1092
10000
1 233659760 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233659776 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5882;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233659937 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0437;AVGPOST=0.9994;RSQ=0.9939;ERATE=0.0004;THETA=0.0002;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 233659976 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6188;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233659977 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0178;AVGPOST=0.9987;RSQ=0.9667;ERATE=0.0003;THETA=0.0001;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 233660125 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1726;AVGPOST=0.9989;RSQ=0.9971;ERATE=0.0002;THETA=0.0002;AC=376;AN=2184 GT:DS:GL:BD 0.17216118 0
1 233660316 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6395;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233660334 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.548;LDAF=0.0062;AVGPOST=0.9954;RSQ=0.7071;ERATE=0.0006;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 233660393 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5492;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233660510 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0055;AVGPOST=0.9999;RSQ=0.9921;ERATE=0.0002;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 233660520 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5525;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233660587 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0029;AVGPOST=0.9998;RSQ=0.9618;ERATE=0.0003;THETA=0.0001;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233660652 . G GA 96 PASS INDEL;BAVGPOST=0.989;BRSQ=0.496;LDAF=0.0275;AVGPOST=0.9641;RSQ=0.5044;ERATE=0.0080;THETA=0.0001;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 233660744 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233660758 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0323;AVGPOST=0.9994;RSQ=0.9910;ERATE=0.0004;THETA=0.0009;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 233660776 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9524;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233660810 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0021;AVGPOST=0.9971;RSQ=0.4984;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233660907 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0022;AVGPOST=0.9979;RSQ=0.6485;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233660985 . C CA 4199 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0318;AVGPOST=0.9995;RSQ=0.9926;ERATE=0.0002;THETA=0.0001;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 233661003 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3305;AVGPOST=0.9989;RSQ=0.9980;ERATE=0.0003;THETA=0.0002;AC=722;AN=2184 GT:DS:GL:BD 0.33058608 0
1 233661046 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9700;ERATE=0.0002;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233661113 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0149;AVGPOST=0.9994;RSQ=0.9876;ERATE=0.0002;THETA=0.0002;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 233661141 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9682;ERATE=0.0002;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233661172 . T TA 7452 PASS INDEL;BAVGPOST=0.983;BRSQ=0.920;LDAF=0.1184;AVGPOST=0.9711;RSQ=0.8993;ERATE=0.0088;THETA=0.0003;AC=241;AN=2184 GT:DS:GL:BD 0.11034799 0
1 233661196 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233661258 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6276;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233661290 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0435;AVGPOST=0.9998;RSQ=0.9977;ERATE=0.0003;THETA=0.0002;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 233661387 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0027;AVGPOST=0.9993;RSQ=0.8844;ERATE=0.0009;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233661389 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0110;AVGPOST=0.9997;RSQ=0.9876;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 233661407 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8282;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233661431 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0668;AVGPOST=0.9991;RSQ=0.9939;ERATE=0.0004;THETA=0.0002;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 233661612 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0043;AVGPOST=0.9992;RSQ=0.9219;ERATE=0.0002;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233661617 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0318;AVGPOST=0.9994;RSQ=0.9899;ERATE=0.0004;THETA=0.0001;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 233661651 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0083;AVGPOST=0.9998;RSQ=0.9868;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 233661658 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0437;AVGPOST=0.9995;RSQ=0.9944;ERATE=0.0003;THETA=0.0003;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 233661705 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.6443;ERATE=0.0002;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233661726 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0316;AVGPOST=0.9998;RSQ=0.9971;ERATE=0.0002;THETA=0.0001;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 233661734 . C CA 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6223;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233661845 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8344;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233661846 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0032;AVGPOST=0.9992;RSQ=0.8884;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233661988 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0030;AVGPOST=0.9978;RSQ=0.7098;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233662009 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9333;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233662065 . A AG 51 PASS INDEL;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0028;AVGPOST=0.9971;RSQ=0.6052;ERATE=0.0011;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233662083 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0007;AVGPOST=0.9991;RSQ=0.4899;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233662129 . A ATTAC 440 PASS INDEL;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6217;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233662195 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8096;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233662301 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2154;AVGPOST=0.9981;RSQ=0.9958;ERATE=0.0003;THETA=0.0003;AC=469;AN=2184 GT:DS:GL:BD 0.21474358 0
1 233662324 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0045;AVGPOST=0.9990;RSQ=0.9063;ERATE=0.0005;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233662348 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0437;AVGPOST=0.9992;RSQ=0.9923;ERATE=0.0004;THETA=0.0005;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 233662388 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233662451 . C CAT 2061 PASS INDEL;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0170;AVGPOST=0.9960;RSQ=0.9074;ERATE=0.0010;THETA=0.0002;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 233662469 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.950;LDAF=0.0439;AVGPOST=0.9968;RSQ=0.9703;ERATE=0.0004;THETA=0.0003;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 233662479 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.873;LDAF=0.0056;AVGPOST=0.9967;RSQ=0.7600;ERATE=0.0005;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 233662503 . AG A 663 PASS INDEL;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0118;AVGPOST=0.9929;RSQ=0.7566;ERATE=0.0005;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 233662732 rs76013619 ACT A 19188 PASS INDEL;BAVGPOST=0.993;BRSQ=0.981;LDAF=0.2034;AVGPOST=0.9960;RSQ=0.9912;ERATE=0.0005;THETA=0.0002;AC=444;AN=2184 GT:DS:GL:BD 0.20329671 0
1 233662747 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.7037;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233662853 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0321;AVGPOST=0.9991;RSQ=0.9880;ERATE=0.0004;THETA=0.0003;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 233662922 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9514;ERATE=0.0002;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233663007 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7209;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233663032 . C CA 37259 PASS INDEL;BAVGPOST=0.990;BRSQ=0.982;LDAF=0.7527;AVGPOST=0.9929;RSQ=0.9856;ERATE=0.0006;THETA=0.0003;AC=1643;AN=2184 GT:DS:GL:BD 0.75228935 1
1 233663034 rs11388292 A AG 108365 PASS INDEL;BAVGPOST=0.992;BRSQ=0.984;LDAF=0.7543;AVGPOST=0.9942;RSQ=0.9876;ERATE=0.0015;THETA=0.0010;AC=1646;AN=2184 GT:DS:GL:BD 0.75366300 1
1 233663198 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0675;AVGPOST=0.9993;RSQ=0.9951;ERATE=0.0003;THETA=0.0002;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 233663251 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9213;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233663291 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4257;AVGPOST=0.9986;RSQ=0.9978;ERATE=0.0004;THETA=0.0003;AC=928;AN=2184 GT:DS:GL:BD 0.42490843 0
1 233663453 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233663498 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4258;AVGPOST=0.9984;RSQ=0.9973;ERATE=0.0004;THETA=0.0001;AC=930;AN=2184 GT:DS:GL:BD 0.42582417 0
1 233663549 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7576;ERATE=0.0004;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233663567 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.901;LDAF=0.0125;AVGPOST=0.9978;RSQ=0.9278;ERATE=0.0002;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 233663589 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0049;AVGPOST=0.9994;RSQ=0.9410;ERATE=0.0002;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 233663607 . CTTTA C 137 PASS INDEL;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7793;ERATE=0.0004;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233663633 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5538;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233663725 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0732;AVGPOST=0.9996;RSQ=0.9976;ERATE=0.0002;THETA=0.0002;AC=159;AN=2184 GT:DS:GL:BD 0.07280220 0
1 233663785 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0150;AVGPOST=0.9996;RSQ=0.9875;ERATE=0.0003;THETA=0.0002;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 233663807 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5245;AVGPOST=0.9989;RSQ=0.9980;ERATE=0.0004;THETA=0.0004;AC=1145;AN=2184 GT:DS:GL:BD 0.52426738 1
1 233663807 . TC T 231 PASS INDEL;BAVGPOST=0.996;BRSQ=0.932;LDAF=0.0317;AVGPOST=0.9955;RSQ=0.9425;ERATE=0.0008;THETA=0.0003;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 233663939 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0190;AVGPOST=0.9995;RSQ=0.9876;ERATE=0.0002;THETA=0.0005;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 233663940 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0025;AVGPOST=0.9991;RSQ=0.8688;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233663942 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.992;LDAF=0.5249;AVGPOST=0.9978;RSQ=0.9965;ERATE=0.0007;THETA=0.0001;AC=1145;AN=2184 GT:DS:GL:BD 0.52426738 1
1 233663997 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0029;AVGPOST=0.9998;RSQ=0.9618;ERATE=0.0002;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233664084 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9313;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233664086 . GAGA G 661 PASS INDEL;BAVGPOST=0.999;BRSQ=0.909;LDAF=0.0046;AVGPOST=0.9987;RSQ=0.8848;ERATE=0.0002;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233664107 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6902;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233664154 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0234;AVGPOST=0.9998;RSQ=0.9961;ERATE=0.0002;THETA=0.0002;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 233664192 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6469;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233664212 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9705;ERATE=0.0003;THETA=0.0001;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233664224 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.988;LDAF=0.4243;AVGPOST=0.9804;RSQ=0.9708;ERATE=0.0043;THETA=0.0004;AC=924;AN=2184 GT:DS:GL:BD 0.42307693 0
1 233664308 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233664409 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0053;AVGPOST=0.9987;RSQ=0.9117;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 233664454 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.5017;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233664469 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233664474 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0234;AVGPOST=0.9998;RSQ=0.9953;ERATE=0.0003;THETA=0.0003;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 233664606 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233664628 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233664637 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6497;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233664654 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0179;AVGPOST=0.9996;RSQ=0.9890;ERATE=0.0002;THETA=0.0006;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 233664671 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0996;AVGPOST=0.9991;RSQ=0.9959;ERATE=0.0003;THETA=0.0003;AC=216;AN=2184 GT:DS:GL:BD 0.09890110 0
1 233664734 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233664817 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0055;AVGPOST=0.9990;RSQ=0.9291;ERATE=0.0002;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 233664886 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0318;AVGPOST=0.9991;RSQ=0.9898;ERATE=0.0003;THETA=0.0003;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 233664918 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233664939 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0143;AVGPOST=0.9985;RSQ=0.9562;ERATE=0.0003;THETA=0.0002;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 233665027 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0326;AVGPOST=0.9998;RSQ=0.9966;ERATE=0.0002;THETA=0.0002;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 233665039 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233665045 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233665070 . CTG C 18 PASS INDEL;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6064;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233665112 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0002;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233665143 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0023;AVGPOST=0.9996;RSQ=0.9291;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233665145 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.808;LDAF=0.0023;AVGPOST=0.9997;RSQ=0.9458;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233665165 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7143;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233665174 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0326;AVGPOST=0.9997;RSQ=0.9959;ERATE=0.0003;THETA=0.0006;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 233665184 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5640;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233665349 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0325;AVGPOST=0.9996;RSQ=0.9945;ERATE=0.0003;THETA=0.0006;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 233665375 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6960;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233665381 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0038;AVGPOST=0.9983;RSQ=0.8289;ERATE=0.0002;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233665508 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0325;AVGPOST=0.9997;RSQ=0.9958;ERATE=0.0003;THETA=0.0003;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 233665515 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0673;AVGPOST=0.9989;RSQ=0.9920;ERATE=0.0003;THETA=0.0004;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 233665516 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0024;AVGPOST=0.9994;RSQ=0.8887;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233665518 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0325;AVGPOST=0.9999;RSQ=0.9979;ERATE=0.0002;THETA=0.0003;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 233665567 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0333;AVGPOST=0.9991;RSQ=0.9881;ERATE=0.0003;THETA=0.0003;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 233665608 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.4264;AVGPOST=0.9981;RSQ=0.9968;ERATE=0.0005;THETA=0.0006;AC=929;AN=2184 GT:DS:GL:BD 0.42536631 0
1 233665676 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8470;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233665739 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0334;AVGPOST=0.9979;RSQ=0.9758;ERATE=0.0004;THETA=0.0004;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 233665777 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233665801 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0061;AVGPOST=0.9960;RSQ=0.7738;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 233665802 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0281;AVGPOST=0.9995;RSQ=0.9918;ERATE=0.0003;THETA=0.0004;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 233665880 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0017;AVGPOST=0.9976;RSQ=0.5685;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233665927 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233665971 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233665992 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6683;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233666203 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233666207 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5992;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233666222 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0138;AVGPOST=0.9998;RSQ=0.9939;ERATE=0.0002;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 233666390 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.686;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.5894;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233666415 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.733;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6496;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233666436 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0052;AVGPOST=0.9990;RSQ=0.9410;ERATE=0.0002;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 233666462 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233666512 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0031;AVGPOST=0.9983;RSQ=0.8021;ERATE=0.0002;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233666647 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8088;ERATE=0.0009;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233666788 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0325;AVGPOST=0.9996;RSQ=0.9938;ERATE=0.0003;THETA=0.0003;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 233666793 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4826;AVGPOST=0.9955;RSQ=0.9928;ERATE=0.0009;THETA=0.0006;AC=1052;AN=2184 GT:DS:GL:BD 0.48168498 0
1 233666800 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0084;AVGPOST=0.9997;RSQ=0.9861;ERATE=0.0002;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 233666891 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233666892 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233666902 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9767;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233666904 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.836;LDAF=0.0023;AVGPOST=0.9986;RSQ=0.7266;ERATE=0.0006;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233667081 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.5530;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233667289 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6262;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233667338 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1402;AVGPOST=0.9974;RSQ=0.9917;ERATE=0.0003;THETA=0.0004;AC=303;AN=2184 GT:DS:GL:BD 0.13873626 0
1 233667470 . GT G 182 PASS INDEL;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0040;AVGPOST=0.9991;RSQ=0.8972;ERATE=0.0004;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233667487 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233667509 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.756;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4794;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233667593 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.6276;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233667611 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6936;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233667633 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233667736 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9300;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233667906 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0059;AVGPOST=0.9992;RSQ=0.9490;ERATE=0.0002;THETA=0.0010;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 233667955 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9171;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233667983 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9725;ERATE=0.0004;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 233668100 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0434;AVGPOST=0.9999;RSQ=0.9986;ERATE=0.0002;THETA=0.0003;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 233668127 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.860;LDAF=0.0041;AVGPOST=0.9979;RSQ=0.8052;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233668217 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6322;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233668236 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.684;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6078;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233668289 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6151;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233668366 . C CA 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0052;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233668414 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0054;AVGPOST=0.9983;RSQ=0.8780;ERATE=0.0004;THETA=0.0027;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 233668483 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0048;AVGPOST=0.9981;RSQ=0.8393;ERATE=0.0009;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233668508 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.7434;ERATE=0.0003;THETA=0.0023;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233668538 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0142;AVGPOST=0.9994;RSQ=0.9808;ERATE=0.0002;THETA=0.0002;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 233668556 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0100;AVGPOST=0.9995;RSQ=0.9843;ERATE=0.0002;THETA=0.0001;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 233668572 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233668646 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6940;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233668655 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0016;AVGPOST=0.9976;RSQ=0.4928;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233668656 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7404;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233668657 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6860;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233668726 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.4446;AVGPOST=0.9943;RSQ=0.9914;ERATE=0.0004;THETA=0.0002;AC=970;AN=2184 GT:DS:GL:BD 0.44413918 0
1 233668730 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0001;AVGPOST=0.9998;RSQ=0.0698;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 233668751 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.2420;AVGPOST=0.9957;RSQ=0.9908;ERATE=0.0004;THETA=0.0055;AC=529;AN=2184 GT:DS:GL:BD 0.24221611 0
1 233668799 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8470;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233668832 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0137;AVGPOST=1.0000;RSQ=0.9985;ERATE=0.0002;THETA=0.0009;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 233668968 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0034;AVGPOST=0.9988;RSQ=0.8632;ERATE=0.0004;THETA=0.0016;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233669044 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8448;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233669127 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6738;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233669173 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0260;AVGPOST=0.9992;RSQ=0.9869;ERATE=0.0003;THETA=0.0012;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 233669187 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0067;AVGPOST=0.9992;RSQ=0.9493;ERATE=0.0002;THETA=0.0024;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 233669364 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0002;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233669380 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0431;AVGPOST=0.9995;RSQ=0.9959;ERATE=0.0002;THETA=0.0006;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 233669390 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0050;AVGPOST=0.9990;RSQ=0.9118;ERATE=0.0002;THETA=0.0022;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 233669395 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6072;ERATE=0.0003;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233669456 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233669464 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0022;AVGPOST=0.9995;RSQ=0.9073;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233669495 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.801;LDAF=0.0046;AVGPOST=0.9978;RSQ=0.8178;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233669695 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4772;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233669752 . AC A 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4953;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233669770 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.572;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8037;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233669867 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1350;AVGPOST=0.9956;RSQ=0.9860;ERATE=0.0005;THETA=0.0006;AC=291;AN=2184 GT:DS:GL:BD 0.13324176 0
1 233669876 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.986;LDAF=0.0330;AVGPOST=0.9941;RSQ=0.9337;ERATE=0.0004;THETA=0.0001;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 233669984 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6307;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233670034 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8286;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233670123 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6746;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233670229 . C CT 157 PASS INDEL;BAVGPOST=0.998;BRSQ=0.751;LDAF=0.0036;AVGPOST=0.9989;RSQ=0.8565;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233670357 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0427;AVGPOST=0.9996;RSQ=0.9964;ERATE=0.0002;THETA=0.0004;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 233670385 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5820;AVGPOST=0.9978;RSQ=0.9968;ERATE=0.0004;THETA=0.0003;AC=1271;AN=2184 GT:DS:GL:BD 0.58195972 1
1 233670460 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.749;LDAF=0.0019;AVGPOST=0.9968;RSQ=0.3538;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233670472 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233670517 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5576;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233670529 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0060;AVGPOST=0.9990;RSQ=0.9347;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 233670694 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5815;AVGPOST=0.9982;RSQ=0.9971;ERATE=0.0004;THETA=0.0036;AC=1269;AN=2184 GT:DS:GL:BD 0.58104396 1
1 233670723 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7534;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233670743 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9905;ERATE=0.0002;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233670816 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0030;AVGPOST=0.9986;RSQ=0.8041;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233670852 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233670938 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0037;AVGPOST=0.9992;RSQ=0.9140;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233670939 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233671010 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0428;AVGPOST=0.9992;RSQ=0.9922;ERATE=0.0003;THETA=0.0002;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 233671036 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0083;AVGPOST=0.9998;RSQ=0.9897;ERATE=0.0002;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 233671047 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9535;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233671094 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9411;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233671180 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.932;LDAF=0.0156;AVGPOST=0.9964;RSQ=0.9010;ERATE=0.0002;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 233671223 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.943;LDAF=0.0428;AVGPOST=0.9992;RSQ=0.9923;ERATE=0.0002;THETA=0.0002;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 233671281 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0055;AVGPOST=0.9989;RSQ=0.9012;ERATE=0.0004;THETA=0.0026;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 233671397 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.770;LDAF=0.0130;AVGPOST=0.9910;RSQ=0.7212;ERATE=0.0006;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 233671493 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0104;AVGPOST=0.9987;RSQ=0.9527;ERATE=0.0004;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 233671526 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0020;AVGPOST=0.9978;RSQ=0.6283;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233671527 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233671545 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233671571 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.2864;AVGPOST=0.9935;RSQ=0.9885;ERATE=0.0010;THETA=0.0021;AC=623;AN=2184 GT:DS:GL:BD 0.28525642 0
1 233671611 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5548;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233671748 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.850;LDAF=0.0053;AVGPOST=0.9966;RSQ=0.7477;ERATE=0.0004;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233671805 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0017;AVGPOST=0.9986;RSQ=0.6673;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233671922 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9990;RSQ=0.9473;ERATE=0.0002;THETA=0.0036;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 233672031 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6678;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233672048 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5535;ERATE=0.0003;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233672121 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.906;LDAF=0.0112;AVGPOST=0.9971;RSQ=0.9029;ERATE=0.0002;THETA=0.0144;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 233672142 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0025;AVGPOST=0.9994;RSQ=0.9208;ERATE=0.0007;THETA=0.0040;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233672220 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0331;AVGPOST=0.9985;RSQ=0.9796;ERATE=0.0003;THETA=0.0003;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 233672282 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0110;AVGPOST=0.9996;RSQ=0.9821;ERATE=0.0003;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 233672311 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.6714;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233672326 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.1965;AVGPOST=0.9967;RSQ=0.9920;ERATE=0.0006;THETA=0.0005;AC=428;AN=2184 GT:DS:GL:BD 0.19597070 0
1 233672350 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9904;ERATE=0.0002;THETA=0.0035;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233672394 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0085;AVGPOST=0.9995;RSQ=0.9715;ERATE=0.0002;THETA=0.0019;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 233672419 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6436;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233672453 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.684;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7511;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233672622 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6719;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233672669 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0097;AVGPOST=0.9999;RSQ=0.9931;ERATE=0.0002;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 233672773 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233672813 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8377;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233672841 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7887;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233672919 . G GT 21 PASS INDEL;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233672920 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6019;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233672940 . T TC 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0025;AVGPOST=0.9972;RSQ=0.5957;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233672994 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.932;LDAF=0.0299;AVGPOST=0.9958;RSQ=0.9430;ERATE=0.0002;THETA=0.0003;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 233673009 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7702;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233673022 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0399;AVGPOST=0.9998;RSQ=0.9973;ERATE=0.0003;THETA=0.0003;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 233673224 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5647;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233673271 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0401;AVGPOST=0.9993;RSQ=0.9926;ERATE=0.0004;THETA=0.0006;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 233673389 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2879;AVGPOST=0.9969;RSQ=0.9946;ERATE=0.0005;THETA=0.0003;AC=626;AN=2184 GT:DS:GL:BD 0.28663003 0
