0.8489;ERATE=0.0154;THETA=0.0004;AC=744;AN=2184 GT:DS:GL:BD 0.34065935 0
1 227534678 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.959;BRSQ=0.908;LDAF=0.7472;AVGPOST=0.9347;RSQ=0.8764;ERATE=0.0145;THETA=0.0006;AC=1666;AN=2184 GT:DS:GL:BD 0.76282054 1
1 227534678 . G GAA 37432 PASS INDEL;BAVGPOST=0.979;BRSQ=0.959;LDAF=0.7814;AVGPOST=0.9791;RSQ=0.9523;ERATE=0.0018;THETA=0.0004;AC=1716;AN=2184 GT:DS:GL:BD 0.78571427 1
1 227534971 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.748;LDAF=0.0031;AVGPOST=0.9970;RSQ=0.6352;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227535059 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0036;AVGPOST=0.9991;RSQ=0.8973;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227535134 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7486;AVGPOST=0.9941;RSQ=0.9883;ERATE=0.0007;THETA=0.0003;AC=1640;AN=2184 GT:DS:GL:BD 0.75091577 1
1 227535145 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.7719;AVGPOST=0.9955;RSQ=0.9895;ERATE=0.0007;THETA=0.0008;AC=1689;AN=2184 GT:DS:GL:BD 0.77335167 1
1 227535189 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.7475;AVGPOST=0.9942;RSQ=0.9879;ERATE=0.0005;THETA=0.0027;AC=1637;AN=2184 GT:DS:GL:BD 0.74954212 1
1 227535297 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.790;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7679;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227535306 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.735;LDAF=0.0021;AVGPOST=0.9987;RSQ=0.7936;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227535337 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.3835;AVGPOST=0.9900;RSQ=0.9845;ERATE=0.0018;THETA=0.0010;AC=840;AN=2184 GT:DS:GL:BD 0.38461539 0
1 227535418 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0320;AVGPOST=0.9998;RSQ=0.9973;ERATE=0.0002;THETA=0.0005;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 227535532 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0279;AVGPOST=0.9990;RSQ=0.9841;ERATE=0.0004;THETA=0.0005;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 227535540 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227535648 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6008;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227535680 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0120;AVGPOST=0.9996;RSQ=0.9834;ERATE=0.0003;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227535745 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0285;AVGPOST=0.9997;RSQ=0.9956;ERATE=0.0002;THETA=0.0003;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 227535969 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6643;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227535971 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.666;LDAF=0.0022;AVGPOST=0.9988;RSQ=0.7862;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227536075 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0022;AVGPOST=0.9997;RSQ=0.9436;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227536084 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.986;LDAF=0.3296;AVGPOST=0.9942;RSQ=0.9902;ERATE=0.0007;THETA=0.0009;AC=721;AN=2184 GT:DS:GL:BD 0.33012819 0
1 227536087 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0285;AVGPOST=0.9997;RSQ=0.9948;ERATE=0.0003;THETA=0.0004;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 227536107 . G GTA 308 PASS INDEL;BAVGPOST=0.996;BRSQ=0.686;LDAF=0.0100;AVGPOST=0.9881;RSQ=0.5256;ERATE=0.0021;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227536182 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.730;LDAF=0.0049;AVGPOST=0.9979;RSQ=0.8346;ERATE=0.0005;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227536205 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.712;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6392;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227536216 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.3748;AVGPOST=0.9965;RSQ=0.9937;ERATE=0.0006;THETA=0.0004;AC=820;AN=2184 GT:DS:GL:BD 0.37545788 0
1 227536287 . CT C 82 PASS INDEL;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.5355;ERATE=0.0006;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227536463 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0292;AVGPOST=0.9982;RSQ=0.9789;ERATE=0.0003;THETA=0.0003;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 227536669 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0307;AVGPOST=0.9955;RSQ=0.9422;ERATE=0.0006;THETA=0.0003;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 227536703 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.722;LDAF=0.0027;AVGPOST=0.9974;RSQ=0.6254;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227536704 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.656;LDAF=0.0042;AVGPOST=0.9947;RSQ=0.4934;ERATE=0.0006;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227536937 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0034;AVGPOST=0.9984;RSQ=0.8460;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227536941 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.396;LDAF=0.0039;AVGPOST=0.9966;RSQ=0.6367;ERATE=0.0007;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227536999 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0370;AVGPOST=0.9969;RSQ=0.9665;ERATE=0.0003;THETA=0.0004;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 227537076 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.666;LDAF=0.0010;AVGPOST=0.9987;RSQ=0.5068;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227537099 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0026;AVGPOST=0.9969;RSQ=0.4849;ERATE=0.0005;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227537119 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4377;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227537236 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0657;AVGPOST=0.9984;RSQ=0.9893;ERATE=0.0003;THETA=0.0001;AC=144;AN=2184 GT:DS:GL:BD 0.06593407 0
1 227537248 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0342;AVGPOST=0.9992;RSQ=0.9919;ERATE=0.0002;THETA=0.0045;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 227537446 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6580;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227537473 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.873;LDAF=0.0046;AVGPOST=0.9980;RSQ=0.8286;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227537529 . C CA 22 PASS INDEL;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6334;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227537563 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6034;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227537592 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9103;ERATE=0.0003;THETA=0.0017;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227537599 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5746;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227537655 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.7068;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227537705 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227537774 . A ATGTC 205 PASS INDEL;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6983;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227537777 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.930;LDAF=0.0111;AVGPOST=0.9973;RSQ=0.9022;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 227538057 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0018;AVGPOST=0.9997;RSQ=0.9357;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227538203 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0060;AVGPOST=0.9963;RSQ=0.7858;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227538487 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.989;LDAF=0.3487;AVGPOST=0.9876;RSQ=0.9795;ERATE=0.0028;THETA=0.0002;AC=763;AN=2184 GT:DS:GL:BD 0.34935898 0
1 227538493 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.991;LDAF=0.4062;AVGPOST=0.9958;RSQ=0.9929;ERATE=0.0007;THETA=0.0004;AC=888;AN=2184 GT:DS:GL:BD 0.40659341 0
1 227538511 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0067;AVGPOST=0.9973;RSQ=0.8480;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 227538605 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3389;AVGPOST=0.9986;RSQ=0.9974;ERATE=0.0004;THETA=0.0003;AC=739;AN=2184 GT:DS:GL:BD 0.33836997 0
1 227538673 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6555;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227538696 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.5049;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227538753 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5252;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227538807 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5542;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227538871 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.0019;AVGPOST=0.9996;RSQ=0.9027;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227538971 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7149;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227539033 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8551;ERATE=0.0003;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227539055 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0285;AVGPOST=0.9995;RSQ=0.9926;ERATE=0.0003;THETA=0.0003;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 227539132 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.8130;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227539205 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.8918;AVGPOST=0.9972;RSQ=0.9886;ERATE=0.0003;THETA=0.0003;AC=1947;AN=2184 GT:DS:GL:BD 0.89148355 1
1 227539360 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0037;AVGPOST=0.9978;RSQ=0.7635;ERATE=0.0006;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227539453 . G GA 1180 PASS INDEL;BAVGPOST=0.993;BRSQ=0.723;LDAF=0.0181;AVGPOST=0.9849;RSQ=0.7039;ERATE=0.0006;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 227539463 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.5438;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227539484 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0038;AVGPOST=0.9979;RSQ=0.7704;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227539495 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0015;AVGPOST=0.9982;RSQ=0.5091;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227539529 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0285;AVGPOST=0.9995;RSQ=0.9910;ERATE=0.0003;THETA=0.0008;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 227539556 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6878;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227539576 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0077;AVGPOST=0.9986;RSQ=0.9370;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227539723 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0091;AVGPOST=0.9983;RSQ=0.9311;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 227539724 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0021;AVGPOST=0.9974;RSQ=0.5592;ERATE=0.0002;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227540030 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3395;AVGPOST=0.9939;RSQ=0.9888;ERATE=0.0012;THETA=0.0003;AC=739;AN=2184 GT:DS:GL:BD 0.33836997 0
1 227540058 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0008;AVGPOST=0.9984;RSQ=0.3873;ERATE=0.0003;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 227540316 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.934;LDAF=0.0270;AVGPOST=0.9969;RSQ=0.9521;ERATE=0.0002;THETA=0.0002;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 227540340 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227540361 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227540372 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.989;LDAF=0.7596;AVGPOST=0.9806;RSQ=0.9613;ERATE=0.0031;THETA=0.0002;AC=1667;AN=2184 GT:DS:GL:BD 0.76327837 1
1 227540399 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5382;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227540429 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227540452 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227540456 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.7960;AVGPOST=0.9984;RSQ=0.9959;ERATE=0.0003;THETA=0.0004;AC=1740;AN=2184 GT:DS:GL:BD 0.79670328 1
1 227540522 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227540571 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9905;ERATE=0.0003;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 227540637 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.8087;ERATE=0.0011;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227540676 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9667;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227540776 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0077;AVGPOST=0.9992;RSQ=0.9588;ERATE=0.0002;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 227540880 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0679;AVGPOST=0.9994;RSQ=0.9958;ERATE=0.0002;THETA=0.0003;AC=148;AN=2184 GT:DS:GL:BD 0.06776557 0
1 227540994 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9035;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227541193 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9362;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227541384 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0018;AVGPOST=0.9998;RSQ=0.9459;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227541467 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0037;AVGPOST=0.9996;RSQ=0.9566;ERATE=0.0002;THETA=0.0014;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227541552 . AT A 123 PASS INDEL;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6715;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227541577 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9998;RSQ=0.9872;ERATE=0.0002;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 227541585 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5045;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227541642 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.879;LDAF=0.0044;AVGPOST=0.9985;RSQ=0.8776;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227541762 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.788;LDAF=0.0026;AVGPOST=0.9986;RSQ=0.8035;ERATE=0.0002;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227541790 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.864;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7705;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227541999 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0201;AVGPOST=0.9997;RSQ=0.9940;ERATE=0.0002;THETA=0.0002;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 227542135 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227542190 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0180;AVGPOST=0.9991;RSQ=0.9832;ERATE=0.0002;THETA=0.0007;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 227542218 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7710;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227542229 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4143;AVGPOST=0.9966;RSQ=0.9947;ERATE=0.0008;THETA=0.0006;AC=904;AN=2184 GT:DS:GL:BD 0.41391942 0
1 227542239 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227542463 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0031;AVGPOST=0.9985;RSQ=0.8386;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227542661 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227542782 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0202;AVGPOST=0.9999;RSQ=0.9981;ERATE=0.0002;THETA=0.0006;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 227542811 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3385;AVGPOST=0.9983;RSQ=0.9968;ERATE=0.0004;THETA=0.0004;AC=739;AN=2184 GT:DS:GL:BD 0.33836997 0
1 227542831 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227542875 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227542915 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0196;AVGPOST=0.9986;RSQ=0.9760;ERATE=0.0003;THETA=0.0005;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 227543027 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4056;AVGPOST=0.9976;RSQ=0.9961;ERATE=0.0006;THETA=0.0002;AC=886;AN=2184 GT:DS:GL:BD 0.40567765 0
1 227543042 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0033;AVGPOST=0.9996;RSQ=0.9510;ERATE=0.0002;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227543117 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.6973;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227543180 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6937;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227543249 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9998;RSQ=0.9872;ERATE=0.0002;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 227543291 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0040;AVGPOST=0.9972;RSQ=0.7109;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227543344 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.645;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.7217;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227543381 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7038;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227543429 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7138;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227543434 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.4056;AVGPOST=0.9989;RSQ=0.9980;ERATE=0.0003;THETA=0.0003;AC=886;AN=2184 GT:DS:GL:BD 0.40567765 0
1 227543455 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6656;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227543581 rs72235026 TTTCTAA T 13100 PASS INDEL;BAVGPOST=0.995;BRSQ=0.961;LDAF=0.0678;AVGPOST=0.9989;RSQ=0.9917;ERATE=0.0005;THETA=0.0004;AC=148;AN=2184 GT:DS:GL:BD 0.06776557 0
1 227543677 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.866;LDAF=0.0048;AVGPOST=0.9973;RSQ=0.7560;ERATE=0.0007;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227543693 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0688;AVGPOST=0.9994;RSQ=0.9955;ERATE=0.0004;THETA=0.0007;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 227543695 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4807;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227543711 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3378;AVGPOST=0.9973;RSQ=0.9950;ERATE=0.0009;THETA=0.0005;AC=738;AN=2184 GT:DS:GL:BD 0.33791208 0
1 227543783 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227543804 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5775;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227543899 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.4393;AVGPOST=0.9978;RSQ=0.9965;ERATE=0.0004;THETA=0.0004;AC=961;AN=2184 GT:DS:GL:BD 0.44001833 0
1 227543902 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0025;AVGPOST=0.9988;RSQ=0.8059;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227543972 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.590;LDAF=0.0047;AVGPOST=0.9951;RSQ=0.6442;ERATE=0.0005;THETA=0.0001;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227544002 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.7884;AVGPOST=0.9909;RSQ=0.9787;ERATE=0.0017;THETA=0.0006;AC=1726;AN=2184 GT:DS:GL:BD 0.79029304 1
1 227544066 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0027;AVGPOST=0.9967;RSQ=0.4896;ERATE=0.0006;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227544115 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.709;LDAF=0.0027;AVGPOST=0.9975;RSQ=0.6301;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227544129 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.570;LDAF=0.0078;AVGPOST=0.9966;RSQ=0.8157;ERATE=0.0005;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 227544241 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0029;AVGPOST=0.9991;RSQ=0.8765;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227544266 rs67777238 G GA 47956 PASS INDEL;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.4413;AVGPOST=0.9873;RSQ=0.9806;ERATE=0.0025;THETA=0.0002;AC=962;AN=2184 GT:DS:GL:BD 0.44047618 0
1 227544298 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4486;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227544307 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227544355 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5491;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227544513 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3383;AVGPOST=0.9991;RSQ=0.9983;ERATE=0.0005;THETA=0.0016;AC=738;AN=2184 GT:DS:GL:BD 0.33791208 0
1 227544547 . AC A 37 PASS INDEL;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0029;AVGPOST=0.9980;RSQ=0.7309;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227544682 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6304;ERATE=0.0008;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227544702 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0678;AVGPOST=0.9997;RSQ=0.9978;ERATE=0.0002;THETA=0.0002;AC=148;AN=2184 GT:DS:GL:BD 0.06776557 0
1 227544707 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3382;AVGPOST=0.9996;RSQ=0.9993;ERATE=0.0003;THETA=0.0003;AC=738;AN=2184 GT:DS:GL:BD 0.33791208 0
1 227544762 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.933;LDAF=0.0165;AVGPOST=0.9963;RSQ=0.9124;ERATE=0.0003;THETA=0.0002;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 227544763 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6746;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227544798 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8688;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227544824 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0201;AVGPOST=0.9998;RSQ=0.9962;ERATE=0.0003;THETA=0.0004;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 227544832 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227544835 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0354;AVGPOST=0.9994;RSQ=0.9933;ERATE=0.0003;THETA=0.0002;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 227544843 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.981;LDAF=0.1423;AVGPOST=0.9933;RSQ=0.9792;ERATE=0.0005;THETA=0.0003;AC=309;AN=2184 GT:DS:GL:BD 0.14148352 0
1 227544954 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3382;AVGPOST=0.9996;RSQ=0.9992;ERATE=0.0003;THETA=0.0004;AC=738;AN=2184 GT:DS:GL:BD 0.33791208 0
1 227544969 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8118;ERATE=0.0002;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227545068 . T TA 133 PASS INDEL;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0024;AVGPOST=0.9981;RSQ=0.6966;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227545244 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0028;AVGPOST=0.9992;RSQ=0.8714;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227545297 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6340;ERATE=0.0002;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227545363 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7921;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227545421 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0070;AVGPOST=0.9997;RSQ=0.9811;ERATE=0.0003;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 227545564 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9316;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227545608 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4310;AVGPOST=0.9988;RSQ=0.9978;ERATE=0.0003;THETA=0.0002;AC=941;AN=2184 GT:DS:GL:BD 0.43086082 0
1 227545658 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0016;AVGPOST=0.9982;RSQ=0.5655;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227545672 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0059;AVGPOST=0.9993;RSQ=0.9467;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227545761 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.9018;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227545868 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3597;AVGPOST=0.9983;RSQ=0.9969;ERATE=0.0003;THETA=0.0006;AC=784;AN=2184 GT:DS:GL:BD 0.35897437 0
1 227545953 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0032;AVGPOST=0.9987;RSQ=0.8385;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227545958 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.787;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.7943;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227546099 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.712;LDAF=0.0079;AVGPOST=0.9922;RSQ=0.6347;ERATE=0.0008;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227546152 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.688;LDAF=0.0086;AVGPOST=0.9907;RSQ=0.5800;ERATE=0.0013;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227546187 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6374;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227546244 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5468;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227546273 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6620;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227546299 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7497;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227546394 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0089;AVGPOST=0.9996;RSQ=0.9796;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 227546483 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0003;AVGPOST=0.9995;RSQ=0.5211;ERATE=0.0002;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 227546617 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0678;AVGPOST=0.9997;RSQ=0.9981;ERATE=0.0003;THETA=0.0002;AC=148;AN=2184 GT:DS:GL:BD 0.06776557 0
1 227546778 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6753;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227546786 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0048;AVGPOST=0.9994;RSQ=0.9471;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227546789 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5687;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227546953 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.4892;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227546985 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.742;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.5913;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227547023 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0035;AVGPOST=0.9976;RSQ=0.7371;ERATE=0.0002;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227547033 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0676;AVGPOST=0.9999;RSQ=0.9993;ERATE=0.0002;THETA=0.0003;AC=148;AN=2184 GT:DS:GL:BD 0.06776557 0
1 227547045 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.835;LDAF=0.0026;AVGPOST=0.9984;RSQ=0.7346;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227547180 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0673;AVGPOST=0.9988;RSQ=0.9938;ERATE=0.0003;THETA=0.0004;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 227547185 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227547226 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0015;AVGPOST=0.9993;RSQ=0.7775;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227547299 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0677;AVGPOST=0.9998;RSQ=0.9983;ERATE=0.0002;THETA=0.0003;AC=148;AN=2184 GT:DS:GL:BD 0.06776557 0
1 227547509 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227547548 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7256;AVGPOST=0.9989;RSQ=0.9976;ERATE=0.0004;THETA=0.0002;AC=1586;AN=2184 GT:DS:GL:BD 0.72619045 1
1 227547587 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.950;LDAF=0.0200;AVGPOST=0.9982;RSQ=0.9624;ERATE=0.0003;THETA=0.0008;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 227547699 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227547725 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7543;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227547765 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0172;AVGPOST=0.9972;RSQ=0.9353;ERATE=0.0003;THETA=0.0005;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 227547770 . AAG A 41 PASS INDEL;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4997;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227547804 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8306;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227547838 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227547887 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227547888 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3635;AVGPOST=0.9984;RSQ=0.9973;ERATE=0.0004;THETA=0.0002;AC=793;AN=2184 GT:DS:GL:BD 0.36309522 0
1 227547895 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0684;AVGPOST=0.9989;RSQ=0.9933;ERATE=0.0004;THETA=0.0003;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 227547945 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.700;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6094;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227548021 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7790;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227548033 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.987;LDAF=0.3391;AVGPOST=0.9894;RSQ=0.9810;ERATE=0.0014;THETA=0.0003;AC=740;AN=2184 GT:DS:GL:BD 0.33882785 0
1 227548041 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0057;AVGPOST=0.9979;RSQ=0.8547;ERATE=0.0007;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227548162 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7640;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227548171 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7469;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227548196 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5632;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227548304 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6053;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227548424 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8237;ERATE=0.0002;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227548499 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7648;AVGPOST=0.9984;RSQ=0.9962;ERATE=0.0004;THETA=0.0002;AC=1672;AN=2184 GT:DS:GL:BD 0.76556778 1
1 227548561 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6133;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227548573 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.813;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8678;ERATE=0.0002;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227548685 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227548709 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7931;AVGPOST=0.9988;RSQ=0.9969;ERATE=0.0004;THETA=0.0005;AC=1734;AN=2184 GT:DS:GL:BD 0.79395604 1
1 227548734 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6374;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227548759 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3604;AVGPOST=0.9976;RSQ=0.9962;ERATE=0.0003;THETA=0.0004;AC=787;AN=2184 GT:DS:GL:BD 0.36034799 0
1 227548777 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0084;AVGPOST=0.9996;RSQ=0.9771;ERATE=0.0002;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 227548826 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0003;AVGPOST=0.9994;RSQ=0.3872;ERATE=0.0003;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 227548863 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3395;AVGPOST=0.9985;RSQ=0.9970;ERATE=0.0005;THETA=0.0003;AC=740;AN=2184 GT:DS:GL:BD 0.33882785 0
1 227548971 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6437;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227549118 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.7927;AVGPOST=0.9962;RSQ=0.9910;ERATE=0.0005;THETA=0.0026;AC=1731;AN=2184 GT:DS:GL:BD 0.79258239 1
1 227549156 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.765;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4564;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227549439 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0024;AVGPOST=0.9990;RSQ=0.8361;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227549475 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5877;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227549509 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0061;AVGPOST=0.9984;RSQ=0.8869;ERATE=0.0004;THETA=0.0012;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227549604 . T TC 46 PASS INDEL;BAVGPOST=0.999;BRSQ=0.802;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5519;ERATE=0.0006;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227549996 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0019;AVGPOST=0.9986;RSQ=0.6866;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227550137 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0806;AVGPOST=0.9995;RSQ=0.9969;ERATE=0.0002;THETA=0.0003;AC=176;AN=2184 GT:DS:GL:BD 0.08058608 0
1 227550446 . ATTTTTTTC A 3925 PASS INDEL;BAVGPOST=0.985;BRSQ=0.838;LDAF=0.0478;AVGPOST=0.9907;RSQ=0.9232;ERATE=0.0008;THETA=0.0042;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 227550462 . CTTTTTTTCT C 5490 PASS INDEL;BAVGPOST=0.971;BRSQ=0.725;LDAF=0.0750;AVGPOST=0.9405;RSQ=0.6903;ERATE=0.0074;THETA=0.0007;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 227550528 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0079;AVGPOST=0.9984;RSQ=0.9161;ERATE=0.0003;THETA=0.0051;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227550568 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.968;LDAF=0.3697;AVGPOST=0.8981;RSQ=0.8261;ERATE=0.0138;THETA=0.0003;AC=786;AN=2184 GT:DS:GL:BD 0.35989010 0
1 227550700 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.951;LDAF=0.2778;AVGPOST=0.9826;RSQ=0.9646;ERATE=0.0010;THETA=0.0022;AC=611;AN=2184 GT:DS:GL:BD 0.27976191 0
1 227550709 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.512;LDAF=0.0136;AVGPOST=0.9906;RSQ=0.7269;ERATE=0.0007;THETA=0.0013;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 227550710 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.682;LDAF=0.0158;AVGPOST=0.9831;RSQ=0.6288;ERATE=0.0009;THETA=0.0009;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 227550746 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.875;LDAF=0.0177;AVGPOST=0.9914;RSQ=0.8317;ERATE=0.0006;THETA=0.0023;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 227550755 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0080;AVGPOST=0.9963;RSQ=0.8082;ERATE=0.0006;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 227550929 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.7797;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227550956 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227550965 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0051;AVGPOST=0.9997;RSQ=0.9710;ERATE=0.0002;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227550976 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0796;AVGPOST=0.9987;RSQ=0.9936;ERATE=0.0003;THETA=0.0006;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 227550993 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0353;AVGPOST=0.9994;RSQ=0.9921;ERATE=0.0005;THETA=0.0005;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 227551287 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0035;AVGPOST=0.9991;RSQ=0.8830;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227551316 . TC T 236 PASS INDEL;BAVGPOST=0.999;BRSQ=0.774;LDAF=0.0024;AVGPOST=0.9984;RSQ=0.7004;ERATE=0.0005;THETA=0.0040;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227551426 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0026;AVGPOST=0.9989;RSQ=0.8403;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227551436 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0080;AVGPOST=0.9987;RSQ=0.9277;ERATE=0.0004;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 227551444 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9119;ERATE=0.0004;THETA=0.0011;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227551484 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0342;AVGPOST=0.9984;RSQ=0.9842;ERATE=0.0003;THETA=0.0003;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 227551792 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.860;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8467;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227551878 . A AC 330 PASS INDEL;BAVGPOST=0.998;BRSQ=0.765;LDAF=0.0041;AVGPOST=0.9973;RSQ=0.7272;ERATE=0.0004;THETA=0.0049;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227551987 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.903;LDAF=0.0226;AVGPOST=0.9953;RSQ=0.9200;ERATE=0.0006;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 227552055 . A AG 13730 PASS INDEL;BAVGPOST=0.976;BRSQ=0.956;LDAF=0.3681;AVGPOST=0.9787;RSQ=0.9646;ERATE=0.0010;THETA=0.0006;AC=810;AN=2184 GT:DS:GL:BD 0.37087911 0