1 233673464 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.713;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6343;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233673468 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6359;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233673470 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233673479 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233673529 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6037;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233673538 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8408;ERATE=0.0002;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233673567 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0070;AVGPOST=0.9995;RSQ=0.9686;ERATE=0.0004;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 233673659 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233673667 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233673676 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6088;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233673778 . ATCC A 16685 PASS INDEL;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0996;AVGPOST=0.9991;RSQ=0.9959;ERATE=0.0003;THETA=0.0002;AC=218;AN=2184 GT:DS:GL:BD 0.09981685 0
1 233673927 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0724;AVGPOST=0.9993;RSQ=0.9954;ERATE=0.0003;THETA=0.0004;AC=158;AN=2184 GT:DS:GL:BD 0.07234433 0
1 233674022 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233674109 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.7148;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233674115 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0031;AVGPOST=0.9985;RSQ=0.7947;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233674248 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6313;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233674267 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.767;LDAF=0.0032;AVGPOST=0.9980;RSQ=0.7592;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233674281 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0042;AVGPOST=0.9985;RSQ=0.8614;ERATE=0.0004;THETA=0.0001;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233674321 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6395;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233674423 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0023;AVGPOST=0.9972;RSQ=0.5656;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233674529 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.7233;AVGPOST=0.9965;RSQ=0.9943;ERATE=0.0004;THETA=0.0004;AC=1576;AN=2184 GT:DS:GL:BD 0.72161174 1
1 233674618 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2501;AVGPOST=0.9981;RSQ=0.9960;ERATE=0.0004;THETA=0.0005;AC=546;AN=2184 GT:DS:GL:BD 0.25000000 0
1 233674625 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.8331;AVGPOST=0.9938;RSQ=0.9829;ERATE=0.0009;THETA=0.0001;AC=1821;AN=2184 GT:DS:GL:BD 0.83379120 1
1 233674633 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0032;AVGPOST=0.9966;RSQ=0.5852;ERATE=0.0003;THETA=0.0001;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233674791 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.872;LDAF=0.0165;AVGPOST=0.9939;RSQ=0.8636;ERATE=0.0004;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 233674941 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5392;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233675112 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1133;AVGPOST=0.9983;RSQ=0.9937;ERATE=0.0005;THETA=0.0002;AC=248;AN=2184 GT:DS:GL:BD 0.11355311 0
1 233675154 . TAG T 20 PASS INDEL;BAVGPOST=0.978;BRSQ=0.085;LDAF=0.0103;AVGPOST=0.9883;RSQ=0.5304;ERATE=0.0008;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 233675253 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233675431 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7233;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233675558 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.1882;AVGPOST=0.9976;RSQ=0.9941;ERATE=0.0004;THETA=0.0001;AC=411;AN=2184 GT:DS:GL:BD 0.18818681 0
1 233675693 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7986;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233675741 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.5915;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233675811 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6899;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233675816 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7252;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233675893 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233676010 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6701;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233676013 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5423;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233676044 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.8088;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233676048 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9731;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 233676061 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6039;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233676073 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6830;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233676333 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2481;AVGPOST=0.9981;RSQ=0.9962;ERATE=0.0003;THETA=0.0002;AC=542;AN=2184 GT:DS:GL:BD 0.24816850 0
1 233676477 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233676498 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.724;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233676607 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0014;AVGPOST=0.9996;RSQ=0.8693;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233676616 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.6492;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233676668 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0020;AVGPOST=0.9990;RSQ=0.7952;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233676769 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7917;ERATE=0.0007;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233676828 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5824;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233676904 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0367;AVGPOST=0.9988;RSQ=0.9851;ERATE=0.0004;THETA=0.0002;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 233677000 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0100;AVGPOST=0.9973;RSQ=0.8903;ERATE=0.0002;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 233677161 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0068;AVGPOST=0.9997;RSQ=0.9839;ERATE=0.0002;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 233677171 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6088;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233677177 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.973;LDAF=0.0745;AVGPOST=0.9973;RSQ=0.9854;ERATE=0.0004;THETA=0.0003;AC=163;AN=2184 GT:DS:GL:BD 0.07463370 0
1 233677226 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0040;AVGPOST=0.9997;RSQ=0.9678;ERATE=0.0002;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233677271 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8505;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233677366 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8702;ERATE=0.0003;THETA=0.0042;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233677410 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.2085;AVGPOST=0.9962;RSQ=0.9915;ERATE=0.0004;THETA=0.0005;AC=453;AN=2184 GT:DS:GL:BD 0.20741758 0
1 233677456 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233677585 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0057;AVGPOST=0.9995;RSQ=0.9692;ERATE=0.0002;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 233677593 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2784;AVGPOST=0.9969;RSQ=0.9942;ERATE=0.0005;THETA=0.0002;AC=608;AN=2184 GT:DS:GL:BD 0.27838829 0
1 233677616 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2802;AVGPOST=0.9980;RSQ=0.9960;ERATE=0.0004;THETA=0.0005;AC=610;AN=2184 GT:DS:GL:BD 0.27930403 0
1 233677619 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8862;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233677642 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.828;LDAF=0.0023;AVGPOST=0.9982;RSQ=0.7290;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233677664 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.703;LDAF=0.0024;AVGPOST=0.9970;RSQ=0.5260;ERATE=0.0004;THETA=0.0024;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233677863 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233677914 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9931;ERATE=0.0002;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233677922 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0039;AVGPOST=0.9994;RSQ=0.9270;ERATE=0.0006;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233677961 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0024;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233678098 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233678183 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6620;AVGPOST=0.9987;RSQ=0.9975;ERATE=0.0003;THETA=0.0005;AC=1446;AN=2184 GT:DS:GL:BD 0.66208792 1
1 233678248 . AC A 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0013;AVGPOST=0.9981;RSQ=0.3932;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233678302 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0113;AVGPOST=0.9994;RSQ=0.9825;ERATE=0.0002;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 233678498 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233678502 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6096;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233678531 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0031;AVGPOST=0.9989;RSQ=0.8461;ERATE=0.0006;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233678591 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233678604 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0129;AVGPOST=0.9999;RSQ=0.9948;ERATE=0.0003;THETA=0.0008;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 233678607 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0055;AVGPOST=0.9989;RSQ=0.9155;ERATE=0.0004;THETA=0.0001;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 233678683 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233678752 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9998;RSQ=0.9710;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233678767 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6639;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233678785 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.6669;AVGPOST=0.9973;RSQ=0.9946;ERATE=0.0008;THETA=0.0004;AC=1457;AN=2184 GT:DS:GL:BD 0.66712457 1
1 233678805 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0325;AVGPOST=0.9995;RSQ=0.9933;ERATE=0.0002;THETA=0.0003;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 233678889 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5858;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233678932 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.768;LDAF=0.0032;AVGPOST=0.9978;RSQ=0.7223;ERATE=0.0003;THETA=0.0001;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233678960 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1761;AVGPOST=0.9996;RSQ=0.9988;ERATE=0.0003;THETA=0.0010;AC=384;AN=2184 GT:DS:GL:BD 0.17582418 0
1 233679017 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9545;ERATE=0.0002;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233679062 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0019;AVGPOST=0.9996;RSQ=0.8990;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233679121 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0528;AVGPOST=0.9991;RSQ=0.9921;ERATE=0.0004;THETA=0.0004;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 233679176 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1773;AVGPOST=0.9997;RSQ=0.9990;ERATE=0.0003;THETA=0.0002;AC=387;AN=2184 GT:DS:GL:BD 0.17719780 0
1 233679177 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0029;AVGPOST=0.9988;RSQ=0.8467;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233679236 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0007;AVGPOST=0.9991;RSQ=0.5300;ERATE=0.0002;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233679304 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5867;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233679337 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0094;AVGPOST=0.9975;RSQ=0.9028;ERATE=0.0005;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 233679354 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0027;AVGPOST=0.9994;RSQ=0.9087;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233679369 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0225;AVGPOST=0.9994;RSQ=0.9892;ERATE=0.0002;THETA=0.0002;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 233679452 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0117;AVGPOST=0.9995;RSQ=0.9793;ERATE=0.0004;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 233679466 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9535;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233679488 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.975;LDAF=0.6525;AVGPOST=0.9867;RSQ=0.9786;ERATE=0.0026;THETA=0.0003;AC=1429;AN=2184 GT:DS:GL:BD 0.65430403 1
1 233679499 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0027;AVGPOST=0.9976;RSQ=0.6313;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233679577 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9543;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233679579 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7477;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233679584 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.847;LDAF=0.0080;AVGPOST=0.9971;RSQ=0.8543;ERATE=0.0004;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 233679613 . CAT C 548 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0047;AVGPOST=0.9983;RSQ=0.8709;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 233679643 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233679714 . AC A 42 PASS INDEL;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5055;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233679789 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233679827 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5929;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233679882 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0038;AVGPOST=0.9987;RSQ=0.8599;ERATE=0.0002;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233679905 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1747;AVGPOST=0.9992;RSQ=0.9977;ERATE=0.0004;THETA=0.0002;AC=381;AN=2184 GT:DS:GL:BD 0.17445055 0
1 233679995 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233679998 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6577;AVGPOST=0.9995;RSQ=0.9989;ERATE=0.0004;THETA=0.0002;AC=1436;AN=2184 GT:DS:GL:BD 0.65750915 1
1 233680072 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7635;ERATE=0.0002;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233680106 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0648;AVGPOST=0.9999;RSQ=0.9991;ERATE=0.0002;THETA=0.0003;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 233680131 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6576;AVGPOST=0.9996;RSQ=0.9993;ERATE=0.0003;THETA=0.0001;AC=1436;AN=2184 GT:DS:GL:BD 0.65750915 1
1 233680153 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0046;AVGPOST=0.9979;RSQ=0.8069;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233680171 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233680207 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0057;AVGPOST=0.9995;RSQ=0.9795;ERATE=0.0003;THETA=0.0001;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 233680275 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6921;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233680403 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7193;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233680563 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6612;AVGPOST=0.9995;RSQ=0.9989;ERATE=0.0003;THETA=0.0002;AC=1444;AN=2184 GT:DS:GL:BD 0.66117215 1
1 233680564 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7577;ERATE=0.0004;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233680615 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0114;AVGPOST=1.0000;RSQ=0.9981;ERATE=0.0002;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 233680654 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0669;AVGPOST=0.9993;RSQ=0.9959;ERATE=0.0003;THETA=0.0003;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 233680774 . G GT 125 PASS INDEL;BAVGPOST=0.977;BRSQ=0.536;LDAF=0.0437;AVGPOST=0.9482;RSQ=0.4927;ERATE=0.0146;THETA=0.0003;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 233680789 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0667;AVGPOST=0.9996;RSQ=0.9977;ERATE=0.0003;THETA=0.0002;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 233680891 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.3724;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233680958 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1365;AVGPOST=0.9973;RSQ=0.9908;ERATE=0.0004;THETA=0.0003;AC=296;AN=2184 GT:DS:GL:BD 0.13553114 0
1 233681013 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0030;AVGPOST=0.9959;RSQ=0.4738;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233681045 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.794;LDAF=0.0039;AVGPOST=0.9977;RSQ=0.7710;ERATE=0.0002;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233681046 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7503;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233681055 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0071;AVGPOST=0.9995;RSQ=0.9666;ERATE=0.0002;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 233681056 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.8001;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233681141 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9363;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233681270 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.571;LDAF=0.0038;AVGPOST=0.9986;RSQ=0.8601;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233681301 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233681342 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.871;LDAF=0.0137;AVGPOST=0.9956;RSQ=0.8722;ERATE=0.0004;THETA=0.0002;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 233681343 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0035;AVGPOST=0.9981;RSQ=0.7891;ERATE=0.0002;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233681474 . TAAG T 250 PASS INDEL;BAVGPOST=0.999;BRSQ=0.776;LDAF=0.0093;AVGPOST=0.9921;RSQ=0.6878;ERATE=0.0005;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 233681535 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5335;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233681564 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233681659 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6707;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233681660 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0037;AVGPOST=0.9990;RSQ=0.8961;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233681711 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233681784 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7313;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233681804 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5756;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233681895 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0128;AVGPOST=0.9999;RSQ=0.9965;ERATE=0.0002;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 233681912 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1235;AVGPOST=0.9995;RSQ=0.9983;ERATE=0.0003;THETA=0.0002;AC=270;AN=2184 GT:DS:GL:BD 0.12362637 0
1 233681969 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0019;AVGPOST=0.9993;RSQ=0.8507;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233681970 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8450;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233682066 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.989;LDAF=0.1314;AVGPOST=0.9990;RSQ=0.9967;ERATE=0.0005;THETA=0.0004;AC=287;AN=2184 GT:DS:GL:BD 0.13141026 0
1 233682076 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8156;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233682080 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0128;AVGPOST=0.9998;RSQ=0.9931;ERATE=0.0002;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 233682129 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.619;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6555;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233682139 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6613;ERATE=0.0004;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233682142 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.850;LDAF=0.0037;AVGPOST=0.9973;RSQ=0.6846;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233682217 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.925;LDAF=0.0104;AVGPOST=0.9973;RSQ=0.9075;ERATE=0.0004;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 233682265 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4699;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233682327 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.821;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6380;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233682347 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6715;AVGPOST=0.9981;RSQ=0.9968;ERATE=0.0003;THETA=0.0002;AC=1465;AN=2184 GT:DS:GL:BD 0.67078757 1
1 233682353 . A AT 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6872;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233682392 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0718;AVGPOST=0.9995;RSQ=0.9969;ERATE=0.0003;THETA=0.0002;AC=157;AN=2184 GT:DS:GL:BD 0.07188645 0
1 233682402 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0550;AVGPOST=0.9995;RSQ=0.9959;ERATE=0.0003;THETA=0.0003;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 233682529 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0012;AVGPOST=0.9982;RSQ=0.4222;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233682699 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0113;AVGPOST=0.9994;RSQ=0.9809;ERATE=0.0002;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 233682793 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8939;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233683015 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0039;AVGPOST=0.9982;RSQ=0.8166;ERATE=0.0008;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233683019 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0051;AVGPOST=0.9995;RSQ=0.9576;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 233683180 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.772;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0002;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233683208 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.865;LDAF=0.0159;AVGPOST=0.9957;RSQ=0.9053;ERATE=0.0004;THETA=0.0002;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 233683263 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0512;AVGPOST=0.9998;RSQ=0.9984;ERATE=0.0003;THETA=0.0002;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 233683285 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233683298 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7577;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233683382 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233683403 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.0555;AVGPOST=0.9988;RSQ=0.9906;ERATE=0.0004;THETA=0.0003;AC=122;AN=2184 GT:DS:GL:BD 0.05586081 0
1 233683455 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233683500 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1266;AVGPOST=0.9996;RSQ=0.9986;ERATE=0.0003;THETA=0.0002;AC=277;AN=2184 GT:DS:GL:BD 0.12683150 0
1 233683509 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2156;AVGPOST=0.9996;RSQ=0.9989;ERATE=0.0003;THETA=0.0004;AC=472;AN=2184 GT:DS:GL:BD 0.21611722 0
1 233683616 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0205;AVGPOST=0.9982;RSQ=0.9695;ERATE=0.0004;THETA=0.0001;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 233683705 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0018;AVGPOST=0.9998;RSQ=0.9420;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233683740 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9255;ERATE=0.0005;THETA=0.0001;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233683775 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.730;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233683854 . AT A 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4449;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233684006 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0027;AVGPOST=0.9996;RSQ=0.9328;ERATE=0.0002;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233684015 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5861;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233684212 . G GT 89 PASS INDEL;BAVGPOST=0.997;BRSQ=0.620;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7458;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233684340 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0018;AVGPOST=0.9994;RSQ=0.8645;ERATE=0.0004;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233684352 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1359;AVGPOST=0.9993;RSQ=0.9978;ERATE=0.0002;THETA=0.0001;AC=296;AN=2184 GT:DS:GL:BD 0.13553114 0
1 233684353 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6599;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233684384 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233684429 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6707;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233684571 . TCTC T 523 PASS INDEL;BAVGPOST=0.999;BRSQ=0.792;LDAF=0.0028;AVGPOST=0.9979;RSQ=0.6934;ERATE=0.0004;THETA=0.0001;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233684606 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5743;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233684629 rs5781751 C CT 4170 PASS INDEL;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0402;AVGPOST=0.9978;RSQ=0.9771;ERATE=0.0004;THETA=0.0002;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 233684679 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9792;ERATE=0.0002;THETA=0.0001;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233684718 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9385;ERATE=0.0003;THETA=0.0001;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233684752 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.976;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9412;ERATE=0.0002;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233684755 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9351;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233684896 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.559;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7359;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233684916 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0020;AVGPOST=0.9978;RSQ=0.6429;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233684957 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7255;ERATE=0.0004;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233685119 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0121;AVGPOST=0.9996;RSQ=0.9848;ERATE=0.0003;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 233685141 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8943;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233685150 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233685391 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2150;AVGPOST=0.9993;RSQ=0.9980;ERATE=0.0004;THETA=0.0003;AC=471;AN=2184 GT:DS:GL:BD 0.21565934 0
1 233685548 rs34407726 G GA 20295 PASS INDEL;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1378;AVGPOST=0.9979;RSQ=0.9928;ERATE=0.0004;THETA=0.0003;AC=299;AN=2184 GT:DS:GL:BD 0.13690476 0
1 233685586 . G GGT 30 PASS INDEL;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6428;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233685603 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0691;AVGPOST=0.9988;RSQ=0.9934;ERATE=0.0004;THETA=0.0002;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 233685630 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6596;AVGPOST=0.9987;RSQ=0.9975;ERATE=0.0005;THETA=0.0003;AC=1440;AN=2184 GT:DS:GL:BD 0.65934068 1
1 233685686 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233685736 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.7109;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233686031 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8082;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233686047 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233686141 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233686437 . AC A 31 PASS INDEL;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7683;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233686439 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233686557 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6288;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233686742 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.773;LDAF=0.0061;AVGPOST=0.9970;RSQ=0.8181;ERATE=0.0004;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 233686801 . GGAGGCT G 67 PASS INDEL;BAVGPOST=1.000;BRSQ=0.673;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.7618;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233686843 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.559;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4901;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233686853 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.711;LDAF=0.0016;AVGPOST=0.9976;RSQ=0.3381;ERATE=0.0006;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233686888 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0394;AVGPOST=0.9951;RSQ=0.9523;ERATE=0.0006;THETA=0.0003;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 233686892 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.971;LDAF=0.0698;AVGPOST=0.9985;RSQ=0.9923;ERATE=0.0004;THETA=0.0015;AC=153;AN=2184 GT:DS:GL:BD 0.07005495 0
1 233686947 . A AAAAAAG 253 PASS INDEL;BAVGPOST=0.999;BRSQ=0.703;LDAF=0.0034;AVGPOST=0.9973;RSQ=0.6885;ERATE=0.0008;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233687005 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233687036 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9658;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233687088 . C CT 126 PASS INDEL;BAVGPOST=0.990;BRSQ=0.535;LDAF=0.0185;AVGPOST=0.9815;RSQ=0.6160;ERATE=0.0028;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 233687135 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.613;LDAF=0.0037;AVGPOST=0.9942;RSQ=0.3415;ERATE=0.0009;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233687149 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0023;AVGPOST=0.9968;RSQ=0.5378;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233687208 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0010;AVGPOST=0.9982;RSQ=0.3265;ERATE=0.0005;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 233687234 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233687235 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0671;AVGPOST=0.9984;RSQ=0.9874;ERATE=0.0005;THETA=0.0005;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 233687263 . TG T 209 PASS INDEL;BAVGPOST=0.997;BRSQ=0.588;LDAF=0.0057;AVGPOST=0.9969;RSQ=0.7829;ERATE=0.0004;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 233687287 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0039;AVGPOST=0.9992;RSQ=0.9016;ERATE=0.0004;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233687299 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7374;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233687432 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7052;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233687473 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.6682;AVGPOST=0.9983;RSQ=0.9966;ERATE=0.0005;THETA=0.0023;AC=1459;AN=2184 GT:DS:GL:BD 0.66804028 1
1 233687485 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0710;AVGPOST=0.9991;RSQ=0.9950;ERATE=0.0002;THETA=0.0004;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 233687563 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0126;AVGPOST=0.9995;RSQ=0.9837;ERATE=0.0002;THETA=0.0008;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 233687634 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1249;AVGPOST=0.9990;RSQ=0.9965;ERATE=0.0004;THETA=0.0005;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 233687847 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0045;AVGPOST=0.9972;RSQ=0.7594;ERATE=0.0003;THETA=0.0025;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233687896 rs71170426 T TA 302 PASS INDEL;BAVGPOST=0.788;BRSQ=0.228;LDAF=0.2229;AVGPOST=0.7283;RSQ=0.3502;ERATE=0.0219;THETA=0.0003;AC=297;AN=2184 GT:DS:GL:BD 0.13598901 0
1 233688050 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.847;LDAF=0.0153;AVGPOST=0.9957;RSQ=0.8847;ERATE=0.0004;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 233688063 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1521;AVGPOST=0.9982;RSQ=0.9943;ERATE=0.0004;THETA=0.0002;AC=332;AN=2184 GT:DS:GL:BD 0.15201466 0
1 233688069 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.756;LDAF=0.0003;AVGPOST=0.9995;RSQ=0.1309;ERATE=0.0003;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 233688196 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8566;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233688240 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.672;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7578;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233688241 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1405;AVGPOST=0.9982;RSQ=0.9941;ERATE=0.0003;THETA=0.0002;AC=304;AN=2184 GT:DS:GL:BD 0.13919415 0
1 233688281 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.797;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5674;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233688390 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.1298;AVGPOST=0.9968;RSQ=0.9903;ERATE=0.0010;THETA=0.0026;AC=283;AN=2184 GT:DS:GL:BD 0.12957875 0
1 233688551 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5754;ERATE=0.0002;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233688768 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.0555;AVGPOST=0.9993;RSQ=0.9942;ERATE=0.0003;THETA=0.0005;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 233688776 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6818;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233688907 . CA C 244 PASS INDEL;BAVGPOST=0.998;BRSQ=0.826;LDAF=0.0071;AVGPOST=0.9971;RSQ=0.8230;ERATE=0.0014;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 233688988 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0044;AVGPOST=0.9985;RSQ=0.8555;ERATE=0.0005;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233689023 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0041;AVGPOST=1.0000;RSQ=0.9947;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233689066 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7124;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233689081 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0029;AVGPOST=0.9994;RSQ=0.9332;ERATE=0.0002;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233689085 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0695;AVGPOST=0.9976;RSQ=0.9878;ERATE=0.0002;THETA=0.0002;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 233689105 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.827;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5789;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233689146 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.987;LDAF=0.6482;AVGPOST=0.9781;RSQ=0.9638;ERATE=0.0050;THETA=0.0002;AC=1425;AN=2184 GT:DS:GL:BD 0.65247256 1
1 233689151 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0041;AVGPOST=0.9973;RSQ=0.7688;ERATE=0.0002;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233689159 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233689192 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.7654;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233689274 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.530;LDAF=0.0142;AVGPOST=0.9820;RSQ=0.5096;ERATE=0.0055;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 233689409 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7220;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233689447 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5730;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233689475 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.748;LDAF=0.0081;AVGPOST=0.9955;RSQ=0.7751;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 233689479 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9426;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233689523 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0019;AVGPOST=0.9982;RSQ=0.6463;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233689543 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1759;AVGPOST=0.9963;RSQ=0.9900;ERATE=0.0006;THETA=0.0003;AC=385;AN=2184 GT:DS:GL:BD 0.17628205 0
1 233689597 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1597;AVGPOST=0.9980;RSQ=0.9939;ERATE=0.0004;THETA=0.0003;AC=348;AN=2184 GT:DS:GL:BD 0.15934066 0
1 233689607 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1597;AVGPOST=0.9981;RSQ=0.9942;ERATE=0.0003;THETA=0.0014;AC=348;AN=2184 GT:DS:GL:BD 0.15934066 0
1 233689608 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9988;RSQ=0.9271;ERATE=0.0004;THETA=0.0001;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 233689612 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.683;LDAF=0.0020;AVGPOST=0.9976;RSQ=0.5003;ERATE=0.0007;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233689689 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0051;AVGPOST=0.9993;RSQ=0.9358;ERATE=0.0004;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 233689771 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233689776 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0049;AVGPOST=0.9994;RSQ=0.9516;ERATE=0.0004;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 233689843 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0068;AVGPOST=0.9993;RSQ=0.9558;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 233689959 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1611;AVGPOST=0.9975;RSQ=0.9925;ERATE=0.0006;THETA=0.0002;AC=352;AN=2184 GT:DS:GL:BD 0.16117217 0
1 233690105 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1203;AVGPOST=0.9989;RSQ=0.9956;ERATE=0.0004;THETA=0.0003;AC=263;AN=2184 GT:DS:GL:BD 0.12042125 0
1 233690119 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0503;AVGPOST=0.9997;RSQ=0.9975;ERATE=0.0002;THETA=0.0002;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 233690150 . TACTC T 52 PASS INDEL;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.5053;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233690176 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8586;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233690256 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9196;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233690262 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0033;AVGPOST=0.9991;RSQ=0.9175;ERATE=0.0002;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233690270 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233690467 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0395;AVGPOST=0.9995;RSQ=0.9940;ERATE=0.0002;THETA=0.0003;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 233690499 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233690527 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8568;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233690576 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8450;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233690598 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.709;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.6543;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233690651 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1760;AVGPOST=0.9995;RSQ=0.9985;ERATE=0.0003;THETA=0.0006;AC=384;AN=2184 GT:DS:GL:BD 0.17582418 0
1 233690664 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7568;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233690709 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.760;LDAF=0.0035;AVGPOST=0.9978;RSQ=0.7371;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233690788 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5554;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233690977 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0028;AVGPOST=0.9978;RSQ=0.7016;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233691026 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.903;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9215;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233691093 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0020;AVGPOST=0.9982;RSQ=0.6691;ERATE=0.0003;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233691175 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.872;LDAF=0.0107;AVGPOST=0.9969;RSQ=0.9015;ERATE=0.0004;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 233691238 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.944;LDAF=0.0438;AVGPOST=0.9955;RSQ=0.9551;ERATE=0.0009;THETA=0.0002;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 233691278 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0387;AVGPOST=0.9985;RSQ=0.9829;ERATE=0.0004;THETA=0.0004;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 233691312 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.634;LDAF=0.0027;AVGPOST=0.9988;RSQ=0.7994;ERATE=0.0004;THETA=0.0001;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233691379 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.895;LDAF=0.0201;AVGPOST=0.9905;RSQ=0.8065;ERATE=0.0011;THETA=0.0003;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 233691396 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.942;LDAF=0.0410;AVGPOST=0.9929;RSQ=0.9311;ERATE=0.0006;THETA=0.0001;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 233691425 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1763;AVGPOST=0.9926;RSQ=0.9809;ERATE=0.0016;THETA=0.0021;AC=383;AN=2184 GT:DS:GL:BD 0.17536630 0
1 233691492 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0627;AVGPOST=0.9983;RSQ=0.9896;ERATE=0.0004;THETA=0.0005;AC=136;AN=2184 GT:DS:GL:BD 0.06227106 0
1 233691651 . GTTA G 64 PASS INDEL;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0057;AVGPOST=0.9988;RSQ=0.9176;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 233691653 . TATTAA T 1096 PASS INDEL;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0054;AVGPOST=0.9994;RSQ=0.9593;ERATE=0.0002;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 233691677 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0093;AVGPOST=0.9997;RSQ=0.9833;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 233691787 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9995;RSQ=0.9692;ERATE=0.0003;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 233691850 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8468;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233691932 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233692034 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233692223 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0131;AVGPOST=0.9977;RSQ=0.9419;ERATE=0.0003;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 233692251 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0096;AVGPOST=0.9990;RSQ=0.9529;ERATE=0.0004;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 233692288 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0036;AVGPOST=0.9989;RSQ=0.8971;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233692301 rs10690333 G GTGCA 17434 PASS INDEL;BAVGPOST=0.983;BRSQ=0.946;LDAF=0.1782;AVGPOST=0.9925;RSQ=0.9788;ERATE=0.0008;THETA=0.0002;AC=392;AN=2184 GT:DS:GL:BD 0.17948718 0
1 233692370 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0038;AVGPOST=0.9953;RSQ=0.5749;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233692407 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7343;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233692447 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.873;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7608;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233692462 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5045;ERATE=0.0004;THETA=0.0053;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233692500 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1385;AVGPOST=0.9979;RSQ=0.9938;ERATE=0.0003;THETA=0.0003;AC=299;AN=2184 GT:DS:GL:BD 0.13690476 0
1 233692582 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0066;AVGPOST=0.9993;RSQ=0.9591;ERATE=0.0002;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 233692588 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6620;AVGPOST=0.9973;RSQ=0.9947;ERATE=0.0004;THETA=0.0004;AC=1445;AN=2184 GT:DS:GL:BD 0.66163003 1
1 233692714 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9995;RSQ=0.9649;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 233692803 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.9958;AVGPOST=0.9981;RSQ=0.8366;ERATE=0.0004;THETA=0.0002;AC=2177;AN=2184 GT:DS:GL:BD 0.99679488 1
1 233692916 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.988;LDAF=0.0460;AVGPOST=0.9983;RSQ=0.9850;ERATE=0.0003;THETA=0.0004;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 233692963 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.926;LDAF=0.0212;AVGPOST=0.9966;RSQ=0.9387;ERATE=0.0003;THETA=0.0032;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 233692996 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0038;AVGPOST=0.9992;RSQ=0.9118;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233693042 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1564;AVGPOST=0.9969;RSQ=0.9909;ERATE=0.0004;THETA=0.0016;AC=340;AN=2184 GT:DS:GL:BD 0.15567766 0
1 233693200 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9998;RSQ=0.9875;ERATE=0.0002;THETA=0.0012;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 233693205 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.803;LDAF=0.0019;AVGPOST=0.9977;RSQ=0.5731;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233693207 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0178;AVGPOST=0.9990;RSQ=0.9804;ERATE=0.0002;THETA=0.0076;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 233693215 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5420;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233693317 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.784;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5224;ERATE=0.0004;THETA=0.0026;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233693372 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0056;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233693435 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.721;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6540;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233693586 . CTA C 182 PASS INDEL;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7297;ERATE=0.0007;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233693638 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.777;LDAF=0.0034;AVGPOST=0.9970;RSQ=0.6682;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233693659 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7604;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233693744 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0101;AVGPOST=0.9987;RSQ=0.9487;ERATE=0.0004;THETA=0.0071;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 233693822 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6850;ERATE=0.0003;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233693835 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7042;ERATE=0.0003;THETA=0.0055;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233693861 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.0516;AVGPOST=0.9980;RSQ=0.9850;ERATE=0.0004;THETA=0.0006;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 233693882 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0122;AVGPOST=0.9991;RSQ=0.9727;ERATE=0.0003;THETA=0.0011;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 233693962 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0070;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233693996 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0036;AVGPOST=0.9993;RSQ=0.9212;ERATE=0.0014;THETA=0.0042;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233694037 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0059;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233694256 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233694342 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7987;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233694401 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3346;AVGPOST=0.9941;RSQ=0.9911;ERATE=0.0008;THETA=0.0004;AC=729;AN=2184 GT:DS:GL:BD 0.33379120 0
1 233694567 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9282;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233694623 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.983;LDAF=0.1594;AVGPOST=0.9956;RSQ=0.9879;ERATE=0.0004;THETA=0.0004;AC=350;AN=2184 GT:DS:GL:BD 0.16025642 0
1 233694711 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6495;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233694870 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3356;AVGPOST=0.9977;RSQ=0.9961;ERATE=0.0006;THETA=0.0004;AC=730;AN=2184 GT:DS:GL:BD 0.33424908 0
1 233694922 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0005;THETA=0.0022;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233694930 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0041;AVGPOST=0.9981;RSQ=0.8153;ERATE=0.0003;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233694967 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6918;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233695101 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.886;LDAF=0.8800;AVGPOST=0.9544;RSQ=0.8409;ERATE=0.0072;THETA=0.0003;AC=1949;AN=2184 GT:DS:GL:BD 0.89239925 1
1 233695102 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.960;LDAF=0.5776;AVGPOST=0.9543;RSQ=0.9349;ERATE=0.0104;THETA=0.0002;AC=1271;AN=2184 GT:DS:GL:BD 0.58195972 1
1 233695237 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.734;LDAF=0.0028;AVGPOST=0.9974;RSQ=0.6229;ERATE=0.0010;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233695238 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.982;LDAF=0.1132;AVGPOST=0.9986;RSQ=0.9946;ERATE=0.0004;THETA=0.0013;AC=248;AN=2184 GT:DS:GL:BD 0.11355311 0
1 233695256 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233695333 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233695362 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0023;AVGPOST=0.9982;RSQ=0.7163;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233695394 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.3391;AVGPOST=0.9968;RSQ=0.9955;ERATE=0.0006;THETA=0.0002;AC=739;AN=2184 GT:DS:GL:BD 0.33836997 0
1 233695524 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233695545 rs11348752 GT G 7932 PASS INDEL;BAVGPOST=0.993;BRSQ=0.981;LDAF=0.1227;AVGPOST=0.9948;RSQ=0.9818;ERATE=0.0009;THETA=0.0003;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 233695620 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.5254;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233695762 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8136;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233695815 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0033;AVGPOST=0.9987;RSQ=0.8363;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233695822 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0238;AVGPOST=0.9989;RSQ=0.9793;ERATE=0.0004;THETA=0.0011;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 233695825 . AT A 200 PASS INDEL;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0088;AVGPOST=0.9939;RSQ=0.7522;ERATE=0.0007;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 233695904 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3486;AVGPOST=0.9986;RSQ=0.9975;ERATE=0.0004;THETA=0.0007;AC=759;AN=2184 GT:DS:GL:BD 0.34752747 0
1 233695913 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0303;AVGPOST=0.9983;RSQ=0.9756;ERATE=0.0003;THETA=0.0005;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 233695924 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8269;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233696250 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.978;LDAF=0.0468;AVGPOST=0.9959;RSQ=0.9653;ERATE=0.0003;THETA=0.0003;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 233696321 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.649;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6764;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233696343 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8450;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233696417 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8683;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233696483 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.9073;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233696491 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3489;AVGPOST=0.9981;RSQ=0.9970;ERATE=0.0004;THETA=0.0024;AC=760;AN=2184 GT:DS:GL:BD 0.34798536 0
1 233696506 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6714;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233696557 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4279;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233696562 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5505;AVGPOST=0.9982;RSQ=0.9969;ERATE=0.0004;THETA=0.0004;AC=1203;AN=2184 GT:DS:GL:BD 0.55082417 1
1 233696577 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.848;LDAF=0.0055;AVGPOST=0.9972;RSQ=0.8030;ERATE=0.0004;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 233696588 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5570;AVGPOST=0.9989;RSQ=0.9979;ERATE=0.0003;THETA=0.0003;AC=1216;AN=2184 GT:DS:GL:BD 0.55677658 1
1 233696634 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5643;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233696680 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.690;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233696705 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0302;AVGPOST=0.9990;RSQ=0.9876;ERATE=0.0002;THETA=0.0001;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 233696732 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0481;AVGPOST=0.9993;RSQ=0.9936;ERATE=0.0003;THETA=0.0003;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 233696745 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1142;AVGPOST=0.9983;RSQ=0.9941;ERATE=0.0003;THETA=0.0002;AC=249;AN=2184 GT:DS:GL:BD 0.11401099 0
1 233696812 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6711;AVGPOST=0.9984;RSQ=0.9972;ERATE=0.0004;THETA=0.0001;AC=1465;AN=2184 GT:DS:GL:BD 0.67078757 1
1 233696838 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233696843 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233697089 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6875;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233697107 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1520;AVGPOST=0.9989;RSQ=0.9962;ERATE=0.0005;THETA=0.0004;AC=332;AN=2184 GT:DS:GL:BD 0.15201466 0
1 233697156 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.736;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7669;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233697225 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9799;ERATE=0.0002;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233697345 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8061;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233697354 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6917;ERATE=0.0007;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233697433 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0059;AVGPOST=0.9993;RSQ=0.9556;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 233697530 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1149;AVGPOST=0.9965;RSQ=0.9878;ERATE=0.0006;THETA=0.0002;AC=248;AN=2184 GT:DS:GL:BD 0.11355311 0
1 233697693 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9125;AVGPOST=0.9992;RSQ=0.9955;ERATE=0.0003;THETA=0.0002;AC=1993;AN=2184 GT:DS:GL:BD 0.91254580 1
1 233697783 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8847;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233697812 . TG T 35 PASS INDEL;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.6258;ERATE=0.0005;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233697873 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.888;LDAF=0.0120;AVGPOST=0.9973;RSQ=0.9189;ERATE=0.0003;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 233697895 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.5050;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233697926 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.1098;AVGPOST=0.9975;RSQ=0.9905;ERATE=0.0005;THETA=0.0002;AC=240;AN=2184 GT:DS:GL:BD 0.10989011 0
1 233697950 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7576;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233698070 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5188;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233698256 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.963;LDAF=0.0395;AVGPOST=0.9995;RSQ=0.9943;ERATE=0.0003;THETA=0.0004;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 233698308 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9381;ERATE=0.0002;THETA=0.0001;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233698316 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0400;AVGPOST=0.9986;RSQ=0.9878;ERATE=0.0003;THETA=0.0004;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 233698445 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.0820;AVGPOST=0.9988;RSQ=0.9937;ERATE=0.0003;THETA=0.0004;AC=180;AN=2184 GT:DS:GL:BD 0.08241758 0
1 233698517 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0029;AVGPOST=0.9979;RSQ=0.7522;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233698522 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1142;AVGPOST=0.9991;RSQ=0.9963;ERATE=0.0004;THETA=0.0003;AC=249;AN=2184 GT:DS:GL:BD 0.11401099 0
1 233698556 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0036;AVGPOST=0.9968;RSQ=0.6949;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 233698574 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3483;AVGPOST=0.9988;RSQ=0.9977;ERATE=0.0004;THETA=0.0003;AC=759;AN=2184 GT:DS:GL:BD 0.34752747 0
1 233698674 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.0171;AVGPOST=0.9994;RSQ=0.9843;ERATE=0.0003;THETA=0.0002;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 233698886 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6913;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233698905 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6293;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233698965 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9215;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233698992 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6447;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233699021 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0053;AVGPOST=0.9985;RSQ=0.9020;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 233699022 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.8007;ERATE=0.0002;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233699138 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.8123;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233699251 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4485;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233699400 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0026;AVGPOST=0.9973;RSQ=0.6438;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233699498 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0025;AVGPOST=0.9967;RSQ=0.5164;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233699504 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.836;LDAF=0.0024;AVGPOST=0.9983;RSQ=0.7262;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233699565 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5229;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233699617 . G GA 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.716;LDAF=0.0011;AVGPOST=0.9984;RSQ=0.3653;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233699729 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5448;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233699742 . T TA 56 PASS INDEL;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0050;AVGPOST=0.9985;RSQ=0.8762;ERATE=0.0005;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 233699743 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0027;AVGPOST=0.9988;RSQ=0.8215;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233699772 rs59754734 CTATA C 36256 PASS INDEL;BAVGPOST=0.987;BRSQ=0.977;LDAF=0.3365;AVGPOST=0.9895;RSQ=0.9826;ERATE=0.0023;THETA=0.0005;AC=735;AN=2184 GT:DS:GL:BD 0.33653846 0
1 233699917 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.716;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6583;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233700003 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.775;LDAF=0.0035;AVGPOST=0.9980;RSQ=0.8062;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233700068 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0256;AVGPOST=0.9988;RSQ=0.9819;ERATE=0.0002;THETA=0.0004;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 233700197 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.736;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7705;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233700199 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6760;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233700230 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.898;LDAF=0.0031;AVGPOST=0.9991;RSQ=0.8737;ERATE=0.0002;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233700237 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9125;AVGPOST=0.9996;RSQ=0.9976;ERATE=0.0003;THETA=0.0007;AC=1993;AN=2184 GT:DS:GL:BD 0.91254580 1
1 233700298 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0085;AVGPOST=0.9990;RSQ=0.9532;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 233700299 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0047;AVGPOST=0.9982;RSQ=0.8486;ERATE=0.0005;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 233700303 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0030;AVGPOST=0.9987;RSQ=0.8261;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233700334 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0018;AVGPOST=0.9987;RSQ=0.6989;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233700423 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0025;AVGPOST=0.9990;RSQ=0.8327;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233700437 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233700479 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233700482 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0045;AVGPOST=0.9999;RSQ=0.9908;ERATE=0.0002;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 233700515 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.708;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8495;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233700533 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9341;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233700534 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233700592 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9700;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233700712 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1151;AVGPOST=0.9962;RSQ=0.9860;ERATE=0.0007;THETA=0.0002;AC=249;AN=2184 GT:DS:GL:BD 0.11401099 0
1 233700752 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7811;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233700789 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0396;AVGPOST=0.9968;RSQ=0.9693;ERATE=0.0004;THETA=0.0004;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 233700822 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.972;LDAF=0.0651;AVGPOST=0.9933;RSQ=0.9573;ERATE=0.0004;THETA=0.0004;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 233700843 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.911;LDAF=0.0309;AVGPOST=0.9961;RSQ=0.9566;ERATE=0.0004;THETA=0.0002;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 233700891 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.862;LDAF=0.0049;AVGPOST=0.9982;RSQ=0.8612;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 233700933 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6511;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233701049 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0069;AVGPOST=0.9992;RSQ=0.9577;ERATE=0.0003;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 233701165 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0019;AVGPOST=0.9977;RSQ=0.5422;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233701191 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0049;AVGPOST=0.9987;RSQ=0.9000;ERATE=0.0002;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 233701197 . TA T 119 PASS INDEL;BAVGPOST=0.998;BRSQ=0.877;LDAF=0.0032;AVGPOST=0.9962;RSQ=0.5573;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233701296 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3521;AVGPOST=0.9987;RSQ=0.9976;ERATE=0.0005;THETA=0.0002;AC=767;AN=2184 GT:DS:GL:BD 0.35119048 0
1 233701381 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3511;AVGPOST=0.9987;RSQ=0.9977;ERATE=0.0004;THETA=0.0001;AC=765;AN=2184 GT:DS:GL:BD 0.35027471 0
1 233701421 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.4639;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233701598 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6288;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233701661 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.979;LDAF=0.0415;AVGPOST=0.9986;RSQ=0.9887;ERATE=0.0002;THETA=0.0003;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 233701785 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.645;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5165;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233701788 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8611;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233701790 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0034;AVGPOST=0.9997;RSQ=0.9545;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233701853 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.601;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4664;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233701874 . GT G 6 PASS INDEL;BAVGPOST=0.999;BRSQ=0.640;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4147;ERATE=0.0007;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233701970 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0517;AVGPOST=0.9997;RSQ=0.9972;ERATE=0.0003;THETA=0.0009;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 233701973 . A AT 212 PASS INDEL;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7543;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233701975 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.953;LDAF=0.0125;AVGPOST=0.9986;RSQ=0.9491;ERATE=0.0003;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 233701985 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3359;AVGPOST=0.9972;RSQ=0.9954;ERATE=0.0004;THETA=0.0003;AC=734;AN=2184 GT:DS:GL:BD 0.33608058 0
1 233702030 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9125;AVGPOST=0.9993;RSQ=0.9962;ERATE=0.0003;THETA=0.0002;AC=1993;AN=2184 GT:DS:GL:BD 0.91254580 1
1 233702094 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.845;LDAF=0.0066;AVGPOST=0.9967;RSQ=0.8204;ERATE=0.0007;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 233702138 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4610;AVGPOST=0.9984;RSQ=0.9972;ERATE=0.0005;THETA=0.0004;AC=1006;AN=2184 GT:DS:GL:BD 0.46062270 0
1 233702163 . T TA 66 PASS INDEL;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6314;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233702173 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.812;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8147;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233702220 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0064;AVGPOST=0.9969;RSQ=0.8309;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 233702246 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0295;AVGPOST=0.9990;RSQ=0.9851;ERATE=0.0002;THETA=0.0002;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 233702273 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.963;LDAF=0.0293;AVGPOST=0.9995;RSQ=0.9922;ERATE=0.0003;THETA=0.0003;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 233702330 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6088;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233702483 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0231;AVGPOST=0.9987;RSQ=0.9806;ERATE=0.0002;THETA=0.0003;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 233702499 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.982;LDAF=0.1749;AVGPOST=0.9935;RSQ=0.9809;ERATE=0.0004;THETA=0.0004;AC=382;AN=2184 GT:DS:GL:BD 0.17490843 0