1 227552057 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.948;BRSQ=0.889;LDAF=0.3486;AVGPOST=0.9321;RSQ=0.8778;ERATE=0.0166;THETA=0.0004;AC=767;AN=2184 GT:DS:GL:BD 0.35119048 0
1 227552111 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0045;AVGPOST=0.9988;RSQ=0.8976;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227552199 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0075;AVGPOST=0.9978;RSQ=0.9011;ERATE=0.0002;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 227552200 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0076;AVGPOST=0.9975;RSQ=0.8899;ERATE=0.0002;THETA=0.0008;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 227552226 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7523;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227552273 . A AT 36 PASS INDEL;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227552274 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6954;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227552328 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7230;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227552381 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6952;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227552494 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0747;AVGPOST=0.9996;RSQ=0.9977;ERATE=0.0003;THETA=0.0003;AC=163;AN=2184 GT:DS:GL:BD 0.07463370 0
1 227552505 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9822;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227552550 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9843;ERATE=0.0003;THETA=0.0010;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227552551 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5835;ERATE=0.0003;THETA=0.0040;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227552678 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9420;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227552909 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227552917 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7189;AVGPOST=0.9993;RSQ=0.9984;ERATE=0.0002;THETA=0.0006;AC=1570;AN=2184 GT:DS:GL:BD 0.71886444 1
1 227552945 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9499;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227553113 . C CG 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7393;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227553319 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3763;AVGPOST=0.9971;RSQ=0.9951;ERATE=0.0003;THETA=0.0003;AC=820;AN=2184 GT:DS:GL:BD 0.37545788 0
1 227553496 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0750;AVGPOST=0.9997;RSQ=0.9983;ERATE=0.0002;THETA=0.0004;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 227553602 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7457;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227553875 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8664;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227553905 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.978;LDAF=0.0959;AVGPOST=0.9966;RSQ=0.9849;ERATE=0.0003;THETA=0.0004;AC=212;AN=2184 GT:DS:GL:BD 0.09706960 0
1 227553917 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.978;LDAF=0.0967;AVGPOST=0.9969;RSQ=0.9856;ERATE=0.0002;THETA=0.0008;AC=213;AN=2184 GT:DS:GL:BD 0.09752747 0
1 227554021 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227554024 . TCA T 204 PASS INDEL;BAVGPOST=0.997;BRSQ=0.900;LDAF=0.0094;AVGPOST=0.9958;RSQ=0.8549;ERATE=0.0003;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 227554025 . CAG C 1171 PASS INDEL;BAVGPOST=0.997;BRSQ=0.902;LDAF=0.0104;AVGPOST=0.9964;RSQ=0.8760;ERATE=0.0003;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 227554088 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227554158 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9741;ERATE=0.0002;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227554169 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0018;AVGPOST=0.9998;RSQ=0.9550;ERATE=0.0002;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227554171 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7992;AVGPOST=0.9994;RSQ=0.9984;ERATE=0.0003;THETA=0.0004;AC=1746;AN=2184 GT:DS:GL:BD 0.79945058 1
1 227554362 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227554389 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0351;AVGPOST=0.9996;RSQ=0.9960;ERATE=0.0003;THETA=0.0002;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 227554421 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0036;AVGPOST=0.9993;RSQ=0.9290;ERATE=0.0002;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227554477 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9692;ERATE=0.0002;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227554487 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9915;ERATE=0.0002;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 227554563 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8124;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227554639 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.9224;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227554704 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5541;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227554806 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7683;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227554834 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6706;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227554862 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0041;AVGPOST=0.9998;RSQ=0.9735;ERATE=0.0003;THETA=0.0012;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227554877 . A AC 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227554880 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.988;LDAF=0.1028;AVGPOST=0.9984;RSQ=0.9931;ERATE=0.0005;THETA=0.0002;AC=226;AN=2184 GT:DS:GL:BD 0.10347985 0
1 227554980 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0082;AVGPOST=0.9983;RSQ=0.9187;ERATE=0.0003;THETA=0.0010;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 227554983 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.7292;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227555038 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0091;AVGPOST=0.9988;RSQ=0.9491;ERATE=0.0003;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 227555099 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0052;AVGPOST=0.9989;RSQ=0.9066;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227555122 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8341;AVGPOST=0.9986;RSQ=0.9957;ERATE=0.0003;THETA=0.0002;AC=1823;AN=2184 GT:DS:GL:BD 0.83470696 1
1 227555133 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4930;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227555167 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7176;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227555236 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0075;AVGPOST=0.9995;RSQ=0.9661;ERATE=0.0002;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 227555304 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.960;LDAF=0.0118;AVGPOST=0.9979;RSQ=0.9430;ERATE=0.0003;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 227555331 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0074;AVGPOST=0.9998;RSQ=0.9853;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 227555355 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8078;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227555366 . T TG 22 PASS INDEL;BAVGPOST=0.999;BRSQ=0.583;LDAF=0.0033;AVGPOST=0.9964;RSQ=0.5386;ERATE=0.0010;THETA=0.0019;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227555472 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.633;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4239;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227555529 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0287;AVGPOST=0.9963;RSQ=0.9557;ERATE=0.0003;THETA=0.0003;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 227555611 . AG A 40 PASS INDEL;BAVGPOST=0.998;BRSQ=0.730;LDAF=0.0092;AVGPOST=0.9904;RSQ=0.5917;ERATE=0.0022;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227555669 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.913;LDAF=0.0366;AVGPOST=0.9987;RSQ=0.9832;ERATE=0.0003;THETA=0.0005;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 227555822 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0029;AVGPOST=0.9982;RSQ=0.7353;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227555827 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6800;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227555899 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.865;LDAF=0.0090;AVGPOST=0.9953;RSQ=0.8056;ERATE=0.0005;THETA=0.0007;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227555935 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9998;RSQ=0.9881;ERATE=0.0002;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 227556100 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9490;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227556193 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227556337 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0373;AVGPOST=0.9983;RSQ=0.9800;ERATE=0.0004;THETA=0.0010;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 227556490 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0039;AVGPOST=0.9978;RSQ=0.7908;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227556581 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.925;LDAF=0.7640;AVGPOST=0.9491;RSQ=0.8996;ERATE=0.0061;THETA=0.0005;AC=1692;AN=2184 GT:DS:GL:BD 0.77472526 1
1 227556727 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8541;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227556744 . GT G 6673 PASS INDEL;BAVGPOST=0.991;BRSQ=0.940;LDAF=0.0730;AVGPOST=0.9945;RSQ=0.9688;ERATE=0.0004;THETA=0.0004;AC=160;AN=2184 GT:DS:GL:BD 0.07326008 0
1 227556746 . TTA T 1556 PASS INDEL;BAVGPOST=0.987;BRSQ=0.907;LDAF=0.0718;AVGPOST=0.9949;RSQ=0.9709;ERATE=0.0004;THETA=0.0029;AC=157;AN=2184 GT:DS:GL:BD 0.07188645 0
1 227556908 . CT C 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4610;ERATE=0.0004;THETA=0.0043;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227556924 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7831;ERATE=0.0002;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227557044 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7190;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227557191 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.542;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7121;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227557442 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.888;LDAF=0.0088;AVGPOST=0.9970;RSQ=0.8665;ERATE=0.0004;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227557538 . C CA 139 PASS INDEL;BAVGPOST=1.000;BRSQ=0.704;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5372;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227557589 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.3815;AVGPOST=0.9971;RSQ=0.9947;ERATE=0.0004;THETA=0.0004;AC=832;AN=2184 GT:DS:GL:BD 0.38095239 0
1 227557617 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6704;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227557818 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7393;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227557899 . AT A 232 PASS INDEL;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0035;AVGPOST=0.9985;RSQ=0.8339;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227557981 rs72513623 TCA T 36960 PASS INDEL;BAVGPOST=0.993;BRSQ=0.991;LDAF=0.3749;AVGPOST=0.9877;RSQ=0.9792;ERATE=0.0022;THETA=0.0006;AC=817;AN=2184 GT:DS:GL:BD 0.37408423 0
1 227558029 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227558142 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0922;AVGPOST=0.9977;RSQ=0.9899;ERATE=0.0003;THETA=0.0006;AC=201;AN=2184 GT:DS:GL:BD 0.09203297 0
1 227558167 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8538;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227558193 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8531;ERATE=0.0002;THETA=0.0030;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227558203 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0162;AVGPOST=0.9993;RSQ=0.9796;ERATE=0.0003;THETA=0.0005;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 227558395 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6583;ERATE=0.0003;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227558414 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8482;ERATE=0.0003;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227558734 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0022;AVGPOST=0.9987;RSQ=0.8302;ERATE=0.0003;THETA=0.0062;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227558772 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227558805 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227558822 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1602;AVGPOST=0.9982;RSQ=0.9944;ERATE=0.0003;THETA=0.0004;AC=350;AN=2184 GT:DS:GL:BD 0.16025642 0
1 227558838 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6574;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227559000 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0002;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227559018 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0087;AVGPOST=0.9997;RSQ=0.9859;ERATE=0.0002;THETA=0.0030;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 227559063 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227559090 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0329;AVGPOST=0.9997;RSQ=0.9959;ERATE=0.0002;THETA=0.0003;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 227559120 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.940;BRSQ=0.862;LDAF=0.4756;AVGPOST=0.9153;RSQ=0.8402;ERATE=0.0622;THETA=0.0004;AC=1039;AN=2184 GT:DS:GL:BD 0.47573259 0
1 227559263 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8442;ERATE=0.0004;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227559374 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.7675;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227559518 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0134;AVGPOST=0.9997;RSQ=0.9904;ERATE=0.0003;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 227559522 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1152;AVGPOST=0.9968;RSQ=0.9887;ERATE=0.0003;THETA=0.0011;AC=250;AN=2184 GT:DS:GL:BD 0.11446887 0
1 227559594 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9267;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227559623 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0330;AVGPOST=0.9998;RSQ=0.9977;ERATE=0.0002;THETA=0.0002;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 227559696 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9895;ERATE=0.0002;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227559747 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6689;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227559865 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6091;ERATE=0.0002;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227559873 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0705;AVGPOST=0.9992;RSQ=0.9949;ERATE=0.0002;THETA=0.0002;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 227559922 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0031;AVGPOST=0.9988;RSQ=0.8624;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227560019 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.3870;AVGPOST=0.9976;RSQ=0.9958;ERATE=0.0005;THETA=0.0027;AC=845;AN=2184 GT:DS:GL:BD 0.38690478 0
1 227560066 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0080;AVGPOST=0.9989;RSQ=0.9391;ERATE=0.0002;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 227560086 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5559;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227560133 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.787;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9156;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227560275 rs11282521 T TATAGTC 174919 PASS INDEL;BAVGPOST=0.999;BRSQ=0.468;LDAF=0.9934;AVGPOST=0.9907;RSQ=0.4700;ERATE=0.0009;THETA=0.0007;AC=2175;AN=2184 GT:DS:GL:BD 0.99587911 1
1 227560310 rs35470631 G GTTC 12266 PASS INDEL;BAVGPOST=0.888;BRSQ=0.775;LDAF=0.4823;AVGPOST=0.8457;RSQ=0.7435;ERATE=0.0549;THETA=0.0002;AC=1085;AN=2184 GT:DS:GL:BD 0.49679488 0
1 227560314 . T TTCG 21247 PASS INDEL;BAVGPOST=0.935;BRSQ=0.872;LDAF=0.5430;AVGPOST=0.8986;RSQ=0.8351;ERATE=0.0406;THETA=0.0003;AC=1198;AN=2184 GT:DS:GL:BD 0.54853481 1
1 227560542 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227560599 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6162;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227560600 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3874;AVGPOST=0.9966;RSQ=0.9945;ERATE=0.0003;THETA=0.0003;AC=844;AN=2184 GT:DS:GL:BD 0.38644689 0
1 227560681 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5749;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227560722 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.880;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8893;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227560771 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.854;LDAF=0.0034;AVGPOST=0.9976;RSQ=0.7057;ERATE=0.0010;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227560794 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0283;AVGPOST=0.9984;RSQ=0.9795;ERATE=0.0003;THETA=0.0004;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 227560909 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0682;AVGPOST=0.9993;RSQ=0.9951;ERATE=0.0002;THETA=0.0003;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 227560936 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6437;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227561005 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6461;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227561092 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227561143 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6272;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227561180 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.982;LDAF=0.0396;AVGPOST=0.9994;RSQ=0.9937;ERATE=0.0003;THETA=0.0031;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 227561228 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0087;AVGPOST=0.9988;RSQ=0.9366;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 227561273 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1594;AVGPOST=0.9979;RSQ=0.9936;ERATE=0.0003;THETA=0.0004;AC=348;AN=2184 GT:DS:GL:BD 0.15934066 0
1 227561458 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4403;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227561590 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0036;AVGPOST=0.9989;RSQ=0.8643;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227561779 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0067;AVGPOST=0.9990;RSQ=0.9455;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 227561848 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9799;ERATE=0.0002;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227561899 . ATATGTACC A 771 PASS INDEL;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0036;AVGPOST=0.9971;RSQ=0.7046;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227561930 . T TGTA 43126 PASS INDEL;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.6144;AVGPOST=0.9761;RSQ=0.9635;ERATE=0.0037;THETA=0.0004;AC=1340;AN=2184 GT:DS:GL:BD 0.61355311 1
1 227562078 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0070;AVGPOST=0.9996;RSQ=0.9760;ERATE=0.0002;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 227562081 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0023;AVGPOST=0.9980;RSQ=0.6936;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227562195 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.986;LDAF=0.0947;AVGPOST=0.9898;RSQ=0.9532;ERATE=0.0005;THETA=0.0009;AC=204;AN=2184 GT:DS:GL:BD 0.09340660 0
1 227562242 . CT C 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.737;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4158;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227562329 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.992;LDAF=0.3855;AVGPOST=0.9904;RSQ=0.9849;ERATE=0.0012;THETA=0.0015;AC=842;AN=2184 GT:DS:GL:BD 0.38553113 0
1 227562378 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.1526;AVGPOST=0.9957;RSQ=0.9872;ERATE=0.0004;THETA=0.0002;AC=333;AN=2184 GT:DS:GL:BD 0.15247253 0
1 227562575 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.855;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9267;ERATE=0.0003;THETA=0.0016;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227562613 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.860;LDAF=0.0050;AVGPOST=0.9977;RSQ=0.8336;ERATE=0.0002;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227562692 . CTTCT C 184 PASS INDEL;BAVGPOST=0.999;BRSQ=0.806;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7455;ERATE=0.0004;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227562717 . C CTTTA 1616 PASS INDEL;BAVGPOST=0.993;BRSQ=0.862;LDAF=0.0290;AVGPOST=0.9880;RSQ=0.8431;ERATE=0.0016;THETA=0.0002;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 227562721 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.939;LDAF=0.0404;AVGPOST=0.9979;RSQ=0.9774;ERATE=0.0003;THETA=0.0007;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 227562746 . T TTC 598 PASS INDEL;BAVGPOST=0.995;BRSQ=0.842;LDAF=0.0194;AVGPOST=0.9902;RSQ=0.8186;ERATE=0.0004;THETA=0.0021;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 227562760 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227562773 . TC T 1076 PASS INDEL;BAVGPOST=0.993;BRSQ=0.931;LDAF=0.0388;AVGPOST=0.9973;RSQ=0.9698;ERATE=0.0008;THETA=0.0005;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 227562776 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.931;BRSQ=0.827;LDAF=0.4212;AVGPOST=0.9131;RSQ=0.8208;ERATE=0.0757;THETA=0.0003;AC=910;AN=2184 GT:DS:GL:BD 0.41666666 0
1 227562776 . C CTT 28214 PASS INDEL;BAVGPOST=0.986;BRSQ=0.971;LDAF=0.6017;AVGPOST=0.9649;RSQ=0.9449;ERATE=0.0065;THETA=0.0003;AC=1322;AN=2184 GT:DS:GL:BD 0.60531133 1
1 227562802 . TTTTTC T 307 PASS INDEL;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0044;AVGPOST=0.9977;RSQ=0.7943;ERATE=0.0004;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227562820 . TC T 811 PASS INDEL;BAVGPOST=0.992;BRSQ=0.884;LDAF=0.0328;AVGPOST=0.9968;RSQ=0.9670;ERATE=0.0005;THETA=0.0012;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 227563065 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0070;AVGPOST=0.9996;RSQ=0.9748;ERATE=0.0003;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 227563126 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1735;AVGPOST=0.9951;RSQ=0.9879;ERATE=0.0003;THETA=0.0035;AC=376;AN=2184 GT:DS:GL:BD 0.17216118 0
1 227563167 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6072;ERATE=0.0002;THETA=0.0060;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227563346 . AT A 10 PASS INDEL;BAVGPOST=0.999;BRSQ=0.524;LDAF=0.0018;AVGPOST=0.9979;RSQ=0.5280;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227563426 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0023;AVGPOST=0.9967;RSQ=0.4952;ERATE=0.0005;THETA=0.0044;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227563453 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.752;LDAF=0.0032;AVGPOST=0.9980;RSQ=0.7752;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227563464 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.688;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.7527;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227563478 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0061;AVGPOST=0.9992;RSQ=0.9426;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227563614 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0037;AVGPOST=0.9982;RSQ=0.8501;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227563680 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0553;AVGPOST=0.9994;RSQ=0.9944;ERATE=0.0003;THETA=0.0012;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 227563700 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0555;AVGPOST=0.9991;RSQ=0.9924;ERATE=0.0002;THETA=0.0012;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 227563873 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0054;AVGPOST=0.9993;RSQ=0.9486;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227563998 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0061;AVGPOST=0.9994;RSQ=0.9517;ERATE=0.0004;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227564006 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6228;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227564007 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0034;AVGPOST=0.9991;RSQ=0.8929;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227564149 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0070;AVGPOST=0.9997;RSQ=0.9780;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 227564176 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227564201 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5992;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227564339 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0071;AVGPOST=0.9995;RSQ=0.9679;ERATE=0.0002;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 227564428 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1465;AVGPOST=0.9992;RSQ=0.9975;ERATE=0.0002;THETA=0.0003;AC=320;AN=2184 GT:DS:GL:BD 0.14652015 0
1 227564472 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1464;AVGPOST=0.9990;RSQ=0.9969;ERATE=0.0003;THETA=0.0003;AC=320;AN=2184 GT:DS:GL:BD 0.14652015 0
1 227564503 . GT G 120 PASS INDEL;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227564515 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0553;AVGPOST=0.9999;RSQ=0.9988;ERATE=0.0003;THETA=0.0003;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 227564595 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.641;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4802;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227564633 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0088;AVGPOST=0.9981;RSQ=0.9191;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 227564634 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.534;LDAF=0.0042;AVGPOST=0.9973;RSQ=0.7254;ERATE=0.0005;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227564766 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0136;AVGPOST=0.9992;RSQ=0.9802;ERATE=0.0003;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 227564847 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1011;AVGPOST=0.9984;RSQ=0.9929;ERATE=0.0003;THETA=0.0002;AC=220;AN=2184 GT:DS:GL:BD 0.10073260 0
1 227564978 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.6024;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227565053 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6751;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227565121 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6791;ERATE=0.0003;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227565122 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.749;LDAF=0.0018;AVGPOST=0.9977;RSQ=0.4937;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227565170 rs112123925 A AT 5718 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0560;AVGPOST=0.9991;RSQ=0.9920;ERATE=0.0004;THETA=0.0003;AC=122;AN=2184 GT:DS:GL:BD 0.05586081 0
1 227565229 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227565314 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.980;LDAF=0.1416;AVGPOST=0.9984;RSQ=0.9952;ERATE=0.0003;THETA=0.0004;AC=310;AN=2184 GT:DS:GL:BD 0.14194140 0
1 227565328 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7748;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227565468 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5869;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227565663 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8155;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227565667 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3859;AVGPOST=0.9971;RSQ=0.9947;ERATE=0.0006;THETA=0.0006;AC=842;AN=2184 GT:DS:GL:BD 0.38553113 0
1 227565675 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7740;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227565722 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6707;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227565841 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6075;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227565896 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.907;BRSQ=0.737;LDAF=0.5751;AVGPOST=0.8741;RSQ=0.7038;ERATE=0.0899;THETA=0.0003;AC=1269;AN=2184 GT:DS:GL:BD 0.58104396 1
1 227565900 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.812;LDAF=0.0045;AVGPOST=0.9986;RSQ=0.8594;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227566057 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=0.9999;RSQ=0.9921;ERATE=0.0002;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227566134 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1467;AVGPOST=0.9991;RSQ=0.9968;ERATE=0.0004;THETA=0.0002;AC=321;AN=2184 GT:DS:GL:BD 0.14697802 0
1 227566222 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0128;AVGPOST=0.9999;RSQ=0.9948;ERATE=0.0002;THETA=0.0012;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 227566403 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.761;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.6359;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227566414 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0128;AVGPOST=0.9995;RSQ=0.9852;ERATE=0.0002;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 227566514 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6580;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227566617 rs78025089 G GA 97634 PASS INDEL;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8336;AVGPOST=0.9926;RSQ=0.9818;ERATE=0.0007;THETA=0.0003;AC=1822;AN=2184 GT:DS:GL:BD 0.83424908 1
1 227566678 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7396;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227566707 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0024;AVGPOST=0.9995;RSQ=0.9111;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227566772 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9999;RSQ=0.9881;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227566814 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0015;AVGPOST=0.9993;RSQ=0.7884;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227566902 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7393;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227566911 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227566950 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0335;AVGPOST=0.9996;RSQ=0.9953;ERATE=0.0003;THETA=0.0001;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 227566964 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0022;AVGPOST=0.9977;RSQ=0.6505;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227566965 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7647;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227566987 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0055;AVGPOST=1.0000;RSQ=0.9960;ERATE=0.0002;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227567013 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0128;AVGPOST=0.9996;RSQ=0.9873;ERATE=0.0003;THETA=0.0009;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 227567032 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227567085 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.780;LDAF=0.0027;AVGPOST=0.9984;RSQ=0.7582;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227567143 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0046;AVGPOST=0.9961;RSQ=0.6726;ERATE=0.0008;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227567144 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0248;AVGPOST=0.9986;RSQ=0.9771;ERATE=0.0003;THETA=0.0006;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 227567197 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0026;AVGPOST=0.9989;RSQ=0.8855;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227567209 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0560;AVGPOST=0.9990;RSQ=0.9916;ERATE=0.0005;THETA=0.0002;AC=122;AN=2184 GT:DS:GL:BD 0.05586081 0
1 227567248 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8020;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227567353 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0346;AVGPOST=0.9979;RSQ=0.9825;ERATE=0.0003;THETA=0.0004;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 227567386 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7230;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227567566 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9764;ERATE=0.0002;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227567630 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7186;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227567634 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0067;AVGPOST=0.9989;RSQ=0.9297;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 227567903 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2145;AVGPOST=0.9985;RSQ=0.9960;ERATE=0.0003;THETA=0.0004;AC=469;AN=2184 GT:DS:GL:BD 0.21474358 0
1 227568006 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0335;AVGPOST=0.9996;RSQ=0.9953;ERATE=0.0003;THETA=0.0015;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 227568139 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0081;AVGPOST=0.9985;RSQ=0.9284;ERATE=0.0002;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227568156 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7847;ERATE=0.0003;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227568217 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0155;AVGPOST=0.9984;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 227568238 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0572;AVGPOST=0.9981;RSQ=0.9853;ERATE=0.0006;THETA=0.0004;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 227568318 . C CT 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5963;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227568385 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.837;LDAF=0.0061;AVGPOST=0.9979;RSQ=0.8580;ERATE=0.0004;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227568523 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6025;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227568607 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.812;LDAF=0.0189;AVGPOST=0.9951;RSQ=0.8959;ERATE=0.0005;THETA=0.0004;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 227568783 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.981;LDAF=0.0892;AVGPOST=0.9969;RSQ=0.9851;ERATE=0.0004;THETA=0.0005;AC=195;AN=2184 GT:DS:GL:BD 0.08928572 0
1 227568960 rs74787577 CA C 8886 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0837;AVGPOST=0.9979;RSQ=0.9889;ERATE=0.0003;THETA=0.0004;AC=183;AN=2184 GT:DS:GL:BD 0.08379121 0
1 227569021 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.959;LDAF=0.1488;AVGPOST=0.9946;RSQ=0.9827;ERATE=0.0005;THETA=0.0004;AC=328;AN=2184 GT:DS:GL:BD 0.15018316 0
1 227569095 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0037;AVGPOST=0.9987;RSQ=0.8378;ERATE=0.0005;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227569107 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0551;AVGPOST=0.9989;RSQ=0.9903;ERATE=0.0005;THETA=0.0006;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 227569196 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.841;LDAF=0.0149;AVGPOST=0.9909;RSQ=0.7480;ERATE=0.0008;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 227569446 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0017;AVGPOST=0.9988;RSQ=0.7953;ERATE=0.0002;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227569460 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0542;AVGPOST=0.9993;RSQ=0.9938;ERATE=0.0003;THETA=0.0008;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 227569583 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.5306;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227569672 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.758;LDAF=0.0038;AVGPOST=0.9977;RSQ=0.7697;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227569838 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0544;AVGPOST=0.9991;RSQ=0.9930;ERATE=0.0003;THETA=0.0006;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 227569867 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.6489;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227570005 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.1011;AVGPOST=0.9980;RSQ=0.9910;ERATE=0.0003;THETA=0.0003;AC=221;AN=2184 GT:DS:GL:BD 0.10119048 0
1 227570043 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6590;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227570086 . C CAT 241 PASS INDEL;BAVGPOST=0.978;BRSQ=0.586;LDAF=0.0544;AVGPOST=0.9416;RSQ=0.5599;ERATE=0.0061;THETA=0.0003;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 227570223 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0057;AVGPOST=0.9976;RSQ=0.8531;ERATE=0.0002;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227570225 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9998;RSQ=0.9841;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 227570237 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6194;ERATE=0.0003;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227570320 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.755;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6665;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227570428 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0061;AVGPOST=0.9985;RSQ=0.8907;ERATE=0.0002;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227570516 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227570810 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.869;LDAF=0.0090;AVGPOST=0.9986;RSQ=0.9311;ERATE=0.0003;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 227570840 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.779;LDAF=0.0090;AVGPOST=0.9981;RSQ=0.8992;ERATE=0.0006;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 227570900 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.604;LDAF=0.0065;AVGPOST=0.9927;RSQ=0.5599;ERATE=0.0009;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227570967 . A ACC 71 PASS INDEL;BAVGPOST=0.966;BRSQ=0.286;LDAF=0.0540;AVGPOST=0.9288;RSQ=0.4768;ERATE=0.0053;THETA=0.0004;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 227571113 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0461;AVGPOST=0.9982;RSQ=0.9863;ERATE=0.0003;THETA=0.0006;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 227571152 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.964;LDAF=0.0191;AVGPOST=0.9969;RSQ=0.9372;ERATE=0.0003;THETA=0.0003;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 227571416 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0081;AVGPOST=0.9975;RSQ=0.8616;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 227571428 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.685;LDAF=0.0055;AVGPOST=0.9957;RSQ=0.6757;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227571432 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.732;LDAF=0.0018;AVGPOST=0.9975;RSQ=0.4442;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227571502 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0120;AVGPOST=0.9954;RSQ=0.8514;ERATE=0.0006;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 227571554 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0032;AVGPOST=0.9989;RSQ=0.8533;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227571619 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0843;AVGPOST=0.9973;RSQ=0.9854;ERATE=0.0006;THETA=0.0002;AC=184;AN=2184 GT:DS:GL:BD 0.08424909 0
1 227571731 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5587;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227571745 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.759;LDAF=0.0037;AVGPOST=0.9972;RSQ=0.6990;ERATE=0.0008;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227571817 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6578;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227571860 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.719;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6632;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227571868 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.669;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6889;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227571976 . GA G 58 PASS INDEL;BAVGPOST=0.982;BRSQ=0.505;LDAF=0.0327;AVGPOST=0.9608;RSQ=0.5335;ERATE=0.0109;THETA=0.0005;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 227571977 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.903;LDAF=0.0122;AVGPOST=0.9963;RSQ=0.8753;ERATE=0.0003;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 227572024 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0335;AVGPOST=0.9998;RSQ=0.9970;ERATE=0.0003;THETA=0.0004;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 227572025 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0028;AVGPOST=0.9993;RSQ=0.9064;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227572042 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.899;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.8995;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227572073 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.3860;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227572123 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0877;AVGPOST=0.9996;RSQ=0.9979;ERATE=0.0003;THETA=0.0010;AC=192;AN=2184 GT:DS:GL:BD 0.08791209 0
1 227572321 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0818;AVGPOST=0.9981;RSQ=0.9901;ERATE=0.0005;THETA=0.0005;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 227572370 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0546;AVGPOST=0.9985;RSQ=0.9870;ERATE=0.0005;THETA=0.0003;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 227572379 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.914;LDAF=0.0745;AVGPOST=0.9718;RSQ=0.8451;ERATE=0.0088;THETA=0.0005;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 227572389 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0070;AVGPOST=0.9998;RSQ=0.9842;ERATE=0.0002;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 227572437 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0123;AVGPOST=0.9992;RSQ=0.9732;ERATE=0.0003;THETA=0.0014;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 227572485 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8913;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227572556 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3872;AVGPOST=0.9962;RSQ=0.9936;ERATE=0.0004;THETA=0.0028;AC=843;AN=2184 GT:DS:GL:BD 0.38598901 0
1 227572630 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.782;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6112;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227572674 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.5245;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227572746 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.971;LDAF=0.2321;AVGPOST=0.9847;RSQ=0.9642;ERATE=0.0004;THETA=0.0004;AC=510;AN=2184 GT:DS:GL:BD 0.23351648 0
1 227572756 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0065;AVGPOST=0.9977;RSQ=0.8555;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227572862 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0119;AVGPOST=0.9951;RSQ=0.8349;ERATE=0.0006;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 227572973 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0340;AVGPOST=0.9987;RSQ=0.9838;ERATE=0.0005;THETA=0.0008;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 227573073 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9517;ERATE=0.0002;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227573085 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.760;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6043;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227573124 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.527;LDAF=0.0025;AVGPOST=0.9989;RSQ=0.7902;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227573205 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.632;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5207;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227573406 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227573460 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0253;AVGPOST=0.9987;RSQ=0.9802;ERATE=0.0004;THETA=0.0002;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 227573468 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0019;AVGPOST=0.9996;RSQ=0.9179;ERATE=0.0002;THETA=0.0016;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227573505 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0544;AVGPOST=1.0000;RSQ=0.9996;ERATE=0.0002;THETA=0.0006;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 227573538 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=0.9994;RSQ=0.9695;ERATE=0.0002;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227573659 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227573747 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0070;AVGPOST=0.9995;RSQ=0.9689;ERATE=0.0004;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 227573781 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0025;AVGPOST=0.9988;RSQ=0.8221;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227573821 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0547;AVGPOST=0.9993;RSQ=0.9939;ERATE=0.0003;THETA=0.0004;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 227574246 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.610;LDAF=0.0119;AVGPOST=0.9909;RSQ=0.7066;ERATE=0.0004;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 227574381 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6662;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227574431 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0039;AVGPOST=0.9987;RSQ=0.8685;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227574489 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.836;LDAF=0.0049;AVGPOST=0.9979;RSQ=0.8357;ERATE=0.0004;THETA=0.0038;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227574508 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9059;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227574525 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1528;AVGPOST=0.9984;RSQ=0.9945;ERATE=0.0003;THETA=0.0015;AC=334;AN=2184 GT:DS:GL:BD 0.15293041 0
1 227574716 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0062;AVGPOST=0.9992;RSQ=0.9453;ERATE=0.0003;THETA=0.0001;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227574765 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0544;AVGPOST=0.9999;RSQ=0.9992;ERATE=0.0002;THETA=0.0003;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 227574896 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7163;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227574966 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0863;AVGPOST=0.9991;RSQ=0.9951;ERATE=0.0003;THETA=0.0015;AC=189;AN=2184 GT:DS:GL:BD 0.08653846 0
1 227575014 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.976;LDAF=0.0594;AVGPOST=0.9987;RSQ=0.9913;ERATE=0.0003;THETA=0.0007;AC=129;AN=2184 GT:DS:GL:BD 0.05906593 0
1 227575024 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0545;AVGPOST=0.9997;RSQ=0.9971;ERATE=0.0003;THETA=0.0005;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 227575051 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2192;AVGPOST=0.9986;RSQ=0.9965;ERATE=0.0003;THETA=0.0003;AC=480;AN=2184 GT:DS:GL:BD 0.21978022 0
1 227575078 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6161;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227575223 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0036;AVGPOST=0.9988;RSQ=0.8920;ERATE=0.0002;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227575290 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.910;LDAF=0.0103;AVGPOST=0.9994;RSQ=0.9723;ERATE=0.0003;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 227575455 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5112;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227575539 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0202;AVGPOST=0.9980;RSQ=0.9623;ERATE=0.0004;THETA=0.0007;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 227575599 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0058;AVGPOST=0.9987;RSQ=0.9160;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227575629 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0879;AVGPOST=0.9995;RSQ=0.9970;ERATE=0.0003;THETA=0.0003;AC=192;AN=2184 GT:DS:GL:BD 0.08791209 0
1 227575638 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.827;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7206;ERATE=0.0003;THETA=0.0032;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227575736 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.958;LDAF=0.1521;AVGPOST=0.9931;RSQ=0.9802;ERATE=0.0005;THETA=0.0005;AC=331;AN=2184 GT:DS:GL:BD 0.15155677 0
1 227575882 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5247;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227575987 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.903;LDAF=0.0357;AVGPOST=0.9916;RSQ=0.9095;ERATE=0.0005;THETA=0.0008;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 227575988 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0037;AVGPOST=0.9990;RSQ=0.8877;ERATE=0.0002;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227576029 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5127;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227576053 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6952;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227576152 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0847;AVGPOST=0.9977;RSQ=0.9895;ERATE=0.0006;THETA=0.0007;AC=184;AN=2184 GT:DS:GL:BD 0.08424909 0
1 227576154 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4793;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227576172 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4728;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227576182 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0119;AVGPOST=0.9989;RSQ=0.9678;ERATE=0.0003;THETA=0.0045;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227576220 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2524;AVGPOST=0.9993;RSQ=0.9983;ERATE=0.0003;THETA=0.0001;AC=552;AN=2184 GT:DS:GL:BD 0.25274727 0
1 227576221 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9381;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227576257 . TA T 21 PASS INDEL;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.6316;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227576354 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1032;AVGPOST=0.9992;RSQ=0.9960;ERATE=0.0004;THETA=0.0005;AC=226;AN=2184 GT:DS:GL:BD 0.10347985 0
1 227576532 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9734;ERATE=0.0002;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227576664 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.982;LDAF=0.1019;AVGPOST=0.9968;RSQ=0.9878;ERATE=0.0003;THETA=0.0005;AC=224;AN=2184 GT:DS:GL:BD 0.10256410 0
1 227576715 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6133;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227576845 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227576903 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.971;LDAF=0.0519;AVGPOST=0.9985;RSQ=0.9874;ERATE=0.0003;THETA=0.0008;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 227576969 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.8154;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227577121 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0045;AVGPOST=0.9988;RSQ=0.8892;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227577202 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5688;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227577280 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.3930;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227577284 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9792;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227577397 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1541;AVGPOST=0.9974;RSQ=0.9930;ERATE=0.0003;THETA=0.0005;AC=337;AN=2184 GT:DS:GL:BD 0.15430403 0
1 227577416 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.645;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7883;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227577419 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.791;LDAF=0.0192;AVGPOST=0.9941;RSQ=0.8706;ERATE=0.0003;THETA=0.0004;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 227577423 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0057;AVGPOST=0.9993;RSQ=0.9398;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227577445 . TG T 2908 PASS INDEL;BAVGPOST=0.953;BRSQ=0.203;LDAF=0.9138;AVGPOST=0.8730;RSQ=0.3831;ERATE=0.0086;THETA=0.0003;AC=2066;AN=2184 GT:DS:GL:BD 0.94597071 1
1 227577520 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0407;AVGPOST=0.9963;RSQ=0.9644;ERATE=0.0005;THETA=0.0002;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 227577594 . AT A 304 PASS INDEL;BAVGPOST=0.997;BRSQ=0.651;LDAF=0.0068;AVGPOST=0.9922;RSQ=0.6082;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227577660 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0002;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227577717 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0572;AVGPOST=0.9990;RSQ=0.9925;ERATE=0.0002;THETA=0.0007;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 227577719 . A AT 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.718;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5624;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227577736 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0077;AVGPOST=0.9991;RSQ=0.9520;ERATE=0.0003;THETA=0.0014;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227577796 rs35111574 AG A 108 PASS INDEL;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227577876 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0032;AVGPOST=0.9997;RSQ=0.9642;ERATE=0.0002;THETA=0.0023;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227577896 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227577913 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7819;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227577981 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9482;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227578027 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227578057 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9213;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227578105 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.648;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5914;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227578235 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0578;AVGPOST=0.9988;RSQ=0.9920;ERATE=0.0002;THETA=0.0002;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 227578302 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0573;AVGPOST=0.9987;RSQ=0.9901;ERATE=0.0004;THETA=0.0004;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 227578339 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0004;AVGPOST=0.9992;RSQ=0.1552;ERATE=0.0003;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 227578412 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0037;AVGPOST=0.9991;RSQ=0.8974;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227578484 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0002;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227578607 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5407;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227578621 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227578726 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0007;AVGPOST=0.9991;RSQ=0.4665;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227578790 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.971;LDAF=0.0467;AVGPOST=0.9976;RSQ=0.9788;ERATE=0.0003;THETA=0.0006;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 227578813 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7414;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227578819 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.960;LDAF=0.0571;AVGPOST=0.9980;RSQ=0.9849;ERATE=0.0003;THETA=0.0010;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 227578822 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.973;LDAF=0.0573;AVGPOST=0.9982;RSQ=0.9853;ERATE=0.0003;THETA=0.0006;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 227578867 . AAAAT A 1798 PASS INDEL;BAVGPOST=0.973;BRSQ=0.769;LDAF=0.0784;AVGPOST=0.9435;RSQ=0.7089;ERATE=0.0105;THETA=0.0004;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 227578892 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.792;LDAF=0.0069;AVGPOST=0.9996;RSQ=0.9747;ERATE=0.0002;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 227578899 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0009;AVGPOST=0.9988;RSQ=0.4164;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227578908 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.8403;AVGPOST=0.9964;RSQ=0.9903;ERATE=0.0007;THETA=0.0003;AC=1837;AN=2184 GT:DS:GL:BD 0.84111720 1
1 227578923 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6878;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227578985 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3900;AVGPOST=0.9981;RSQ=0.9965;ERATE=0.0004;THETA=0.0005;AC=850;AN=2184 GT:DS:GL:BD 0.38919413 0
1 227579137 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0088;AVGPOST=0.9992;RSQ=0.9629;ERATE=0.0003;THETA=0.0008;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 227579344 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1650;AVGPOST=0.9973;RSQ=0.9925;ERATE=0.0004;THETA=0.0003;AC=359;AN=2184 GT:DS:GL:BD 0.16437729 0
1 227579428 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0462;AVGPOST=0.9999;RSQ=0.9990;ERATE=0.0002;THETA=0.0004;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 227579531 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6552;ERATE=0.0002;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227579602 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0074;AVGPOST=0.9996;RSQ=0.9767;ERATE=0.0002;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 227579747 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.689;LDAF=0.0017;AVGPOST=0.9981;RSQ=0.5876;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227579935 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227580007 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8199;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227580162 rs80154082 AG A 14118 PASS INDEL;BAVGPOST=0.994;BRSQ=0.983;LDAF=0.1523;AVGPOST=0.9905;RSQ=0.9730;ERATE=0.0004;THETA=0.0003;AC=333;AN=2184 GT:DS:GL:BD 0.15247253 0
1 227580413 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0113;AVGPOST=0.9978;RSQ=0.9199;ERATE=0.0003;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 227580567 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.641;LDAF=0.0093;AVGPOST=0.9943;RSQ=0.7712;ERATE=0.0003;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 227580653 rs80016548 G GC 12897 PASS INDEL;BAVGPOST=0.963;BRSQ=0.929;LDAF=0.5193;AVGPOST=0.9016;RSQ=0.8497;ERATE=0.0101;THETA=0.0003;AC=1153;AN=2184 GT:DS:GL:BD 0.52793038 1
1 227580660 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.1546;AVGPOST=0.9945;RSQ=0.9824;ERATE=0.0008;THETA=0.0003;AC=337;AN=2184 GT:DS:GL:BD 0.15430403 0
1 227580772 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0033;AVGPOST=0.9988;RSQ=0.8428;ERATE=0.0005;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227580849 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.948;BRSQ=0.612;LDAF=0.0724;AVGPOST=0.9622;RSQ=0.8008;ERATE=0.0009;THETA=0.0031;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 227580867 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0015;AVGPOST=0.9978;RSQ=0.3511;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227580876 . A ATAAG 2586 PASS INDEL;BAVGPOST=0.902;BRSQ=0.525;LDAF=0.1646;AVGPOST=0.8475;RSQ=0.5533;ERATE=0.0346;THETA=0.0002;AC=259;AN=2184 GT:DS:GL:BD 0.11858974 0
1 227580880 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.581;LDAF=0.0120;AVGPOST=0.9878;RSQ=0.6041;ERATE=0.0015;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 227580944 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9670;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227581004 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0036;AVGPOST=0.9991;RSQ=0.8913;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227581017 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6592;AVGPOST=0.9973;RSQ=0.9949;ERATE=0.0004;THETA=0.0002;AC=1440;AN=2184 GT:DS:GL:BD 0.65934068 1
1 227581093 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0130;AVGPOST=0.9989;RSQ=0.9733;ERATE=0.0003;THETA=0.0002;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 227581211 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.4090;AVGPOST=0.9911;RSQ=0.9862;ERATE=0.0033;THETA=0.0004;AC=888;AN=2184 GT:DS:GL:BD 0.40659341 0
1 227581212 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.4112;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227581227 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.871;LDAF=0.0038;AVGPOST=0.9989;RSQ=0.8875;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227581297 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0089;AVGPOST=0.9987;RSQ=0.9568;ERATE=0.0002;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 227581308 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0910;AVGPOST=0.9986;RSQ=0.9940;ERATE=0.0002;THETA=0.0026;AC=199;AN=2184 GT:DS:GL:BD 0.09111722 0
1 227581428 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8622;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227581460 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.519;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7900;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227581484 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0008;AVGPOST=0.9998;RSQ=0.8876;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227581520 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0376;AVGPOST=0.9996;RSQ=0.9949;ERATE=0.0003;THETA=0.0003;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 227581580 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.3849;AVGPOST=0.9970;RSQ=0.9955;ERATE=0.0007;THETA=0.0002;AC=839;AN=2184 GT:DS:GL:BD 0.38415751 0
1 227581731 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227581807 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1559;AVGPOST=0.9963;RSQ=0.9885;ERATE=0.0006;THETA=0.0027;AC=341;AN=2184 GT:DS:GL:BD 0.15613553 0
1 227581862 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0025;AVGPOST=0.9980;RSQ=0.6930;ERATE=0.0003;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227581912 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.954;BRSQ=0.876;LDAF=0.8045;AVGPOST=0.9505;RSQ=0.8869;ERATE=0.0048;THETA=0.0001;AC=1785;AN=2184 GT:DS:GL:BD 0.81730771 1
1 227582170 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.819;LDAF=0.0189;AVGPOST=0.9887;RSQ=0.7850;ERATE=0.0007;THETA=0.0006;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 227582187 . T TACAA 6271 PASS INDEL;BAVGPOST=0.725;BRSQ=0.596;LDAF=0.4830;AVGPOST=0.7643;RSQ=0.6841;ERATE=0.0355;THETA=0.0002;AC=1116;AN=2184 GT:DS:GL:BD 0.51098901 1
1 227582200 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0151;AVGPOST=0.9889;RSQ=0.7128;ERATE=0.0009;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 227582228 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4576;ERATE=0.0004;THETA=0.0044;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227582238 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0170;AVGPOST=0.9987;RSQ=0.9628;ERATE=0.0004;THETA=0.0005;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 227582247 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.981;LDAF=0.1566;AVGPOST=0.9973;RSQ=0.9927;ERATE=0.0003;THETA=0.0002;AC=341;AN=2184 GT:DS:GL:BD 0.15613553 0
1 227582265 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.6089;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227582334 . G GA 103 PASS INDEL;BAVGPOST=0.983;BRSQ=0.513;LDAF=0.0351;AVGPOST=0.9557;RSQ=0.4833;ERATE=0.0099;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 227582375 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1300;AVGPOST=0.9988;RSQ=0.9957;ERATE=0.0003;THETA=0.0004;AC=285;AN=2184 GT:DS:GL:BD 0.13049451 0
1 227582522 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0076;AVGPOST=0.9982;RSQ=0.9110;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 227582562 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8488;AVGPOST=0.9979;RSQ=0.9935;ERATE=0.0005;THETA=0.0027;AC=1856;AN=2184 GT:DS:GL:BD 0.84981686 1
1 227582663 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0049;AVGPOST=0.9991;RSQ=0.9196;ERATE=0.0002;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227582664 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0231;AVGPOST=0.9980;RSQ=0.9682;ERATE=0.0006;THETA=0.0002;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 227582764 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0045;AVGPOST=0.9993;RSQ=0.9278;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227582765 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.787;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8463;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227582784 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4047;AVGPOST=0.9985;RSQ=0.9976;ERATE=0.0005;THETA=0.0003;AC=883;AN=2184 GT:DS:GL:BD 0.40430403 0
1 227582873 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.982;LDAF=0.8463;AVGPOST=0.9915;RSQ=0.9742;ERATE=0.0015;THETA=0.0005;AC=1855;AN=2184 GT:DS:GL:BD 0.84935898 1
1 227582881 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1436;AVGPOST=0.9968;RSQ=0.9900;ERATE=0.0006;THETA=0.0003;AC=312;AN=2184 GT:DS:GL:BD 0.14285715 0
1 227582974 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0031;AVGPOST=0.9991;RSQ=0.8770;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227583033 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1773;AVGPOST=0.9984;RSQ=0.9954;ERATE=0.0004;THETA=0.0002;AC=388;AN=2184 GT:DS:GL:BD 0.17765568 0
1 227583058 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.956;BRSQ=0.924;LDAF=0.3691;AVGPOST=0.9577;RSQ=0.9284;ERATE=0.0075;THETA=0.0002;AC=807;AN=2184 GT:DS:GL:BD 0.36950549 0
1 227583172 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0024;AVGPOST=0.9981;RSQ=0.6739;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227583278 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7880;ERATE=0.0003;THETA=0.0024;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227583331 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0029;AVGPOST=0.9993;RSQ=0.8904;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227583440 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.4049;AVGPOST=0.9984;RSQ=0.9975;ERATE=0.0005;THETA=0.0005;AC=884;AN=2184 GT:DS:GL:BD 0.40476191 0
1 227583551 rs58504691 A AAAAC 54413 PASS INDEL;BAVGPOST=0.973;BRSQ=0.949;LDAF=0.3954;AVGPOST=0.9791;RSQ=0.9680;ERATE=0.0032;THETA=0.0004;AC=867;AN=2184 GT:DS:GL:BD 0.39697802 0
1 227583595 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7941;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227583597 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.8515;AVGPOST=0.9989;RSQ=0.9968;ERATE=0.0004;THETA=0.0002;AC=1860;AN=2184 GT:DS:GL:BD 0.85164833 1
1 227583645 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9662;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227583685 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7464;ERATE=0.0002;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227583709 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7348;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227583778 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.766;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7442;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227583800 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4047;AVGPOST=0.9984;RSQ=0.9971;ERATE=0.0004;THETA=0.0003;AC=883;AN=2184 GT:DS:GL:BD 0.40430403 0
1 227583963 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9582;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227584014 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.8462;AVGPOST=0.9921;RSQ=0.9766;ERATE=0.0015;THETA=0.0008;AC=1851;AN=2184 GT:DS:GL:BD 0.84752744 1
1 227584034 rs60186972 CAG C 26434 PASS INDEL;BAVGPOST=0.957;BRSQ=0.925;LDAF=0.3710;AVGPOST=0.9620;RSQ=0.9384;ERATE=0.0064;THETA=0.0002;AC=820;AN=2184 GT:DS:GL:BD 0.37545788 0
1 227584100 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.920;LDAF=0.0097;AVGPOST=0.9977;RSQ=0.8979;ERATE=0.0003;THETA=0.0021;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 227584212 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.862;LDAF=0.0059;AVGPOST=0.9976;RSQ=0.8595;ERATE=0.0003;THETA=0.0020;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227584223 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7177;ERATE=0.0004;THETA=0.0064;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227584307 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5754;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227584413 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8702;ERATE=0.0003;THETA=0.0036;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227584425 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0101;AVGPOST=0.9999;RSQ=0.9940;ERATE=0.0002;THETA=0.0010;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 227584455 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0052;AVGPOST=0.9997;RSQ=0.9704;ERATE=0.0003;THETA=0.0063;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227584582 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0128;AVGPOST=0.9984;RSQ=0.9481;ERATE=0.0003;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 227584601 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.546;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227584651 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.979;LDAF=0.4248;AVGPOST=0.9761;RSQ=0.9646;ERATE=0.0108;THETA=0.0005;AC=921;AN=2184 GT:DS:GL:BD 0.42170331 0
1 227584832 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.987;LDAF=0.8428;AVGPOST=0.9883;RSQ=0.9685;ERATE=0.0027;THETA=0.0006;AC=1846;AN=2184 GT:DS:GL:BD 0.84523809 1
1 227584903 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0027;AVGPOST=0.9973;RSQ=0.6031;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227585104 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0087;AVGPOST=0.9999;RSQ=0.9924;ERATE=0.0002;THETA=0.0040;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 227585137 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6772;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227585157 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.6078;ERATE=0.0003;THETA=0.0083;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227585174 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7529;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227585210 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227585357 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.896;LDAF=0.0036;AVGPOST=0.9984;RSQ=0.8354;ERATE=0.0002;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227585493 rs35544301 AT A 1255 PASS INDEL;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0088;AVGPOST=0.9982;RSQ=0.9162;ERATE=0.0002;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 227585519 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0357;AVGPOST=0.9992;RSQ=0.9909;ERATE=0.0003;THETA=0.0012;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 227585527 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9635;ERATE=0.0002;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227585546 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0002;THETA=0.0014;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227585570 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9229;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227585661 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2853;AVGPOST=0.9960;RSQ=0.9926;ERATE=0.0004;THETA=0.0018;AC=625;AN=2184 GT:DS:GL:BD 0.28617215 0
1 227585683 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6781;ERATE=0.0003;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227585699 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0111;AVGPOST=0.9995;RSQ=0.9805;ERATE=0.0003;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 227585736 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5268;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227585829 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.866;LDAF=0.0069;AVGPOST=0.9978;RSQ=0.8543;ERATE=0.0003;THETA=0.0001;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227585925 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8495;AVGPOST=0.9994;RSQ=0.9980;ERATE=0.0003;THETA=0.0011;AC=1856;AN=2184 GT:DS:GL:BD 0.84981686 1
1 227585983 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1331;AVGPOST=0.9989;RSQ=0.9964;ERATE=0.0003;THETA=0.0006;AC=291;AN=2184 GT:DS:GL:BD 0.13324176 0