1 233702647 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.756;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6460;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233702660 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7999;ERATE=0.0003;THETA=0.0027;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233702661 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0041;AVGPOST=0.9984;RSQ=0.8304;ERATE=0.0004;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233702755 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6362;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233702798 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.792;LDAF=0.0025;AVGPOST=0.9990;RSQ=0.8363;ERATE=0.0002;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233702901 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.836;LDAF=0.0025;AVGPOST=0.9989;RSQ=0.8417;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233702914 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6529;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233702971 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0049;AVGPOST=0.9981;RSQ=0.8649;ERATE=0.0002;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 233703050 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.695;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9353;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233703066 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233703083 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.804;LDAF=0.0022;AVGPOST=0.9982;RSQ=0.6579;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233703088 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0027;AVGPOST=0.9997;RSQ=0.9548;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233703095 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233703197 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0050;AVGPOST=0.9984;RSQ=0.8907;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 233703219 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0020;AVGPOST=0.9990;RSQ=0.7930;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233703344 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0106;AVGPOST=0.9988;RSQ=0.9571;ERATE=0.0004;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 233703420 . C CG 18 PASS INDEL;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233703544 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233703630 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233703692 . CT C 73 PASS INDEL;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4786;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233703729 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.7058;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233703736 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0036;AVGPOST=0.9996;RSQ=0.9586;ERATE=0.0002;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233703787 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3509;AVGPOST=0.9952;RSQ=0.9928;ERATE=0.0009;THETA=0.0002;AC=764;AN=2184 GT:DS:GL:BD 0.34981686 0
1 233703934 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8292;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233704024 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233704114 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233704131 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3398;AVGPOST=0.9989;RSQ=0.9980;ERATE=0.0004;THETA=0.0007;AC=742;AN=2184 GT:DS:GL:BD 0.33974358 0
1 233704216 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233704323 . A AGT 6013 PASS INDEL;BAVGPOST=0.988;BRSQ=0.944;LDAF=0.1120;AVGPOST=0.9928;RSQ=0.9717;ERATE=0.0008;THETA=0.0014;AC=246;AN=2184 GT:DS:GL:BD 0.11263736 0
1 233704331 . G GTTA 12736 PASS INDEL;BAVGPOST=0.989;BRSQ=0.949;LDAF=0.1126;AVGPOST=0.9903;RSQ=0.9641;ERATE=0.0014;THETA=0.0005;AC=245;AN=2184 GT:DS:GL:BD 0.11217949 0
1 233704347 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0023;AVGPOST=0.9995;RSQ=0.8976;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233704410 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7805;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233704673 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.0848;AVGPOST=0.9970;RSQ=0.9844;ERATE=0.0005;THETA=0.0009;AC=184;AN=2184 GT:DS:GL:BD 0.08424909 0
1 233704809 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7075;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233704837 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0022;AVGPOST=0.9989;RSQ=0.7637;ERATE=0.0003;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233704996 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0069;AVGPOST=0.9984;RSQ=0.9009;ERATE=0.0004;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 233705001 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.8227;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233705040 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5620;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233705048 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233705062 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6159;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233705073 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0034;AVGPOST=0.9962;RSQ=0.5557;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233705230 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0059;AVGPOST=0.9993;RSQ=0.9506;ERATE=0.0002;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 233705364 . T TG 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4859;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233705403 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5792;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233705456 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5107;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233705477 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.979;LDAF=0.3430;AVGPOST=0.9872;RSQ=0.9809;ERATE=0.0021;THETA=0.0003;AC=750;AN=2184 GT:DS:GL:BD 0.34340659 0
1 233705483 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0396;AVGPOST=0.9985;RSQ=0.9838;ERATE=0.0003;THETA=0.0003;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 233705603 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.889;LDAF=0.0051;AVGPOST=0.9988;RSQ=0.9143;ERATE=0.0002;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 233705666 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.915;LDAF=0.0059;AVGPOST=0.9983;RSQ=0.8937;ERATE=0.0002;THETA=0.0011;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 233705685 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0004;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233705731 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.9094;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233705738 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233705802 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8116;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233706199 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0064;AVGPOST=0.9979;RSQ=0.8639;ERATE=0.0003;THETA=0.0014;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 233706255 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0064;AVGPOST=0.9990;RSQ=0.9381;ERATE=0.0003;THETA=0.0009;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 233706422 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9882;ERATE=0.0002;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233706529 . CA C 2669 PASS INDEL;BAVGPOST=0.634;BRSQ=0.289;LDAF=0.4102;AVGPOST=0.6692;RSQ=0.3774;ERATE=0.1154;THETA=0.0004;AC=761;AN=2184 GT:DS:GL:BD 0.34844321 0
1 233706530 rs34851570 AT A 57070 PASS INDEL;BAVGPOST=0.995;BRSQ=0.759;LDAF=0.9867;AVGPOST=0.9870;RSQ=0.6015;ERATE=0.0024;THETA=0.0004;AC=2165;AN=2184 GT:DS:GL:BD 0.99130034 1
1 233706578 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.983;LDAF=0.3265;AVGPOST=0.9909;RSQ=0.9843;ERATE=0.0009;THETA=0.0022;AC=712;AN=2184 GT:DS:GL:BD 0.32600734 0
1 233706605 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.896;LDAF=0.0104;AVGPOST=0.9976;RSQ=0.9101;ERATE=0.0003;THETA=0.0018;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 233706666 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.6346;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233706897 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7635;ERATE=0.0003;THETA=0.0023;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233706949 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9545;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233706997 . C CG 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6545;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233707022 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.953;LDAF=0.0265;AVGPOST=0.9953;RSQ=0.9353;ERATE=0.0004;THETA=0.0013;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 233707053 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6913;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233707104 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.812;LDAF=0.0018;AVGPOST=0.9985;RSQ=0.6600;ERATE=0.0004;THETA=0.0066;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233707105 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233707109 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0284;AVGPOST=0.9997;RSQ=0.9957;ERATE=0.0002;THETA=0.0004;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 233707163 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233707266 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0027;AVGPOST=0.9993;RSQ=0.8810;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233707284 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0284;AVGPOST=0.9997;RSQ=0.9958;ERATE=0.0003;THETA=0.0014;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 233707306 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.816;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233707436 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0042;AVGPOST=0.9987;RSQ=0.9008;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233707439 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6289;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233707486 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0029;AVGPOST=0.9998;RSQ=0.9626;ERATE=0.0002;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233707644 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.686;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8321;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233707681 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.804;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233707742 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0028;AVGPOST=0.9979;RSQ=0.6975;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233707821 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.979;LDAF=0.1853;AVGPOST=0.9907;RSQ=0.9765;ERATE=0.0008;THETA=0.0029;AC=404;AN=2184 GT:DS:GL:BD 0.18498169 0
1 233707900 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.6035;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233707904 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0032;AVGPOST=0.9992;RSQ=0.8771;ERATE=0.0004;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233708006 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.771;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7845;ERATE=0.0002;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233708191 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5046;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233708271 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9496;ERATE=0.0003;THETA=0.0066;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233708310 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.985;LDAF=0.3195;AVGPOST=0.9876;RSQ=0.9798;ERATE=0.0003;THETA=0.0025;AC=693;AN=2184 GT:DS:GL:BD 0.31730768 0
1 233708450 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9207;ERATE=0.0003;THETA=0.0118;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233708468 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4815;ERATE=0.0004;THETA=0.0041;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233708605 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.956;LDAF=0.5388;AVGPOST=0.9660;RSQ=0.9496;ERATE=0.0015;THETA=0.0426;AC=1174;AN=2184 GT:DS:GL:BD 0.53754580 1
1 233708844 . CCA C 119 PASS INDEL;BAVGPOST=0.980;BRSQ=0.551;LDAF=0.0506;AVGPOST=0.9310;RSQ=0.3986;ERATE=0.0101;THETA=0.0181;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 233708889 . TTCCCCTCCCCTCCCC T 102 PASS INDEL;BAVGPOST=0.876;BRSQ=0.024;LDAF=0.1594;AVGPOST=0.7508;RSQ=0.2304;ERATE=0.0156;THETA=0.0058;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 233708891 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.845;BRSQ=0.620;LDAF=0.2495;AVGPOST=0.8056;RSQ=0.5920;ERATE=0.0204;THETA=0.0074;AC=442;AN=2184 GT:DS:GL:BD 0.20238096 0
1 233708932 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.964;BRSQ=0.736;LDAF=0.0756;AVGPOST=0.9473;RSQ=0.7372;ERATE=0.0024;THETA=0.0030;AC=144;AN=2184 GT:DS:GL:BD 0.06593407 0
1 233708936 . CCCCTT C 1103 PASS INDEL;BAVGPOST=0.933;BRSQ=0.479;LDAF=0.1080;AVGPOST=0.8619;RSQ=0.4215;ERATE=0.0078;THETA=0.0030;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 233708941 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.940;BRSQ=0.516;LDAF=0.0758;AVGPOST=0.9183;RSQ=0.5483;ERATE=0.0041;THETA=0.0124;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 233709078 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.812;LDAF=0.0272;AVGPOST=0.9890;RSQ=0.8520;ERATE=0.0009;THETA=0.0112;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 233709105 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.958;LDAF=0.0681;AVGPOST=0.9926;RSQ=0.9628;ERATE=0.0004;THETA=0.0128;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 233709151 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.569;LDAF=0.0032;AVGPOST=0.9954;RSQ=0.4033;ERATE=0.0009;THETA=0.0085;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233709191 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.668;LDAF=0.0021;AVGPOST=0.9968;RSQ=0.3205;ERATE=0.0005;THETA=0.0141;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233709200 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.910;BRSQ=0.853;LDAF=0.3641;AVGPOST=0.9060;RSQ=0.8656;ERATE=0.0021;THETA=0.0162;AC=786;AN=2184 GT:DS:GL:BD 0.35989010 0
1 233709201 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.911;BRSQ=0.804;LDAF=0.7566;AVGPOST=0.9177;RSQ=0.8293;ERATE=0.0050;THETA=0.0105;AC=1684;AN=2184 GT:DS:GL:BD 0.77106225 1
1 233709448 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0039;AVGPOST=0.9986;RSQ=0.8626;ERATE=0.0004;THETA=0.0607;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233709522 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.959;BRSQ=0.931;LDAF=0.4047;AVGPOST=0.9500;RSQ=0.9265;ERATE=0.0058;THETA=0.0137;AC=873;AN=2184 GT:DS:GL:BD 0.39972529 0
1 233709545 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0168;AVGPOST=0.9993;RSQ=0.9829;ERATE=0.0003;THETA=0.0073;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 233709641 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.732;LDAF=0.0023;AVGPOST=0.9975;RSQ=0.5480;ERATE=0.0009;THETA=0.0119;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233709698 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6141;ERATE=0.0004;THETA=0.0147;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233709744 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0089;AVGPOST=0.9995;RSQ=0.9762;ERATE=0.0002;THETA=0.0088;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 233709891 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6553;ERATE=0.0003;THETA=0.0079;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233709955 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0662;AVGPOST=0.9964;RSQ=0.9783;ERATE=0.0005;THETA=0.0042;AC=144;AN=2184 GT:DS:GL:BD 0.06593407 0
1 233710005 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.862;LDAF=0.0019;AVGPOST=0.9993;RSQ=0.8375;ERATE=0.0003;THETA=0.0083;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233710043 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.981;LDAF=0.0707;AVGPOST=0.9955;RSQ=0.9747;ERATE=0.0003;THETA=0.0080;AC=153;AN=2184 GT:DS:GL:BD 0.07005495 0
1 233710046 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8535;ERATE=0.0004;THETA=0.0069;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233710076 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0003;THETA=0.0082;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233710161 . ATGGACATT A 176 PASS INDEL;BAVGPOST=0.999;BRSQ=0.610;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5060;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233710165 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233710195 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6136;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233710269 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0783;AVGPOST=0.9968;RSQ=0.9844;ERATE=0.0003;THETA=0.0024;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 233710477 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0022;AVGPOST=0.9996;RSQ=0.9262;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233710481 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0165;AVGPOST=0.9997;RSQ=0.9920;ERATE=0.0002;THETA=0.0012;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 233710581 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0512;AVGPOST=0.9992;RSQ=0.9933;ERATE=0.0003;THETA=0.0007;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 233710614 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0515;AVGPOST=0.9991;RSQ=0.9928;ERATE=0.0004;THETA=0.0007;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 233710667 . A AT 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.756;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0005;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233710686 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233710706 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0048;AVGPOST=0.9994;RSQ=0.9442;ERATE=0.0003;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 233710721 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.989;LDAF=0.4998;AVGPOST=0.9859;RSQ=0.9794;ERATE=0.0033;THETA=0.0002;AC=1097;AN=2184 GT:DS:GL:BD 0.50228935 1
1 233710769 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0024;AVGPOST=0.9990;RSQ=0.8135;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233710775 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.684;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.5659;ERATE=0.0004;THETA=0.0028;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233710832 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.841;LDAF=0.0048;AVGPOST=0.9978;RSQ=0.8159;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233710900 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.691;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4788;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233710908 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.544;LDAF=0.9696;AVGPOST=0.9580;RSQ=0.4714;ERATE=0.0058;THETA=0.0010;AC=2142;AN=2184 GT:DS:GL:BD 0.98076922 1
1 233710997 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.0830;AVGPOST=0.9979;RSQ=0.9901;ERATE=0.0003;THETA=0.0002;AC=181;AN=2184 GT:DS:GL:BD 0.08287546 0
1 233711010 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.9885;AVGPOST=0.9989;RSQ=0.9564;ERATE=0.0003;THETA=0.0004;AC=2160;AN=2184 GT:DS:GL:BD 0.98901099 1
1 233711014 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0018;AVGPOST=0.9986;RSQ=0.7195;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233711107 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.741;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.4725;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233711116 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0024;AVGPOST=0.9973;RSQ=0.6029;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233711129 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7959;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233711197 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0032;AVGPOST=0.9986;RSQ=0.8194;ERATE=0.0004;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233711213 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233711217 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7227;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233711232 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.5067;AVGPOST=0.9946;RSQ=0.9925;ERATE=0.0013;THETA=0.0003;AC=1109;AN=2184 GT:DS:GL:BD 0.50778389 1
1 233711233 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0060;AVGPOST=1.0000;RSQ=0.9963;ERATE=0.0002;THETA=0.0013;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 233711249 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.0831;AVGPOST=0.9979;RSQ=0.9920;ERATE=0.0004;THETA=0.0003;AC=183;AN=2184 GT:DS:GL:BD 0.08379121 0
1 233711320 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0002;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233711413 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.775;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8640;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233711421 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0023;AVGPOST=0.9998;RSQ=0.9628;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233711443 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0843;AVGPOST=0.9985;RSQ=0.9946;ERATE=0.0002;THETA=0.0003;AC=183;AN=2184 GT:DS:GL:BD 0.08379121 0
1 233711508 . A AG 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.764;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5858;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233711509 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233711614 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0142;AVGPOST=0.9981;RSQ=0.9479;ERATE=0.0005;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 233711722 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5709;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233711791 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233711825 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233711836 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.785;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7494;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233711872 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.774;LDAF=0.0040;AVGPOST=0.9987;RSQ=0.8774;ERATE=0.0002;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233711970 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6190;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233711993 . CACTT C 22 PASS INDEL;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5451;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233712006 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0855;AVGPOST=0.9969;RSQ=0.9881;ERATE=0.0005;THETA=0.0007;AC=185;AN=2184 GT:DS:GL:BD 0.08470696 0
1 233712050 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6723;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233712108 . AC A 19 PASS INDEL;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.7053;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233712109 . CA C 189 PASS INDEL;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0030;AVGPOST=0.9979;RSQ=0.7302;ERATE=0.0011;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233712180 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7415;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233712225 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4800;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233712225 . G GA 150 PASS INDEL;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0022;AVGPOST=0.9974;RSQ=0.4811;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233712264 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.763;LDAF=0.0071;AVGPOST=0.9959;RSQ=0.7642;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 233712265 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.829;LDAF=0.0213;AVGPOST=0.9949;RSQ=0.9023;ERATE=0.0004;THETA=0.0005;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 233712280 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.825;LDAF=0.0030;AVGPOST=0.9982;RSQ=0.7409;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233712301 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6582;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233712365 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0026;AVGPOST=0.9984;RSQ=0.7679;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233712454 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0024;AVGPOST=0.9985;RSQ=0.7247;ERATE=0.0004;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233712482 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.4933;AVGPOST=0.9966;RSQ=0.9952;ERATE=0.0007;THETA=0.0002;AC=1081;AN=2184 GT:DS:GL:BD 0.49496338 0
1 233712544 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0191;AVGPOST=0.9993;RSQ=0.9866;ERATE=0.0003;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 233712570 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9048;AVGPOST=0.9996;RSQ=0.9983;ERATE=0.0003;THETA=0.0009;AC=1976;AN=2184 GT:DS:GL:BD 0.90476191 1
1 233712770 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0189;AVGPOST=0.9997;RSQ=0.9928;ERATE=0.0002;THETA=0.0002;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 233712797 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4428;AVGPOST=0.9970;RSQ=0.9948;ERATE=0.0005;THETA=0.0006;AC=969;AN=2184 GT:DS:GL:BD 0.44368133 0
1 233712800 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233712806 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0654;AVGPOST=0.9999;RSQ=0.9991;ERATE=0.0002;THETA=0.0002;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 233712847 . T TG 56 PASS INDEL;BAVGPOST=0.998;BRSQ=0.809;LDAF=0.0019;AVGPOST=0.9983;RSQ=0.7207;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233713048 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0846;AVGPOST=0.9990;RSQ=0.9957;ERATE=0.0004;THETA=0.0005;AC=184;AN=2184 GT:DS:GL:BD 0.08424909 0
1 233713112 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0061;AVGPOST=0.9996;RSQ=0.9730;ERATE=0.0003;THETA=0.0021;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 233713131 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7297;ERATE=0.0004;THETA=0.0026;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233713132 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5993;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233713417 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0192;AVGPOST=0.9990;RSQ=0.9771;ERATE=0.0004;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 233713458 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7334;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233713503 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0654;AVGPOST=0.9999;RSQ=0.9991;ERATE=0.0002;THETA=0.0006;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 233713577 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0187;AVGPOST=0.9995;RSQ=0.9867;ERATE=0.0003;THETA=0.0005;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 233713598 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.818;LDAF=0.0084;AVGPOST=0.9969;RSQ=0.8768;ERATE=0.0002;THETA=0.0011;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 233713631 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233713685 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6225;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233713753 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0232;AVGPOST=0.9988;RSQ=0.9796;ERATE=0.0003;THETA=0.0004;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 233713968 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6942;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233713992 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.550;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6116;ERATE=0.0004;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233714033 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0072;AVGPOST=0.9975;RSQ=0.8571;ERATE=0.0004;THETA=0.0013;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 233714041 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.0863;AVGPOST=0.9984;RSQ=0.9926;ERATE=0.0004;THETA=0.0006;AC=188;AN=2184 GT:DS:GL:BD 0.08608059 0
1 233714056 . TA T 7429 PASS INDEL;BAVGPOST=0.995;BRSQ=0.972;LDAF=0.0855;AVGPOST=0.9914;RSQ=0.9564;ERATE=0.0018;THETA=0.0002;AC=183;AN=2184 GT:DS:GL:BD 0.08379121 0
1 233714118 . C CT 78 PASS INDEL;BAVGPOST=0.997;BRSQ=0.719;LDAF=0.0043;AVGPOST=0.9954;RSQ=0.6053;ERATE=0.0006;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233714146 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.980;LDAF=0.0181;AVGPOST=0.9988;RSQ=0.9779;ERATE=0.0002;THETA=0.0006;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 233714185 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7727;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233714236 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5857;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233714368 . GT G 119 PASS INDEL;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9189;ERATE=0.0003;THETA=0.0011;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233714652 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0189;AVGPOST=0.9996;RSQ=0.9898;ERATE=0.0004;THETA=0.0002;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 233714931 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2313;AVGPOST=0.9962;RSQ=0.9918;ERATE=0.0005;THETA=0.0003;AC=504;AN=2184 GT:DS:GL:BD 0.23076923 0
1 233714944 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8818;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233715081 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5954;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233715096 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0026;AVGPOST=0.9974;RSQ=0.6280;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233715133 . CT C 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0015;AVGPOST=0.9982;RSQ=0.4878;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233715170 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0220;AVGPOST=0.9999;RSQ=0.9973;ERATE=0.0002;THETA=0.0005;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 233715191 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0188;AVGPOST=0.9998;RSQ=0.9954;ERATE=0.0003;THETA=0.0003;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 233715231 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0843;AVGPOST=0.9996;RSQ=0.9980;ERATE=0.0003;THETA=0.0004;AC=184;AN=2184 GT:DS:GL:BD 0.08424909 0
1 233715273 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233715296 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7621;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233715371 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8466;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233715391 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9357;ERATE=0.0002;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233715404 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0652;AVGPOST=0.9984;RSQ=0.9893;ERATE=0.0004;THETA=0.0003;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 233715485 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5491;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233715572 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.989;LDAF=0.4870;AVGPOST=0.9944;RSQ=0.9910;ERATE=0.0005;THETA=0.0004;AC=1063;AN=2184 GT:DS:GL:BD 0.48672161 0
1 233715614 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233715829 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7441;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233715830 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6075;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233715979 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0175;AVGPOST=0.9990;RSQ=0.9763;ERATE=0.0004;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 233716025 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0200;AVGPOST=0.9988;RSQ=0.9773;ERATE=0.0003;THETA=0.0003;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 233716046 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.8757;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233716119 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5687;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233716122 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.777;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233716208 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233716212 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0840;AVGPOST=0.9995;RSQ=0.9977;ERATE=0.0003;THETA=0.0004;AC=184;AN=2184 GT:DS:GL:BD 0.08424909 0
1 233716255 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0048;AVGPOST=0.9996;RSQ=0.9616;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 233716275 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8998;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233716302 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0053;AVGPOST=0.9992;RSQ=0.9416;ERATE=0.0002;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 233716375 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0188;AVGPOST=0.9998;RSQ=0.9954;ERATE=0.0003;THETA=0.0006;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 233716393 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233716446 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.939;LDAF=0.0319;AVGPOST=0.9953;RSQ=0.9475;ERATE=0.0003;THETA=0.0025;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 233716668 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233716678 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233716694 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1131;AVGPOST=0.9992;RSQ=0.9969;ERATE=0.0003;THETA=0.0002;AC=245;AN=2184 GT:DS:GL:BD 0.11217949 0
1 233716744 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7558;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233716893 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233717079 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8584;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233717168 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1191;AVGPOST=0.9990;RSQ=0.9960;ERATE=0.0002;THETA=0.0003;AC=260;AN=2184 GT:DS:GL:BD 0.11904762 0
1 233717224 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.6352;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233717259 . T TA 9341 PASS INDEL;BAVGPOST=0.992;BRSQ=0.962;LDAF=0.1013;AVGPOST=0.9919;RSQ=0.9696;ERATE=0.0007;THETA=0.0003;AC=218;AN=2184 GT:DS:GL:BD 0.09981685 0
1 233717293 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0021;AVGPOST=0.9989;RSQ=0.7917;ERATE=0.0002;THETA=0.0001;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233717294 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5346;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233717306 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0040;AVGPOST=0.9990;RSQ=0.8881;ERATE=0.0008;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233717450 . GATAA G 2408 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0164;AVGPOST=0.9986;RSQ=0.9616;ERATE=0.0003;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 233717527 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233717528 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2320;AVGPOST=0.9982;RSQ=0.9960;ERATE=0.0004;THETA=0.0002;AC=505;AN=2184 GT:DS:GL:BD 0.23122710 0
1 233717556 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.0977;AVGPOST=0.9984;RSQ=0.9938;ERATE=0.0003;THETA=0.0060;AC=214;AN=2184 GT:DS:GL:BD 0.09798535 0