1 227586014 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0066;AVGPOST=0.9988;RSQ=0.9211;ERATE=0.0002;THETA=0.0010;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 227586227 . AG A 443 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.8883;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227586401 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.5611;AVGPOST=0.9963;RSQ=0.9945;ERATE=0.0004;THETA=0.0002;AC=1225;AN=2184 GT:DS:GL:BD 0.56089741 1
1 227586491 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0093;AVGPOST=0.9976;RSQ=0.8916;ERATE=0.0003;THETA=0.0001;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 227586498 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.967;BRSQ=0.912;LDAF=0.8214;AVGPOST=0.9812;RSQ=0.9557;ERATE=0.0006;THETA=0.0003;AC=1803;AN=2184 GT:DS:GL:BD 0.82554942 1
1 227586525 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.751;LDAF=0.0021;AVGPOST=0.9991;RSQ=0.8319;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227586685 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8434;AVGPOST=0.9933;RSQ=0.9804;ERATE=0.0008;THETA=0.0012;AC=1845;AN=2184 GT:DS:GL:BD 0.84478021 1
1 227586835 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227586844 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8468;AVGPOST=0.9984;RSQ=0.9960;ERATE=0.0003;THETA=0.0002;AC=1849;AN=2184 GT:DS:GL:BD 0.84661174 1
1 227586880 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.907;LDAF=0.0095;AVGPOST=0.9988;RSQ=0.9424;ERATE=0.0006;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 227586906 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0020;AVGPOST=0.9991;RSQ=0.8575;ERATE=0.0003;THETA=0.0040;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227586936 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0110;AVGPOST=0.9998;RSQ=0.9901;ERATE=0.0002;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 227587047 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1343;AVGPOST=0.9990;RSQ=0.9969;ERATE=0.0003;THETA=0.0003;AC=294;AN=2184 GT:DS:GL:BD 0.13461539 0
1 227587066 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5800;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227587070 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227587072 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0047;AVGPOST=0.9996;RSQ=0.9583;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227587073 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5273;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227587082 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.2864;AVGPOST=0.9973;RSQ=0.9951;ERATE=0.0003;THETA=0.0008;AC=626;AN=2184 GT:DS:GL:BD 0.28663003 0
1 227587086 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0109;AVGPOST=1.0000;RSQ=0.9981;ERATE=0.0002;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 227587112 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8893;ERATE=0.0003;THETA=0.0068;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227587290 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9865;ERATE=0.0002;THETA=0.0012;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227587401 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227587407 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.985;LDAF=0.8344;AVGPOST=0.9979;RSQ=0.9938;ERATE=0.0003;THETA=0.0003;AC=1823;AN=2184 GT:DS:GL:BD 0.83470696 1
1 227587467 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7052;ERATE=0.0003;THETA=0.0028;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227587583 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227587736 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.834;LDAF=0.0031;AVGPOST=0.9975;RSQ=0.6687;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227587772 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.932;LDAF=0.1558;AVGPOST=0.9802;RSQ=0.9466;ERATE=0.0007;THETA=0.0006;AC=340;AN=2184 GT:DS:GL:BD 0.15567766 0
1 227587776 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.944;BRSQ=0.858;LDAF=0.7983;AVGPOST=0.9477;RSQ=0.8779;ERATE=0.0058;THETA=0.0002;AC=1769;AN=2184 GT:DS:GL:BD 0.80998170 1
1 227587871 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.616;LDAF=0.0060;AVGPOST=0.9944;RSQ=0.6322;ERATE=0.0007;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227587921 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.914;BRSQ=0.813;LDAF=0.7772;AVGPOST=0.9635;RSQ=0.9236;ERATE=0.0011;THETA=0.0051;AC=1710;AN=2184 GT:DS:GL:BD 0.78296703 1
1 227587972 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.855;LDAF=0.0257;AVGPOST=0.9934;RSQ=0.8893;ERATE=0.0008;THETA=0.0008;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 227588002 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.877;BRSQ=0.731;LDAF=0.7193;AVGPOST=0.8830;RSQ=0.7794;ERATE=0.0093;THETA=0.0004;AC=1612;AN=2184 GT:DS:GL:BD 0.73809522 1
1 227588016 . A AC 23 PASS INDEL;BAVGPOST=0.968;BRSQ=0.251;LDAF=0.0484;AVGPOST=0.9316;RSQ=0.4315;ERATE=0.0051;THETA=0.0006;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 227588196 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.830;BRSQ=0.650;LDAF=0.6620;AVGPOST=0.7949;RSQ=0.6507;ERATE=0.0318;THETA=0.0018;AC=1525;AN=2184 GT:DS:GL:BD 0.69826007 1
1 227588276 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.912;LDAF=0.0292;AVGPOST=0.9900;RSQ=0.8760;ERATE=0.0005;THETA=0.0034;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 227588279 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.716;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6568;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227588324 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0120;AVGPOST=0.9993;RSQ=0.9750;ERATE=0.0004;THETA=0.0012;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 227588445 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0019;AVGPOST=0.9977;RSQ=0.6032;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227588456 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8109;AVGPOST=0.9979;RSQ=0.9951;ERATE=0.0003;THETA=0.0002;AC=1771;AN=2184 GT:DS:GL:BD 0.81089741 1
1 227588544 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0134;AVGPOST=0.9969;RSQ=0.9163;ERATE=0.0004;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 227588546 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4863;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227588556 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.2892;AVGPOST=0.9987;RSQ=0.9973;ERATE=0.0003;THETA=0.0013;AC=631;AN=2184 GT:DS:GL:BD 0.28891942 0
1 227588596 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5614;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227588942 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.5260;AVGPOST=0.9931;RSQ=0.9895;ERATE=0.0014;THETA=0.0004;AC=1149;AN=2184 GT:DS:GL:BD 0.52609891 1
1 227589008 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0112;AVGPOST=0.9995;RSQ=0.9780;ERATE=0.0003;THETA=0.0018;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 227589071 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.759;LDAF=0.0037;AVGPOST=0.9988;RSQ=0.8736;ERATE=0.0002;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227589155 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0015;AVGPOST=0.9983;RSQ=0.5289;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227589174 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.813;LDAF=0.0028;AVGPOST=0.9988;RSQ=0.8303;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227589225 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8076;AVGPOST=0.9939;RSQ=0.9843;ERATE=0.0006;THETA=0.0016;AC=1769;AN=2184 GT:DS:GL:BD 0.80998170 1
1 227589263 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0015;AVGPOST=0.9983;RSQ=0.6082;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227589475 . C CT 2909 PASS INDEL;BAVGPOST=0.984;BRSQ=0.940;LDAF=0.1417;AVGPOST=0.9899;RSQ=0.9699;ERATE=0.0004;THETA=0.0006;AC=312;AN=2184 GT:DS:GL:BD 0.14285715 0
1 227589476 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.949;LDAF=0.1509;AVGPOST=0.9908;RSQ=0.9739;ERATE=0.0004;THETA=0.0003;AC=334;AN=2184 GT:DS:GL:BD 0.15293041 0
1 227589478 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.945;LDAF=0.1431;AVGPOST=0.9896;RSQ=0.9694;ERATE=0.0003;THETA=0.0003;AC=314;AN=2184 GT:DS:GL:BD 0.14377290 0
1 227589564 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.749;LDAF=0.0077;AVGPOST=0.9967;RSQ=0.8279;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 227589700 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5699;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227589795 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0070;AVGPOST=0.9997;RSQ=0.9779;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 227589801 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0057;AVGPOST=0.9995;RSQ=0.9555;ERATE=0.0003;THETA=0.0013;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227589852 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8105;AVGPOST=0.9989;RSQ=0.9968;ERATE=0.0003;THETA=0.0004;AC=1771;AN=2184 GT:DS:GL:BD 0.81089741 1
1 227589890 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8106;AVGPOST=0.9989;RSQ=0.9969;ERATE=0.0004;THETA=0.0003;AC=1771;AN=2184 GT:DS:GL:BD 0.81089741 1
1 227589909 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8109;AVGPOST=0.9989;RSQ=0.9968;ERATE=0.0003;THETA=0.0003;AC=1771;AN=2184 GT:DS:GL:BD 0.81089741 1
1 227589948 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0111;AVGPOST=0.9996;RSQ=0.9854;ERATE=0.0003;THETA=0.0010;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 227589991 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.766;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7844;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227590005 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8104;AVGPOST=0.9986;RSQ=0.9961;ERATE=0.0003;THETA=0.0006;AC=1771;AN=2184 GT:DS:GL:BD 0.81089741 1
1 227590220 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.726;LDAF=0.0032;AVGPOST=0.9980;RSQ=0.7427;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227590228 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0114;AVGPOST=0.9951;RSQ=0.8109;ERATE=0.0007;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 227590282 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.975;LDAF=0.2508;AVGPOST=0.9923;RSQ=0.9836;ERATE=0.0007;THETA=0.0061;AC=544;AN=2184 GT:DS:GL:BD 0.24908425 0
1 227590301 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0091;AVGPOST=0.9990;RSQ=0.9570;ERATE=0.0004;THETA=0.0008;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 227590325 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.708;LDAF=0.0031;AVGPOST=0.9981;RSQ=0.7336;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227590346 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.948;BRSQ=0.867;LDAF=0.7745;AVGPOST=0.9606;RSQ=0.9218;ERATE=0.0024;THETA=0.0003;AC=1700;AN=2184 GT:DS:GL:BD 0.77838826 1
1 227590352 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.785;LDAF=0.0144;AVGPOST=0.9960;RSQ=0.8846;ERATE=0.0005;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 227590365 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.576;LDAF=0.0016;AVGPOST=0.9974;RSQ=0.4030;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227590408 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0114;AVGPOST=0.9941;RSQ=0.7875;ERATE=0.0010;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 227590477 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.556;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5195;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227590721 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.8095;AVGPOST=0.9971;RSQ=0.9922;ERATE=0.0005;THETA=0.0004;AC=1770;AN=2184 GT:DS:GL:BD 0.81043959 1
1 227590739 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.958;LDAF=0.2821;AVGPOST=0.9912;RSQ=0.9846;ERATE=0.0003;THETA=0.0006;AC=617;AN=2184 GT:DS:GL:BD 0.28250915 0
1 227590823 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.987;LDAF=0.1464;AVGPOST=0.9969;RSQ=0.9905;ERATE=0.0003;THETA=0.0008;AC=320;AN=2184 GT:DS:GL:BD 0.14652015 0
1 227590957 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8587;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227590987 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.695;LDAF=0.0023;AVGPOST=0.9972;RSQ=0.4852;ERATE=0.0003;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227591029 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.699;LDAF=0.0057;AVGPOST=0.9931;RSQ=0.5106;ERATE=0.0011;THETA=0.0014;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227591057 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.883;LDAF=0.0112;AVGPOST=0.9993;RSQ=0.9689;ERATE=0.0003;THETA=0.0017;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 227591162 rs56358423 C CAT 9208 PASS INDEL;BAVGPOST=0.695;BRSQ=0.563;LDAF=0.5506;AVGPOST=0.7560;RSQ=0.6780;ERATE=0.0150;THETA=0.0003;AC=1253;AN=2184 GT:DS:GL:BD 0.57371795 1
1 227591165 rs55882012 G GAT 4365 PASS INDEL;BAVGPOST=0.622;BRSQ=0.490;LDAF=0.5089;AVGPOST=0.7417;RSQ=0.6584;ERATE=0.0120;THETA=0.0009;AC=1169;AN=2184 GT:DS:GL:BD 0.53525639 1
1 227591180 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.384;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5274;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227591273 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8107;AVGPOST=0.9982;RSQ=0.9959;ERATE=0.0003;THETA=0.0004;AC=1771;AN=2184 GT:DS:GL:BD 0.81089741 1
1 227591281 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.785;LDAF=0.0078;AVGPOST=0.9962;RSQ=0.8140;ERATE=0.0007;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 227591291 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.962;LDAF=0.8040;AVGPOST=0.9929;RSQ=0.9833;ERATE=0.0007;THETA=0.0003;AC=1762;AN=2184 GT:DS:GL:BD 0.80677658 1
1 227591322 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6915;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227591373 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7630;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227591374 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5786;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227591410 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8097;AVGPOST=0.9985;RSQ=0.9958;ERATE=0.0005;THETA=0.0024;AC=1769;AN=2184 GT:DS:GL:BD 0.80998170 1
1 227591422 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.804;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8746;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227591477 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.8109;AVGPOST=0.9994;RSQ=0.9981;ERATE=0.0003;THETA=0.0004;AC=1771;AN=2184 GT:DS:GL:BD 0.81089741 1
1 227591482 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8101;AVGPOST=0.9977;RSQ=0.9940;ERATE=0.0005;THETA=0.0003;AC=1771;AN=2184 GT:DS:GL:BD 0.81089741 1
1 227591543 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8098;AVGPOST=0.9984;RSQ=0.9963;ERATE=0.0002;THETA=0.0006;AC=1768;AN=2184 GT:DS:GL:BD 0.80952382 1
1 227591621 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.978;LDAF=0.1996;AVGPOST=0.9946;RSQ=0.9875;ERATE=0.0006;THETA=0.0008;AC=433;AN=2184 GT:DS:GL:BD 0.19826007 0
1 227591804 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.925;LDAF=0.7858;AVGPOST=0.9793;RSQ=0.9565;ERATE=0.0017;THETA=0.0002;AC=1719;AN=2184 GT:DS:GL:BD 0.78708792 1
1 227591842 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0111;AVGPOST=0.9995;RSQ=0.9809;ERATE=0.0003;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 227591846 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8105;AVGPOST=0.9988;RSQ=0.9966;ERATE=0.0004;THETA=0.0006;AC=1771;AN=2184 GT:DS:GL:BD 0.81089741 1
1 227591849 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9341;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227591876 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.986;LDAF=0.1115;AVGPOST=0.9926;RSQ=0.9728;ERATE=0.0004;THETA=0.0020;AC=244;AN=2184 GT:DS:GL:BD 0.11172161 0
1 227591896 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0292;AVGPOST=0.9978;RSQ=0.9681;ERATE=0.0004;THETA=0.0003;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 227591914 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.892;LDAF=0.0071;AVGPOST=0.9992;RSQ=0.9447;ERATE=0.0004;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 227592011 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.754;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5170;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227592022 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.953;BRSQ=0.917;LDAF=0.7375;AVGPOST=0.9473;RSQ=0.9100;ERATE=0.0054;THETA=0.0004;AC=1627;AN=2184 GT:DS:GL:BD 0.74496335 1
1 227592111 . CGA C 28745 PASS INDEL;BAVGPOST=0.955;BRSQ=0.927;LDAF=0.7606;AVGPOST=0.9724;RSQ=0.9485;ERATE=0.0007;THETA=0.0003;AC=1669;AN=2184 GT:DS:GL:BD 0.76419413 1
1 227592112 . GAGA G 19751 PASS INDEL;BAVGPOST=0.821;BRSQ=0.700;LDAF=0.6053;AVGPOST=0.7890;RSQ=0.6680;ERATE=0.0434;THETA=0.0002;AC=1390;AN=2184 GT:DS:GL:BD 0.63644689 1
1 227592113 . AG A 40783 PASS INDEL;BAVGPOST=0.954;BRSQ=0.927;LDAF=0.7578;AVGPOST=0.9724;RSQ=0.9502;ERATE=0.0011;THETA=0.0005;AC=1664;AN=2184 GT:DS:GL:BD 0.76190478 1
1 227592126 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.941;BRSQ=0.904;LDAF=0.4293;AVGPOST=0.9272;RSQ=0.8924;ERATE=0.0161;THETA=0.0004;AC=950;AN=2184 GT:DS:GL:BD 0.43498167 0
1 227592132 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0093;AVGPOST=0.9985;RSQ=0.9391;ERATE=0.0002;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 227592289 . C CA 44814 PASS INDEL;BAVGPOST=0.925;BRSQ=0.848;LDAF=0.7439;AVGPOST=0.9276;RSQ=0.8705;ERATE=0.0082;THETA=0.0006;AC=1647;AN=2184 GT:DS:GL:BD 0.75412089 1
1 227592329 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0006;AVGPOST=0.9992;RSQ=0.4224;ERATE=0.0002;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227592339 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8481;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227592448 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.6652;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227592546 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0117;AVGPOST=0.9995;RSQ=0.9847;ERATE=0.0003;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 227592710 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.8109;AVGPOST=0.9993;RSQ=0.9980;ERATE=0.0003;THETA=0.0003;AC=1771;AN=2184 GT:DS:GL:BD 0.81089741 1
1 227592865 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9134;ERATE=0.0003;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227593081 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227593136 . CCAAA C 361 PASS INDEL;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0025;AVGPOST=0.9992;RSQ=0.8566;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227593248 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8563;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227593326 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8098;AVGPOST=0.9968;RSQ=0.9914;ERATE=0.0010;THETA=0.0003;AC=1771;AN=2184 GT:DS:GL:BD 0.81089741 1
1 227593457 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2875;AVGPOST=0.9967;RSQ=0.9936;ERATE=0.0006;THETA=0.0005;AC=626;AN=2184 GT:DS:GL:BD 0.28663003 0
1 227593590 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.8049;AVGPOST=0.9936;RSQ=0.9851;ERATE=0.0006;THETA=0.0004;AC=1761;AN=2184 GT:DS:GL:BD 0.80631870 1
1 227593697 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.627;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6252;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227593810 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.971;LDAF=0.8083;AVGPOST=0.9959;RSQ=0.9890;ERATE=0.0009;THETA=0.0006;AC=1769;AN=2184 GT:DS:GL:BD 0.80998170 1
1 227593847 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.913;BRSQ=0.806;LDAF=0.7389;AVGPOST=0.9106;RSQ=0.8307;ERATE=0.0074;THETA=0.0005;AC=1663;AN=2184 GT:DS:GL:BD 0.76144689 1
1 227593875 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.955;BRSQ=0.931;LDAF=0.4775;AVGPOST=0.9366;RSQ=0.9050;ERATE=0.0052;THETA=0.0002;AC=1056;AN=2184 GT:DS:GL:BD 0.48351648 0
1 227593912 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.517;LDAF=0.0135;AVGPOST=0.9915;RSQ=0.7485;ERATE=0.0006;THETA=0.0014;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227593945 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.416;LDAF=0.0033;AVGPOST=0.9953;RSQ=0.4838;ERATE=0.0006;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227593966 . C CAAA 50886 PASS INDEL;BAVGPOST=0.975;BRSQ=0.939;LDAF=0.7919;AVGPOST=0.9624;RSQ=0.9183;ERATE=0.0050;THETA=0.0054;AC=1748;AN=2184 GT:DS:GL:BD 0.80036628 1
1 227593981 . C CA 475 PASS INDEL;BAVGPOST=0.977;BRSQ=0.669;LDAF=0.0409;AVGPOST=0.9734;RSQ=0.7587;ERATE=0.0019;THETA=0.0004;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 227593985 . AAC A 2108 PASS INDEL;BAVGPOST=0.783;BRSQ=0.545;LDAF=0.2989;AVGPOST=0.7750;RSQ=0.5796;ERATE=0.0384;THETA=0.0010;AC=565;AN=2184 GT:DS:GL:BD 0.25869963 0
1 227593986 . AC A 12400 PASS INDEL;BAVGPOST=0.841;BRSQ=0.752;LDAF=0.5120;AVGPOST=0.8398;RSQ=0.7704;ERATE=0.0210;THETA=0.0002;AC=1148;AN=2184 GT:DS:GL:BD 0.52564102 1
1 227593987 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.939;BRSQ=0.860;LDAF=0.7349;AVGPOST=0.9072;RSQ=0.8347;ERATE=0.0197;THETA=0.0006;AC=1639;AN=2184 GT:DS:GL:BD 0.75045788 1
1 227594052 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0120;AVGPOST=0.9982;RSQ=0.9425;ERATE=0.0003;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 227594084 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5274;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227594109 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0022;AVGPOST=0.9987;RSQ=0.7386;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227594183 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5741;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227594195 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.890;LDAF=0.0040;AVGPOST=0.9992;RSQ=0.9398;ERATE=0.0002;THETA=0.0012;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227594408 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0041;AVGPOST=0.9991;RSQ=0.9186;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227594603 . C CA 260 PASS INDEL;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0042;AVGPOST=0.9969;RSQ=0.6816;ERATE=0.0006;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227594620 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.743;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6701;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227594621 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227594632 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2456;AVGPOST=0.9968;RSQ=0.9933;ERATE=0.0003;THETA=0.0007;AC=536;AN=2184 GT:DS:GL:BD 0.24542125 0
1 227594641 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.748;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6259;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227594647 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.2004;AVGPOST=0.9964;RSQ=0.9916;ERATE=0.0003;THETA=0.0012;AC=436;AN=2184 GT:DS:GL:BD 0.19963370 0
1 227594769 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1614;AVGPOST=0.9972;RSQ=0.9916;ERATE=0.0005;THETA=0.0005;AC=352;AN=2184 GT:DS:GL:BD 0.16117217 0
1 227594877 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.861;LDAF=0.0091;AVGPOST=0.9989;RSQ=0.9529;ERATE=0.0004;THETA=0.0001;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 227594909 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.742;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4438;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227594942 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0020;AVGPOST=0.9978;RSQ=0.5222;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227594979 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9998;RSQ=0.9618;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227594992 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9359;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227595032 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8161;ERATE=0.0003;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227595094 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8106;AVGPOST=0.9984;RSQ=0.9957;ERATE=0.0006;THETA=0.0014;AC=1771;AN=2184 GT:DS:GL:BD 0.81089741 1
1 227595183 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0013;AVGPOST=0.9981;RSQ=0.4077;ERATE=0.0005;THETA=0.0071;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227595279 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227595301 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.8078;AVGPOST=0.9945;RSQ=0.9876;ERATE=0.0003;THETA=0.0002;AC=1764;AN=2184 GT:DS:GL:BD 0.80769229 1
1 227595305 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.8088;AVGPOST=0.9953;RSQ=0.9890;ERATE=0.0005;THETA=0.0002;AC=1768;AN=2184 GT:DS:GL:BD 0.80952382 1
1 227595322 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.8088;AVGPOST=0.9956;RSQ=0.9896;ERATE=0.0004;THETA=0.0030;AC=1768;AN=2184 GT:DS:GL:BD 0.80952382 1
1 227595385 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0101;AVGPOST=0.9999;RSQ=0.9940;ERATE=0.0003;THETA=0.0043;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 227595386 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7533;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227595422 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5901;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227595526 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.7063;ERATE=0.0002;THETA=0.0036;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227595533 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8096;AVGPOST=0.9984;RSQ=0.9964;ERATE=0.0004;THETA=0.0005;AC=1768;AN=2184 GT:DS:GL:BD 0.80952382 1
1 227595538 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0072;AVGPOST=0.9990;RSQ=0.9438;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 227595540 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.8028;AVGPOST=0.9980;RSQ=0.9954;ERATE=0.0004;THETA=0.0040;AC=1753;AN=2184 GT:DS:GL:BD 0.80265570 1
1 227595562 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.8100;AVGPOST=0.9985;RSQ=0.9963;ERATE=0.0004;THETA=0.0003;AC=1770;AN=2184 GT:DS:GL:BD 0.81043959 1
1 227595607 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.8114;AVGPOST=0.9980;RSQ=0.9954;ERATE=0.0004;THETA=0.0003;AC=1773;AN=2184 GT:DS:GL:BD 0.81181318 1
1 227595691 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6983;ERATE=0.0003;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227595713 rs113501880 CCTAT C 6823 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0350;AVGPOST=0.9992;RSQ=0.9910;ERATE=0.0003;THETA=0.0002;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 227595728 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.5185;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227595825 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6411;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227595904 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.834;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227595918 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0038;AVGPOST=0.9974;RSQ=0.7641;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227595962 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9473;ERATE=0.0002;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227595966 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3300;AVGPOST=0.9986;RSQ=0.9972;ERATE=0.0003;THETA=0.0002;AC=720;AN=2184 GT:DS:GL:BD 0.32967034 0
1 227595972 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8625;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227596084 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0097;AVGPOST=0.9996;RSQ=0.9818;ERATE=0.0003;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 227596120 . T TA 97 PASS INDEL;BAVGPOST=0.999;BRSQ=0.760;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6353;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227596210 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0048;AVGPOST=0.9990;RSQ=0.9156;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227596235 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0834;AVGPOST=0.9990;RSQ=0.9954;ERATE=0.0002;THETA=0.0004;AC=183;AN=2184 GT:DS:GL:BD 0.08379121 0
1 227596247 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0028;AVGPOST=0.9986;RSQ=0.8360;ERATE=0.0002;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227596280 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5242;AVGPOST=0.9979;RSQ=0.9965;ERATE=0.0004;THETA=0.0004;AC=1145;AN=2184 GT:DS:GL:BD 0.52426738 1
1 227596333 . CTT C 70 PASS INDEL;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227596344 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0002;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227596564 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0004;AVGPOST=0.9993;RSQ=0.3717;ERATE=0.0003;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 227596565 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8101;AVGPOST=0.9986;RSQ=0.9961;ERATE=0.0005;THETA=0.0002;AC=1769;AN=2184 GT:DS:GL:BD 0.80998170 1
1 227596605 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0129;AVGPOST=0.9998;RSQ=0.9914;ERATE=0.0003;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 227596649 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7184;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227596776 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8114;AVGPOST=0.9983;RSQ=0.9957;ERATE=0.0004;THETA=0.0009;AC=1772;AN=2184 GT:DS:GL:BD 0.81135529 1
1 227596873 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7308;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227596889 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.506;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4073;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227596936 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0038;AVGPOST=0.9968;RSQ=0.6846;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227597031 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0093;AVGPOST=0.9994;RSQ=0.9784;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 227597096 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8936;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227597176 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227597285 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8104;AVGPOST=0.9992;RSQ=0.9976;ERATE=0.0003;THETA=0.0005;AC=1771;AN=2184 GT:DS:GL:BD 0.81089741 1
1 227597323 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9180;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227597369 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1474;AVGPOST=0.9985;RSQ=0.9956;ERATE=0.0003;THETA=0.0008;AC=323;AN=2184 GT:DS:GL:BD 0.14789377 0
1 227597415 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5240;AVGPOST=0.9989;RSQ=0.9979;ERATE=0.0006;THETA=0.0002;AC=1145;AN=2184 GT:DS:GL:BD 0.52426738 1
1 227597419 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8097;AVGPOST=0.9981;RSQ=0.9963;ERATE=0.0003;THETA=0.0005;AC=1768;AN=2184 GT:DS:GL:BD 0.80952382 1
1 227597430 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0002;THETA=0.0001;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227597483 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8393;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227597496 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.2875;AVGPOST=0.9976;RSQ=0.9953;ERATE=0.0006;THETA=0.0001;AC=626;AN=2184 GT:DS:GL:BD 0.28663003 0
1 227597668 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.794;LDAF=0.0029;AVGPOST=0.9978;RSQ=0.7153;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227597713 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6199;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227597798 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.8102;AVGPOST=0.9978;RSQ=0.9939;ERATE=0.0006;THETA=0.0001;AC=1771;AN=2184 GT:DS:GL:BD 0.81089741 1
1 227597824 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.5721;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227597882 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.8129;AVGPOST=0.9986;RSQ=0.9964;ERATE=0.0003;THETA=0.0003;AC=1775;AN=2184 GT:DS:GL:BD 0.81272894 1
1 227598056 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0046;AVGPOST=0.9984;RSQ=0.8466;ERATE=0.0004;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227598067 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7349;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227598071 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8107;AVGPOST=0.9995;RSQ=0.9985;ERATE=0.0003;THETA=0.0003;AC=1771;AN=2184 GT:DS:GL:BD 0.81089741 1
1 227598121 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.2862;AVGPOST=0.9979;RSQ=0.9961;ERATE=0.0004;THETA=0.0002;AC=626;AN=2184 GT:DS:GL:BD 0.28663003 0
1 227598169 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8108;AVGPOST=0.9998;RSQ=0.9995;ERATE=0.0002;THETA=0.0006;AC=1771;AN=2184 GT:DS:GL:BD 0.81089741 1
1 227598178 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0019;AVGPOST=0.9991;RSQ=0.8556;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227598224 . C CTTCTT 250 PASS INDEL;BAVGPOST=0.997;BRSQ=0.726;LDAF=0.0089;AVGPOST=0.9916;RSQ=0.6282;ERATE=0.0009;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227598396 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227598444 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0096;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0001;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 227598446 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8067;AVGPOST=1.0000;RSQ=0.9999;ERATE=0.0002;THETA=0.0003;AC=1762;AN=2184 GT:DS:GL:BD 0.80677658 1
1 227598466 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0078;AVGPOST=1.0000;RSQ=0.9972;ERATE=0.0002;THETA=0.0010;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227598528 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227598619 . CT C 81 PASS INDEL;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6092;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227598740 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8073;AVGPOST=0.9996;RSQ=0.9992;ERATE=0.0002;THETA=0.0005;AC=1763;AN=2184 GT:DS:GL:BD 0.80723441 1
1 227598753 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0073;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0001;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 227598766 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8068;AVGPOST=0.9996;RSQ=0.9991;ERATE=0.0002;THETA=0.0002;AC=1762;AN=2184 GT:DS:GL:BD 0.80677658 1
1 227598931 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227598965 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.8064;AVGPOST=0.9995;RSQ=0.9987;ERATE=0.0003;THETA=0.0002;AC=1762;AN=2184 GT:DS:GL:BD 0.80677658 1
1 227599014 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8030;AVGPOST=1.0000;RSQ=0.9999;ERATE=0.0002;THETA=0.0037;AC=1754;AN=2184 GT:DS:GL:BD 0.80311358 1
1 227599015 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0085;AVGPOST=0.9997;RSQ=0.9886;ERATE=0.0002;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 227599016 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9525;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227599030 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0151;AVGPOST=0.9999;RSQ=0.9974;ERATE=0.0002;THETA=0.0002;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 227599079 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3655;AVGPOST=0.9994;RSQ=0.9989;ERATE=0.0007;THETA=0.0002;AC=798;AN=2184 GT:DS:GL:BD 0.36538461 0
1 227599174 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.7953;AVGPOST=0.9985;RSQ=0.9968;ERATE=0.0003;THETA=0.0004;AC=1738;AN=2184 GT:DS:GL:BD 0.79578757 1
1 227599199 . A AC 2490 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0170;AVGPOST=0.9998;RSQ=0.9934;ERATE=0.0003;THETA=0.0007;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 227599218 . CAATG C 42 PASS INDEL;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227599324 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.8069;AVGPOST=0.9986;RSQ=0.9967;ERATE=0.0003;THETA=0.0028;AC=1762;AN=2184 GT:DS:GL:BD 0.80677658 1
1 227599390 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9380;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227599398 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0080;AVGPOST=0.9993;RSQ=0.9670;ERATE=0.0002;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227599438 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0069;AVGPOST=0.9997;RSQ=0.9811;ERATE=0.0003;THETA=0.0014;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 227599452 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8070;AVGPOST=0.9980;RSQ=0.9945;ERATE=0.0005;THETA=0.0004;AC=1764;AN=2184 GT:DS:GL:BD 0.80769229 1
1 227599484 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0002;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227599578 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.965;LDAF=0.0449;AVGPOST=0.9972;RSQ=0.9743;ERATE=0.0003;THETA=0.0004;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 227599709 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0084;AVGPOST=0.9988;RSQ=0.9514;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227599811 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.786;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9167;ERATE=0.0002;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227599827 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8081;AVGPOST=0.9990;RSQ=0.9972;ERATE=0.0004;THETA=0.0003;AC=1766;AN=2184 GT:DS:GL:BD 0.80860806 1
1 227599850 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6386;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227599891 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.964;BRSQ=0.908;LDAF=0.7802;AVGPOST=0.9729;RSQ=0.9437;ERATE=0.0014;THETA=0.0004;AC=1716;AN=2184 GT:DS:GL:BD 0.78571427 1
1 227599955 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0043;AVGPOST=0.9983;RSQ=0.8439;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227600018 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.7994;AVGPOST=0.9860;RSQ=0.9688;ERATE=0.0012;THETA=0.0037;AC=1746;AN=2184 GT:DS:GL:BD 0.79945058 1
1 227600026 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.600;LDAF=0.0038;AVGPOST=0.9955;RSQ=0.5477;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227600071 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.924;BRSQ=0.830;LDAF=0.7269;AVGPOST=0.8705;RSQ=0.7369;ERATE=0.0306;THETA=0.0005;AC=1644;AN=2184 GT:DS:GL:BD 0.75274724 1
1 227600184 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.896;LDAF=0.0051;AVGPOST=0.9993;RSQ=0.9382;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227600254 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.8029;AVGPOST=0.9994;RSQ=0.9982;ERATE=0.0003;THETA=0.0004;AC=1754;AN=2184 GT:DS:GL:BD 0.80311358 1
1 227600272 . A ATG 12765 PASS INDEL;BAVGPOST=0.979;BRSQ=0.953;LDAF=0.2882;AVGPOST=0.9816;RSQ=0.9669;ERATE=0.0027;THETA=0.0004;AC=635;AN=2184 GT:DS:GL:BD 0.29075092 0
1 227600315 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227600365 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9403;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227600385 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0077;AVGPOST=0.9993;RSQ=0.9654;ERATE=0.0003;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 227600416 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8084;AVGPOST=0.9993;RSQ=0.9980;ERATE=0.0004;THETA=0.0004;AC=1766;AN=2184 GT:DS:GL:BD 0.80860806 1
1 227600509 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8092;AVGPOST=0.9992;RSQ=0.9976;ERATE=0.0005;THETA=0.0004;AC=1768;AN=2184 GT:DS:GL:BD 0.80952382 1
1 227600694 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0034;AVGPOST=0.9993;RSQ=0.9301;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227600714 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8073;AVGPOST=0.9992;RSQ=0.9978;ERATE=0.0003;THETA=0.0004;AC=1764;AN=2184 GT:DS:GL:BD 0.80769229 1
1 227600870 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0225;AVGPOST=0.9996;RSQ=0.9926;ERATE=0.0002;THETA=0.0006;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 227600877 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227600884 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7206;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227601031 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.776;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6470;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227601032 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9107;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227601170 . C CA 37 PASS INDEL;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.5875;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227601226 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.793;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.8193;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227601228 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.864;LDAF=0.0058;AVGPOST=0.9977;RSQ=0.8722;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227601320 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.972;LDAF=0.8055;AVGPOST=0.9947;RSQ=0.9873;ERATE=0.0008;THETA=0.0005;AC=1759;AN=2184 GT:DS:GL:BD 0.80540293 1
1 227601365 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0083;AVGPOST=0.9989;RSQ=0.9489;ERATE=0.0003;THETA=0.0009;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227601392 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227601447 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0095;AVGPOST=0.9982;RSQ=0.9237;ERATE=0.0004;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 227601502 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.924;LDAF=0.7909;AVGPOST=0.9846;RSQ=0.9646;ERATE=0.0006;THETA=0.0009;AC=1734;AN=2184 GT:DS:GL:BD 0.79395604 1
1 227601545 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.976;LDAF=0.7975;AVGPOST=0.9847;RSQ=0.9631;ERATE=0.0014;THETA=0.0021;AC=1753;AN=2184 GT:DS:GL:BD 0.80265570 1
1 227601613 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8073;AVGPOST=0.9945;RSQ=0.9861;ERATE=0.0008;THETA=0.0007;AC=1766;AN=2184 GT:DS:GL:BD 0.80860806 1
1 227601767 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8081;AVGPOST=0.9988;RSQ=0.9966;ERATE=0.0004;THETA=0.0051;AC=1766;AN=2184 GT:DS:GL:BD 0.80860806 1
1 227601801 rs55945803 ATGGGGGAACAGCCAGTCAG A 143289 PASS INDEL;BAVGPOST=0.971;BRSQ=0.932;LDAF=0.7726;AVGPOST=0.9598;RSQ=0.9180;ERATE=0.0044;THETA=0.0011;AC=1701;AN=2184 GT:DS:GL:BD 0.77884614 1
1 227601832 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0030;AVGPOST=0.9982;RSQ=0.7553;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227601887 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0076;AVGPOST=0.9982;RSQ=0.9222;ERATE=0.0002;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 227601908 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227602061 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0014;AVGPOST=0.9996;RSQ=0.8687;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227602109 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.974;LDAF=0.0385;AVGPOST=0.9996;RSQ=0.9956;ERATE=0.0002;THETA=0.0004;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 227602340 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.905;LDAF=0.0451;AVGPOST=0.9957;RSQ=0.9618;ERATE=0.0003;THETA=0.0005;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 227602427 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0087;AVGPOST=0.9996;RSQ=0.9778;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 227602560 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9998;RSQ=0.9841;ERATE=0.0002;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 227602611 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6633;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227602623 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.9508;AVGPOST=0.9984;RSQ=0.9878;ERATE=0.0002;THETA=0.0002;AC=2078;AN=2184 GT:DS:GL:BD 0.95146519 1
1 227602770 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0380;AVGPOST=0.9995;RSQ=0.9930;ERATE=0.0003;THETA=0.0003;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 227602870 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0082;AVGPOST=0.9996;RSQ=0.9787;ERATE=0.0003;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 227602913 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.822;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7490;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227603000 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6707;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227603016 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.1286;AVGPOST=0.9970;RSQ=0.9905;ERATE=0.0004;THETA=0.0003;AC=282;AN=2184 GT:DS:GL:BD 0.12912089 0
1 227603052 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6997;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227603127 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9697;ERATE=0.0002;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227603164 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.747;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227603207 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.988;LDAF=0.1975;AVGPOST=0.9971;RSQ=0.9927;ERATE=0.0005;THETA=0.0003;AC=430;AN=2184 GT:DS:GL:BD 0.19688645 0
1 227603235 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7163;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227603239 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.826;LDAF=0.0059;AVGPOST=0.9966;RSQ=0.7831;ERATE=0.0004;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227603287 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.746;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.7367;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227603304 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8594;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227603382 . G GT 55 PASS INDEL;BAVGPOST=0.988;BRSQ=0.558;LDAF=0.0324;AVGPOST=0.9592;RSQ=0.4992;ERATE=0.0089;THETA=0.0007;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 227603451 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0007;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227603473 . C CT 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5110;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227603477 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.959;LDAF=0.0162;AVGPOST=0.9985;RSQ=0.9623;ERATE=0.0003;THETA=0.0009;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 227603488 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9344;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227603689 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.731;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227603741 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4379;ERATE=0.0003;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227603763 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.2901;AVGPOST=0.9948;RSQ=0.9909;ERATE=0.0004;THETA=0.0001;AC=634;AN=2184 GT:DS:GL:BD 0.29029304 0
1 227603796 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227604049 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0090;AVGPOST=0.9995;RSQ=0.9802;ERATE=0.0002;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 227604269 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6542;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227604291 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0076;AVGPOST=0.9994;RSQ=0.9629;ERATE=0.0003;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 227604295 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2963;AVGPOST=0.9975;RSQ=0.9953;ERATE=0.0003;THETA=0.0002;AC=648;AN=2184 GT:DS:GL:BD 0.29670331 0
1 227604542 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.692;LDAF=0.0022;AVGPOST=0.9989;RSQ=0.7934;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227604621 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0101;AVGPOST=0.9998;RSQ=0.9920;ERATE=0.0002;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 227604734 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0035;AVGPOST=0.9965;RSQ=0.6117;ERATE=0.0006;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227604925 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0028;AVGPOST=0.9980;RSQ=0.7242;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227605097 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0385;AVGPOST=0.9995;RSQ=0.9940;ERATE=0.0003;THETA=0.0003;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 227605206 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9997;RSQ=0.9590;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227605231 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8477;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227605240 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227605263 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0024;AVGPOST=0.9985;RSQ=0.7450;ERATE=0.0004;THETA=0.0025;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227605354 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.882;LDAF=0.0040;AVGPOST=0.9985;RSQ=0.8692;ERATE=0.0003;THETA=0.0018;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227605363 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227605401 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9545;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227605435 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7691;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227605533 . A AT 24 PASS INDEL;BAVGPOST=0.999;BRSQ=0.544;LDAF=0.0138;AVGPOST=0.9852;RSQ=0.6054;ERATE=0.0016;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 227605738 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.8066;AVGPOST=0.9987;RSQ=0.9962;ERATE=0.0004;THETA=0.0004;AC=1762;AN=2184 GT:DS:GL:BD 0.80677658 1
1 227605854 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227605976 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227606201 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0068;AVGPOST=0.9996;RSQ=0.9744;ERATE=0.0003;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 227606299 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5467;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227606306 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.806;LDAF=0.0072;AVGPOST=0.9943;RSQ=0.7047;ERATE=0.0002;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227606329 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0085;AVGPOST=0.9942;RSQ=0.7421;ERATE=0.0006;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 227606362 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.676;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6737;ERATE=0.0003;THETA=0.0045;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227606393 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.848;LDAF=0.0066;AVGPOST=0.9968;RSQ=0.8165;ERATE=0.0005;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227606457 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0051;AVGPOST=0.9942;RSQ=0.5886;ERATE=0.0006;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227606479 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.550;LDAF=0.0046;AVGPOST=0.9970;RSQ=0.7291;ERATE=0.0006;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227606520 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0045;AVGPOST=0.9972;RSQ=0.7391;ERATE=0.0005;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227606521 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227606557 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0079;AVGPOST=0.9998;RSQ=0.9881;ERATE=0.0002;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227606606 . A AAAC 21313 PASS INDEL;BAVGPOST=0.970;BRSQ=0.913;LDAF=0.2460;AVGPOST=0.9638;RSQ=0.9218;ERATE=0.0133;THETA=0.0003;AC=534;AN=2184 GT:DS:GL:BD 0.24450549 0
1 227606608 . A AC 1788 PASS INDEL;BAVGPOST=0.912;BRSQ=0.700;LDAF=0.1579;AVGPOST=0.9140;RSQ=0.7682;ERATE=0.0059;THETA=0.0052;AC=321;AN=2184 GT:DS:GL:BD 0.14697802 0
1 227606809 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0060;AVGPOST=0.9989;RSQ=0.9437;ERATE=0.0003;THETA=0.0012;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227606856 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0129;AVGPOST=0.9983;RSQ=0.9398;ERATE=0.0004;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 227606895 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6195;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227606947 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.8060;AVGPOST=0.9968;RSQ=0.9925;ERATE=0.0004;THETA=0.0002;AC=1762;AN=2184 GT:DS:GL:BD 0.80677658 1
1 227606980 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2580;AVGPOST=0.9981;RSQ=0.9959;ERATE=0.0004;THETA=0.0004;AC=564;AN=2184 GT:DS:GL:BD 0.25824177 0
1 227607032 . T TC 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227607058 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0080;AVGPOST=0.9995;RSQ=0.9802;ERATE=0.0002;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227607094 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0036;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227607150 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8657;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227607241 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227607417 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7102;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227607456 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0004;AVGPOST=0.9998;RSQ=0.7656;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227607469 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227607516 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.822;LDAF=0.0049;AVGPOST=0.9962;RSQ=0.7475;ERATE=0.0002;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227607519 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.758;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7634;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227607548 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5935;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227607553 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0091;AVGPOST=0.9998;RSQ=0.9903;ERATE=0.0002;THETA=0.0001;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 227607680 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9804;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227607815 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227607818 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5548;AVGPOST=0.9972;RSQ=0.9954;ERATE=0.0003;THETA=0.0007;AC=1213;AN=2184 GT:DS:GL:BD 0.55540293 1
1 227608035 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7340;ERATE=0.0002;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227608072 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6607;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227608164 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7826;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227608464 . AG A 312 PASS INDEL;BAVGPOST=0.877;BRSQ=0.300;LDAF=0.1443;AVGPOST=0.8201;RSQ=0.4421;ERATE=0.0188;THETA=0.0003;AC=185;AN=2184 GT:DS:GL:BD 0.08470696 0
1 227608503 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0081;AVGPOST=0.9992;RSQ=0.9652;ERATE=0.0002;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227608577 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0840;AVGPOST=0.9982;RSQ=0.9926;ERATE=0.0003;THETA=0.0002;AC=183;AN=2184 GT:DS:GL:BD 0.08379121 0
1 227608579 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8085;AVGPOST=0.9994;RSQ=0.9981;ERATE=0.0003;THETA=0.0001;AC=1766;AN=2184 GT:DS:GL:BD 0.80860806 1
1 227608580 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.7134;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227608721 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0877;AVGPOST=0.9985;RSQ=0.9934;ERATE=0.0002;THETA=0.0002;AC=192;AN=2184 GT:DS:GL:BD 0.08791209 0
1 227608863 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.870;LDAF=0.0162;AVGPOST=0.9953;RSQ=0.8943;ERATE=0.0002;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 227608900 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0087;AVGPOST=0.9997;RSQ=0.9833;ERATE=0.0003;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 227608904 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1371;AVGPOST=0.9975;RSQ=0.9918;ERATE=0.0003;THETA=0.0006;AC=300;AN=2184 GT:DS:GL:BD 0.13736264 0
1 227609023 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8725;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227609027 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7459;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227609029 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0082;AVGPOST=0.9990;RSQ=0.9534;ERATE=0.0002;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227609061 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.825;LDAF=0.0070;AVGPOST=0.9978;RSQ=0.8693;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227609162 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227609167 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8084;AVGPOST=0.9993;RSQ=0.9979;ERATE=0.0003;THETA=0.0004;AC=1766;AN=2184 GT:DS:GL:BD 0.80860806 1
1 227609366 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.5099;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227609371 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2862;AVGPOST=0.9983;RSQ=0.9964;ERATE=0.0006;THETA=0.0002;AC=625;AN=2184 GT:DS:GL:BD 0.28617215 0
1 227609392 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9990;RSQ=0.9428;ERATE=0.0002;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 227609407 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7644;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227609581 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8677;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227609603 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6731;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227609604 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0101;AVGPOST=0.9999;RSQ=0.9940;ERATE=0.0002;THETA=0.0001;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 227609607 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0199;AVGPOST=0.9990;RSQ=0.9797;ERATE=0.0002;THETA=0.0003;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 227609720 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0856;AVGPOST=0.9979;RSQ=0.9904;ERATE=0.0004;THETA=0.0002;AC=186;AN=2184 GT:DS:GL:BD 0.08516484 0
1 227609770 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0094;AVGPOST=0.9986;RSQ=0.9452;ERATE=0.0003;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 227609891 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8078;AVGPOST=0.9976;RSQ=0.9947;ERATE=0.0003;THETA=0.0003;AC=1765;AN=2184 GT:DS:GL:BD 0.80815017 1
1 227609956 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0198;AVGPOST=0.9988;RSQ=0.9754;ERATE=0.0003;THETA=0.0003;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 227609974 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8845;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227610116 . T TA 730 PASS INDEL;BAVGPOST=0.995;BRSQ=0.774;LDAF=0.0111;AVGPOST=0.9953;RSQ=0.8188;ERATE=0.0007;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 227610119 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2412;AVGPOST=0.9988;RSQ=0.9972;ERATE=0.0004;THETA=0.0006;AC=526;AN=2184 GT:DS:GL:BD 0.24084249 0
1 227610121 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0114;AVGPOST=0.9992;RSQ=0.9698;ERATE=0.0002;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 227610126 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0843;AVGPOST=0.9994;RSQ=0.9973;ERATE=0.0003;THETA=0.0002;AC=184;AN=2184 GT:DS:GL:BD 0.08424909 0
1 227610165 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9998;RSQ=0.9618;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227610266 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0144;AVGPOST=0.9994;RSQ=0.9802;ERATE=0.0002;THETA=0.0001;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 227610481 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0439;AVGPOST=1.0000;RSQ=0.9995;ERATE=0.0002;THETA=0.0003;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 227610502 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0056;AVGPOST=0.9999;RSQ=0.9881;ERATE=0.0002;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227610535 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227610592 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0842;AVGPOST=0.9995;RSQ=0.9980;ERATE=0.0002;THETA=0.0003;AC=184;AN=2184 GT:DS:GL:BD 0.08424909 0
1 227610603 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0017;AVGPOST=0.9988;RSQ=0.7677;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227610627 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5550;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227610648 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0022;AVGPOST=0.9986;RSQ=0.7447;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227610683 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8198;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227610696 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7872;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227610742 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9555;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227610762 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6010;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227610812 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227610813 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9690;ERATE=0.0002;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227610992 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.2953;AVGPOST=0.9962;RSQ=0.9924;ERATE=0.0009;THETA=0.0004;AC=645;AN=2184 GT:DS:GL:BD 0.29532966 0
1 227611047 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.925;LDAF=0.0118;AVGPOST=0.9977;RSQ=0.9255;ERATE=0.0003;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227611143 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0018;AVGPOST=0.9974;RSQ=0.4912;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227611284 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0013;AVGPOST=0.9996;RSQ=0.8843;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227611295 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1558;AVGPOST=0.9987;RSQ=0.9959;ERATE=0.0005;THETA=0.0006;AC=340;AN=2184 GT:DS:GL:BD 0.15567766 0
1 227611436 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.8052;AVGPOST=0.9990;RSQ=0.9976;ERATE=0.0003;THETA=0.0002;AC=1759;AN=2184 GT:DS:GL:BD 0.80540293 1
1 227611588 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.955;LDAF=0.0321;AVGPOST=0.9974;RSQ=0.9715;ERATE=0.0003;THETA=0.0004;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 227611655 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6188;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227611832 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0084;AVGPOST=0.9992;RSQ=0.9592;ERATE=0.0002;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 227611923 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.2612;AVGPOST=0.9957;RSQ=0.9914;ERATE=0.0009;THETA=0.0001;AC=573;AN=2184 GT:DS:GL:BD 0.26236263 0
1 227611927 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.2586;AVGPOST=0.9984;RSQ=0.9968;ERATE=0.0002;THETA=0.0033;AC=567;AN=2184 GT:DS:GL:BD 0.25961539 0
1 227612230 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2441;AVGPOST=0.9975;RSQ=0.9947;ERATE=0.0005;THETA=0.0008;AC=531;AN=2184 GT:DS:GL:BD 0.24313186 0
1 227612231 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5095;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227612268 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7344;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227612356 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.964;LDAF=0.9607;AVGPOST=0.9970;RSQ=0.9695;ERATE=0.0003;THETA=0.0006;AC=2099;AN=2184 GT:DS:GL:BD 0.96108061 1
1 227612531 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.704;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.6042;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227612546 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0010;AVGPOST=0.9987;RSQ=0.5357;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227612740 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.8045;AVGPOST=0.9984;RSQ=0.9961;ERATE=0.0003;THETA=0.0003;AC=1757;AN=2184 GT:DS:GL:BD 0.80448717 1
1 227612744 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.957;LDAF=0.1511;AVGPOST=0.9824;RSQ=0.9530;ERATE=0.0040;THETA=0.0004;AC=326;AN=2184 GT:DS:GL:BD 0.14926741 0
1 227612745 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.983;LDAF=0.7990;AVGPOST=0.9923;RSQ=0.9822;ERATE=0.0009;THETA=0.0025;AC=1748;AN=2184 GT:DS:GL:BD 0.80036628 1
1 227612797 . GGAGTT G 86 PASS INDEL;BAVGPOST=0.999;BRSQ=0.700;LDAF=0.0087;AVGPOST=0.9937;RSQ=0.6956;ERATE=0.0009;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 227612869 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2421;AVGPOST=0.9993;RSQ=0.9984;ERATE=0.0003;THETA=0.0005;AC=528;AN=2184 GT:DS:GL:BD 0.24175824 0
1 227612930 . G GT 43 PASS INDEL;BAVGPOST=0.994;BRSQ=0.642;LDAF=0.0199;AVGPOST=0.9735;RSQ=0.4831;ERATE=0.0054;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 227612968 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.909;LDAF=0.0056;AVGPOST=0.9987;RSQ=0.9051;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227613064 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2420;AVGPOST=0.9959;RSQ=0.9914;ERATE=0.0009;THETA=0.0002;AC=528;AN=2184 GT:DS:GL:BD 0.24175824 0
1 227613110 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0044;AVGPOST=0.9947;RSQ=0.5842;ERATE=0.0006;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227613365 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227613479 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.5633;AVGPOST=0.9967;RSQ=0.9948;ERATE=0.0006;THETA=0.0002;AC=1230;AN=2184 GT:DS:GL:BD 0.56318682 1
1 227613489 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0002;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227613503 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.812;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7940;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227613510 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0846;AVGPOST=0.9996;RSQ=0.9977;ERATE=0.0003;THETA=0.0002;AC=185;AN=2184 GT:DS:GL:BD 0.08470696 0
1 227613594 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.897;LDAF=0.0136;AVGPOST=0.9976;RSQ=0.9289;ERATE=0.0005;THETA=0.0014;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 227613597 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.776;LDAF=0.0027;AVGPOST=0.9978;RSQ=0.6788;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227613606 . T TG 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0020;AVGPOST=0.9976;RSQ=0.4934;ERATE=0.0006;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227613813 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.773;LDAF=0.0018;AVGPOST=0.9976;RSQ=0.5171;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227613928 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7193;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227613953 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.787;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9771;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227614052 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.915;LDAF=0.0258;AVGPOST=0.9935;RSQ=0.9156;ERATE=0.0005;THETA=0.0003;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 227614104 . G GA 320 PASS INDEL;BAVGPOST=0.998;BRSQ=0.730;LDAF=0.0055;AVGPOST=0.9952;RSQ=0.6453;ERATE=0.0010;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227614107 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.8049;AVGPOST=0.9991;RSQ=0.9975;ERATE=0.0003;THETA=0.0002;AC=1758;AN=2184 GT:DS:GL:BD 0.80494505 1
1 227614158 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227614336 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.8044;AVGPOST=0.9892;RSQ=0.9745;ERATE=0.0030;THETA=0.0003;AC=1757;AN=2184 GT:DS:GL:BD 0.80448717 1
1 227614345 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6087;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227614459 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0042;AVGPOST=0.9990;RSQ=0.8983;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227614508 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.616;LDAF=0.0072;AVGPOST=0.9939;RSQ=0.6310;ERATE=0.0011;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227614600 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0123;AVGPOST=0.9895;RSQ=0.6826;ERATE=0.0006;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 227614723 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.592;LDAF=0.0042;AVGPOST=0.9973;RSQ=0.7073;ERATE=0.0007;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227614748 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.920;BRSQ=0.845;LDAF=0.4156;AVGPOST=0.8371;RSQ=0.7297;ERATE=0.0326;THETA=0.0003;AC=890;AN=2184 GT:DS:GL:BD 0.40750915 0
1 227614888 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.899;LDAF=0.0186;AVGPOST=0.9864;RSQ=0.7311;ERATE=0.0011;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 227615057 . A AC 24 PASS INDEL;BAVGPOST=0.999;BRSQ=0.626;LDAF=0.0053;AVGPOST=0.9953;RSQ=0.6406;ERATE=0.0009;THETA=0.0031;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227615067 . CTAAA C 154 PASS INDEL;BAVGPOST=1.000;BRSQ=0.737;LDAF=0.0021;AVGPOST=0.9983;RSQ=0.6399;ERATE=0.0006;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227615154 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.4083;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227615303 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.802;LDAF=0.0034;AVGPOST=0.9978;RSQ=0.7902;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227615353 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0069;AVGPOST=0.9997;RSQ=0.9807;ERATE=0.0003;THETA=0.0001;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 227615453 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7682;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227615570 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0833;AVGPOST=0.9990;RSQ=0.9951;ERATE=0.0002;THETA=0.0002;AC=182;AN=2184 GT:DS:GL:BD 0.08333334 0
1 227615589 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0056;AVGPOST=0.9993;RSQ=0.9445;ERATE=0.0004;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227615884 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0002;THETA=0.0001;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227615892 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227616071 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9514;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227616083 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1983;AVGPOST=0.9972;RSQ=0.9934;ERATE=0.0006;THETA=0.0006;AC=431;AN=2184 GT:DS:GL:BD 0.19734432 0
1 227616160 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.6841;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227616259 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9998;RSQ=0.9890;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 227616266 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0071;AVGPOST=0.9980;RSQ=0.8852;ERATE=0.0003;THETA=0.0001;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 227616375 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227616383 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0064;AVGPOST=0.9991;RSQ=0.9396;ERATE=0.0003;THETA=0.0028;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227616437 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6164;ERATE=0.0004;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227616522 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8479;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227616677 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5321;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227616839 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0053;AVGPOST=0.9990;RSQ=0.9272;ERATE=0.0002;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227617144 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.539;LDAF=0.0029;AVGPOST=0.9975;RSQ=0.6963;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227617145 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0030;AVGPOST=0.9977;RSQ=0.7294;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227617250 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7457;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227617390 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.6506;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227617487 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5441;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227617519 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.1495;AVGPOST=0.9971;RSQ=0.9907;ERATE=0.0006;THETA=0.0010;AC=325;AN=2184 GT:DS:GL:BD 0.14880952 0
1 227617530 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8091;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227617569 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227617656 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0061;AVGPOST=0.9992;RSQ=0.9505;ERATE=0.0002;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227617699 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8050;AVGPOST=0.9982;RSQ=0.9957;ERATE=0.0004;THETA=0.0003;AC=1759;AN=2184 GT:DS:GL:BD 0.80540293 1
1 227617735 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0036;AVGPOST=0.9996;RSQ=0.9528;ERATE=0.0002;THETA=0.0001;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227617761 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5690;AVGPOST=0.9971;RSQ=0.9954;ERATE=0.0004;THETA=0.0005;AC=1246;AN=2184 GT:DS:GL:BD 0.57051283 1