1 233717641 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233717649 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.871;LDAF=0.0067;AVGPOST=0.9971;RSQ=0.8452;ERATE=0.0006;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 233717732 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.762;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233717736 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0022;AVGPOST=0.9995;RSQ=0.9226;ERATE=0.0003;THETA=0.0001;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233717752 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0059;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 233717763 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9216;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233717767 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0830;AVGPOST=0.9983;RSQ=0.9916;ERATE=0.0005;THETA=0.0029;AC=181;AN=2184 GT:DS:GL:BD 0.08287546 0
1 233717820 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.2335;AVGPOST=0.9979;RSQ=0.9951;ERATE=0.0008;THETA=0.0004;AC=508;AN=2184 GT:DS:GL:BD 0.23260073 0
1 233717875 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7196;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233717882 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.982;LDAF=0.0973;AVGPOST=0.9952;RSQ=0.9812;ERATE=0.0007;THETA=0.0024;AC=212;AN=2184 GT:DS:GL:BD 0.09706960 0
1 233717943 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.985;LDAF=0.2396;AVGPOST=0.9928;RSQ=0.9850;ERATE=0.0012;THETA=0.0011;AC=519;AN=2184 GT:DS:GL:BD 0.23763736 0
1 233717958 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0093;AVGPOST=0.9992;RSQ=0.9648;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 233718152 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.5429;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233718172 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0663;AVGPOST=0.9976;RSQ=0.9870;ERATE=0.0005;THETA=0.0043;AC=144;AN=2184 GT:DS:GL:BD 0.06593407 0
1 233718296 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.2038;AVGPOST=0.9984;RSQ=0.9956;ERATE=0.0008;THETA=0.0006;AC=447;AN=2184 GT:DS:GL:BD 0.20467032 0
1 233718301 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.7295;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233718371 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0155;AVGPOST=0.9993;RSQ=0.9792;ERATE=0.0002;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 233718392 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0002;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233718449 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7612;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233718534 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233718633 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0165;AVGPOST=0.9996;RSQ=0.9894;ERATE=0.0003;THETA=0.0040;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 233718651 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0964;AVGPOST=0.9984;RSQ=0.9932;ERATE=0.0004;THETA=0.0002;AC=212;AN=2184 GT:DS:GL:BD 0.09706960 0
1 233718667 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7374;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233718742 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6525;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233718753 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1614;AVGPOST=0.9986;RSQ=0.9956;ERATE=0.0003;THETA=0.0003;AC=351;AN=2184 GT:DS:GL:BD 0.16071428 0
1 233718784 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1004;AVGPOST=0.9986;RSQ=0.9946;ERATE=0.0004;THETA=0.0007;AC=219;AN=2184 GT:DS:GL:BD 0.10027473 0
1 233718817 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.903;LDAF=0.0059;AVGPOST=0.9991;RSQ=0.9342;ERATE=0.0003;THETA=0.0001;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 233718832 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2015;AVGPOST=0.9989;RSQ=0.9977;ERATE=0.0003;THETA=0.0002;AC=440;AN=2184 GT:DS:GL:BD 0.20146520 0
1 233718911 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233718970 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6869;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233719011 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8096;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233719026 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4603;AVGPOST=0.9972;RSQ=0.9958;ERATE=0.0005;THETA=0.0002;AC=1003;AN=2184 GT:DS:GL:BD 0.45924908 0
1 233719063 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.4698;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233719111 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233719137 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4886;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233719209 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9513;ERATE=0.0002;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233719275 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.9988;AVGPOST=0.9988;RSQ=0.5894;ERATE=0.0003;THETA=0.0002;AC=2182;AN=2184 GT:DS:GL:BD 0.99908423 1
1 233719285 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5727;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233719356 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0420;AVGPOST=0.9998;RSQ=0.9981;ERATE=0.0002;THETA=0.0004;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 233719472 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233719475 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0421;AVGPOST=0.9997;RSQ=0.9972;ERATE=0.0003;THETA=0.0005;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 233719603 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.5803;AVGPOST=0.9911;RSQ=0.9873;ERATE=0.0023;THETA=0.0001;AC=1263;AN=2184 GT:DS:GL:BD 0.57829672 1
1 233719752 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7303;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233719867 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233719886 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0443;AVGPOST=0.9991;RSQ=0.9916;ERATE=0.0004;THETA=0.0002;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 233719900 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0033;AVGPOST=0.9987;RSQ=0.8637;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233719901 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.7905;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233719917 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0810;AVGPOST=0.9997;RSQ=0.9984;ERATE=0.0002;THETA=0.0001;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 233719984 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.1172;AVGPOST=0.9993;RSQ=0.9969;ERATE=0.0004;THETA=0.0001;AC=256;AN=2184 GT:DS:GL:BD 0.11721612 0
1 233720017 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8539;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233720121 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0022;AVGPOST=0.9978;RSQ=0.6642;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233720135 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6550;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233720186 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6944;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233720212 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6915;ERATE=0.0002;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233720214 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6063;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233720289 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.805;LDAF=0.0022;AVGPOST=0.9989;RSQ=0.8619;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233720306 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.980;LDAF=0.0364;AVGPOST=0.9970;RSQ=0.9704;ERATE=0.0004;THETA=0.0002;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 233720343 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0213;AVGPOST=0.9992;RSQ=0.9820;ERATE=0.0003;THETA=0.0002;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 233720405 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0106;AVGPOST=0.9996;RSQ=0.9867;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 233720407 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8674;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233720457 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0046;AVGPOST=0.9995;RSQ=0.9556;ERATE=0.0002;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 233720494 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.992;LDAF=0.4580;AVGPOST=0.9919;RSQ=0.9882;ERATE=0.0018;THETA=0.0003;AC=995;AN=2184 GT:DS:GL:BD 0.45558608 0
1 233720569 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.985;LDAF=0.6023;AVGPOST=0.9923;RSQ=0.9862;ERATE=0.0016;THETA=0.0003;AC=1315;AN=2184 GT:DS:GL:BD 0.60210621 1
1 233720573 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6925;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233720659 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0226;AVGPOST=0.9991;RSQ=0.9851;ERATE=0.0003;THETA=0.0003;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 233720756 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.892;LDAF=0.0259;AVGPOST=0.9970;RSQ=0.9517;ERATE=0.0004;THETA=0.0002;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 233720808 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0163;AVGPOST=0.9995;RSQ=0.9904;ERATE=0.0002;THETA=0.0002;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 233720923 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7862;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233720939 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.802;LDAF=0.0068;AVGPOST=0.9968;RSQ=0.8107;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 233721114 . CT C 423 PASS INDEL;BAVGPOST=0.998;BRSQ=0.807;LDAF=0.0066;AVGPOST=0.9973;RSQ=0.8462;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 233721193 . GA G 98 PASS INDEL;BAVGPOST=1.000;BRSQ=0.719;LDAF=0.0015;AVGPOST=0.9978;RSQ=0.3839;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233721292 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.0995;AVGPOST=0.9987;RSQ=0.9943;ERATE=0.0004;THETA=0.0003;AC=218;AN=2184 GT:DS:GL:BD 0.09981685 0
1 233721303 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.716;LDAF=0.0031;AVGPOST=0.9969;RSQ=0.5993;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233721336 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6010;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233721351 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0040;AVGPOST=0.9985;RSQ=0.8313;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233721392 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.846;LDAF=0.0040;AVGPOST=0.9991;RSQ=0.9000;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233721444 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1011;AVGPOST=0.9969;RSQ=0.9894;ERATE=0.0004;THETA=0.0002;AC=221;AN=2184 GT:DS:GL:BD 0.10119048 0
1 233721509 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6228;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233721609 . TAATC T 100 PASS INDEL;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5993;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233721631 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.903;LDAF=0.9955;AVGPOST=0.9992;RSQ=0.9207;ERATE=0.0003;THETA=0.0002;AC=2175;AN=2184 GT:DS:GL:BD 0.99587911 1
1 233721642 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0023;AVGPOST=0.9977;RSQ=0.6365;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233721749 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9289;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233721791 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5375;ERATE=0.0002;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233721984 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0041;AVGPOST=0.9972;RSQ=0.8016;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233722017 . TAA T 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.5034;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233722023 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0168;AVGPOST=0.9988;RSQ=0.9716;ERATE=0.0005;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 233722059 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7447;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233722181 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6621;AVGPOST=0.9977;RSQ=0.9964;ERATE=0.0004;THETA=0.0001;AC=1443;AN=2184 GT:DS:GL:BD 0.66071427 1
1 233722212 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5142;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233722213 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.813;LDAF=0.0032;AVGPOST=0.9997;RSQ=0.9612;ERATE=0.0003;THETA=0.0001;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233722310 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7880;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233722445 . A AG 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0002;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233722486 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2011;AVGPOST=0.9997;RSQ=0.9993;ERATE=0.0003;THETA=0.0001;AC=440;AN=2184 GT:DS:GL:BD 0.20146520 0
1 233722495 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0076;AVGPOST=0.9984;RSQ=0.9275;ERATE=0.0003;THETA=0.0001;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 233722554 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1002;AVGPOST=0.9997;RSQ=0.9985;ERATE=0.0002;THETA=0.0003;AC=219;AN=2184 GT:DS:GL:BD 0.10027473 0
1 233722645 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233722659 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233722679 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4778;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233722696 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2012;AVGPOST=0.9993;RSQ=0.9984;ERATE=0.0004;THETA=0.0005;AC=440;AN=2184 GT:DS:GL:BD 0.20146520 0
1 233722781 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0131;AVGPOST=0.9989;RSQ=0.9642;ERATE=0.0008;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 233722839 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8894;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233722913 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6657;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233722941 . TA T 240 PASS INDEL;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0052;AVGPOST=0.9985;RSQ=0.8660;ERATE=0.0004;THETA=0.0001;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 233722946 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2016;AVGPOST=0.9984;RSQ=0.9969;ERATE=0.0006;THETA=0.0003;AC=440;AN=2184 GT:DS:GL:BD 0.20146520 0
1 233723033 . A AC 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5980;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233723037 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.968;LDAF=0.0221;AVGPOST=0.9961;RSQ=0.9379;ERATE=0.0008;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 233723042 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.925;LDAF=0.0654;AVGPOST=0.9902;RSQ=0.9423;ERATE=0.0004;THETA=0.0007;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 233723112 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.3444;AVGPOST=0.9980;RSQ=0.9963;ERATE=0.0005;THETA=0.0030;AC=753;AN=2184 GT:DS:GL:BD 0.34478021 0
1 233723180 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7149;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233723218 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5959;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233723353 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0107;AVGPOST=0.9995;RSQ=0.9788;ERATE=0.0002;THETA=0.0001;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 233723370 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.6622;AVGPOST=0.9974;RSQ=0.9955;ERATE=0.0006;THETA=0.0004;AC=1444;AN=2184 GT:DS:GL:BD 0.66117215 1
1 233723474 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6386;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233723512 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8878;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233723625 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2002;AVGPOST=0.9987;RSQ=0.9975;ERATE=0.0004;THETA=0.0001;AC=439;AN=2184 GT:DS:GL:BD 0.20100732 0
1 233723638 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2006;AVGPOST=0.9992;RSQ=0.9981;ERATE=0.0003;THETA=0.0002;AC=439;AN=2184 GT:DS:GL:BD 0.20100732 0
1 233723643 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0043;AVGPOST=0.9991;RSQ=0.9129;ERATE=0.0002;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233723690 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8523;ERATE=0.0002;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233723886 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233723957 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7432;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233724063 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.866;LDAF=0.0062;AVGPOST=0.9993;RSQ=0.9501;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 233724087 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0031;AVGPOST=0.9977;RSQ=0.7671;ERATE=0.0003;THETA=0.0042;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233724102 . GCA G 59 PASS INDEL;BAVGPOST=1.000;BRSQ=0.717;LDAF=0.0059;AVGPOST=0.9956;RSQ=0.7112;ERATE=0.0006;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 233724207 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0030;AVGPOST=0.9984;RSQ=0.7999;ERATE=0.0002;THETA=0.0016;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233724219 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.965;LDAF=0.0213;AVGPOST=0.9990;RSQ=0.9813;ERATE=0.0003;THETA=0.0003;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 233724239 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4603;ERATE=0.0005;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233724449 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0255;AVGPOST=0.9994;RSQ=0.9890;ERATE=0.0004;THETA=0.0004;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 233724520 . A AAAAAAAAG 78021 PASS INDEL;BAVGPOST=0.876;BRSQ=0.717;LDAF=0.6774;AVGPOST=0.8191;RSQ=0.6739;ERATE=0.0859;THETA=0.0004;AC=1581;AN=2184 GT:DS:GL:BD 0.72390109 1
1 233724629 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0031;AVGPOST=0.9984;RSQ=0.7914;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233724765 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.988;LDAF=0.1651;AVGPOST=0.9955;RSQ=0.9883;ERATE=0.0009;THETA=0.0002;AC=360;AN=2184 GT:DS:GL:BD 0.16483517 0
1 233724786 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.736;LDAF=0.0019;AVGPOST=0.9973;RSQ=0.3114;ERATE=0.0008;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233724886 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.828;LDAF=0.0114;AVGPOST=0.9953;RSQ=0.8391;ERATE=0.0005;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 233725016 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6426;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233725067 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8916;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233725077 . G GC 20 PASS INDEL;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8259;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233725096 . TA T 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0029;AVGPOST=0.9973;RSQ=0.6733;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233725100 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0811;AVGPOST=0.9994;RSQ=0.9965;ERATE=0.0003;THETA=0.0003;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 233725116 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0199;AVGPOST=0.9973;RSQ=0.9558;ERATE=0.0004;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 233725214 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0030;AVGPOST=0.9987;RSQ=0.8407;ERATE=0.0005;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233725286 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7698;ERATE=0.0004;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233725304 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.945;LDAF=0.0279;AVGPOST=0.9942;RSQ=0.9392;ERATE=0.0004;THETA=0.0002;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 233725411 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.774;LDAF=0.0016;AVGPOST=0.9988;RSQ=0.6911;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233725531 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233725542 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9659;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233725591 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0811;AVGPOST=0.9996;RSQ=0.9977;ERATE=0.0003;THETA=0.0005;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 233725593 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0410;AVGPOST=0.9977;RSQ=0.9814;ERATE=0.0003;THETA=0.0005;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 233725682 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7608;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233725708 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233725922 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0051;AVGPOST=0.9983;RSQ=0.8671;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 233725982 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7309;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233725988 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233726087 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8453;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233726120 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6008;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233726127 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6342;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233726137 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0428;AVGPOST=0.9992;RSQ=0.9922;ERATE=0.0003;THETA=0.0003;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 233726359 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7009;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233726376 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233726397 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0815;AVGPOST=0.9987;RSQ=0.9926;ERATE=0.0003;THETA=0.0003;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 233726419 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.7147;ERATE=0.0002;THETA=0.0042;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233726674 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6217;AVGPOST=0.9976;RSQ=0.9957;ERATE=0.0006;THETA=0.0004;AC=1357;AN=2184 GT:DS:GL:BD 0.62133700 1
1 233726828 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0155;AVGPOST=0.9997;RSQ=0.9909;ERATE=0.0002;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 233726940 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233726963 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7855;ERATE=0.0004;THETA=0.0001;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233727007 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1624;AVGPOST=0.9975;RSQ=0.9924;ERATE=0.0004;THETA=0.0005;AC=352;AN=2184 GT:DS:GL:BD 0.16117217 0
1 233727019 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.8361;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233727030 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0096;AVGPOST=0.9999;RSQ=0.9960;ERATE=0.0002;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 233727039 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.686;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233727076 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0057;AVGPOST=0.9988;RSQ=0.9149;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 233727135 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7452;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233727155 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0022;AVGPOST=0.9986;RSQ=0.7168;ERATE=0.0005;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233727174 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6432;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233727178 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1044;AVGPOST=0.9994;RSQ=0.9977;ERATE=0.0003;THETA=0.0002;AC=228;AN=2184 GT:DS:GL:BD 0.10439561 0
1 233727253 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0036;AVGPOST=0.9978;RSQ=0.7881;ERATE=0.0007;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233727314 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8338;ERATE=0.0002;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233727379 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.896;LDAF=0.0092;AVGPOST=0.9974;RSQ=0.8956;ERATE=0.0004;THETA=0.0001;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 233727390 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0427;AVGPOST=0.9995;RSQ=0.9953;ERATE=0.0003;THETA=0.0002;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 233727412 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.816;LDAF=0.0019;AVGPOST=0.9994;RSQ=0.8624;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233727414 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6259;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233727572 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7045;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233727654 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0096;AVGPOST=0.9999;RSQ=0.9958;ERATE=0.0002;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 233727686 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7194;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233727691 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233727724 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5624;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233727946 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6206;AVGPOST=0.9987;RSQ=0.9976;ERATE=0.0003;THETA=0.0003;AC=1354;AN=2184 GT:DS:GL:BD 0.61996335 1
1 233728001 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1049;AVGPOST=0.9985;RSQ=0.9956;ERATE=0.0002;THETA=0.0002;AC=228;AN=2184 GT:DS:GL:BD 0.10439561 0
1 233728171 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2302;AVGPOST=0.9987;RSQ=0.9969;ERATE=0.0003;THETA=0.0002;AC=501;AN=2184 GT:DS:GL:BD 0.22939560 0
1 233728203 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.764;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5878;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233728208 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5251;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233728280 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.8085;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233728298 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0077;AVGPOST=0.9971;RSQ=0.8636;ERATE=0.0003;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 233728362 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5844;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233728391 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.903;LDAF=0.0077;AVGPOST=0.9963;RSQ=0.8223;ERATE=0.0003;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 233728594 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0418;AVGPOST=0.9987;RSQ=0.9885;ERATE=0.0003;THETA=0.0003;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 233728599 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5081;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233728631 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.753;LDAF=0.0029;AVGPOST=0.9980;RSQ=0.7398;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233728633 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3258;AVGPOST=0.9946;RSQ=0.9913;ERATE=0.0004;THETA=0.0002;AC=710;AN=2184 GT:DS:GL:BD 0.32509157 0
1 233728663 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.592;LDAF=0.0076;AVGPOST=0.9907;RSQ=0.5287;ERATE=0.0019;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 233728665 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233728698 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5179;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233728841 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6075;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233728856 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0889;AVGPOST=0.9991;RSQ=0.9952;ERATE=0.0004;THETA=0.0002;AC=194;AN=2184 GT:DS:GL:BD 0.08882784 0
1 233728907 . TGGG T 35 PASS INDEL;BAVGPOST=1.000;BRSQ=0.773;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.6717;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233728932 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6639;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233728974 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0040;AVGPOST=0.9989;RSQ=0.8903;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233729007 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.614;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5940;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233729026 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.958;LDAF=0.0040;AVGPOST=0.9992;RSQ=0.9342;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233729030 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.837;LDAF=0.0078;AVGPOST=0.9983;RSQ=0.9085;ERATE=0.0004;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 233729072 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6607;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233729124 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8608;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233729125 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6400;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233729255 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0420;AVGPOST=0.9999;RSQ=0.9991;ERATE=0.0002;THETA=0.0008;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 233729350 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1041;AVGPOST=0.9993;RSQ=0.9969;ERATE=0.0004;THETA=0.0004;AC=228;AN=2184 GT:DS:GL:BD 0.10439561 0
1 233729354 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0002;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233729390 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0175;AVGPOST=0.9997;RSQ=0.9923;ERATE=0.0003;THETA=0.0001;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 233729426 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233729437 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.965;LDAF=0.1161;AVGPOST=0.9965;RSQ=0.9866;ERATE=0.0004;THETA=0.0002;AC=252;AN=2184 GT:DS:GL:BD 0.11538462 0
1 233729439 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1430;AVGPOST=0.9993;RSQ=0.9976;ERATE=0.0003;THETA=0.0002;AC=313;AN=2184 GT:DS:GL:BD 0.14331502 0
1 233729446 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3393;AVGPOST=0.9978;RSQ=0.9961;ERATE=0.0004;THETA=0.0002;AC=741;AN=2184 GT:DS:GL:BD 0.33928570 0
1 233729449 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0110;AVGPOST=0.9980;RSQ=0.9402;ERATE=0.0003;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 233729577 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233729625 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.6475;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233729843 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4281;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233729852 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2460;AVGPOST=0.9976;RSQ=0.9948;ERATE=0.0005;THETA=0.0005;AC=539;AN=2184 GT:DS:GL:BD 0.24679486 0
1 233729867 . AG A 270 PASS INDEL;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0038;AVGPOST=0.9992;RSQ=0.9065;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233729920 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2293;AVGPOST=0.9970;RSQ=0.9937;ERATE=0.0004;THETA=0.0003;AC=499;AN=2184 GT:DS:GL:BD 0.22847985 0
1 233729938 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0176;AVGPOST=0.9996;RSQ=0.9897;ERATE=0.0002;THETA=0.0002;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 233729960 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2457;AVGPOST=0.9945;RSQ=0.9897;ERATE=0.0004;THETA=0.0002;AC=536;AN=2184 GT:DS:GL:BD 0.24542125 0
1 233729968 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.5684;AVGPOST=0.9919;RSQ=0.9887;ERATE=0.0008;THETA=0.0015;AC=1239;AN=2184 GT:DS:GL:BD 0.56730771 1
1 233730031 . CT C 7 PASS INDEL;BAVGPOST=0.999;BRSQ=0.586;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.5730;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233730033 rs71574875 TAGTC T 19063 PASS INDEL;BAVGPOST=0.993;BRSQ=0.984;LDAF=0.1642;AVGPOST=0.9894;RSQ=0.9709;ERATE=0.0006;THETA=0.0002;AC=354;AN=2184 GT:DS:GL:BD 0.16208792 0
1 233730073 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.2794;AVGPOST=0.9945;RSQ=0.9887;ERATE=0.0006;THETA=0.0003;AC=609;AN=2184 GT:DS:GL:BD 0.27884614 0
1 233730090 . C CAT 24698 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2463;AVGPOST=0.9960;RSQ=0.9917;ERATE=0.0004;THETA=0.0010;AC=539;AN=2184 GT:DS:GL:BD 0.24679486 0
1 233730117 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.734;LDAF=0.0043;AVGPOST=0.9979;RSQ=0.7945;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233730124 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0043;AVGPOST=0.9978;RSQ=0.7962;ERATE=0.0004;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233730138 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.976;LDAF=0.0471;AVGPOST=0.9970;RSQ=0.9791;ERATE=0.0004;THETA=0.0002;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 233730159 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.756;LDAF=0.0044;AVGPOST=0.9933;RSQ=0.4246;ERATE=0.0011;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233730170 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.923;BRSQ=0.842;LDAF=0.3157;AVGPOST=0.9380;RSQ=0.8898;ERATE=0.0039;THETA=0.0006;AC=706;AN=2184 GT:DS:GL:BD 0.32326007 0
1 233730174 . T TA 8744 PASS INDEL;BAVGPOST=0.926;BRSQ=0.772;LDAF=0.2060;AVGPOST=0.9510;RSQ=0.8937;ERATE=0.0010;THETA=0.0006;AC=460;AN=2184 GT:DS:GL:BD 0.21062271 0
1 233730184 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.906;BRSQ=0.681;LDAF=0.1973;AVGPOST=0.8752;RSQ=0.6909;ERATE=0.0199;THETA=0.0006;AC=407;AN=2184 GT:DS:GL:BD 0.18635531 0
1 233730204 . TAC T 4714 PASS INDEL;BAVGPOST=0.913;BRSQ=0.590;LDAF=0.1522;AVGPOST=0.8660;RSQ=0.5810;ERATE=0.0186;THETA=0.0003;AC=252;AN=2184 GT:DS:GL:BD 0.11538462 0
1 233730237 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.943;BRSQ=0.761;LDAF=0.1700;AVGPOST=0.8911;RSQ=0.6788;ERATE=0.0223;THETA=0.0005;AC=313;AN=2184 GT:DS:GL:BD 0.14331502 0
1 233730243 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.665;LDAF=0.0193;AVGPOST=0.9860;RSQ=0.7195;ERATE=0.0010;THETA=0.0002;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 233730245 . TA T 3038 PASS INDEL;BAVGPOST=0.970;BRSQ=0.797;LDAF=0.0965;AVGPOST=0.9563;RSQ=0.7908;ERATE=0.0060;THETA=0.0007;AC=188;AN=2184 GT:DS:GL:BD 0.08608059 0
1 233730259 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.896;BRSQ=0.729;LDAF=0.2698;AVGPOST=0.8063;RSQ=0.6241;ERATE=0.0324;THETA=0.0011;AC=469;AN=2184 GT:DS:GL:BD 0.21474358 0
1 233730263 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.952;BRSQ=0.862;LDAF=0.2250;AVGPOST=0.9089;RSQ=0.8021;ERATE=0.0098;THETA=0.0003;AC=462;AN=2184 GT:DS:GL:BD 0.21153846 0
1 233730272 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.962;BRSQ=0.888;LDAF=0.2053;AVGPOST=0.9232;RSQ=0.8252;ERATE=0.0064;THETA=0.0021;AC=419;AN=2184 GT:DS:GL:BD 0.19184981 0
1 233730294 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.927;BRSQ=0.844;LDAF=0.5950;AVGPOST=0.7684;RSQ=0.6095;ERATE=0.0340;THETA=0.0005;AC=1379;AN=2184 GT:DS:GL:BD 0.63141024 1
1 233730298 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.861;LDAF=0.1676;AVGPOST=0.8872;RSQ=0.6809;ERATE=0.0082;THETA=0.0005;AC=288;AN=2184 GT:DS:GL:BD 0.13186814 0