1 227617811 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7595;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227617986 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8316;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227618066 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0002;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227618079 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227618146 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.995;LDAF=0.6016;AVGPOST=0.9951;RSQ=0.9922;ERATE=0.0062;THETA=0.0006;AC=1314;AN=2184 GT:DS:GL:BD 0.60164833 1
1 227618176 . CAG C 6608 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0375;AVGPOST=0.9975;RSQ=0.9741;ERATE=0.0003;THETA=0.0007;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 227618209 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9359;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227618248 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0112;AVGPOST=0.9994;RSQ=0.9775;ERATE=0.0002;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 227618266 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.737;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.8401;ERATE=0.0002;THETA=0.0049;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227618297 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0027;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0008;THETA=0.0033;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227618397 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227618420 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1681;AVGPOST=0.9995;RSQ=0.9986;ERATE=0.0035;THETA=0.0003;AC=368;AN=2184 GT:DS:GL:BD 0.16849817 0
1 227618550 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.7602;AVGPOST=0.9989;RSQ=0.9976;ERATE=0.0003;THETA=0.0041;AC=1660;AN=2184 GT:DS:GL:BD 0.76007324 1
1 227618592 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6172;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227618593 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227618683 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1936;AVGPOST=0.9988;RSQ=0.9969;ERATE=0.0002;THETA=0.0052;AC=422;AN=2184 GT:DS:GL:BD 0.19322345 0
1 227618777 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0008;AVGPOST=0.9998;RSQ=0.8876;ERATE=0.0002;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227618836 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0419;AVGPOST=0.9986;RSQ=0.9877;ERATE=0.0003;THETA=0.0003;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 227618901 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0038;AVGPOST=0.9992;RSQ=0.9173;ERATE=0.0003;THETA=0.0019;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227618915 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2286;AVGPOST=0.9979;RSQ=0.9954;ERATE=0.0004;THETA=0.0003;AC=500;AN=2184 GT:DS:GL:BD 0.22893773 0
1 227618916 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7128;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227618949 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8388;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227618962 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.950;LDAF=0.0295;AVGPOST=0.9975;RSQ=0.9700;ERATE=0.0003;THETA=0.0003;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 227618975 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.705;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6268;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227619014 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.821;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7708;ERATE=0.0003;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227619022 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0058;AVGPOST=0.9984;RSQ=0.9062;ERATE=0.0002;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227619145 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0068;AVGPOST=0.9992;RSQ=0.9524;ERATE=0.0004;THETA=0.0011;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 227619193 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227619244 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0107;AVGPOST=0.9995;RSQ=0.9754;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 227619268 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6226;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227619317 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0093;AVGPOST=0.9987;RSQ=0.9463;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 227619326 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6419;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227619332 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3262;AVGPOST=0.9968;RSQ=0.9941;ERATE=0.0004;THETA=0.0004;AC=713;AN=2184 GT:DS:GL:BD 0.32646519 0
1 227619456 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.756;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4203;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227619480 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0069;AVGPOST=0.9985;RSQ=0.9099;ERATE=0.0003;THETA=0.0020;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 227619627 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.832;LDAF=0.0026;AVGPOST=0.9973;RSQ=0.6222;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227619651 . GA G 735 PASS INDEL;BAVGPOST=0.997;BRSQ=0.873;LDAF=0.0094;AVGPOST=0.9979;RSQ=0.9193;ERATE=0.0003;THETA=0.0021;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 227619695 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5116;ERATE=0.0003;THETA=0.0043;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227619774 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.973;LDAF=0.1497;AVGPOST=0.9941;RSQ=0.9819;ERATE=0.0006;THETA=0.0007;AC=328;AN=2184 GT:DS:GL:BD 0.15018316 0
1 227619804 . C CAA 340 PASS INDEL;BAVGPOST=0.987;BRSQ=0.560;LDAF=0.0198;AVGPOST=0.9803;RSQ=0.5883;ERATE=0.0015;THETA=0.0008;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 227619806 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.896;LDAF=0.0118;AVGPOST=0.9950;RSQ=0.8315;ERATE=0.0005;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 227619847 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.856;LDAF=0.0067;AVGPOST=0.9975;RSQ=0.8651;ERATE=0.0003;THETA=0.0050;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227619950 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0143;AVGPOST=0.9996;RSQ=0.9886;ERATE=0.0002;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 227619983 . AAT A 694 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0042;AVGPOST=0.9980;RSQ=0.7883;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227619990 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=0.9992;RSQ=0.9122;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227619997 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0045;AVGPOST=0.9992;RSQ=0.9241;ERATE=0.0004;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227620035 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4274;ERATE=0.0004;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227620127 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.994;LDAF=0.5061;AVGPOST=0.9926;RSQ=0.9890;ERATE=0.0005;THETA=0.0037;AC=1103;AN=2184 GT:DS:GL:BD 0.50503665 1
1 227620264 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6839;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227620401 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6710;ERATE=0.0002;THETA=0.0064;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227620412 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9997;RSQ=0.9650;ERATE=0.0003;THETA=0.0022;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227620515 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.983;LDAF=0.4365;AVGPOST=0.9875;RSQ=0.9813;ERATE=0.0007;THETA=0.0003;AC=955;AN=2184 GT:DS:GL:BD 0.43727106 0
1 227620545 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5076;ERATE=0.0002;THETA=0.0043;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227620574 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0030;AVGPOST=0.9992;RSQ=0.8793;ERATE=0.0002;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227620602 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.951;LDAF=0.6217;AVGPOST=0.9670;RSQ=0.9487;ERATE=0.0078;THETA=0.0006;AC=1359;AN=2184 GT:DS:GL:BD 0.62225276 1
1 227620621 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.707;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5869;ERATE=0.0004;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227620628 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.960;BRSQ=0.926;LDAF=0.6438;AVGPOST=0.9341;RSQ=0.8975;ERATE=0.0195;THETA=0.0020;AC=1420;AN=2184 GT:DS:GL:BD 0.65018314 1
1 227620649 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.926;LDAF=0.2244;AVGPOST=0.9537;RSQ=0.9043;ERATE=0.0112;THETA=0.0090;AC=469;AN=2184 GT:DS:GL:BD 0.21474358 0
1 227620729 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.983;LDAF=0.1269;AVGPOST=0.9968;RSQ=0.9892;ERATE=0.0010;THETA=0.0077;AC=277;AN=2184 GT:DS:GL:BD 0.12683150 0
1 227620760 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0041;AVGPOST=0.9991;RSQ=0.9446;ERATE=0.0002;THETA=0.0075;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227620831 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.833;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9278;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227620891 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4011;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227621004 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0094;AVGPOST=0.9985;RSQ=0.9369;ERATE=0.0002;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 227621024 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0148;AVGPOST=0.9975;RSQ=0.9266;ERATE=0.0003;THETA=0.0015;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 227621025 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.1379;AVGPOST=0.9977;RSQ=0.9924;ERATE=0.0003;THETA=0.0020;AC=301;AN=2184 GT:DS:GL:BD 0.13782051 0
1 227621090 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.986;LDAF=0.0748;AVGPOST=0.9991;RSQ=0.9955;ERATE=0.0003;THETA=0.0016;AC=163;AN=2184 GT:DS:GL:BD 0.07463370 0
1 227621170 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9266;ERATE=0.0003;THETA=0.0032;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227621223 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1940;AVGPOST=0.9986;RSQ=0.9965;ERATE=0.0003;THETA=0.0003;AC=423;AN=2184 GT:DS:GL:BD 0.19368131 0
1 227621367 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.9012;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227621476 . A AAGGGG 6131 PASS INDEL;BAVGPOST=0.980;BRSQ=0.884;LDAF=0.0989;AVGPOST=0.9813;RSQ=0.9294;ERATE=0.0006;THETA=0.0005;AC=216;AN=2184 GT:DS:GL:BD 0.09890110 0
1 227621484 rs56044228 G GGGAGA 18214 PASS INDEL;BAVGPOST=0.979;BRSQ=0.888;LDAF=0.0994;AVGPOST=0.9811;RSQ=0.9294;ERATE=0.0005;THETA=0.0002;AC=217;AN=2184 GT:DS:GL:BD 0.09935898 0
1 227621489 . A AGGAGC 10914 PASS INDEL;BAVGPOST=0.979;BRSQ=0.887;LDAF=0.0951;AVGPOST=0.9820;RSQ=0.9285;ERATE=0.0006;THETA=0.0002;AC=207;AN=2184 GT:DS:GL:BD 0.09478022 0
1 227621504 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.957;LDAF=0.4076;AVGPOST=0.9650;RSQ=0.9444;ERATE=0.0090;THETA=0.0002;AC=893;AN=2184 GT:DS:GL:BD 0.40888280 0
1 227621578 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.825;LDAF=0.0082;AVGPOST=0.9973;RSQ=0.8731;ERATE=0.0002;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227621580 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.963;LDAF=0.0611;AVGPOST=0.9946;RSQ=0.9651;ERATE=0.0011;THETA=0.0002;AC=133;AN=2184 GT:DS:GL:BD 0.06089744 0
1 227621590 . CAG C 15117 PASS INDEL;BAVGPOST=0.993;BRSQ=0.294;LDAF=0.9727;AVGPOST=0.9673;RSQ=0.5264;ERATE=0.0021;THETA=0.0045;AC=2136;AN=2184 GT:DS:GL:BD 0.97802198 1
1 227621639 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0002;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 227621701 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8619;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227621725 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9156;AVGPOST=0.9994;RSQ=0.9963;ERATE=0.0003;THETA=0.0003;AC=2000;AN=2184 GT:DS:GL:BD 0.91575092 1
1 227621935 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1370;AVGPOST=0.9996;RSQ=0.9989;ERATE=0.0002;THETA=0.0003;AC=300;AN=2184 GT:DS:GL:BD 0.13736264 0
1 227622011 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4283;AVGPOST=0.9998;RSQ=0.9997;ERATE=0.0002;THETA=0.0003;AC=934;AN=2184 GT:DS:GL:BD 0.42765567 0
1 227622169 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9988;RSQ=0.8808;ERATE=0.0002;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227622222 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.5810;AVGPOST=0.9962;RSQ=0.9938;ERATE=0.0006;THETA=0.0003;AC=1269;AN=2184 GT:DS:GL:BD 0.58104396 1
1 227622360 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0038;AVGPOST=0.9995;RSQ=0.9430;ERATE=0.0003;THETA=0.0001;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227622364 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4311;AVGPOST=0.9979;RSQ=0.9966;ERATE=0.0003;THETA=0.0001;AC=941;AN=2184 GT:DS:GL:BD 0.43086082 0
1 227622403 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0018;AVGPOST=0.9980;RSQ=0.5295;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227622560 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227622635 . A AG 6 PASS INDEL;BAVGPOST=0.999;BRSQ=0.511;LDAF=0.0029;AVGPOST=0.9979;RSQ=0.7083;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227622701 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.789;LDAF=0.0049;AVGPOST=0.9973;RSQ=0.7832;ERATE=0.0006;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227622944 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1380;AVGPOST=1.0000;RSQ=0.9998;ERATE=0.0002;THETA=0.0002;AC=302;AN=2184 GT:DS:GL:BD 0.13827839 0
1 227623016 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.851;LDAF=0.0039;AVGPOST=0.9984;RSQ=0.8576;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227623177 . AG A 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5285;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227623449 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227623477 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5452;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227623493 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5617;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227623509 . A AT 160 PASS INDEL;BAVGPOST=0.977;BRSQ=0.540;LDAF=0.0520;AVGPOST=0.9398;RSQ=0.5226;ERATE=0.0108;THETA=0.0019;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 227623525 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6547;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227623533 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0026;AVGPOST=0.9983;RSQ=0.7173;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227623559 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0085;AVGPOST=0.9952;RSQ=0.7747;ERATE=0.0007;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 227623720 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0017;AVGPOST=0.9978;RSQ=0.4563;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227623721 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.6819;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227623807 . A AAG 27 PASS INDEL;BAVGPOST=0.998;BRSQ=0.768;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5134;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227623810 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0198;AVGPOST=0.9993;RSQ=0.9828;ERATE=0.0003;THETA=0.0006;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 227623853 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1374;AVGPOST=0.9989;RSQ=0.9960;ERATE=0.0004;THETA=0.0008;AC=300;AN=2184 GT:DS:GL:BD 0.13736264 0
1 227623867 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.9146;AVGPOST=0.9973;RSQ=0.9854;ERATE=0.0005;THETA=0.0002;AC=1998;AN=2184 GT:DS:GL:BD 0.91483516 1
1 227623964 . TG T 119 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0047;AVGPOST=0.9970;RSQ=0.7422;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227624044 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0050;AVGPOST=0.9992;RSQ=0.9254;ERATE=0.0003;THETA=0.0012;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227624046 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0077;AVGPOST=0.9999;RSQ=0.9918;ERATE=0.0002;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227624240 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0041;AVGPOST=0.9991;RSQ=0.9312;ERATE=0.0002;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227624312 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4261;AVGPOST=0.9988;RSQ=0.9980;ERATE=0.0003;THETA=0.0032;AC=929;AN=2184 GT:DS:GL:BD 0.42536631 0
1 227624484 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.746;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.5559;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227624528 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2673;AVGPOST=0.9964;RSQ=0.9939;ERATE=0.0003;THETA=0.0002;AC=581;AN=2184 GT:DS:GL:BD 0.26602563 0
1 227624541 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.7635;AVGPOST=0.9937;RSQ=0.9884;ERATE=0.0004;THETA=0.0005;AC=1668;AN=2184 GT:DS:GL:BD 0.76373625 1
1 227624921 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6395;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227625073 . AG A 31 PASS INDEL;BAVGPOST=0.995;BRSQ=0.584;LDAF=0.0112;AVGPOST=0.9894;RSQ=0.6064;ERATE=0.0016;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227625074 . GAAGAAAGAA G 1356 PASS INDEL;BAVGPOST=0.989;BRSQ=0.782;LDAF=0.0265;AVGPOST=0.9905;RSQ=0.8634;ERATE=0.0008;THETA=0.0008;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 227625147 . GGAAA G 6775 PASS INDEL;BAVGPOST=0.852;BRSQ=0.661;LDAF=0.2665;AVGPOST=0.8230;RSQ=0.6493;ERATE=0.0201;THETA=0.0001;AC=514;AN=2184 GT:DS:GL:BD 0.23534799 0
1 227625160 rs77465613 GAA G 16961 PASS INDEL;BAVGPOST=0.885;BRSQ=0.787;LDAF=0.3405;AVGPOST=0.8760;RSQ=0.7942;ERATE=0.0151;THETA=0.0003;AC=734;AN=2184 GT:DS:GL:BD 0.33608058 0
1 227625162 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.858;BRSQ=0.710;LDAF=0.3580;AVGPOST=0.8099;RSQ=0.6595;ERATE=0.0661;THETA=0.0005;AC=736;AN=2184 GT:DS:GL:BD 0.33699635 0
1 227625162 rs77465613 AAG A 44341 PASS INDEL;BAVGPOST=0.997;BRSQ=0.406;LDAF=0.9944;AVGPOST=0.9922;RSQ=0.4169;ERATE=0.0010;THETA=0.0002;AC=2177;AN=2184 GT:DS:GL:BD 0.99679488 1
1 227625174 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.471;LDAF=0.0454;AVGPOST=0.9427;RSQ=0.4857;ERATE=0.0087;THETA=0.0024;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 227625188 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.763;LDAF=0.0756;AVGPOST=0.9640;RSQ=0.8120;ERATE=0.0041;THETA=0.0011;AC=148;AN=2184 GT:DS:GL:BD 0.06776557 0
1 227625192 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.660;LDAF=0.0505;AVGPOST=0.9804;RSQ=0.8440;ERATE=0.0006;THETA=0.0012;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 227625212 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.879;BRSQ=0.692;LDAF=0.2906;AVGPOST=0.8252;RSQ=0.6334;ERATE=0.0604;THETA=0.0003;AC=540;AN=2184 GT:DS:GL:BD 0.24725275 0
1 227625231 . AAAG A 11706 PASS INDEL;BAVGPOST=0.936;BRSQ=0.840;LDAF=0.2412;AVGPOST=0.9557;RSQ=0.9092;ERATE=0.0014;THETA=0.0004;AC=532;AN=2184 GT:DS:GL:BD 0.24358974 0
1 227625419 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1388;AVGPOST=0.9980;RSQ=0.9940;ERATE=0.0003;THETA=0.0003;AC=302;AN=2184 GT:DS:GL:BD 0.13827839 0
1 227625440 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227625546 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0025;AVGPOST=0.9984;RSQ=0.7376;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227625597 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0638;AVGPOST=0.9995;RSQ=0.9960;ERATE=0.0003;THETA=0.0002;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 227625647 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.8005;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227625682 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5623;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227625704 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0087;AVGPOST=0.9987;RSQ=0.9366;ERATE=0.0003;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 227625800 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.6745;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227625804 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0087;AVGPOST=0.9991;RSQ=0.9580;ERATE=0.0003;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 227625991 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.2879;AVGPOST=0.9975;RSQ=0.9946;ERATE=0.0005;THETA=0.0004;AC=626;AN=2184 GT:DS:GL:BD 0.28663003 0
1 227626037 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5888;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227626039 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5844;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227626063 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227626184 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4776;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227626203 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9721;ERATE=0.0003;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227626224 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6569;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227626270 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5179;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227626309 . GC G 290 PASS INDEL;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8810;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227626402 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0636;AVGPOST=0.9997;RSQ=0.9978;ERATE=0.0003;THETA=0.0007;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 227626428 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4808;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227626568 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7951;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227626601 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.7310;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227626638 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0039;AVGPOST=0.9996;RSQ=0.9556;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227626662 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1377;AVGPOST=0.9989;RSQ=0.9962;ERATE=0.0003;THETA=0.0012;AC=301;AN=2184 GT:DS:GL:BD 0.13782051 0
1 227626918 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.708;LDAF=0.0041;AVGPOST=0.9982;RSQ=0.8266;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227626925 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9103;ERATE=0.0003;THETA=0.0037;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227626977 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8323;ERATE=0.0003;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227627141 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7292;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227627180 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0037;AVGPOST=1.0000;RSQ=0.9941;ERATE=0.0002;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227627200 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.7335;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227627201 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.714;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7467;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227627203 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0046;AVGPOST=0.9981;RSQ=0.8732;ERATE=0.0002;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227627291 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8104;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227627314 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0049;AVGPOST=0.9970;RSQ=0.7749;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227627379 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5826;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227627427 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8320;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227627508 . T TC 37 PASS INDEL;BAVGPOST=1.000;BRSQ=0.707;LDAF=0.0021;AVGPOST=0.9968;RSQ=0.3097;ERATE=0.0007;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227627663 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4247;AVGPOST=0.9974;RSQ=0.9957;ERATE=0.0005;THETA=0.0003;AC=925;AN=2184 GT:DS:GL:BD 0.42353481 0
1 227627692 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6288;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227627708 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8446;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227627734 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227628069 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6710;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227628092 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6200;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227628170 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7526;ERATE=0.0008;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227628343 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0020;AVGPOST=0.9994;RSQ=0.8669;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227628385 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.883;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9107;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227628390 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6723;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227628560 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5613;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227628624 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0170;AVGPOST=0.9994;RSQ=0.9834;ERATE=0.0002;THETA=0.0006;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 227628648 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8256;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227628695 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=1.0000;RSQ=0.9966;ERATE=0.0002;THETA=0.0020;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 227629136 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.7986;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227629162 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.674;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.6051;ERATE=0.0003;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227629453 . A AT 79 PASS INDEL;BAVGPOST=0.939;BRSQ=0.174;LDAF=0.1465;AVGPOST=0.8125;RSQ=0.4248;ERATE=0.0162;THETA=0.0004;AC=210;AN=2184 GT:DS:GL:BD 0.09615385 0
1 227629457 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.704;LDAF=0.0082;AVGPOST=0.9972;RSQ=0.8612;ERATE=0.0005;THETA=0.0008;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 227629461 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.516;LDAF=0.0157;AVGPOST=0.9828;RSQ=0.5808;ERATE=0.0013;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 227629461 . GAT G 6519 PASS INDEL;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1411;AVGPOST=0.9952;RSQ=0.9845;ERATE=0.0007;THETA=0.0002;AC=306;AN=2184 GT:DS:GL:BD 0.14010990 0
1 227629505 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6082;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227629532 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5706;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227629576 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.978;LDAF=0.1441;AVGPOST=0.9964;RSQ=0.9886;ERATE=0.0003;THETA=0.0002;AC=313;AN=2184 GT:DS:GL:BD 0.14331502 0
1 227629610 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0023;AVGPOST=0.9974;RSQ=0.5580;ERATE=0.0006;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227629788 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.819;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7675;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227629855 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1377;AVGPOST=0.9991;RSQ=0.9970;ERATE=0.0003;THETA=0.0009;AC=302;AN=2184 GT:DS:GL:BD 0.13827839 0
1 227629915 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.886;LDAF=0.0107;AVGPOST=0.9989;RSQ=0.9509;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 227629950 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0024;AVGPOST=0.9976;RSQ=0.6329;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227630022 . T TA 614 PASS INDEL;BAVGPOST=0.955;BRSQ=0.533;LDAF=0.0806;AVGPOST=0.9097;RSQ=0.4992;ERATE=0.0229;THETA=0.0008;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 227630312 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.927;LDAF=0.0098;AVGPOST=0.9967;RSQ=0.8873;ERATE=0.0003;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 227630349 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6746;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227630427 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0025;AVGPOST=0.9984;RSQ=0.7605;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227630470 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0019;AVGPOST=0.9996;RSQ=0.9002;ERATE=0.0002;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227630485 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0042;AVGPOST=0.9988;RSQ=0.8863;ERATE=0.0002;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227630548 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8725;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227630780 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8118;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227630810 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0023;AVGPOST=0.9969;RSQ=0.5022;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227630833 . A AC 11789 PASS INDEL;BAVGPOST=0.995;BRSQ=0.980;LDAF=0.1250;AVGPOST=0.9929;RSQ=0.9760;ERATE=0.0003;THETA=0.0002;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 227630835 . C CA 820 PASS INDEL;BAVGPOST=0.985;BRSQ=0.938;LDAF=0.1248;AVGPOST=0.9918;RSQ=0.9708;ERATE=0.0002;THETA=0.0004;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 227630987 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6866;AVGPOST=0.9987;RSQ=0.9974;ERATE=0.0004;THETA=0.0002;AC=1500;AN=2184 GT:DS:GL:BD 0.68681318 1
1 227631046 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.948;LDAF=0.0174;AVGPOST=0.9983;RSQ=0.9616;ERATE=0.0003;THETA=0.0002;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 227631137 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7063;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227631205 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7618;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227631356 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7089;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227631357 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0636;AVGPOST=0.9998;RSQ=0.9982;ERATE=0.0002;THETA=0.0003;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 227631369 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5733;AVGPOST=0.9980;RSQ=0.9964;ERATE=0.0003;THETA=0.0002;AC=1254;AN=2184 GT:DS:GL:BD 0.57417583 1
1 227631406 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1431;AVGPOST=0.9998;RSQ=0.9992;ERATE=0.0002;THETA=0.0003;AC=312;AN=2184 GT:DS:GL:BD 0.14285715 0
1 227631612 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227631626 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8136;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227631651 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227631698 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9737;AVGPOST=0.9995;RSQ=0.9939;ERATE=0.0002;THETA=0.0004;AC=2127;AN=2184 GT:DS:GL:BD 0.97390109 1
1 227631794 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7051;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227631823 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1428;AVGPOST=0.9988;RSQ=0.9957;ERATE=0.0004;THETA=0.0002;AC=312;AN=2184 GT:DS:GL:BD 0.14285715 0
1 227631843 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227631872 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0030;AVGPOST=0.9989;RSQ=0.8597;ERATE=0.0002;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227631921 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6455;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227631938 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0039;AVGPOST=0.9996;RSQ=0.9550;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227631963 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227632031 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0026;AVGPOST=0.9969;RSQ=0.6006;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227632036 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6256;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227632125 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6870;AVGPOST=0.9996;RSQ=0.9992;ERATE=0.0002;THETA=0.0002;AC=1500;AN=2184 GT:DS:GL:BD 0.68681318 1
1 227632222 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.829;LDAF=0.0038;AVGPOST=0.9990;RSQ=0.9010;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227632237 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0022;AVGPOST=0.9997;RSQ=0.9415;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227632239 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7452;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227632298 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0065;AVGPOST=0.9999;RSQ=0.9898;ERATE=0.0002;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 227632334 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.6923;AVGPOST=0.9986;RSQ=0.9971;ERATE=0.0003;THETA=0.0007;AC=1512;AN=2184 GT:DS:GL:BD 0.69230771 1
1 227632335 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1404;AVGPOST=0.9948;RSQ=0.9849;ERATE=0.0007;THETA=0.0004;AC=308;AN=2184 GT:DS:GL:BD 0.14102565 0
1 227632460 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.936;LDAF=0.0111;AVGPOST=0.9998;RSQ=0.9900;ERATE=0.0002;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 227632473 . G GA 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227632712 . GA G 71 PASS INDEL;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6122;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227632868 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6072;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227632991 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8410;ERATE=0.0002;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227633006 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0635;AVGPOST=0.9995;RSQ=0.9965;ERATE=0.0003;THETA=0.0003;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 227633007 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8664;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227633231 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0030;AVGPOST=0.9991;RSQ=0.8959;ERATE=0.0002;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227633362 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0025;AVGPOST=0.9994;RSQ=0.8772;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227633437 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227633544 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0081;AVGPOST=0.9990;RSQ=0.9552;ERATE=0.0003;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 227633585 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6948;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227633589 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.5490;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227633807 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6927;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227634040 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0025;AVGPOST=0.9994;RSQ=0.9219;ERATE=0.0002;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227634107 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.893;LDAF=0.0085;AVGPOST=0.9970;RSQ=0.8824;ERATE=0.0006;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227634553 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227634581 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1431;AVGPOST=0.9990;RSQ=0.9965;ERATE=0.0002;THETA=0.0005;AC=312;AN=2184 GT:DS:GL:BD 0.14285715 0
1 227634718 . A AC 9 PASS INDEL;BAVGPOST=0.997;BRSQ=0.555;LDAF=0.0086;AVGPOST=0.9903;RSQ=0.5701;ERATE=0.0019;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227634898 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227635025 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0042;AVGPOST=0.9990;RSQ=0.9110;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227635081 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0046;AVGPOST=0.9979;RSQ=0.7964;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227635090 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8894;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227635141 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.746;LDAF=0.0020;AVGPOST=0.9986;RSQ=0.7233;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227635162 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2884;AVGPOST=0.9984;RSQ=0.9967;ERATE=0.0006;THETA=0.0004;AC=630;AN=2184 GT:DS:GL:BD 0.28846154 0
1 227635165 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0037;AVGPOST=0.9997;RSQ=0.9656;ERATE=0.0003;THETA=0.0018;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227635271 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0733;AVGPOST=0.9936;RSQ=0.9650;ERATE=0.0005;THETA=0.0004;AC=158;AN=2184 GT:DS:GL:BD 0.07234433 0
1 227635314 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.681;LDAF=0.0055;AVGPOST=0.9935;RSQ=0.5358;ERATE=0.0005;THETA=0.0031;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227635420 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0074;AVGPOST=0.9979;RSQ=0.9152;ERATE=0.0003;THETA=0.0013;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 227635520 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.763;LDAF=0.0030;AVGPOST=0.9988;RSQ=0.8506;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227635589 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0082;AVGPOST=0.9989;RSQ=0.9463;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227635598 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0738;AVGPOST=0.9988;RSQ=0.9934;ERATE=0.0002;THETA=0.0026;AC=161;AN=2184 GT:DS:GL:BD 0.07371795 0
1 227635739 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1148;AVGPOST=0.9965;RSQ=0.9862;ERATE=0.0006;THETA=0.0004;AC=249;AN=2184 GT:DS:GL:BD 0.11401099 0
1 227635880 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8889;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227635990 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9521;ERATE=0.0002;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227636021 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9891;AVGPOST=0.9993;RSQ=0.9741;ERATE=0.0003;THETA=0.0004;AC=2161;AN=2184 GT:DS:GL:BD 0.98946887 1
1 227636066 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1321;AVGPOST=0.9999;RSQ=0.9996;ERATE=0.0002;THETA=0.0005;AC=288;AN=2184 GT:DS:GL:BD 0.13186814 0
1 227636079 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0233;AVGPOST=0.9999;RSQ=0.9973;ERATE=0.0002;THETA=0.0003;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 227636167 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7566;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227636201 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0057;AVGPOST=0.9988;RSQ=0.9331;ERATE=0.0002;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227636303 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0019;AVGPOST=0.9991;RSQ=0.8093;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227636329 . AT A 37 PASS INDEL;BAVGPOST=0.999;BRSQ=0.788;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6633;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227636367 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6861;AVGPOST=0.9985;RSQ=0.9974;ERATE=0.0003;THETA=0.0003;AC=1498;AN=2184 GT:DS:GL:BD 0.68589741 1
1 227636551 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7891;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227636820 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9747;ERATE=0.0002;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227636862 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0116;AVGPOST=0.9995;RSQ=0.9826;ERATE=0.0003;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227636998 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9279;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227637068 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1496;AVGPOST=0.9986;RSQ=0.9954;ERATE=0.0003;THETA=0.0004;AC=326;AN=2184 GT:DS:GL:BD 0.14926741 0
1 227637092 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6847;AVGPOST=0.9979;RSQ=0.9965;ERATE=0.0004;THETA=0.0003;AC=1495;AN=2184 GT:DS:GL:BD 0.68452382 1
1 227637159 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.6973;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227637303 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0021;AVGPOST=0.9989;RSQ=0.7691;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227637441 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.696;LDAF=0.0046;AVGPOST=0.9926;RSQ=0.3854;ERATE=0.0012;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227637577 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0054;AVGPOST=0.9973;RSQ=0.8206;ERATE=0.0005;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227637696 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0026;AVGPOST=0.9992;RSQ=0.8658;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227637700 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8577;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227637782 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1443;AVGPOST=0.9981;RSQ=0.9938;ERATE=0.0003;THETA=0.0003;AC=314;AN=2184 GT:DS:GL:BD 0.14377290 0
1 227637871 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8646;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227637881 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9623;ERATE=0.0002;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227637962 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6380;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227638003 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.7033;ERATE=0.0002;THETA=0.0018;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227638073 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7132;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227638110 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1413;AVGPOST=0.9995;RSQ=0.9982;ERATE=0.0003;THETA=0.0003;AC=309;AN=2184 GT:DS:GL:BD 0.14148352 0
1 227638171 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227638174 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6329;ERATE=0.0002;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227638222 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.9637;AVGPOST=0.9995;RSQ=0.9939;ERATE=0.0003;THETA=0.0001;AC=2105;AN=2184 GT:DS:GL:BD 0.96382785 1
1 227638361 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0178;AVGPOST=0.9994;RSQ=0.9866;ERATE=0.0003;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 227638481 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.799;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7355;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227638561 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0054;AVGPOST=0.9998;RSQ=0.9823;ERATE=0.0002;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227638758 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5723;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227638830 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0055;AVGPOST=0.9988;RSQ=0.9161;ERATE=0.0003;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227638840 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0179;AVGPOST=0.9999;RSQ=0.9962;ERATE=0.0002;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 227638980 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227639017 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0045;AVGPOST=0.9993;RSQ=0.9465;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227639054 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0613;AVGPOST=0.9999;RSQ=0.9993;ERATE=0.0002;THETA=0.0010;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 227639151 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6703;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227639176 . T TG 90 PASS INDEL;BAVGPOST=0.999;BRSQ=0.661;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6154;ERATE=0.0004;THETA=0.0022;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227639268 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227639274 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0095;AVGPOST=0.9992;RSQ=0.9627;ERATE=0.0003;THETA=0.0015;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 227639439 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6880;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227639486 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0078;AVGPOST=0.9989;RSQ=0.9441;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227639604 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.776;LDAF=0.0032;AVGPOST=0.9989;RSQ=0.8555;ERATE=0.0003;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227639629 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0037;AVGPOST=0.9995;RSQ=0.9409;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227639634 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.6208;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227639639 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0002;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227639831 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9643;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227639843 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227640003 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.806;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8756;ERATE=0.0002;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227640111 . C CCT 745 PASS INDEL;BAVGPOST=0.928;BRSQ=0.460;LDAF=0.1201;AVGPOST=0.8754;RSQ=0.5407;ERATE=0.0180;THETA=0.0011;AC=195;AN=2184 GT:DS:GL:BD 0.08928572 0
1 227640117 . C CCT 18355 PASS INDEL;BAVGPOST=0.749;BRSQ=0.417;LDAF=0.6255;AVGPOST=0.7588;RSQ=0.4974;ERATE=0.1032;THETA=0.0003;AC=1469;AN=2184 GT:DS:GL:BD 0.67261904 1
1 227640138 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.751;LDAF=0.0027;AVGPOST=0.9973;RSQ=0.6217;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227640256 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9452;ERATE=0.0003;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227640379 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0127;AVGPOST=0.9979;RSQ=0.9413;ERATE=0.0003;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 227640412 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0042;AVGPOST=0.9997;RSQ=0.9684;ERATE=0.0003;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227640537 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0048;AVGPOST=0.9971;RSQ=0.7814;ERATE=0.0002;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227640717 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0060;AVGPOST=0.9982;RSQ=0.8723;ERATE=0.0006;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 227640748 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6968;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227640776 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0041;AVGPOST=0.9994;RSQ=0.9405;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227640790 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.8961;ERATE=0.0004;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227641252 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0062;AVGPOST=0.9984;RSQ=0.9069;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 227641404 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.8125;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227641414 . A ATG 27834 PASS INDEL;BAVGPOST=0.773;BRSQ=0.543;LDAF=0.5569;AVGPOST=0.7677;RSQ=0.5580;ERATE=0.1178;THETA=0.0002;AC=1247;AN=2184 GT:DS:GL:BD 0.57097071 1
1 227641478 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.5005;AVGPOST=0.9954;RSQ=0.9921;ERATE=0.0005;THETA=0.0005;AC=1094;AN=2184 GT:DS:GL:BD 0.50091577 1
1 227641531 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.801;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.7706;ERATE=0.0003;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227641556 . CTG C 8997 PASS INDEL;BAVGPOST=0.993;BRSQ=0.973;LDAF=0.1410;AVGPOST=0.9948;RSQ=0.9828;ERATE=0.0006;THETA=0.0007;AC=308;AN=2184 GT:DS:GL:BD 0.14102565 0
1 227641569 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9892;AVGPOST=0.9994;RSQ=0.9755;ERATE=0.0003;THETA=0.0004;AC=2161;AN=2184 GT:DS:GL:BD 0.98946887 1
1 227641577 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0036;AVGPOST=0.9991;RSQ=0.8961;ERATE=0.0003;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227641603 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7367;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227641678 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6934;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227641718 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227641803 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0354;AVGPOST=0.9974;RSQ=0.9707;ERATE=0.0003;THETA=0.0004;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 227641812 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6107;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227641904 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9804;ERATE=0.0002;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227641919 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6891;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227641947 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0296;AVGPOST=0.9982;RSQ=0.9773;ERATE=0.0002;THETA=0.0004;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 227642015 . CA C 2330 PASS INDEL;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0115;AVGPOST=0.9990;RSQ=0.9647;ERATE=0.0004;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227642119 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1841;AVGPOST=0.9989;RSQ=0.9965;ERATE=0.0004;THETA=0.0007;AC=402;AN=2184 GT:DS:GL:BD 0.18406594 0
1 227642187 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5043;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227642260 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.553;LDAF=0.0018;AVGPOST=0.9974;RSQ=0.5128;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227642281 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0011;AVGPOST=0.9981;RSQ=0.3173;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227642282 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1419;AVGPOST=0.9968;RSQ=0.9914;ERATE=0.0005;THETA=0.0006;AC=309;AN=2184 GT:DS:GL:BD 0.14148352 0
1 227642386 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9276;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227642730 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0614;AVGPOST=0.9993;RSQ=0.9943;ERATE=0.0003;THETA=0.0003;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 227642785 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0018;AVGPOST=0.9980;RSQ=0.5712;ERATE=0.0003;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227642880 . TG T 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4968;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227642911 . TGAGGAGGGAAA T 479 PASS INDEL;BAVGPOST=0.998;BRSQ=0.804;LDAF=0.0050;AVGPOST=0.9981;RSQ=0.8494;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227643009 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7051;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227643068 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6255;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227643089 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7529;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227643146 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.956;LDAF=0.0154;AVGPOST=0.9979;RSQ=0.9441;ERATE=0.0003;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 227643147 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227643149 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7315;ERATE=0.0003;THETA=0.0025;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227643154 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.6460;AVGPOST=0.9981;RSQ=0.9965;ERATE=0.0005;THETA=0.0004;AC=1411;AN=2184 GT:DS:GL:BD 0.64606225 1
1 227643169 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.844;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227643392 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0167;AVGPOST=0.9968;RSQ=0.9298;ERATE=0.0004;THETA=0.0006;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 227643444 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0035;AVGPOST=0.9987;RSQ=0.8529;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227643679 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.4879;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227643748 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.854;LDAF=0.0037;AVGPOST=0.9982;RSQ=0.8050;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227643762 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1783;AVGPOST=0.9994;RSQ=0.9979;ERATE=0.0003;THETA=0.0037;AC=389;AN=2184 GT:DS:GL:BD 0.17811355 0
1 227643834 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0027;AVGPOST=0.9973;RSQ=0.6785;ERATE=0.0002;THETA=0.0061;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227643944 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0154;AVGPOST=0.9984;RSQ=0.9608;ERATE=0.0003;THETA=0.0005;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 227644017 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7568;ERATE=0.0006;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227644042 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227644048 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0047;AVGPOST=0.9994;RSQ=0.9383;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227644156 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227644231 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227644261 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.784;LDAF=0.0191;AVGPOST=0.9953;RSQ=0.9067;ERATE=0.0004;THETA=0.0007;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 227644300 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0027;AVGPOST=0.9956;RSQ=0.3335;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227644323 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2807;AVGPOST=0.9960;RSQ=0.9915;ERATE=0.0004;THETA=0.0002;AC=612;AN=2184 GT:DS:GL:BD 0.28021979 0
1 227644418 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.718;LDAF=0.0046;AVGPOST=0.9964;RSQ=0.6977;ERATE=0.0004;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227644747 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9848;ERATE=0.0002;THETA=0.0039;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227644770 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0032;AVGPOST=0.9981;RSQ=0.7752;ERATE=0.0007;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227644842 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9630;ERATE=0.0002;THETA=0.0014;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227645036 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.6622;AVGPOST=0.9964;RSQ=0.9938;ERATE=0.0006;THETA=0.0036;AC=1448;AN=2184 GT:DS:GL:BD 0.66300368 1
1 227645037 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0057;AVGPOST=0.9994;RSQ=0.9510;ERATE=0.0004;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227645131 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.8466;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227645160 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0040;AVGPOST=0.9992;RSQ=0.9168;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227645168 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.824;LDAF=0.0045;AVGPOST=0.9983;RSQ=0.8573;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227645171 . G GC 79 PASS INDEL;BAVGPOST=1.000;BRSQ=0.702;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4884;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227645175 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.775;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8730;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227645196 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9741;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227645346 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.760;LDAF=0.9669;AVGPOST=0.9697;RSQ=0.6359;ERATE=0.0029;THETA=0.0006;AC=2127;AN=2184 GT:DS:GL:BD 0.97390109 1
1 227645446 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.715;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6586;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227645513 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0009;AVGPOST=0.9986;RSQ=0.3103;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227645548 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.748;LDAF=0.0025;AVGPOST=0.9973;RSQ=0.5341;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227645560 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0059;AVGPOST=0.9966;RSQ=0.7718;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227645665 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9727;ERATE=0.0003;THETA=0.0009;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227645709 . A AGTGGG 174 PASS INDEL;BAVGPOST=0.999;BRSQ=0.637;LDAF=0.0066;AVGPOST=0.9945;RSQ=0.7113;ERATE=0.0005;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227645768 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.573;LDAF=0.0020;AVGPOST=0.9981;RSQ=0.6267;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227645780 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0030;AVGPOST=0.9987;RSQ=0.8330;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227645855 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5332;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227645859 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0004;AVGPOST=0.9996;RSQ=0.5850;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227645870 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6520;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227645891 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6072;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227645952 . CTTAA C 133 PASS INDEL;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5948;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227646040 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.1649;AVGPOST=0.9962;RSQ=0.9887;ERATE=0.0005;THETA=0.0003;AC=359;AN=2184 GT:DS:GL:BD 0.16437729 0
1 227646225 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.610;LDAF=0.0028;AVGPOST=0.9979;RSQ=0.7132;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227646313 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0130;AVGPOST=0.9981;RSQ=0.9449;ERATE=0.0003;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 227646321 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.700;LDAF=0.0130;AVGPOST=0.9947;RSQ=0.8349;ERATE=0.0006;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227646335 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.952;LDAF=0.1623;AVGPOST=0.9863;RSQ=0.9600;ERATE=0.0009;THETA=0.0006;AC=356;AN=2184 GT:DS:GL:BD 0.16300367 0
1 227646340 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0024;AVGPOST=0.9986;RSQ=0.7536;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227646448 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0052;AVGPOST=0.9978;RSQ=0.8333;ERATE=0.0004;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227646480 . AG A 55 PASS INDEL;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5192;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227646519 . G GA 96 PASS INDEL;BAVGPOST=0.987;BRSQ=0.509;LDAF=0.0231;AVGPOST=0.9723;RSQ=0.5147;ERATE=0.0070;THETA=0.0015;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 227646628 . G GAGGC 147 PASS INDEL;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5258;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227646647 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.406;LDAF=0.0086;AVGPOST=0.9910;RSQ=0.5780;ERATE=0.0013;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 227646661 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8857;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227646743 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7334;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227646947 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0002;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227647030 . TA T 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5429;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227647049 . G GGCT 115 PASS INDEL;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6295;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227647123 rs72548210 A AT 7961 PASS INDEL;BAVGPOST=0.988;BRSQ=0.956;LDAF=0.1560;AVGPOST=0.9635;RSQ=0.8990;ERATE=0.0066;THETA=0.0005;AC=322;AN=2184 GT:DS:GL:BD 0.14743590 0
1 227647158 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0037;AVGPOST=0.9981;RSQ=0.8138;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227647172 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9893;AVGPOST=0.9995;RSQ=0.9772;ERATE=0.0003;THETA=0.0006;AC=2161;AN=2184 GT:DS:GL:BD 0.98946887 1
1 227647295 rs72088238 T TA 9287 PASS INDEL;BAVGPOST=0.970;BRSQ=0.888;LDAF=0.1721;AVGPOST=0.9424;RSQ=0.8412;ERATE=0.0127;THETA=0.0005;AC=355;AN=2184 GT:DS:GL:BD 0.16254579 0
1 227647422 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9461;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227647548 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227647569 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.8075;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227647609 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.5034;AVGPOST=0.9944;RSQ=0.9912;ERATE=0.0006;THETA=0.0004;AC=1099;AN=2184 GT:DS:GL:BD 0.50320512 1
1 227647628 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.726;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4017;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227647723 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1383;AVGPOST=0.9968;RSQ=0.9908;ERATE=0.0004;THETA=0.0005;AC=301;AN=2184 GT:DS:GL:BD 0.13782051 0
1 227647922 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.886;LDAF=0.0094;AVGPOST=0.9989;RSQ=0.9461;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 227647989 . AG A 491 PASS INDEL;BAVGPOST=0.999;BRSQ=0.825;LDAF=0.0046;AVGPOST=0.9956;RSQ=0.6647;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227648058 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6612;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227648076 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227648096 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0026;AVGPOST=0.9979;RSQ=0.6820;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227648155 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0051;AVGPOST=0.9985;RSQ=0.8646;ERATE=0.0010;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227648206 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227648308 . A AT 580 PASS INDEL;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0066;AVGPOST=0.9995;RSQ=0.9647;ERATE=0.0003;THETA=0.0008;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 227648309 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0104;AVGPOST=0.9968;RSQ=0.9069;ERATE=0.0002;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 227648396 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.833;LDAF=0.0032;AVGPOST=0.9973;RSQ=0.6513;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227648487 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9391;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227648578 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7047;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227648619 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0065;AVGPOST=0.9979;RSQ=0.8857;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227648635 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227648661 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8134;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227648709 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7618;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227648722 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4226;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227648765 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8726;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227648783 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0002;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227649047 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9865;ERATE=0.0002;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227649424 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9689;ERATE=0.0002;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227649581 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0037;AVGPOST=0.9987;RSQ=0.8682;ERATE=0.0006;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227649664 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9789;ERATE=0.0003;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227649669 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227649731 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0051;AVGPOST=0.9980;RSQ=0.8579;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227649771 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0184;AVGPOST=0.9989;RSQ=0.9741;ERATE=0.0003;THETA=0.0010;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 227649935 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9643;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227650037 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9537;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227650067 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.751;LDAF=0.0038;AVGPOST=0.9959;RSQ=0.6347;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227650099 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227650127 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0059;AVGPOST=0.9979;RSQ=0.8776;ERATE=0.0005;THETA=0.0001;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227650185 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0017;AVGPOST=0.9986;RSQ=0.6910;ERATE=0.0002;THETA=0.0019;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227650193 . A AG 21 PASS INDEL;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227650286 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0049;AVGPOST=0.9974;RSQ=0.8065;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227650385 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1364;AVGPOST=0.9992;RSQ=0.9970;ERATE=0.0003;THETA=0.0005;AC=298;AN=2184 GT:DS:GL:BD 0.13644689 0
1 227650458 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6343;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227650534 . CT C 332 PASS INDEL;BAVGPOST=0.998;BRSQ=0.836;LDAF=0.0058;AVGPOST=0.9992;RSQ=0.9367;ERATE=0.0004;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227650576 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.529;LDAF=0.0017;AVGPOST=0.9976;RSQ=0.4626;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227650604 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.864;LDAF=0.0067;AVGPOST=0.9972;RSQ=0.8379;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 227650608 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.721;LDAF=0.0069;AVGPOST=0.9973;RSQ=0.8613;ERATE=0.0004;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 227650680 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0613;AVGPOST=0.9987;RSQ=0.9909;ERATE=0.0004;THETA=0.0005;AC=133;AN=2184 GT:DS:GL:BD 0.06089744 0
1 227650754 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.966;LDAF=0.8168;AVGPOST=0.9823;RSQ=0.9592;ERATE=0.0020;THETA=0.0003;AC=1787;AN=2184 GT:DS:GL:BD 0.81822342 1
1 227650942 . TCTCA T 9126 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0579;AVGPOST=0.9994;RSQ=0.9950;ERATE=0.0003;THETA=0.0008;AC=126;AN=2184 GT:DS:GL:BD 0.05769231 0
1 227650984 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.5669;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227651108 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9201;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227651124 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0020;AVGPOST=0.9983;RSQ=0.6623;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227651434 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.971;LDAF=0.1574;AVGPOST=0.9980;RSQ=0.9930;ERATE=0.0003;THETA=0.0003;AC=344;AN=2184 GT:DS:GL:BD 0.15750916 0
1 227651454 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8283;AVGPOST=0.9979;RSQ=0.9939;ERATE=0.0006;THETA=0.0004;AC=1808;AN=2184 GT:DS:GL:BD 0.82783884 1
1 227651514 rs56977054 TG T 6836 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0603;AVGPOST=0.9990;RSQ=0.9934;ERATE=0.0004;THETA=0.0004;AC=131;AN=2184 GT:DS:GL:BD 0.05998169 0
1 227651790 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0220;AVGPOST=0.9988;RSQ=0.9787;ERATE=0.0003;THETA=0.0005;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 227651892 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9350;ERATE=0.0002;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227651947 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0009;AVGPOST=0.9986;RSQ=0.4079;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227652061 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227652167 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9893;AVGPOST=0.9996;RSQ=0.9859;ERATE=0.0002;THETA=0.0004;AC=2161;AN=2184 GT:DS:GL:BD 0.98946887 1
1 227652266 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0041;AVGPOST=0.9998;RSQ=0.9741;ERATE=0.0004;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227652267 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5972;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227652363 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0062;AVGPOST=0.9987;RSQ=0.9192;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227652407 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0181;AVGPOST=0.9995;RSQ=0.9878;ERATE=0.0003;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 227652440 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1499;AVGPOST=0.9987;RSQ=0.9957;ERATE=0.0002;THETA=0.0002;AC=327;AN=2184 GT:DS:GL:BD 0.14972527 0
1 227652453 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7696;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227652541 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5207;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227652618 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0029;AVGPOST=0.9980;RSQ=0.7173;ERATE=0.0005;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227652736 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.780;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4718;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227652737 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.6412;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227652908 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8964;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227652939 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0088;AVGPOST=0.9993;RSQ=0.9668;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 227653023 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9997;RSQ=0.9545;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227653047 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1492;AVGPOST=0.9979;RSQ=0.9932;ERATE=0.0006;THETA=0.0006;AC=325;AN=2184 GT:DS:GL:BD 0.14880952 0
1 227653103 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5448;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227653111 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227653115 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9990;RSQ=0.9333;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227653116 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7793;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227653300 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9607;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227653390 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.671;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5738;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227653489 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.6458;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227653542 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0030;AVGPOST=0.9982;RSQ=0.7700;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227653615 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.8176;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227653619 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0090;AVGPOST=0.9994;RSQ=0.9705;ERATE=0.0003;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 227653660 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0045;AVGPOST=0.9992;RSQ=0.9470;ERATE=0.0002;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227653670 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0181;AVGPOST=0.9994;RSQ=0.9871;ERATE=0.0002;THETA=0.0005;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 227653695 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0002;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227653738 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.896;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.7986;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227653765 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0036;AVGPOST=0.9994;RSQ=0.9426;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227653828 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0082;AVGPOST=1.0000;RSQ=0.9973;ERATE=0.0002;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 227653840 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1496;AVGPOST=0.9995;RSQ=0.9982;ERATE=0.0002;THETA=0.0003;AC=327;AN=2184 GT:DS:GL:BD 0.14972527 0