1 233730304 . GTA G 82 PASS INDEL;BAVGPOST=0.965;BRSQ=0.126;LDAF=0.0415;AVGPOST=0.9370;RSQ=0.3718;ERATE=0.0037;THETA=0.0006;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 233730307 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.886;LDAF=0.1471;AVGPOST=0.9287;RSQ=0.7779;ERATE=0.0038;THETA=0.0003;AC=279;AN=2184 GT:DS:GL:BD 0.12774725 0
1 233730339 . GTA G 121 PASS INDEL;BAVGPOST=0.878;BRSQ=0.046;LDAF=0.1026;AVGPOST=0.8494;RSQ=0.3549;ERATE=0.0067;THETA=0.0005;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 233730350 . TA T 93 PASS INDEL;BAVGPOST=0.839;BRSQ=0.047;LDAF=0.1641;AVGPOST=0.7684;RSQ=0.3058;ERATE=0.0181;THETA=0.0005;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 233730364 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.686;BRSQ=0.433;LDAF=0.4694;AVGPOST=0.6719;RSQ=0.3984;ERATE=0.0463;THETA=0.0005;AC=947;AN=2184 GT:DS:GL:BD 0.43360806 0
1 233730368 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.840;BRSQ=0.306;LDAF=0.1954;AVGPOST=0.8045;RSQ=0.5102;ERATE=0.0163;THETA=0.0002;AC=315;AN=2184 GT:DS:GL:BD 0.14423077 0
1 233730377 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.878;BRSQ=0.333;LDAF=0.1556;AVGPOST=0.8070;RSQ=0.4313;ERATE=0.0112;THETA=0.0004;AC=237;AN=2184 GT:DS:GL:BD 0.10851648 0
1 233730385 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.951;BRSQ=0.806;LDAF=0.1528;AVGPOST=0.9414;RSQ=0.8299;ERATE=0.0029;THETA=0.0004;AC=317;AN=2184 GT:DS:GL:BD 0.14514652 0
1 233730385 . TA T 143 PASS INDEL;BAVGPOST=0.963;BRSQ=0.162;LDAF=0.0442;AVGPOST=0.9534;RSQ=0.5889;ERATE=0.0020;THETA=0.0003;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 233730399 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.764;BRSQ=0.388;LDAF=0.2950;AVGPOST=0.7283;RSQ=0.4123;ERATE=0.0490;THETA=0.0002;AC=455;AN=2184 GT:DS:GL:BD 0.20833333 0
1 233730409 . GTA G 1904 PASS INDEL;BAVGPOST=0.727;BRSQ=0.075;LDAF=0.7593;AVGPOST=0.6869;RSQ=0.2924;ERATE=0.0200;THETA=0.0022;AC=1830;AN=2184 GT:DS:GL:BD 0.83791208 1
1 233730420 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.1466;AVGPOST=0.9834;RSQ=0.9536;ERATE=0.0007;THETA=0.0003;AC=316;AN=2184 GT:DS:GL:BD 0.14468865 0
1 233730434 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.952;BRSQ=0.684;LDAF=0.0922;AVGPOST=0.9285;RSQ=0.6682;ERATE=0.0050;THETA=0.0004;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 233730444 . G GTA 4572 PASS INDEL;BAVGPOST=0.981;BRSQ=0.895;LDAF=0.0973;AVGPOST=0.9807;RSQ=0.9120;ERATE=0.0024;THETA=0.0004;AC=209;AN=2184 GT:DS:GL:BD 0.09569597 0
1 233730476 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.694;LDAF=0.0141;AVGPOST=0.9883;RSQ=0.7158;ERATE=0.0007;THETA=0.0017;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 233730503 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0029;AVGPOST=0.9981;RSQ=0.7461;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233730503 . TAC T 154 PASS INDEL;BAVGPOST=0.999;BRSQ=0.604;LDAF=0.0098;AVGPOST=0.9888;RSQ=0.5619;ERATE=0.0008;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 233730505 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.894;LDAF=0.1014;AVGPOST=0.9863;RSQ=0.9429;ERATE=0.0009;THETA=0.0001;AC=222;AN=2184 GT:DS:GL:BD 0.10164835 0
1 233730509 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.944;LDAF=0.6444;AVGPOST=0.9345;RSQ=0.8864;ERATE=0.0082;THETA=0.0005;AC=1420;AN=2184 GT:DS:GL:BD 0.65018314 1
1 233730590 . GTA G 35 PASS INDEL;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0052;AVGPOST=0.9928;RSQ=0.4496;ERATE=0.0008;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233730611 . TAC T 2338 PASS INDEL;BAVGPOST=0.953;BRSQ=0.681;LDAF=0.0809;AVGPOST=0.9704;RSQ=0.8679;ERATE=0.0012;THETA=0.0002;AC=189;AN=2184 GT:DS:GL:BD 0.08653846 0
1 233730625 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.957;BRSQ=0.635;LDAF=0.0654;AVGPOST=0.9521;RSQ=0.7438;ERATE=0.0015;THETA=0.0003;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 233730638 . AATACCT A 7196 PASS INDEL;BAVGPOST=0.959;BRSQ=0.707;LDAF=0.0663;AVGPOST=0.9646;RSQ=0.8198;ERATE=0.0006;THETA=0.0006;AC=138;AN=2184 GT:DS:GL:BD 0.06318682 0
1 233730666 . G GTA 248 PASS INDEL;BAVGPOST=0.998;BRSQ=0.617;LDAF=0.0070;AVGPOST=0.9957;RSQ=0.7570;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 233730669 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5466;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233730672 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.707;LDAF=0.0063;AVGPOST=0.9930;RSQ=0.5753;ERATE=0.0005;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233730737 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0101;AVGPOST=0.9994;RSQ=0.9727;ERATE=0.0002;THETA=0.0013;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 233730929 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0998;AVGPOST=0.9989;RSQ=0.9950;ERATE=0.0002;THETA=0.0002;AC=218;AN=2184 GT:DS:GL:BD 0.09981685 0
1 233731047 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1032;AVGPOST=0.9994;RSQ=0.9972;ERATE=0.0002;THETA=0.0004;AC=226;AN=2184 GT:DS:GL:BD 0.10347985 0
1 233731089 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0435;AVGPOST=0.9993;RSQ=0.9923;ERATE=0.0004;THETA=0.0007;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 233731104 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0031;AVGPOST=0.9966;RSQ=0.5532;ERATE=0.0006;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233731157 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.7335;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233731238 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0039;AVGPOST=0.9974;RSQ=0.7148;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233731272 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.966;LDAF=0.1431;AVGPOST=0.9932;RSQ=0.9782;ERATE=0.0008;THETA=0.0008;AC=310;AN=2184 GT:DS:GL:BD 0.14194140 0
1 233731303 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0033;AVGPOST=0.9968;RSQ=0.6449;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233731381 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.799;LDAF=0.9933;AVGPOST=0.9936;RSQ=0.6103;ERATE=0.0009;THETA=0.0003;AC=2175;AN=2184 GT:DS:GL:BD 0.99587911 1
1 233731391 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1085;AVGPOST=0.9925;RSQ=0.9713;ERATE=0.0007;THETA=0.0008;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 233731428 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0139;AVGPOST=0.9973;RSQ=0.9187;ERATE=0.0004;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 233731476 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.519;LDAF=0.0022;AVGPOST=0.9967;RSQ=0.3799;ERATE=0.0007;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233731525 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.795;LDAF=0.0575;AVGPOST=0.9548;RSQ=0.6875;ERATE=0.0065;THETA=0.0014;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 233731720 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0334;AVGPOST=0.9975;RSQ=0.9644;ERATE=0.0005;THETA=0.0003;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 233731955 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0022;AVGPOST=0.9973;RSQ=0.4983;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233731956 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.9971;AVGPOST=0.9997;RSQ=0.9553;ERATE=0.0003;THETA=0.0003;AC=2178;AN=2184 GT:DS:GL:BD 0.99725276 1
1 233731964 . AATTT A 7316 PASS INDEL;BAVGPOST=0.986;BRSQ=0.921;LDAF=0.0984;AVGPOST=0.9961;RSQ=0.9827;ERATE=0.0006;THETA=0.0002;AC=217;AN=2184 GT:DS:GL:BD 0.09935898 0
1 233731975 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3371;AVGPOST=0.9950;RSQ=0.9919;ERATE=0.0007;THETA=0.0008;AC=736;AN=2184 GT:DS:GL:BD 0.33699635 0
1 233731979 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.974;LDAF=0.2460;AVGPOST=0.9946;RSQ=0.9892;ERATE=0.0004;THETA=0.0003;AC=539;AN=2184 GT:DS:GL:BD 0.24679486 0
1 233732160 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0030;AVGPOST=0.9979;RSQ=0.7470;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233732201 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.9964;AVGPOST=0.9988;RSQ=0.8980;ERATE=0.0002;THETA=0.0007;AC=2176;AN=2184 GT:DS:GL:BD 0.99633700 1
1 233732234 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.872;LDAF=0.0148;AVGPOST=0.9989;RSQ=0.9688;ERATE=0.0004;THETA=0.0002;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 233732263 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7393;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233732274 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.787;LDAF=0.0030;AVGPOST=0.9983;RSQ=0.7648;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233732507 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3400;AVGPOST=0.9943;RSQ=0.9908;ERATE=0.0010;THETA=0.0002;AC=741;AN=2184 GT:DS:GL:BD 0.33928570 0
1 233732531 . T TA 35 PASS INDEL;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6528;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233732635 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9065;AVGPOST=0.9966;RSQ=0.9875;ERATE=0.0003;THETA=0.0002;AC=1979;AN=2184 GT:DS:GL:BD 0.90613556 1
1 233732697 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233732698 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.825;LDAF=0.0039;AVGPOST=0.9971;RSQ=0.7139;ERATE=0.0005;THETA=0.0001;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233732746 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.1026;AVGPOST=0.9989;RSQ=0.9953;ERATE=0.0004;THETA=0.0001;AC=224;AN=2184 GT:DS:GL:BD 0.10256410 0
1 233732761 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7778;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233732864 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.756;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6666;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233732935 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0022;AVGPOST=0.9995;RSQ=0.9135;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233733024 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1140;AVGPOST=0.9977;RSQ=0.9922;ERATE=0.0004;THETA=0.0002;AC=246;AN=2184 GT:DS:GL:BD 0.11263736 0
1 233733035 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7892;AVGPOST=0.9982;RSQ=0.9950;ERATE=0.0008;THETA=0.0001;AC=1723;AN=2184 GT:DS:GL:BD 0.78891939 1
1 233733049 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2323;AVGPOST=0.9986;RSQ=0.9969;ERATE=0.0003;THETA=0.0002;AC=507;AN=2184 GT:DS:GL:BD 0.23214285 0
1 233733134 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233733146 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0018;AVGPOST=0.9981;RSQ=0.6174;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233733153 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8864;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233733240 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5894;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233733241 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2455;AVGPOST=0.9996;RSQ=0.9991;ERATE=0.0004;THETA=0.0004;AC=537;AN=2184 GT:DS:GL:BD 0.24587911 0
1 233733243 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0019;AVGPOST=0.9994;RSQ=0.8662;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233733327 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.5017;AVGPOST=0.9989;RSQ=0.9981;ERATE=0.0005;THETA=0.0005;AC=1094;AN=2184 GT:DS:GL:BD 0.50091577 1
1 233733438 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233733489 . A AT 29 PASS INDEL;BAVGPOST=0.990;BRSQ=0.486;LDAF=0.0201;AVGPOST=0.9727;RSQ=0.4577;ERATE=0.0073;THETA=0.0001;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 233733628 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7890;AVGPOST=0.9987;RSQ=0.9964;ERATE=0.0006;THETA=0.0002;AC=1723;AN=2184 GT:DS:GL:BD 0.78891939 1
1 233733798 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0097;AVGPOST=0.9998;RSQ=0.9917;ERATE=0.0002;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 233733862 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0997;AVGPOST=0.9998;RSQ=0.9988;ERATE=0.0003;THETA=0.0002;AC=218;AN=2184 GT:DS:GL:BD 0.09981685 0
1 233733908 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0422;AVGPOST=0.9996;RSQ=0.9958;ERATE=0.0003;THETA=0.0003;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 233734037 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.689;LDAF=0.0065;AVGPOST=0.9897;RSQ=0.4006;ERATE=0.0023;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233734038 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.776;LDAF=0.0104;AVGPOST=0.9971;RSQ=0.8982;ERATE=0.0003;THETA=0.0001;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 233734129 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.988;LDAF=0.1067;AVGPOST=0.9919;RSQ=0.9686;ERATE=0.0021;THETA=0.0002;AC=227;AN=2184 GT:DS:GL:BD 0.10393773 0
1 233734276 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0440;AVGPOST=0.9989;RSQ=0.9908;ERATE=0.0002;THETA=0.0004;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 233734322 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0421;AVGPOST=0.9999;RSQ=0.9986;ERATE=0.0002;THETA=0.0001;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 233734338 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5004;AVGPOST=0.9995;RSQ=0.9990;ERATE=0.0003;THETA=0.0005;AC=1091;AN=2184 GT:DS:GL:BD 0.49954212 0
1 233734422 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9358;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233734435 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.7892;AVGPOST=0.9986;RSQ=0.9962;ERATE=0.0006;THETA=0.0006;AC=1723;AN=2184 GT:DS:GL:BD 0.78891939 1
1 233734587 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5911;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233734591 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7607;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233734697 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6819;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233734824 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0133;AVGPOST=0.9979;RSQ=0.9366;ERATE=0.0004;THETA=0.0001;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 233734843 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6313;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233734884 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0095;AVGPOST=0.9995;RSQ=0.9829;ERATE=0.0002;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 233734886 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233734941 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6171;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233734990 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5697;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233735029 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0094;AVGPOST=0.9996;RSQ=0.9871;ERATE=0.0002;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 233735038 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.1025;AVGPOST=0.9982;RSQ=0.9923;ERATE=0.0005;THETA=0.0002;AC=224;AN=2184 GT:DS:GL:BD 0.10256410 0
1 233735042 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0018;AVGPOST=0.9995;RSQ=0.8971;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233735043 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.0435;AVGPOST=0.9984;RSQ=0.9867;ERATE=0.0004;THETA=0.0002;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 233735049 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7878;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233735058 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.950;LDAF=0.1066;AVGPOST=0.9972;RSQ=0.9892;ERATE=0.0002;THETA=0.0002;AC=233;AN=2184 GT:DS:GL:BD 0.10668498 0
1 233735180 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6894;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233735200 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1043;AVGPOST=0.9980;RSQ=0.9931;ERATE=0.0003;THETA=0.0005;AC=227;AN=2184 GT:DS:GL:BD 0.10393773 0
1 233735208 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2896;AVGPOST=0.9972;RSQ=0.9955;ERATE=0.0003;THETA=0.0003;AC=633;AN=2184 GT:DS:GL:BD 0.28983516 0
1 233735255 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.7943;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233735341 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233735468 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.8693;AVGPOST=0.9985;RSQ=0.9945;ERATE=0.0003;THETA=0.0004;AC=1898;AN=2184 GT:DS:GL:BD 0.86904764 1
1 233735598 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.7547;ERATE=0.0003;THETA=0.0044;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233735639 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0824;AVGPOST=0.9995;RSQ=0.9975;ERATE=0.0002;THETA=0.0055;AC=180;AN=2184 GT:DS:GL:BD 0.08241758 0
1 233735670 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.809;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233735731 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7496;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233735894 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.3404;AVGPOST=0.9960;RSQ=0.9939;ERATE=0.0006;THETA=0.0059;AC=742;AN=2184 GT:DS:GL:BD 0.33974358 0
1 233735934 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9620;ERATE=0.0002;THETA=0.0040;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233735991 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9667;ERATE=0.0002;THETA=0.0098;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233736052 . C CT 809 PASS INDEL;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0052;AVGPOST=0.9988;RSQ=0.9291;ERATE=0.0003;THETA=0.0013;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 233736125 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8628;ERATE=0.0007;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233736167 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0967;AVGPOST=0.9991;RSQ=0.9961;ERATE=0.0003;THETA=0.0012;AC=211;AN=2184 GT:DS:GL:BD 0.09661172 0
1 233736168 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1429;AVGPOST=0.9962;RSQ=0.9869;ERATE=0.0027;THETA=0.0089;AC=310;AN=2184 GT:DS:GL:BD 0.14194140 0
1 233736211 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9957;AVGPOST=0.9997;RSQ=0.9702;ERATE=0.0002;THETA=0.0010;AC=2175;AN=2184 GT:DS:GL:BD 0.99587911 1
1 233736315 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.983;LDAF=0.1311;AVGPOST=0.9957;RSQ=0.9860;ERATE=0.0005;THETA=0.0008;AC=283;AN=2184 GT:DS:GL:BD 0.12957875 0
1 233736319 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3257;AVGPOST=0.9949;RSQ=0.9925;ERATE=0.0004;THETA=0.0035;AC=709;AN=2184 GT:DS:GL:BD 0.32463369 0
1 233736384 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2220;AVGPOST=0.9967;RSQ=0.9932;ERATE=0.0004;THETA=0.0055;AC=483;AN=2184 GT:DS:GL:BD 0.22115384 0
1 233736468 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233736586 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0039;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233736685 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.970;LDAF=0.2597;AVGPOST=0.9942;RSQ=0.9885;ERATE=0.0007;THETA=0.0003;AC=566;AN=2184 GT:DS:GL:BD 0.25915751 0
1 233736702 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.967;LDAF=0.2077;AVGPOST=0.9946;RSQ=0.9884;ERATE=0.0008;THETA=0.0004;AC=453;AN=2184 GT:DS:GL:BD 0.20741758 0
1 233736722 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.685;LDAF=0.0032;AVGPOST=0.9951;RSQ=0.4067;ERATE=0.0007;THETA=0.0046;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233736753 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2411;AVGPOST=0.9967;RSQ=0.9928;ERATE=0.0004;THETA=0.0001;AC=523;AN=2184 GT:DS:GL:BD 0.23946886 0
1 233736872 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.692;LDAF=0.0036;AVGPOST=0.9973;RSQ=0.6570;ERATE=0.0007;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233736887 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.637;LDAF=0.0027;AVGPOST=0.9956;RSQ=0.3517;ERATE=0.0004;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233736937 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.826;LDAF=0.0144;AVGPOST=0.9948;RSQ=0.8591;ERATE=0.0007;THETA=0.0002;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 233736974 . A AC 6 PASS INDEL;BAVGPOST=0.999;BRSQ=0.735;LDAF=0.0037;AVGPOST=0.9963;RSQ=0.5697;ERATE=0.0010;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233737019 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.8234;AVGPOST=0.9984;RSQ=0.9951;ERATE=0.0006;THETA=0.0002;AC=1799;AN=2184 GT:DS:GL:BD 0.82371795 1
1 233737055 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8256;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233737254 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7422;AVGPOST=0.9995;RSQ=0.9989;ERATE=0.0004;THETA=0.0003;AC=1620;AN=2184 GT:DS:GL:BD 0.74175823 1
1 233737263 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6964;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233737359 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7995;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233737522 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0954;AVGPOST=0.9995;RSQ=0.9979;ERATE=0.0002;THETA=0.0002;AC=209;AN=2184 GT:DS:GL:BD 0.09569597 0
1 233737594 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1303;AVGPOST=0.9988;RSQ=0.9955;ERATE=0.0004;THETA=0.0004;AC=285;AN=2184 GT:DS:GL:BD 0.13049451 0
1 233737622 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0084;AVGPOST=0.9994;RSQ=0.9642;ERATE=0.0003;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 233737678 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0154;AVGPOST=0.9896;RSQ=0.7436;ERATE=0.0007;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 233737766 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8231;AVGPOST=0.9972;RSQ=0.9916;ERATE=0.0005;THETA=0.0003;AC=1798;AN=2184 GT:DS:GL:BD 0.82326007 1
1 233737864 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.969;LDAF=0.3940;AVGPOST=0.9814;RSQ=0.9707;ERATE=0.0033;THETA=0.0003;AC=867;AN=2184 GT:DS:GL:BD 0.39697802 0
1 233737937 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.785;LDAF=0.0087;AVGPOST=0.9951;RSQ=0.7928;ERATE=0.0004;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 233737944 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0020;AVGPOST=0.9991;RSQ=0.8003;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233738206 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2043;AVGPOST=0.9993;RSQ=0.9982;ERATE=0.0004;THETA=0.0002;AC=445;AN=2184 GT:DS:GL:BD 0.20375457 0
1 233738210 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0191;AVGPOST=0.9997;RSQ=0.9939;ERATE=0.0002;THETA=0.0002;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 233738224 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.5196;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233738249 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3993;AVGPOST=0.9986;RSQ=0.9978;ERATE=0.0005;THETA=0.0003;AC=871;AN=2184 GT:DS:GL:BD 0.39880952 0
1 233738271 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7047;AVGPOST=0.9986;RSQ=0.9972;ERATE=0.0003;THETA=0.0003;AC=1541;AN=2184 GT:DS:GL:BD 0.70558608 1
1 233738314 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.965;LDAF=0.0219;AVGPOST=0.9989;RSQ=0.9849;ERATE=0.0002;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 233738342 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2103;AVGPOST=0.9980;RSQ=0.9955;ERATE=0.0005;THETA=0.0003;AC=460;AN=2184 GT:DS:GL:BD 0.21062271 0
1 233738348 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6334;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233738404 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1272;AVGPOST=0.9990;RSQ=0.9960;ERATE=0.0003;THETA=0.0002;AC=278;AN=2184 GT:DS:GL:BD 0.12728938 0
1 233738566 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.7051;AVGPOST=0.9991;RSQ=0.9981;ERATE=0.0003;THETA=0.0002;AC=1541;AN=2184 GT:DS:GL:BD 0.70558608 1
1 233738568 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0253;AVGPOST=0.9997;RSQ=0.9948;ERATE=0.0003;THETA=0.0044;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 233738625 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0962;AVGPOST=0.9979;RSQ=0.9912;ERATE=0.0004;THETA=0.0004;AC=210;AN=2184 GT:DS:GL:BD 0.09615385 0
1 233738888 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.872;LDAF=0.0098;AVGPOST=0.9975;RSQ=0.9069;ERATE=0.0002;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 233738892 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.960;LDAF=0.1945;AVGPOST=0.9891;RSQ=0.9746;ERATE=0.0009;THETA=0.0009;AC=428;AN=2184 GT:DS:GL:BD 0.19597070 0
1 233738893 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.960;LDAF=0.1962;AVGPOST=0.9885;RSQ=0.9735;ERATE=0.0007;THETA=0.0001;AC=431;AN=2184 GT:DS:GL:BD 0.19734432 0
1 233738908 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8825;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233739024 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.977;LDAF=0.0230;AVGPOST=0.9986;RSQ=0.9789;ERATE=0.0004;THETA=0.0001;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 233739114 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.864;LDAF=0.0072;AVGPOST=0.9981;RSQ=0.9129;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 233739155 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.934;LDAF=0.0135;AVGPOST=0.9973;RSQ=0.9229;ERATE=0.0002;THETA=0.0002;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 233739191 rs112742733 GC G 6772 PASS INDEL;BAVGPOST=0.995;BRSQ=0.971;LDAF=0.0734;AVGPOST=0.9982;RSQ=0.9888;ERATE=0.0005;THETA=0.0003;AC=161;AN=2184 GT:DS:GL:BD 0.07371795 0
1 233739218 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2059;AVGPOST=0.9992;RSQ=0.9979;ERATE=0.0003;THETA=0.0003;AC=451;AN=2184 GT:DS:GL:BD 0.20650183 0
1 233739219 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8296;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233739220 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0961;AVGPOST=0.9994;RSQ=0.9974;ERATE=0.0003;THETA=0.0002;AC=210;AN=2184 GT:DS:GL:BD 0.09615385 0
1 233739221 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233739412 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233739451 . A AT 123 PASS INDEL;BAVGPOST=0.999;BRSQ=0.766;LDAF=0.0039;AVGPOST=0.9978;RSQ=0.7720;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233739563 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2056;AVGPOST=0.9989;RSQ=0.9976;ERATE=0.0004;THETA=0.0001;AC=449;AN=2184 GT:DS:GL:BD 0.20558608 0
1 233739634 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2063;AVGPOST=0.9996;RSQ=0.9989;ERATE=0.0004;THETA=0.0003;AC=451;AN=2184 GT:DS:GL:BD 0.20650183 0
1 233739742 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8366;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233739769 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1343;AVGPOST=0.9959;RSQ=0.9861;ERATE=0.0004;THETA=0.0004;AC=293;AN=2184 GT:DS:GL:BD 0.13415751 0
1 233739918 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1726;AVGPOST=0.9992;RSQ=0.9973;ERATE=0.0003;THETA=0.0001;AC=378;AN=2184 GT:DS:GL:BD 0.17307693 0
1 233739967 . C CA 2180 PASS INDEL;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0131;AVGPOST=0.9993;RSQ=0.9809;ERATE=0.0003;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 233740223 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0039;AVGPOST=0.9976;RSQ=0.7795;ERATE=0.0002;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233740362 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.0959;AVGPOST=0.9980;RSQ=0.9919;ERATE=0.0003;THETA=0.0003;AC=211;AN=2184 GT:DS:GL:BD 0.09661172 0
1 233740424 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7679;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233740434 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7794;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233740436 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9725;ERATE=0.0002;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 233740577 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7443;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233740588 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.969;LDAF=0.1727;AVGPOST=0.9992;RSQ=0.9973;ERATE=0.0002;THETA=0.0002;AC=378;AN=2184 GT:DS:GL:BD 0.17307693 0
1 233740591 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.969;LDAF=0.1726;AVGPOST=0.9987;RSQ=0.9957;ERATE=0.0003;THETA=0.0001;AC=378;AN=2184 GT:DS:GL:BD 0.17307693 0
1 233740606 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.834;LDAF=0.0030;AVGPOST=0.9989;RSQ=0.8369;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233740644 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.2683;AVGPOST=0.9984;RSQ=0.9967;ERATE=0.0003;THETA=0.0004;AC=586;AN=2184 GT:DS:GL:BD 0.26831502 0
1 233740757 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.3345;AVGPOST=0.9936;RSQ=0.9904;ERATE=0.0009;THETA=0.0002;AC=729;AN=2184 GT:DS:GL:BD 0.33379120 0
1 233740793 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0192;AVGPOST=0.9992;RSQ=0.9848;ERATE=0.0003;THETA=0.0001;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 233740889 . C CT 19 PASS INDEL;BAVGPOST=0.992;BRSQ=0.569;LDAF=0.0150;AVGPOST=0.9797;RSQ=0.4675;ERATE=0.0065;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 233740947 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8057;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233740961 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8757;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233741036 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1727;AVGPOST=0.9995;RSQ=0.9982;ERATE=0.0004;THETA=0.0002;AC=378;AN=2184 GT:DS:GL:BD 0.17307693 0
1 233741079 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0950;AVGPOST=0.9992;RSQ=0.9962;ERATE=0.0004;THETA=0.0003;AC=208;AN=2184 GT:DS:GL:BD 0.09523810 0
1 233741085 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233741104 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0028;AVGPOST=0.9991;RSQ=0.8637;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233741183 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6541;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233741225 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5188;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233741267 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.624;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6772;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233741269 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2678;AVGPOST=0.9986;RSQ=0.9969;ERATE=0.0004;THETA=0.0004;AC=586;AN=2184 GT:DS:GL:BD 0.26831502 0
1 233741380 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5799;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233741596 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.855;LDAF=0.0042;AVGPOST=0.9971;RSQ=0.7388;ERATE=0.0005;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233741604 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0755;AVGPOST=0.9995;RSQ=0.9969;ERATE=0.0003;THETA=0.0003;AC=165;AN=2184 GT:DS:GL:BD 0.07554945 0
1 233741624 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1747;AVGPOST=0.9963;RSQ=0.9902;ERATE=0.0003;THETA=0.0002;AC=382;AN=2184 GT:DS:GL:BD 0.17490843 0
1 233741674 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0087;AVGPOST=0.9992;RSQ=0.9633;ERATE=0.0003;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 233741676 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.6660;AVGPOST=0.9979;RSQ=0.9960;ERATE=0.0006;THETA=0.0007;AC=1456;AN=2184 GT:DS:GL:BD 0.66666669 1
1 233741693 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1731;AVGPOST=0.9989;RSQ=0.9964;ERATE=0.0005;THETA=0.0004;AC=378;AN=2184 GT:DS:GL:BD 0.17307693 0
1 233741857 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.6998;AVGPOST=0.9957;RSQ=0.9916;ERATE=0.0008;THETA=0.0001;AC=1530;AN=2184 GT:DS:GL:BD 0.70054942 1
1 233741869 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.982;LDAF=0.0753;AVGPOST=0.9995;RSQ=0.9969;ERATE=0.0003;THETA=0.0003;AC=165;AN=2184 GT:DS:GL:BD 0.07554945 0
1 233741894 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.988;LDAF=0.2670;AVGPOST=0.9968;RSQ=0.9936;ERATE=0.0007;THETA=0.0001;AC=584;AN=2184 GT:DS:GL:BD 0.26739928 0
1 233741957 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.964;LDAF=0.6820;AVGPOST=0.9681;RSQ=0.9447;ERATE=0.0059;THETA=0.0005;AC=1507;AN=2184 GT:DS:GL:BD 0.69001830 1
1 233742013 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5019;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233742131 . G GGT 122 PASS INDEL;BAVGPOST=0.998;BRSQ=0.761;LDAF=0.0032;AVGPOST=0.9973;RSQ=0.6758;ERATE=0.0004;THETA=0.0036;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233742182 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.978;LDAF=0.6929;AVGPOST=0.9884;RSQ=0.9798;ERATE=0.0017;THETA=0.0003;AC=1516;AN=2184 GT:DS:GL:BD 0.69413918 1
1 233742309 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5142;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233742345 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.987;LDAF=0.6821;AVGPOST=0.9910;RSQ=0.9840;ERATE=0.0012;THETA=0.0005;AC=1496;AN=2184 GT:DS:GL:BD 0.68498170 1
1 233742415 rs74788451 CG C 25401 PASS INDEL;BAVGPOST=0.969;BRSQ=0.942;LDAF=0.6150;AVGPOST=0.9501;RSQ=0.9199;ERATE=0.0083;THETA=0.0003;AC=1355;AN=2184 GT:DS:GL:BD 0.62042123 1
1 233742581 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.961;BRSQ=0.872;LDAF=0.1667;AVGPOST=0.9871;RSQ=0.9648;ERATE=0.0007;THETA=0.0004;AC=369;AN=2184 GT:DS:GL:BD 0.16895604 0
1 233742689 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0052;AVGPOST=0.9996;RSQ=0.9758;ERATE=0.0002;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 233742702 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0949;AVGPOST=0.9986;RSQ=0.9952;ERATE=0.0003;THETA=0.0002;AC=207;AN=2184 GT:DS:GL:BD 0.09478022 0
1 233742727 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.767;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8829;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233742756 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0046;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233742777 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1742;AVGPOST=0.9991;RSQ=0.9971;ERATE=0.0004;THETA=0.0002;AC=381;AN=2184 GT:DS:GL:BD 0.17445055 0
1 233742811 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0079;AVGPOST=0.9974;RSQ=0.8683;ERATE=0.0006;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 233742864 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0191;AVGPOST=0.9992;RSQ=0.9853;ERATE=0.0003;THETA=0.0010;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 233742873 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233742895 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.8953;ERATE=0.0002;THETA=0.0001;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233742954 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0086;AVGPOST=0.9997;RSQ=0.9886;ERATE=0.0003;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 233742987 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6701;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233743022 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6144;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233743103 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2679;AVGPOST=0.9997;RSQ=0.9993;ERATE=0.0003;THETA=0.0003;AC=586;AN=2184 GT:DS:GL:BD 0.26831502 0
1 233743151 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.890;LDAF=0.0027;AVGPOST=0.9995;RSQ=0.9492;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233743198 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.6560;AVGPOST=0.9980;RSQ=0.9966;ERATE=0.0003;THETA=0.0003;AC=1433;AN=2184 GT:DS:GL:BD 0.65613556 1