1 227653885 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1362;AVGPOST=0.9995;RSQ=0.9983;ERATE=0.0003;THETA=0.0001;AC=298;AN=2184 GT:DS:GL:BD 0.13644689 0
1 227653913 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7417;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227653939 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8298;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227653957 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.6029;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227653973 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227654071 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.8261;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227654176 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227654294 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1580;AVGPOST=0.9970;RSQ=0.9904;ERATE=0.0008;THETA=0.0004;AC=344;AN=2184 GT:DS:GL:BD 0.15750916 0
1 227654431 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.9124;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227654483 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0045;AVGPOST=0.9994;RSQ=0.9495;ERATE=0.0002;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227654485 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1377;AVGPOST=0.9998;RSQ=0.9993;ERATE=0.0003;THETA=0.0003;AC=301;AN=2184 GT:DS:GL:BD 0.13782051 0
1 227654615 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0036;AVGPOST=0.9984;RSQ=0.8347;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227654649 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.991;LDAF=0.3257;AVGPOST=0.9952;RSQ=0.9918;ERATE=0.0014;THETA=0.0009;AC=712;AN=2184 GT:DS:GL:BD 0.32600734 0
1 227654740 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9741;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227654764 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227654766 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7428;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227654848 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7608;ERATE=0.0002;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227654991 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227655052 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5060;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227655090 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.8102;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227655222 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2879;AVGPOST=0.9986;RSQ=0.9976;ERATE=0.0003;THETA=0.0003;AC=628;AN=2184 GT:DS:GL:BD 0.28754580 0
1 227655314 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1365;AVGPOST=0.9991;RSQ=0.9972;ERATE=0.0002;THETA=0.0006;AC=297;AN=2184 GT:DS:GL:BD 0.13598901 0
1 227655333 . T TA 41 PASS INDEL;BAVGPOST=0.998;BRSQ=0.479;LDAF=0.0043;AVGPOST=0.9970;RSQ=0.6928;ERATE=0.0005;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227655394 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.834;LDAF=0.0049;AVGPOST=0.9986;RSQ=0.9032;ERATE=0.0002;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227655541 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227655649 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5263;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227655692 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0066;AVGPOST=0.9992;RSQ=0.9490;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 227655802 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9888;AVGPOST=0.9986;RSQ=0.9453;ERATE=0.0005;THETA=0.0010;AC=2161;AN=2184 GT:DS:GL:BD 0.98946887 1
1 227655804 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1366;AVGPOST=0.9980;RSQ=0.9940;ERATE=0.0003;THETA=0.0003;AC=298;AN=2184 GT:DS:GL:BD 0.13644689 0
1 227655821 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6704;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227655854 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0022;AVGPOST=0.9991;RSQ=0.8237;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227655862 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0036;AVGPOST=0.9975;RSQ=0.7234;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227655912 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227655929 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6151;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227656004 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9990;RSQ=0.9149;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227656180 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6362;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227656187 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227656260 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.793;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7570;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227656270 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9502;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227656295 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9072;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227656297 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8811;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227656307 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=0.9997;RSQ=0.9773;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227656390 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.962;LDAF=0.0598;AVGPOST=0.9985;RSQ=0.9896;ERATE=0.0003;THETA=0.0003;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 227656480 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0018;AVGPOST=0.9997;RSQ=0.9193;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227656503 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0130;AVGPOST=0.9985;RSQ=0.9571;ERATE=0.0002;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 227656644 rs35450245 AT A 1206 PASS INDEL;BAVGPOST=0.996;BRSQ=0.853;LDAF=0.0129;AVGPOST=0.9966;RSQ=0.8947;ERATE=0.0004;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227656690 . A AT 82 PASS INDEL;BAVGPOST=0.989;BRSQ=0.527;LDAF=0.0207;AVGPOST=0.9737;RSQ=0.5005;ERATE=0.0051;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 227656768 . TCCTCCTG T 151 PASS INDEL;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8450;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227656782 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8463;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227656858 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.903;LDAF=0.0203;AVGPOST=0.9980;RSQ=0.9600;ERATE=0.0003;THETA=0.0004;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 227656863 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5747;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227656864 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0087;AVGPOST=0.9999;RSQ=0.9949;ERATE=0.0002;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 227656866 . TAAA T 51 PASS INDEL;BAVGPOST=0.999;BRSQ=0.739;LDAF=0.0020;AVGPOST=0.9978;RSQ=0.5927;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227656952 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.865;LDAF=0.0144;AVGPOST=0.9973;RSQ=0.9321;ERATE=0.0005;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 227657088 rs10531200 TTA T 95037 PASS INDEL;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.8266;AVGPOST=0.9972;RSQ=0.9923;ERATE=0.0005;THETA=0.0006;AC=1805;AN=2184 GT:DS:GL:BD 0.82646519 1
1 227657241 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.9872;AVGPOST=0.9982;RSQ=0.9373;ERATE=0.0004;THETA=0.0004;AC=2158;AN=2184 GT:DS:GL:BD 0.98809522 1
1 227657321 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1244;AVGPOST=0.9976;RSQ=0.9918;ERATE=0.0003;THETA=0.0013;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 227657336 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.8268;AVGPOST=0.9979;RSQ=0.9939;ERATE=0.0005;THETA=0.0004;AC=1805;AN=2184 GT:DS:GL:BD 0.82646519 1
1 227657381 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5012;AVGPOST=0.9955;RSQ=0.9933;ERATE=0.0003;THETA=0.0005;AC=1095;AN=2184 GT:DS:GL:BD 0.50137365 1
1 227657391 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227657465 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.511;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6623;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227657499 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0057;AVGPOST=0.9992;RSQ=0.9392;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227657510 . ATT A 178 PASS INDEL;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0015;AVGPOST=0.9990;RSQ=0.7307;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227657512 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0058;AVGPOST=0.9989;RSQ=0.9188;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227657665 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0088;AVGPOST=0.9999;RSQ=0.9927;ERATE=0.0002;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 227657705 . TTC T 228 PASS INDEL;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8589;ERATE=0.0002;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227657727 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9497;ERATE=0.0002;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227657794 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0099;AVGPOST=0.9983;RSQ=0.9321;ERATE=0.0004;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 227657820 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0033;AVGPOST=0.9995;RSQ=0.9354;ERATE=0.0002;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227658009 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9364;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227658273 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.842;LDAF=0.0188;AVGPOST=0.9936;RSQ=0.8673;ERATE=0.0005;THETA=0.0006;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 227658424 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9312;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227658444 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.8273;AVGPOST=0.9983;RSQ=0.9954;ERATE=0.0003;THETA=0.0006;AC=1807;AN=2184 GT:DS:GL:BD 0.82738096 1
1 227658463 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0051;AVGPOST=0.9991;RSQ=0.9364;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 227658526 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5980;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227658543 . G GC 606 PASS INDEL;BAVGPOST=0.989;BRSQ=0.667;LDAF=0.0247;AVGPOST=0.9764;RSQ=0.6274;ERATE=0.0015;THETA=0.0002;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 227658551 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0002;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227658607 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.934;LDAF=0.0130;AVGPOST=0.9979;RSQ=0.9364;ERATE=0.0004;THETA=0.0008;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 227658661 . C CA 174 PASS INDEL;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227658670 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0088;AVGPOST=0.9997;RSQ=0.9824;ERATE=0.0003;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 227658697 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0128;AVGPOST=0.9999;RSQ=0.9948;ERATE=0.0002;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 227658753 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.8266;AVGPOST=0.9989;RSQ=0.9969;ERATE=0.0004;THETA=0.0002;AC=1804;AN=2184 GT:DS:GL:BD 0.82600731 1
1 227658818 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0002;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227658846 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.9854;AVGPOST=0.9991;RSQ=0.9724;ERATE=0.0003;THETA=0.0008;AC=2153;AN=2184 GT:DS:GL:BD 0.98580587 1
1 227658943 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.839;LDAF=0.0103;AVGPOST=0.9967;RSQ=0.8569;ERATE=0.0005;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 227658952 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9993;RSQ=0.9220;ERATE=0.0003;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227659032 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0040;AVGPOST=0.9992;RSQ=0.9354;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227659248 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7089;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227659395 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7074;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227659459 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6963;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227659508 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0141;AVGPOST=0.9995;RSQ=0.9843;ERATE=0.0003;THETA=0.0002;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 227659611 . CT C 72 PASS INDEL;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7163;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227659615 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1519;AVGPOST=0.9996;RSQ=0.9987;ERATE=0.0003;THETA=0.0007;AC=332;AN=2184 GT:DS:GL:BD 0.15201466 0
1 227659693 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.9886;AVGPOST=0.9992;RSQ=0.9739;ERATE=0.0002;THETA=0.0002;AC=2159;AN=2184 GT:DS:GL:BD 0.98855311 1
1 227659717 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.873;LDAF=0.0112;AVGPOST=0.9994;RSQ=0.9725;ERATE=0.0003;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 227659840 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0030;AVGPOST=0.9996;RSQ=0.9466;ERATE=0.0002;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227660040 . CT C 635 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0057;AVGPOST=0.9996;RSQ=0.9657;ERATE=0.0002;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227660134 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227660243 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=0.9999;RSQ=0.9920;ERATE=0.0002;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227660457 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227660490 . A AG 448 PASS INDEL;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0062;AVGPOST=0.9982;RSQ=0.8815;ERATE=0.0005;THETA=0.0021;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227660517 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.5564;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227660726 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0023;AVGPOST=0.9998;RSQ=0.9537;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227660782 . T TC 595 PASS INDEL;BAVGPOST=0.991;BRSQ=0.608;LDAF=0.0196;AVGPOST=0.9799;RSQ=0.5875;ERATE=0.0024;THETA=0.0008;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 227660817 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0024;AVGPOST=0.9986;RSQ=0.7744;ERATE=0.0003;THETA=0.0019;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227660853 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0020;AVGPOST=0.9991;RSQ=0.8109;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227661044 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9812;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227661082 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1487;AVGPOST=0.9990;RSQ=0.9973;ERATE=0.0004;THETA=0.0006;AC=325;AN=2184 GT:DS:GL:BD 0.14880952 0
1 227661088 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6913;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227661157 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0772;AVGPOST=0.9996;RSQ=0.9979;ERATE=0.0002;THETA=0.0004;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 227661159 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227661239 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6610;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227661317 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227661458 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6402;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227661530 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=0.9998;RSQ=0.9731;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227661592 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.867;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7726;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227661713 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.820;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8100;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227661735 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0036;AVGPOST=0.9993;RSQ=0.9063;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227661891 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8838;ERATE=0.0002;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227661932 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.983;LDAF=0.1594;AVGPOST=0.9949;RSQ=0.9833;ERATE=0.0004;THETA=0.0007;AC=347;AN=2184 GT:DS:GL:BD 0.15888278 0
1 227661978 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0804;AVGPOST=0.9992;RSQ=0.9952;ERATE=0.0003;THETA=0.0013;AC=176;AN=2184 GT:DS:GL:BD 0.08058608 0
1 227662098 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.981;LDAF=0.1380;AVGPOST=0.9963;RSQ=0.9874;ERATE=0.0004;THETA=0.0004;AC=301;AN=2184 GT:DS:GL:BD 0.13782051 0
1 227662128 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6569;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227662145 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9766;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227662146 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.988;LDAF=0.1365;AVGPOST=0.9976;RSQ=0.9919;ERATE=0.0003;THETA=0.0036;AC=297;AN=2184 GT:DS:GL:BD 0.13598901 0
1 227662360 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0037;AVGPOST=0.9990;RSQ=0.8955;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227662563 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5517;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227662610 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5066;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227662709 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9804;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227662909 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.733;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227663026 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7865;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227663045 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9865;ERATE=0.0002;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227663064 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0073;AVGPOST=0.9980;RSQ=0.8976;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 227663169 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0036;AVGPOST=0.9972;RSQ=0.7369;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227663173 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227663192 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0022;AVGPOST=0.9991;RSQ=0.8127;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227663221 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9174;ERATE=0.0002;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227663282 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.763;LDAF=0.0028;AVGPOST=0.9963;RSQ=0.5287;ERATE=0.0005;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227663424 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0036;AVGPOST=0.9993;RSQ=0.9064;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227663453 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0030;AVGPOST=0.9977;RSQ=0.7409;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227663487 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.978;LDAF=0.0612;AVGPOST=0.9987;RSQ=0.9899;ERATE=0.0003;THETA=0.0003;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 227663516 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0089;AVGPOST=0.9994;RSQ=0.9714;ERATE=0.0002;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 227663524 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9144;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227663571 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0039;AVGPOST=0.9994;RSQ=0.9344;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227663623 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.983;LDAF=0.1685;AVGPOST=0.9952;RSQ=0.9850;ERATE=0.0009;THETA=0.0005;AC=366;AN=2184 GT:DS:GL:BD 0.16758242 0
1 227663657 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.754;LDAF=0.0031;AVGPOST=0.9991;RSQ=0.8748;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227663672 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.9880;AVGPOST=0.9984;RSQ=0.9518;ERATE=0.0003;THETA=0.0006;AC=2158;AN=2184 GT:DS:GL:BD 0.98809522 1
1 227663778 . AC A 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.649;LDAF=0.0037;AVGPOST=0.9953;RSQ=0.5800;ERATE=0.0004;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227663781 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.683;LDAF=0.0026;AVGPOST=0.9980;RSQ=0.7318;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227663796 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0056;AVGPOST=0.9995;RSQ=0.9619;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227663814 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0057;AVGPOST=0.9991;RSQ=0.9280;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227663817 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227663841 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.9031;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227663847 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.961;LDAF=0.9753;AVGPOST=0.9975;RSQ=0.9589;ERATE=0.0005;THETA=0.0007;AC=2130;AN=2184 GT:DS:GL:BD 0.97527474 1
1 227664115 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0024;AVGPOST=0.9980;RSQ=0.6748;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227664385 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0586;AVGPOST=0.9993;RSQ=0.9941;ERATE=0.0002;THETA=0.0013;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 227664462 . TG T 675 PASS INDEL;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9133;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227664731 rs34230963 GA G 15481 PASS INDEL;BAVGPOST=0.997;BRSQ=0.987;LDAF=0.1522;AVGPOST=0.9915;RSQ=0.9742;ERATE=0.0007;THETA=0.0005;AC=330;AN=2184 GT:DS:GL:BD 0.15109891 0
1 227664910 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0084;AVGPOST=0.9971;RSQ=0.8826;ERATE=0.0004;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227665074 . TAA T 343 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0046;AVGPOST=0.9995;RSQ=0.9551;ERATE=0.0003;THETA=0.0013;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227665195 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.822;LDAF=0.0072;AVGPOST=0.9975;RSQ=0.8548;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 227665219 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.674;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7282;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227665259 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1466;AVGPOST=0.9980;RSQ=0.9936;ERATE=0.0004;THETA=0.0003;AC=322;AN=2184 GT:DS:GL:BD 0.14743590 0
1 227665302 . A AAC 22 PASS INDEL;BAVGPOST=0.996;BRSQ=0.761;LDAF=0.0098;AVGPOST=0.9952;RSQ=0.8033;ERATE=0.0007;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 227665372 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0021;AVGPOST=0.9990;RSQ=0.8137;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227665479 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=0.9998;RSQ=0.9805;ERATE=0.0002;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227665521 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6624;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227665737 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227665808 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0022;AVGPOST=0.9977;RSQ=0.5815;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227665837 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.699;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4596;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227665851 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0067;AVGPOST=0.9991;RSQ=0.9455;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 227665927 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9244;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227666092 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0028;AVGPOST=0.9977;RSQ=0.6987;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227666108 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227666146 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227666180 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.824;LDAF=0.0144;AVGPOST=0.9962;RSQ=0.8975;ERATE=0.0004;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 227666186 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.764;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7402;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227666191 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0775;AVGPOST=0.9992;RSQ=0.9957;ERATE=0.0003;THETA=0.0006;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 227666215 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1386;AVGPOST=0.9981;RSQ=0.9934;ERATE=0.0003;THETA=0.0005;AC=303;AN=2184 GT:DS:GL:BD 0.13873626 0
1 227666375 . CAG C 437 PASS INDEL;BAVGPOST=0.997;BRSQ=0.827;LDAF=0.0118;AVGPOST=0.9983;RSQ=0.9450;ERATE=0.0003;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 227666486 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227666491 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0030;AVGPOST=0.9989;RSQ=0.8320;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 227666601 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.1382;AVGPOST=0.9983;RSQ=0.9942;ERATE=0.0005;THETA=0.0004;AC=303;AN=2184 GT:DS:GL:BD 0.13873626 0
1 227666616 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0073;AVGPOST=0.9988;RSQ=0.9309;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 227666617 . T TA 1355 PASS INDEL;BAVGPOST=0.996;BRSQ=0.851;LDAF=0.0158;AVGPOST=0.9953;RSQ=0.8803;ERATE=0.0009;THETA=0.0006;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 227666701 . C CA 200 PASS INDEL;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0058;AVGPOST=0.9940;RSQ=0.6288;ERATE=0.0004;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227666824 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.710;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5546;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227666859 . A AG 22 PASS INDEL;BAVGPOST=1.000;BRSQ=0.742;LDAF=0.0045;AVGPOST=0.9956;RSQ=0.6315;ERATE=0.0005;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227666860 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0002;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227666949 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.948;LDAF=0.7783;AVGPOST=0.9659;RSQ=0.9233;ERATE=0.0112;THETA=0.0005;AC=1706;AN=2184 GT:DS:GL:BD 0.78113556 1
1 227666957 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227666975 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0020;AVGPOST=0.9986;RSQ=0.7115;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227667056 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0056;AVGPOST=0.9991;RSQ=0.9321;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227667152 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.727;LDAF=0.0025;AVGPOST=0.9988;RSQ=0.8588;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227667187 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.1026;AVGPOST=0.9972;RSQ=0.9886;ERATE=0.0002;THETA=0.0003;AC=222;AN=2184 GT:DS:GL:BD 0.10164835 0
1 227667263 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.8102;ERATE=0.0003;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227667264 . CAT C 66 PASS INDEL;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0025;AVGPOST=0.9979;RSQ=0.6953;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227667383 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.821;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8189;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227667478 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0057;AVGPOST=0.9977;RSQ=0.8386;ERATE=0.0004;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227667493 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.725;LDAF=0.0045;AVGPOST=0.9964;RSQ=0.6929;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227667518 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.778;LDAF=0.0043;AVGPOST=0.9981;RSQ=0.8163;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227667611 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9380;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227667615 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0002;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227667649 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.704;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7967;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227667677 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0044;AVGPOST=0.9968;RSQ=0.7357;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227667736 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1499;AVGPOST=0.9984;RSQ=0.9945;ERATE=0.0002;THETA=0.0005;AC=327;AN=2184 GT:DS:GL:BD 0.14972527 0
1 227667778 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7390;ERATE=0.0002;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227667787 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0059;AVGPOST=0.9992;RSQ=0.9376;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227667790 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1381;AVGPOST=0.9988;RSQ=0.9960;ERATE=0.0003;THETA=0.0004;AC=303;AN=2184 GT:DS:GL:BD 0.13873626 0
1 227667889 . C CAAG 64 PASS INDEL;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6377;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227667959 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9544;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 227668000 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227668085 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9667;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227668181 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.8242;AVGPOST=0.9984;RSQ=0.9961;ERATE=0.0002;THETA=0.0008;AC=1801;AN=2184 GT:DS:GL:BD 0.82463372 1
1 227668372 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0035;AVGPOST=0.9985;RSQ=0.8364;ERATE=0.0003;THETA=0.0012;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227668393 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227668418 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=1.0000;RSQ=0.9960;ERATE=0.0002;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227668480 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227668523 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8115;ERATE=0.0003;THETA=0.0032;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 227668541 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6051;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227668598 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7609;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227668701 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.916;LDAF=0.0117;AVGPOST=0.9991;RSQ=0.9652;ERATE=0.0003;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 227668821 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9843;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227668916 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9797;ERATE=0.0002;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227669053 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0004;AVGPOST=0.9994;RSQ=0.4378;ERATE=0.0003;THETA=0.0007;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 227669332 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.605;LDAF=0.0054;AVGPOST=0.9940;RSQ=0.5854;ERATE=0.0011;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 227669333 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.737;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4146;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227669393 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.8390;AVGPOST=0.9987;RSQ=0.9960;ERATE=0.0003;THETA=0.0003;AC=1833;AN=2184 GT:DS:GL:BD 0.83928573 1
1 227669455 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6461;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227669467 . TTA T 1036 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0059;AVGPOST=0.9991;RSQ=0.9329;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227669474 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1383;AVGPOST=0.9993;RSQ=0.9975;ERATE=0.0003;THETA=0.0013;AC=303;AN=2184 GT:DS:GL:BD 0.13873626 0
1 227669491 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227669492 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7638;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227669493 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8736;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227669575 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6933;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227669637 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=0.9998;RSQ=0.9548;ERATE=0.0002;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227669682 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.8457;AVGPOST=0.9987;RSQ=0.9964;ERATE=0.0003;THETA=0.0005;AC=1847;AN=2184 GT:DS:GL:BD 0.84569597 1
1 227669684 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227669765 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9647;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227669865 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.724;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6491;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227670338 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.9698;AVGPOST=0.9992;RSQ=0.9868;ERATE=0.0004;THETA=0.0003;AC=2118;AN=2184 GT:DS:GL:BD 0.96978021 1
1 227670409 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0047;AVGPOST=0.9996;RSQ=0.9583;ERATE=0.0003;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227670485 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6313;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227670637 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9350;ERATE=0.0002;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 227670690 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7221;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227670767 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.912;LDAF=0.0078;AVGPOST=0.9988;RSQ=0.9432;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 227670783 . ATT A 130 PASS INDEL;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6110;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227670813 . CAA C 226 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9364;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227670934 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8455;AVGPOST=0.9983;RSQ=0.9944;ERATE=0.0004;THETA=0.0005;AC=1847;AN=2184 GT:DS:GL:BD 0.84569597 1
1 227670944 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6002;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 227670990 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.704;LDAF=0.0026;AVGPOST=0.9991;RSQ=0.8474;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 227671058 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6441;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227671070 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0146;AVGPOST=0.9986;RSQ=0.9633;ERATE=0.0002;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 227671075 . GAAGAA G 99 PASS INDEL;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0024;AVGPOST=0.9983;RSQ=0.6952;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 227671138 . A AC 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4622;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227671167 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0057;AVGPOST=0.9996;RSQ=0.9690;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 227671178 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.4017;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 227671199 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.909;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9558;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 227671235 . G GT 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4575;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0