1 233743261 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0088;AVGPOST=0.9997;RSQ=0.9844;ERATE=0.0002;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 233743282 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0055;AVGPOST=0.9999;RSQ=0.9920;ERATE=0.0002;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 233743304 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233743314 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.739;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6465;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233743328 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5431;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233743332 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1752;AVGPOST=0.9992;RSQ=0.9975;ERATE=0.0004;THETA=0.0004;AC=383;AN=2184 GT:DS:GL:BD 0.17536630 0
1 233743349 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.702;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5677;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233743371 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1743;AVGPOST=0.9992;RSQ=0.9975;ERATE=0.0003;THETA=0.0003;AC=381;AN=2184 GT:DS:GL:BD 0.17445055 0
1 233743373 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6213;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233743376 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5867;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233743429 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.1464;AVGPOST=0.9944;RSQ=0.9817;ERATE=0.0004;THETA=0.0002;AC=319;AN=2184 GT:DS:GL:BD 0.14606227 0
1 233743431 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.807;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6828;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233743493 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0200;AVGPOST=0.9991;RSQ=0.9849;ERATE=0.0002;THETA=0.0003;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 233743498 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1738;AVGPOST=0.9984;RSQ=0.9955;ERATE=0.0004;THETA=0.0003;AC=380;AN=2184 GT:DS:GL:BD 0.17399268 0
1 233743543 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1741;AVGPOST=0.9995;RSQ=0.9985;ERATE=0.0003;THETA=0.0033;AC=381;AN=2184 GT:DS:GL:BD 0.17445055 0
1 233743625 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233743639 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1320;AVGPOST=0.9973;RSQ=0.9921;ERATE=0.0004;THETA=0.0002;AC=287;AN=2184 GT:DS:GL:BD 0.13141026 0
1 233743734 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.949;LDAF=0.0179;AVGPOST=0.9956;RSQ=0.9187;ERATE=0.0002;THETA=0.0001;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 233743857 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0774;AVGPOST=0.9996;RSQ=0.9975;ERATE=0.0003;THETA=0.0018;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 233743993 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8980;ERATE=0.0002;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233744022 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0394;AVGPOST=0.9999;RSQ=0.9991;ERATE=0.0002;THETA=0.0002;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 233744054 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0779;AVGPOST=0.9983;RSQ=0.9900;ERATE=0.0007;THETA=0.0002;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 233744125 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1701;AVGPOST=0.9995;RSQ=0.9985;ERATE=0.0004;THETA=0.0003;AC=372;AN=2184 GT:DS:GL:BD 0.17032968 0
1 233744141 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.720;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233744205 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1701;AVGPOST=0.9995;RSQ=0.9987;ERATE=0.0004;THETA=0.0006;AC=372;AN=2184 GT:DS:GL:BD 0.17032968 0
1 233744218 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0944;AVGPOST=0.9989;RSQ=0.9952;ERATE=0.0004;THETA=0.0004;AC=207;AN=2184 GT:DS:GL:BD 0.09478022 0
1 233744273 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0063;AVGPOST=0.9992;RSQ=0.9536;ERATE=0.0003;THETA=0.0001;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 233744274 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.885;LDAF=0.0136;AVGPOST=0.9956;RSQ=0.8721;ERATE=0.0004;THETA=0.0002;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 233744512 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233744514 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0023;AVGPOST=0.9998;RSQ=0.9626;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233744541 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0943;AVGPOST=0.9976;RSQ=0.9909;ERATE=0.0004;THETA=0.0003;AC=206;AN=2184 GT:DS:GL:BD 0.09432235 0
1 233744579 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1168;AVGPOST=0.9992;RSQ=0.9969;ERATE=0.0003;THETA=0.0006;AC=255;AN=2184 GT:DS:GL:BD 0.11675824 0
1 233744681 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9531;ERATE=0.0002;THETA=0.0010;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 233744694 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233744697 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.827;LDAF=0.0028;AVGPOST=0.9992;RSQ=0.9070;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233744782 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1166;AVGPOST=0.9999;RSQ=0.9995;ERATE=0.0003;THETA=0.0003;AC=255;AN=2184 GT:DS:GL:BD 0.11675824 0
1 233744807 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.828;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8699;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233744868 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0394;AVGPOST=0.9997;RSQ=0.9971;ERATE=0.0003;THETA=0.0001;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 233744925 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8830;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233745034 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0925;AVGPOST=0.9996;RSQ=0.9983;ERATE=0.0002;THETA=0.0002;AC=202;AN=2184 GT:DS:GL:BD 0.09249084 0
1 233745181 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1256;AVGPOST=0.9987;RSQ=0.9948;ERATE=0.0003;THETA=0.0003;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 233745241 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233745242 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0039;AVGPOST=0.9987;RSQ=0.8788;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233745281 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3059;AVGPOST=0.9984;RSQ=0.9968;ERATE=0.0005;THETA=0.0002;AC=670;AN=2184 GT:DS:GL:BD 0.30677655 0
1 233745317 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6710;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233745337 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.751;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6143;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233745347 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233745369 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6872;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233745417 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0923;AVGPOST=0.9996;RSQ=0.9983;ERATE=0.0003;THETA=0.0003;AC=202;AN=2184 GT:DS:GL:BD 0.09249084 0
1 233745449 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.1166;AVGPOST=0.9997;RSQ=0.9989;ERATE=0.0003;THETA=0.0002;AC=255;AN=2184 GT:DS:GL:BD 0.11675824 0
1 233745507 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.780;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233745537 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233745541 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233745598 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7995;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233745607 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233745686 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8771;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233745746 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0225;AVGPOST=0.9997;RSQ=0.9945;ERATE=0.0002;THETA=0.0004;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 233745840 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233745897 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7620;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233745941 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9823;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233745999 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6118;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233746243 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5691;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233746259 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2040;AVGPOST=0.9963;RSQ=0.9921;ERATE=0.0003;THETA=0.0004;AC=444;AN=2184 GT:DS:GL:BD 0.20329671 0
1 233746544 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0044;AVGPOST=0.9975;RSQ=0.7998;ERATE=0.0003;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233746566 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233746585 . AG A 51 PASS INDEL;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8176;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233746587 . AT A 51 PASS INDEL;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8096;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233746713 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0775;AVGPOST=0.9993;RSQ=0.9957;ERATE=0.0003;THETA=0.0003;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 233746761 . T TG 52 PASS INDEL;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233746814 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8699;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233746820 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6756;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233746854 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5354;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233746869 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0931;AVGPOST=0.9995;RSQ=0.9981;ERATE=0.0002;THETA=0.0007;AC=204;AN=2184 GT:DS:GL:BD 0.09340660 0
1 233747090 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0997;AVGPOST=0.9991;RSQ=0.9957;ERATE=0.0004;THETA=0.0005;AC=218;AN=2184 GT:DS:GL:BD 0.09981685 0
1 233747205 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0380;AVGPOST=0.9979;RSQ=0.9807;ERATE=0.0005;THETA=0.0010;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 233747330 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5799;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233747336 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.864;LDAF=0.0022;AVGPOST=0.9981;RSQ=0.6515;ERATE=0.0006;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233747344 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233747536 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0117;AVGPOST=0.9994;RSQ=0.9787;ERATE=0.0002;THETA=0.0009;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 233747562 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0386;AVGPOST=0.9996;RSQ=0.9963;ERATE=0.0002;THETA=0.0006;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 233747667 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233747671 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233747834 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0386;AVGPOST=0.9996;RSQ=0.9958;ERATE=0.0003;THETA=0.0011;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 233747920 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.8986;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233747923 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233748028 . GGA G 23 PASS INDEL;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6419;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233748195 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7081;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233748196 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0195;AVGPOST=0.9992;RSQ=0.9868;ERATE=0.0002;THETA=0.0005;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 233748251 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0172;AVGPOST=0.9994;RSQ=0.9848;ERATE=0.0002;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 233748316 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0083;AVGPOST=0.9994;RSQ=0.9662;ERATE=0.0002;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 233748488 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.678;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5598;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233748613 . ATGTG A 363 PASS INDEL;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.9078;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233748698 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233748709 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8305;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233748783 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0784;AVGPOST=0.9961;RSQ=0.9799;ERATE=0.0004;THETA=0.0003;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 233749021 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0994;AVGPOST=0.9982;RSQ=0.9915;ERATE=0.0002;THETA=0.0003;AC=218;AN=2184 GT:DS:GL:BD 0.09981685 0
1 233749034 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.752;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7546;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233749382 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0320;AVGPOST=0.9989;RSQ=0.9840;ERATE=0.0003;THETA=0.0008;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 233749855 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.872;BRSQ=0.723;LDAF=0.6623;AVGPOST=0.7608;RSQ=0.5622;ERATE=0.0199;THETA=0.0004;AC=1497;AN=2184 GT:DS:GL:BD 0.68543959 1
1 233749990 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8725;ERATE=0.0004;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233750008 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7841;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233750039 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233750067 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.661;LDAF=0.0046;AVGPOST=0.9948;RSQ=0.5634;ERATE=0.0043;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233750125 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233750460 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.520;LDAF=0.0012;AVGPOST=0.9983;RSQ=0.3673;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233750469 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.943;LDAF=0.0816;AVGPOST=0.9910;RSQ=0.9493;ERATE=0.0011;THETA=0.0003;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 233750484 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.0944;AVGPOST=0.9950;RSQ=0.9798;ERATE=0.0007;THETA=0.0002;AC=206;AN=2184 GT:DS:GL:BD 0.09432235 0
1 233750504 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.970;LDAF=0.0791;AVGPOST=0.9926;RSQ=0.9612;ERATE=0.0007;THETA=0.0059;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 233750528 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.961;LDAF=0.3147;AVGPOST=0.9779;RSQ=0.9632;ERATE=0.0007;THETA=0.0167;AC=685;AN=2184 GT:DS:GL:BD 0.31364468 0
1 233750535 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0387;AVGPOST=0.9976;RSQ=0.9728;ERATE=0.0005;THETA=0.0091;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 233750675 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.0924;AVGPOST=0.9902;RSQ=0.9621;ERATE=0.0004;THETA=0.0272;AC=200;AN=2184 GT:DS:GL:BD 0.09157509 0
1 233750724 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.935;BRSQ=0.903;LDAF=0.5366;AVGPOST=0.9358;RSQ=0.9190;ERATE=0.0009;THETA=0.0006;AC=1179;AN=2184 GT:DS:GL:BD 0.53983516 1
1 233750725 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.934;BRSQ=0.901;LDAF=0.5341;AVGPOST=0.9365;RSQ=0.9205;ERATE=0.0005;THETA=0.0028;AC=1175;AN=2184 GT:DS:GL:BD 0.53800368 1
1 233750725 . A AC 12127 PASS INDEL;BAVGPOST=0.922;BRSQ=0.882;LDAF=0.5355;AVGPOST=0.8917;RSQ=0.8560;ERATE=0.0064;THETA=0.0060;AC=1168;AN=2184 GT:DS:GL:BD 0.53479856 1
1 233750809 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0336;AVGPOST=0.9990;RSQ=0.9880;ERATE=0.0002;THETA=0.0029;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 233750825 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8830;ERATE=0.0003;THETA=0.0025;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233750929 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.758;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8664;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233750948 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0335;AVGPOST=0.9994;RSQ=0.9928;ERATE=0.0002;THETA=0.0061;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 233750974 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8116;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233751023 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.886;LDAF=0.0204;AVGPOST=0.9963;RSQ=0.9245;ERATE=0.0004;THETA=0.0119;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 233751223 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7290;ERATE=0.0002;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233751247 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.8241;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233751289 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6377;ERATE=0.0003;THETA=0.0052;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233751292 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7899;ERATE=0.0003;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233751315 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0049;AVGPOST=0.9995;RSQ=0.9579;ERATE=0.0003;THETA=0.0044;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 233751334 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0061;AVGPOST=0.9980;RSQ=0.8784;ERATE=0.0005;THETA=0.0081;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 233751479 . A AC 25 PASS INDEL;BAVGPOST=0.999;BRSQ=0.576;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.3901;ERATE=0.0004;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233751566 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8396;ERATE=0.0002;THETA=0.0030;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233751576 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.982;LDAF=0.0340;AVGPOST=0.9991;RSQ=0.9895;ERATE=0.0002;THETA=0.0081;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 233751597 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.983;LDAF=0.0318;AVGPOST=0.9992;RSQ=0.9908;ERATE=0.0002;THETA=0.0076;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 233751627 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.810;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6846;ERATE=0.0003;THETA=0.0023;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233751734 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6380;ERATE=0.0003;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233751755 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.849;LDAF=0.0055;AVGPOST=0.9981;RSQ=0.8561;ERATE=0.0004;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 233751840 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0036;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233751897 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9602;ERATE=0.0003;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233752109 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5149;ERATE=0.0004;THETA=0.0080;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233752124 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9294;ERATE=0.0004;THETA=0.0067;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233752217 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.805;LDAF=0.0059;AVGPOST=0.9975;RSQ=0.8467;ERATE=0.0004;THETA=0.0029;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 233752388 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0169;AVGPOST=0.9981;RSQ=0.9599;ERATE=0.0003;THETA=0.0061;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 233752421 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6151;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233752536 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.841;LDAF=0.0077;AVGPOST=0.9966;RSQ=0.8417;ERATE=0.0003;THETA=0.0113;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 233752537 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.813;LDAF=0.0058;AVGPOST=0.9978;RSQ=0.8570;ERATE=0.0004;THETA=0.0029;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 233752636 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.865;LDAF=0.0318;AVGPOST=0.9921;RSQ=0.8977;ERATE=0.0010;THETA=0.0035;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 233752671 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233752697 . T TC 4183 PASS INDEL;BAVGPOST=0.998;BRSQ=0.980;LDAF=0.0235;AVGPOST=0.9982;RSQ=0.9720;ERATE=0.0003;THETA=0.0027;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 233752727 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.986;LDAF=0.0242;AVGPOST=0.9971;RSQ=0.9533;ERATE=0.0005;THETA=0.0010;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 233752746 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0237;AVGPOST=0.9982;RSQ=0.9732;ERATE=0.0003;THETA=0.0017;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 233752860 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233753185 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.805;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8825;ERATE=0.0002;THETA=0.0036;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233753228 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.773;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7297;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233753255 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0051;AVGPOST=0.9982;RSQ=0.8480;ERATE=0.0010;THETA=0.0022;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 233753259 . GT G 50 PASS INDEL;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6151;ERATE=0.0003;THETA=0.0035;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233753336 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0076;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233753342 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6526;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233753351 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7608;ERATE=0.0003;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233753381 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.824;LDAF=0.0039;AVGPOST=0.9983;RSQ=0.8170;ERATE=0.0004;THETA=0.0019;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233753537 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6897;ERATE=0.0004;THETA=0.0060;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233753544 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0031;AVGPOST=0.9991;RSQ=0.8764;ERATE=0.0002;THETA=0.0012;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233753565 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8631;ERATE=0.0004;THETA=0.0015;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233753590 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.824;LDAF=0.0021;AVGPOST=0.9989;RSQ=0.7932;ERATE=0.0006;THETA=0.0032;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233753683 . G GA 19 PASS INDEL;BAVGPOST=0.993;BRSQ=0.389;LDAF=0.0065;AVGPOST=0.9887;RSQ=0.3286;ERATE=0.0023;THETA=0.0080;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233753684 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.770;LDAF=0.0031;AVGPOST=0.9984;RSQ=0.8281;ERATE=0.0005;THETA=0.0038;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233753740 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0023;AVGPOST=0.9979;RSQ=0.6554;ERATE=0.0003;THETA=0.0094;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233753798 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8839;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233753813 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0065;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233753933 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.894;LDAF=0.0054;AVGPOST=0.9992;RSQ=0.9286;ERATE=0.0003;THETA=0.0051;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 233753951 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.7003;ERATE=0.0003;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233753991 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.969;LDAF=0.7679;AVGPOST=0.9846;RSQ=0.9685;ERATE=0.0006;THETA=0.0021;AC=1680;AN=2184 GT:DS:GL:BD 0.76923078 1
1 233753997 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6010;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233754022 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.611;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6193;ERATE=0.0004;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233754121 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0280;AVGPOST=0.9973;RSQ=0.9630;ERATE=0.0004;THETA=0.0010;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 233754161 . TA T 151 PASS INDEL;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0034;AVGPOST=0.9987;RSQ=0.8388;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233754237 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.974;LDAF=0.0396;AVGPOST=0.9966;RSQ=0.9693;ERATE=0.0005;THETA=0.0013;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 233754285 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.854;LDAF=0.0093;AVGPOST=0.9957;RSQ=0.8449;ERATE=0.0003;THETA=0.0013;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 233754360 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.599;LDAF=0.0021;AVGPOST=0.9977;RSQ=0.5370;ERATE=0.0005;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233754368 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.970;LDAF=0.0249;AVGPOST=0.9976;RSQ=0.9632;ERATE=0.0004;THETA=0.0010;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 233754481 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0275;AVGPOST=0.9981;RSQ=0.9725;ERATE=0.0004;THETA=0.0041;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 233754493 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7580;ERATE=0.0008;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233754512 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.964;LDAF=0.7598;AVGPOST=0.9773;RSQ=0.9560;ERATE=0.0012;THETA=0.0010;AC=1668;AN=2184 GT:DS:GL:BD 0.76373625 1
1 233754556 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.967;BRSQ=0.814;LDAF=0.0792;AVGPOST=0.9645;RSQ=0.8086;ERATE=0.0004;THETA=0.0007;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 233754579 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.907;BRSQ=0.830;LDAF=0.3196;AVGPOST=0.8785;RSQ=0.7999;ERATE=0.0055;THETA=0.0005;AC=676;AN=2184 GT:DS:GL:BD 0.30952382 0
1 233754621 . T TC 807 PASS INDEL;BAVGPOST=0.997;BRSQ=0.808;LDAF=0.0048;AVGPOST=0.9984;RSQ=0.8687;ERATE=0.0006;THETA=0.0019;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 233754810 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0002;AVGPOST=0.9995;RSQ=0.1096;ERATE=0.0003;THETA=0.0017;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 233754930 . A AT 303 PASS INDEL;BAVGPOST=0.961;BRSQ=0.516;LDAF=0.0627;AVGPOST=0.9261;RSQ=0.4768;ERATE=0.0184;THETA=0.0014;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 233754940 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.960;LDAF=0.7610;AVGPOST=0.9798;RSQ=0.9599;ERATE=0.0004;THETA=0.0142;AC=1667;AN=2184 GT:DS:GL:BD 0.76327837 1
1 233755005 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0029;AVGPOST=0.9994;RSQ=0.8978;ERATE=0.0003;THETA=0.0074;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233755270 . G GT 106 PASS INDEL;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0031;AVGPOST=0.9959;RSQ=0.5517;ERATE=0.0003;THETA=0.0102;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233755352 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.715;LDAF=0.0083;AVGPOST=0.9966;RSQ=0.8349;ERATE=0.0003;THETA=0.0127;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 233755420 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.614;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5091;ERATE=0.0004;THETA=0.0186;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233755442 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.863;BRSQ=0.758;LDAF=0.3994;AVGPOST=0.8600;RSQ=0.7848;ERATE=0.0181;THETA=0.0183;AC=862;AN=2184 GT:DS:GL:BD 0.39468864 0
1 233755473 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.947;BRSQ=0.736;LDAF=0.0900;AVGPOST=0.9532;RSQ=0.7894;ERATE=0.0014;THETA=0.0131;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 233755548 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.456;LDAF=0.0068;AVGPOST=0.9909;RSQ=0.4452;ERATE=0.0012;THETA=0.0126;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233755553 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.715;LDAF=0.0123;AVGPOST=0.9917;RSQ=0.7448;ERATE=0.0004;THETA=0.0143;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 233755561 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.583;LDAF=0.0047;AVGPOST=0.9922;RSQ=0.2839;ERATE=0.0007;THETA=0.0185;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233755674 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.957;BRSQ=0.246;LDAF=0.0924;AVGPOST=0.8464;RSQ=0.2716;ERATE=0.0075;THETA=0.0199;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 233755694 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.803;BRSQ=0.572;LDAF=0.3023;AVGPOST=0.7282;RSQ=0.5076;ERATE=0.0198;THETA=0.0059;AC=515;AN=2184 GT:DS:GL:BD 0.23580585 0
1 233755701 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.417;LDAF=0.0381;AVGPOST=0.9549;RSQ=0.4943;ERATE=0.0023;THETA=0.0053;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 233755814 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.856;LDAF=0.0345;AVGPOST=0.9862;RSQ=0.8416;ERATE=0.0015;THETA=0.0110;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 233755844 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0002;THETA=0.0106;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233755963 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.647;LDAF=0.0045;AVGPOST=0.9949;RSQ=0.5302;ERATE=0.0011;THETA=0.0151;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233756046 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.715;LDAF=0.0018;AVGPOST=0.9981;RSQ=0.5484;ERATE=0.0003;THETA=0.0214;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233756062 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.947;LDAF=0.0167;AVGPOST=0.9967;RSQ=0.9166;ERATE=0.0004;THETA=0.0092;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 233756065 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.945;BRSQ=0.891;LDAF=0.7146;AVGPOST=0.9514;RSQ=0.9145;ERATE=0.0051;THETA=0.0089;AC=1568;AN=2184 GT:DS:GL:BD 0.71794873 1
1 233756099 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4631;ERATE=0.0003;THETA=0.0104;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233756105 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0059;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233756138 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.6872;ERATE=0.0009;THETA=0.0125;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233756160 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7323;ERATE=0.0003;THETA=0.0051;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233756283 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.8063;ERATE=0.0004;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233756435 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.896;LDAF=0.0115;AVGPOST=0.9963;RSQ=0.8757;ERATE=0.0004;THETA=0.0056;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 233756513 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.711;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4430;ERATE=0.0004;THETA=0.0044;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233756524 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0235;AVGPOST=0.9984;RSQ=0.9710;ERATE=0.0003;THETA=0.0007;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 233756545 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233756565 rs59978878 GATAA G 14694 PASS INDEL;BAVGPOST=0.979;BRSQ=0.922;LDAF=0.1322;AVGPOST=0.9775;RSQ=0.9305;ERATE=0.0005;THETA=0.0031;AC=289;AN=2184 GT:DS:GL:BD 0.13232601 0
1 233756644 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.835;LDAF=0.0063;AVGPOST=0.9973;RSQ=0.8305;ERATE=0.0004;THETA=0.0052;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 233756743 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0112;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233756772 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.953;LDAF=0.0191;AVGPOST=0.9974;RSQ=0.9419;ERATE=0.0003;THETA=0.0013;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 233756773 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0224;AVGPOST=0.9999;RSQ=0.9981;ERATE=0.0002;THETA=0.0029;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 233756824 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0225;AVGPOST=0.9998;RSQ=0.9961;ERATE=0.0003;THETA=0.0008;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 233756846 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.970;LDAF=0.5879;AVGPOST=0.9859;RSQ=0.9787;ERATE=0.0004;THETA=0.0009;AC=1284;AN=2184 GT:DS:GL:BD 0.58791208 1
1 233756865 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233757028 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9149;ERATE=0.0002;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233757120 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9375;ERATE=0.0002;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233757231 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.5908;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233757257 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.1571;AVGPOST=0.9956;RSQ=0.9880;ERATE=0.0004;THETA=0.0006;AC=341;AN=2184 GT:DS:GL:BD 0.15613553 0
1 233757273 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9331;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233757290 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8699;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233757316 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.754;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.7958;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233757321 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7520;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233757333 . TAAG T 78 PASS INDEL;BAVGPOST=1.000;BRSQ=0.763;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5492;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233757443 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233757476 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.715;LDAF=0.0117;AVGPOST=0.9910;RSQ=0.7085;ERATE=0.0033;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 233757477 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.988;LDAF=0.1251;AVGPOST=0.9938;RSQ=0.9789;ERATE=0.0010;THETA=0.0007;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 233757491 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0227;AVGPOST=0.9994;RSQ=0.9878;ERATE=0.0002;THETA=0.0010;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 233757534 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0029;AVGPOST=0.9998;RSQ=0.9618;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233757545 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.911;LDAF=0.0409;AVGPOST=0.9906;RSQ=0.9076;ERATE=0.0004;THETA=0.0007;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 233757571 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.838;LDAF=0.0065;AVGPOST=0.9984;RSQ=0.9054;ERATE=0.0004;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 233757628 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233757695 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233757721 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1291;AVGPOST=0.9992;RSQ=0.9971;ERATE=0.0003;THETA=0.0021;AC=281;AN=2184 GT:DS:GL:BD 0.12866300 0
1 233757845 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0057;AVGPOST=0.9987;RSQ=0.9188;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 233757910 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1559;AVGPOST=0.9989;RSQ=0.9966;ERATE=0.0004;THETA=0.0014;AC=340;AN=2184 GT:DS:GL:BD 0.15567766 0
1 233757978 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233758073 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1292;AVGPOST=0.9989;RSQ=0.9967;ERATE=0.0004;THETA=0.0006;AC=281;AN=2184 GT:DS:GL:BD 0.12866300 0
1 233758090 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233758218 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.953;LDAF=0.7553;AVGPOST=0.9807;RSQ=0.9610;ERATE=0.0005;THETA=0.0001;AC=1652;AN=2184 GT:DS:GL:BD 0.75641024 1
1 233758297 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0045;AVGPOST=0.9988;RSQ=0.8914;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233758320 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5547;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233758327 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.802;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4861;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233758373 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7654;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233758540 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8316;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233758575 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.728;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233758621 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7163;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233758670 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233758686 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.950;LDAF=0.1759;AVGPOST=0.9828;RSQ=0.9578;ERATE=0.0005;THETA=0.0006;AC=382;AN=2184 GT:DS:GL:BD 0.17490843 0
1 233758723 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0029;AVGPOST=0.9982;RSQ=0.7636;ERATE=0.0005;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233758774 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0020;AVGPOST=0.9991;RSQ=0.8201;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233758784 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7802;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233758818 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1296;AVGPOST=0.9987;RSQ=0.9954;ERATE=0.0005;THETA=0.0002;AC=282;AN=2184 GT:DS:GL:BD 0.12912089 0
1 233758900 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.894;LDAF=0.0053;AVGPOST=0.9989;RSQ=0.9048;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 233758945 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7679;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233759041 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233759146 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233759158 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1338;AVGPOST=0.9977;RSQ=0.9920;ERATE=0.0004;THETA=0.0006;AC=293;AN=2184 GT:DS:GL:BD 0.13415751 0
1 233759312 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7536;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233759351 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0226;AVGPOST=0.9996;RSQ=0.9924;ERATE=0.0003;THETA=0.0006;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 233759419 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.1261;AVGPOST=0.9988;RSQ=0.9956;ERATE=0.0003;THETA=0.0005;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 233759543 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.969;LDAF=0.2815;AVGPOST=0.9888;RSQ=0.9798;ERATE=0.0018;THETA=0.0002;AC=617;AN=2184 GT:DS:GL:BD 0.28250915 0
1 233759550 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9181;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233759559 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.973;LDAF=0.1310;AVGPOST=0.9962;RSQ=0.9877;ERATE=0.0004;THETA=0.0013;AC=289;AN=2184 GT:DS:GL:BD 0.13232601 0
1 233759587 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6252;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233759616 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.854;LDAF=0.0021;AVGPOST=0.9987;RSQ=0.7382;ERATE=0.0007;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233759631 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9244;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233759680 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0026;AVGPOST=0.9985;RSQ=0.7628;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233759837 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.870;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.8083;ERATE=0.0003;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233759864 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.975;LDAF=0.1223;AVGPOST=0.9934;RSQ=0.9785;ERATE=0.0004;THETA=0.0005;AC=267;AN=2184 GT:DS:GL:BD 0.12225275 0
1 233759918 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.979;LDAF=0.2993;AVGPOST=0.9909;RSQ=0.9850;ERATE=0.0009;THETA=0.0009;AC=655;AN=2184 GT:DS:GL:BD 0.29990843 0
1 233759939 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.987;LDAF=0.1278;AVGPOST=0.9974;RSQ=0.9919;ERATE=0.0003;THETA=0.0003;AC=279;AN=2184 GT:DS:GL:BD 0.12774725 0
1 233759994 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6288;ERATE=0.0003;THETA=0.0036;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233760106 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.984;LDAF=0.5440;AVGPOST=0.9881;RSQ=0.9829;ERATE=0.0012;THETA=0.0031;AC=1190;AN=2184 GT:DS:GL:BD 0.54487181 1
1 233760124 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7834;ERATE=0.0003;THETA=0.0048;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233760126 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9531;ERATE=0.0002;THETA=0.0020;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233760243 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8705;ERATE=0.0004;THETA=0.0064;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233760366 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0019;AVGPOST=0.9996;RSQ=0.9015;ERATE=0.0003;THETA=0.0020;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233760410 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.733;LDAF=0.0017;AVGPOST=0.9986;RSQ=0.6732;ERATE=0.0004;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233760556 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.640;LDAF=0.0039;AVGPOST=0.9976;RSQ=0.7846;ERATE=0.0004;THETA=0.0034;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233760661 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6933;ERATE=0.0003;THETA=0.0060;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233760690 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0002;THETA=0.0046;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233760756 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233760815 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0004;THETA=0.0034;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233760829 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6616;ERATE=0.0002;THETA=0.0062;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233760865 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0264;AVGPOST=0.9972;RSQ=0.9561;ERATE=0.0004;THETA=0.0116;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 233760904 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0049;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233760945 . TC T 403 PASS INDEL;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9144;ERATE=0.0002;THETA=0.0044;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233760960 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.688;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0053;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233760990 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5836;ERATE=0.0003;THETA=0.0109;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233760995 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.680;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8605;ERATE=0.0003;THETA=0.0070;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233761011 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.795;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6291;ERATE=0.0005;THETA=0.0036;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233761035 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8450;ERATE=0.0002;THETA=0.0038;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233761073 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.678;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0002;THETA=0.0113;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233761112 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0214;AVGPOST=0.9986;RSQ=0.9756;ERATE=0.0002;THETA=0.0089;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 233761269 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.955;LDAF=0.0805;AVGPOST=0.9932;RSQ=0.9658;ERATE=0.0005;THETA=0.0094;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 233761271 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.945;LDAF=0.0715;AVGPOST=0.9907;RSQ=0.9458;ERATE=0.0006;THETA=0.0092;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 233761305 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.955;LDAF=0.0588;AVGPOST=0.9957;RSQ=0.9713;ERATE=0.0002;THETA=0.0334;AC=126;AN=2184 GT:DS:GL:BD 0.05769231 0
1 233761343 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8230;ERATE=0.0004;THETA=0.0093;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233761367 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0095;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233761398 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9302;ERATE=0.0003;THETA=0.0040;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233761399 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5578;ERATE=0.0003;THETA=0.0133;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233761515 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.923;LDAF=0.0219;AVGPOST=0.9958;RSQ=0.9239;ERATE=0.0008;THETA=0.0240;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 233761516 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.681;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7557;ERATE=0.0003;THETA=0.0063;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233761608 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8814;ERATE=0.0003;THETA=0.0106;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233761669 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.769;LDAF=0.0032;AVGPOST=0.9966;RSQ=0.6000;ERATE=0.0018;THETA=0.0171;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233761813 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0422;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233761865 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.442;LDAF=0.0025;AVGPOST=0.9966;RSQ=0.4731;ERATE=0.0009;THETA=0.0292;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233761867 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.808;LDAF=0.0163;AVGPOST=0.9920;RSQ=0.8062;ERATE=0.0003;THETA=0.0066;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 233761884 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.889;LDAF=0.0087;AVGPOST=0.9969;RSQ=0.8423;ERATE=0.0019;THETA=0.0175;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 233761886 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.849;LDAF=0.0126;AVGPOST=0.9957;RSQ=0.8608;ERATE=0.0046;THETA=0.0167;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 233761906 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.880;LDAF=0.9642;AVGPOST=0.9868;RSQ=0.8599;ERATE=0.0095;THETA=0.0151;AC=2116;AN=2184 GT:DS:GL:BD 0.96886444 1
1 233761987 . AAAG A 75 PASS INDEL;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7197;ERATE=0.0003;THETA=0.0187;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233762158 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.768;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8141;ERATE=0.0004;THETA=0.0230;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233762166 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.849;LDAF=0.0046;AVGPOST=0.9991;RSQ=0.9234;ERATE=0.0003;THETA=0.0292;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 233762182 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6689;ERATE=0.0003;THETA=0.0213;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233762183 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0179;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233762210 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.739;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6408;ERATE=0.0003;THETA=0.0151;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233762218 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.888;LDAF=0.0058;AVGPOST=0.9985;RSQ=0.9046;ERATE=0.0003;THETA=0.0290;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 233762277 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0182;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233762278 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0020;AVGPOST=0.9992;RSQ=0.8753;ERATE=0.0002;THETA=0.0121;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233762446 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0031;AVGPOST=0.9991;RSQ=0.8594;ERATE=0.0004;THETA=0.0222;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233762580 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8078;ERATE=0.0003;THETA=0.0189;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233762589 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4222;ERATE=0.0005;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233762619 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.951;BRSQ=0.919;LDAF=0.6119;AVGPOST=0.9289;RSQ=0.8966;ERATE=0.0014;THETA=0.0074;AC=1336;AN=2184 GT:DS:GL:BD 0.61172163 1
1 233762635 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.937;LDAF=0.0446;AVGPOST=0.9832;RSQ=0.8470;ERATE=0.0005;THETA=0.0139;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 233762747 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.770;LDAF=0.0027;AVGPOST=0.9982;RSQ=0.7246;ERATE=0.0005;THETA=0.0034;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233762757 . A AT 4770 PASS INDEL;BAVGPOST=0.975;BRSQ=0.880;LDAF=0.1071;AVGPOST=0.9487;RSQ=0.7932;ERATE=0.0067;THETA=0.0071;AC=212;AN=2184 GT:DS:GL:BD 0.09706960 0
1 233762901 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.959;LDAF=0.6208;AVGPOST=0.9724;RSQ=0.9553;ERATE=0.0009;THETA=0.0093;AC=1356;AN=2184 GT:DS:GL:BD 0.62087911 1
1 233762904 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0164;AVGPOST=0.9968;RSQ=0.9311;ERATE=0.0004;THETA=0.0019;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 233762931 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0348;AVGPOST=0.9975;RSQ=0.9734;ERATE=0.0004;THETA=0.0007;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 233762982 . CTTT C 430 PASS INDEL;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7320;ERATE=0.0004;THETA=0.0046;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233763020 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0010;AVGPOST=0.9984;RSQ=0.3487;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233763026 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0048;AVGPOST=0.9975;RSQ=0.8005;ERATE=0.0004;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233763034 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.7318;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233763121 . TAC T 13 PASS INDEL;BAVGPOST=0.998;BRSQ=0.479;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6082;ERATE=0.0003;THETA=0.0075;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233763126 . AGG A 19 PASS INDEL;BAVGPOST=0.999;BRSQ=0.573;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5771;ERATE=0.0004;THETA=0.0037;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233763195 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.776;LDAF=0.0043;AVGPOST=0.9984;RSQ=0.8262;ERATE=0.0005;THETA=0.0017;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233763215 rs72237773 ACTGACTCAGAAATT A 607 PASS INDEL;BAVGPOST=0.995;BRSQ=0.775;LDAF=0.0099;AVGPOST=0.9916;RSQ=0.6744;ERATE=0.0004;THETA=0.0049;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 233763298 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.590;LDAF=0.0044;AVGPOST=0.9962;RSQ=0.6669;ERATE=0.0004;THETA=0.0034;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233763425 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.623;LDAF=0.0056;AVGPOST=0.9969;RSQ=0.7566;ERATE=0.0004;THETA=0.0053;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 233763539 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.966;LDAF=0.8132;AVGPOST=0.9847;RSQ=0.9603;ERATE=0.0011;THETA=0.0009;AC=1784;AN=2184 GT:DS:GL:BD 0.81684983 1
1 233763557 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0038;AVGPOST=0.9983;RSQ=0.8116;ERATE=0.0004;THETA=0.0014;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233763573 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.718;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5721;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233763767 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.694;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233763770 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233763791 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0031;AVGPOST=0.9984;RSQ=0.7963;ERATE=0.0004;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233763813 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8424;ERATE=0.0004;THETA=0.0023;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233764079 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0211;AVGPOST=0.9997;RSQ=0.9939;ERATE=0.0003;THETA=0.0008;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 233764116 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0036;AVGPOST=0.9997;RSQ=0.9617;ERATE=0.0002;THETA=0.0016;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233764179 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233764223 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0219;AVGPOST=0.9986;RSQ=0.9746;ERATE=0.0003;THETA=0.0025;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 233764228 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.914;LDAF=0.0080;AVGPOST=0.9971;RSQ=0.8639;ERATE=0.0004;THETA=0.0011;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 233764370 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.762;LDAF=0.0025;AVGPOST=0.9975;RSQ=0.6003;ERATE=0.0008;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233764420 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5726;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233764451 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.977;LDAF=0.8226;AVGPOST=0.9908;RSQ=0.9756;ERATE=0.0006;THETA=0.0006;AC=1795;AN=2184 GT:DS:GL:BD 0.82188642 1
1 233764543 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0739;AVGPOST=0.9970;RSQ=0.9838;ERATE=0.0004;THETA=0.0013;AC=161;AN=2184 GT:DS:GL:BD 0.07371795 0
1 233764643 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.975;LDAF=0.0679;AVGPOST=0.9948;RSQ=0.9748;ERATE=0.0003;THETA=0.0012;AC=144;AN=2184 GT:DS:GL:BD 0.06593407 0
1 233764662 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0124;AVGPOST=0.9976;RSQ=0.9378;ERATE=0.0003;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 233764675 rs72038056 TTGG T 3019 PASS INDEL;BAVGPOST=0.996;BRSQ=0.922;LDAF=0.0280;AVGPOST=0.9937;RSQ=0.9170;ERATE=0.0003;THETA=0.0018;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 233764776 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0021;AVGPOST=0.9978;RSQ=0.6129;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233764833 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233764842 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.651;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.4944;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233764946 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6974;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233764979 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233765054 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7563;ERATE=0.0002;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233765071 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0097;AVGPOST=0.9998;RSQ=0.9909;ERATE=0.0002;THETA=0.0011;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 233765103 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9484;ERATE=0.0002;THETA=0.0020;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233765117 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7437;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233765161 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.4340;AVGPOST=0.9973;RSQ=0.9961;ERATE=0.0005;THETA=0.0012;AC=947;AN=2184 GT:DS:GL:BD 0.43360806 0
1 233765332 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.4228;AVGPOST=0.9969;RSQ=0.9953;ERATE=0.0005;THETA=0.0003;AC=923;AN=2184 GT:DS:GL:BD 0.42261904 0
1 233765397 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1621;AVGPOST=0.9988;RSQ=0.9971;ERATE=0.0004;THETA=0.0003;AC=354;AN=2184 GT:DS:GL:BD 0.16208792 0
1 233765473 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0074;AVGPOST=0.9997;RSQ=0.9835;ERATE=0.0002;THETA=0.0015;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 233765504 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0069;AVGPOST=0.9997;RSQ=0.9811;ERATE=0.0003;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 233765527 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.957;LDAF=0.0251;AVGPOST=0.9976;RSQ=0.9530;ERATE=0.0002;THETA=0.0008;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 233765588 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.887;LDAF=0.0303;AVGPOST=0.9901;RSQ=0.8777;ERATE=0.0005;THETA=0.0007;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 233765598 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1619;AVGPOST=0.9989;RSQ=0.9973;ERATE=0.0004;THETA=0.0004;AC=354;AN=2184 GT:DS:GL:BD 0.16208792 0
1 233765605 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0059;AVGPOST=0.9992;RSQ=0.9407;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 233765614 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.660;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5337;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233765646 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.765;LDAF=0.0018;AVGPOST=0.9985;RSQ=0.6370;ERATE=0.0006;THETA=0.0022;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233765660 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9843;ERATE=0.0002;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 233765688 rs34224953 A AG 15908 PASS INDEL;BAVGPOST=0.977;BRSQ=0.880;LDAF=0.1071;AVGPOST=0.9624;RSQ=0.8548;ERATE=0.0098;THETA=0.0005;AC=209;AN=2184 GT:DS:GL:BD 0.09569597 0
1 233765691 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3657;AVGPOST=0.9971;RSQ=0.9961;ERATE=0.0007;THETA=0.0002;AC=801;AN=2184 GT:DS:GL:BD 0.36675823 0
1 233765786 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0025;AVGPOST=0.9991;RSQ=0.8410;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233765821 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233765849 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4393;AVGPOST=0.9970;RSQ=0.9954;ERATE=0.0008;THETA=0.0003;AC=958;AN=2184 GT:DS:GL:BD 0.43864468 0
1 233765869 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0044;AVGPOST=0.9991;RSQ=0.9225;ERATE=0.0002;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233765909 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0095;AVGPOST=0.9988;RSQ=0.9549;ERATE=0.0002;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 233765971 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0070;AVGPOST=0.9997;RSQ=0.9814;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 233765976 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0210;AVGPOST=0.9997;RSQ=0.9934;ERATE=0.0003;THETA=0.0004;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 233766011 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.0040;AVGPOST=0.9990;RSQ=0.8843;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233766050 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8116;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233766223 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.773;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.8032;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233766251 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2419;AVGPOST=0.9989;RSQ=0.9975;ERATE=0.0002;THETA=0.0003;AC=528;AN=2184 GT:DS:GL:BD 0.24175824 0
1 233766264 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0881;AVGPOST=0.9990;RSQ=0.9962;ERATE=0.0002;THETA=0.0010;AC=192;AN=2184 GT:DS:GL:BD 0.08791209 0
1 233766373 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233766377 . AT A 84 PASS INDEL;BAVGPOST=1.000;BRSQ=0.648;LDAF=0.0053;AVGPOST=0.9968;RSQ=0.7438;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 233766392 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9770;ERATE=0.0002;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 233766410 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0281;AVGPOST=0.9995;RSQ=0.9908;ERATE=0.0003;THETA=0.0008;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 233766424 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0099;AVGPOST=0.9996;RSQ=0.9865;ERATE=0.0002;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 233766475 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.982;LDAF=0.0744;AVGPOST=0.9988;RSQ=0.9935;ERATE=0.0003;THETA=0.0004;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 233766490 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8928;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233766652 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.701;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233766695 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.4061;AVGPOST=0.9957;RSQ=0.9939;ERATE=0.0011;THETA=0.0004;AC=885;AN=2184 GT:DS:GL:BD 0.40521979 0
1 233766851 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8190;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233766873 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0470;AVGPOST=0.9986;RSQ=0.9883;ERATE=0.0003;THETA=0.0003;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 233766971 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233767008 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4048;AVGPOST=0.9994;RSQ=0.9991;ERATE=0.0003;THETA=0.0004;AC=884;AN=2184 GT:DS:GL:BD 0.40476191 0
1 233767023 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4048;AVGPOST=0.9995;RSQ=0.9993;ERATE=0.0003;THETA=0.0003;AC=884;AN=2184 GT:DS:GL:BD 0.40476191 0
1 233767033 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0097;AVGPOST=0.9997;RSQ=0.9864;ERATE=0.0003;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 233767059 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4049;AVGPOST=0.9995;RSQ=0.9992;ERATE=0.0002;THETA=0.0003;AC=884;AN=2184 GT:DS:GL:BD 0.40476191 0
1 233767105 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0723;AVGPOST=0.9995;RSQ=0.9977;ERATE=0.0002;THETA=0.0003;AC=157;AN=2184 GT:DS:GL:BD 0.07188645 0
1 233767158 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233767186 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8692;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233767357 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233767369 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6738;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233767433 . TC T 950 PASS INDEL;BAVGPOST=0.999;BRSQ=0.950;LDAF=0.0090;AVGPOST=0.9968;RSQ=0.8555;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 233767556 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.3927;AVGPOST=0.9948;RSQ=0.9929;ERATE=0.0006;THETA=0.0008;AC=858;AN=2184 GT:DS:GL:BD 0.39285713 0
1 233767649 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0279;AVGPOST=0.9995;RSQ=0.9914;ERATE=0.0003;THETA=0.0004;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 233767790 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233767800 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.845;LDAF=0.0037;AVGPOST=0.9986;RSQ=0.8501;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233767807 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0024;AVGPOST=0.9992;RSQ=0.8577;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233767808 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0076;AVGPOST=0.9994;RSQ=0.9690;ERATE=0.0003;THETA=0.0008;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 233767905 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8645;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233768064 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.883;LDAF=0.0114;AVGPOST=0.9958;RSQ=0.8640;ERATE=0.0004;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 233768187 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3965;AVGPOST=0.9967;RSQ=0.9954;ERATE=0.0004;THETA=0.0026;AC=864;AN=2184 GT:DS:GL:BD 0.39560440 0
1 233768189 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0054;AVGPOST=0.9985;RSQ=0.8900;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 233768334 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9282;ERATE=0.0002;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233768438 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.873;LDAF=0.0074;AVGPOST=0.9984;RSQ=0.9078;ERATE=0.0006;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 233768441 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7098;ERATE=0.0016;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233768488 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0075;AVGPOST=0.9996;RSQ=0.9773;ERATE=0.0002;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 233768498 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0018;AVGPOST=0.9995;RSQ=0.8761;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233768709 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0725;AVGPOST=0.9992;RSQ=0.9953;ERATE=0.0004;THETA=0.0008;AC=157;AN=2184 GT:DS:GL:BD 0.07188645 0
1 233768803 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233768833 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0032;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233768954 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.655;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7835;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233768990 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.1511;AVGPOST=0.9965;RSQ=0.9901;ERATE=0.0003;THETA=0.0004;AC=330;AN=2184 GT:DS:GL:BD 0.15109891 0
1 233769011 . TAAAC T 688 PASS INDEL;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0078;AVGPOST=0.9982;RSQ=0.9076;ERATE=0.0002;THETA=0.0008;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 233769045 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0074;AVGPOST=0.9998;RSQ=0.9853;ERATE=0.0002;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 233769105 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6602;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233769118 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7458;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233769221 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0649;AVGPOST=0.9981;RSQ=0.9895;ERATE=0.0004;THETA=0.0046;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 233769663 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.984;LDAF=0.1590;AVGPOST=0.9950;RSQ=0.9860;ERATE=0.0006;THETA=0.0025;AC=345;AN=2184 GT:DS:GL:BD 0.15796703 0
1 233769749 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.822;LDAF=0.0051;AVGPOST=0.9984;RSQ=0.8606;ERATE=0.0004;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 233769776 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6441;ERATE=0.0003;THETA=0.0040;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233769819 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.719;LDAF=0.0035;AVGPOST=0.9965;RSQ=0.5681;ERATE=0.0009;THETA=0.0073;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233769830 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.958;BRSQ=0.912;LDAF=0.6819;AVGPOST=0.9165;RSQ=0.8538;ERATE=0.0065;THETA=0.0025;AC=1517;AN=2184 GT:DS:GL:BD 0.69459707 1
1 233769884 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.846;LDAF=0.0101;AVGPOST=0.9946;RSQ=0.7840;ERATE=0.0005;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 233770023 . GC G 62 PASS INDEL;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5169;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233770105 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.967;LDAF=0.4031;AVGPOST=0.9786;RSQ=0.9659;ERATE=0.0010;THETA=0.0020;AC=874;AN=2184 GT:DS:GL:BD 0.40018314 0
1 233770114 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0214;AVGPOST=0.9981;RSQ=0.9707;ERATE=0.0003;THETA=0.0088;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 233770360 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0061;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233770387 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0848;AVGPOST=0.9979;RSQ=0.9903;ERATE=0.0003;THETA=0.0106;AC=183;AN=2184 GT:DS:GL:BD 0.08379121 0
1 233770388 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0077;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233770463 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5842;ERATE=0.0003;THETA=0.0054;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233770605 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7572;ERATE=0.0003;THETA=0.0084;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233770840 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0049;AVGPOST=0.9986;RSQ=0.8929;ERATE=0.0003;THETA=0.0045;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 233770847 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.968;LDAF=0.0528;AVGPOST=0.9946;RSQ=0.9597;ERATE=0.0004;THETA=0.0111;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 233770859 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6272;ERATE=0.0004;THETA=0.0218;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233770865 rs11346791 TC T 3906 PASS INDEL;BAVGPOST=0.991;BRSQ=0.857;LDAF=0.0285;AVGPOST=0.9914;RSQ=0.8791;ERATE=0.0005;THETA=0.0206;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 233770932 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0019;AVGPOST=0.9985;RSQ=0.7013;ERATE=0.0004;THETA=0.0216;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233771049 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6907;ERATE=0.0003;THETA=0.0106;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233771247 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.964;BRSQ=0.941;LDAF=0.4394;AVGPOST=0.9570;RSQ=0.9409;ERATE=0.0048;THETA=0.0054;AC=959;AN=2184 GT:DS:GL:BD 0.43910256 0
1 233771275 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.964;BRSQ=0.912;LDAF=0.1842;AVGPOST=0.9688;RSQ=0.9328;ERATE=0.0011;THETA=0.0011;AC=399;AN=2184 GT:DS:GL:BD 0.18269230 0
1 233771306 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.898;LDAF=0.0821;AVGPOST=0.9846;RSQ=0.9271;ERATE=0.0010;THETA=0.0114;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 233771381 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.780;LDAF=0.0023;AVGPOST=0.9980;RSQ=0.6326;ERATE=0.0011;THETA=0.0073;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233771517 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.958;LDAF=0.0696;AVGPOST=0.9921;RSQ=0.9597;ERATE=0.0005;THETA=0.0154;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 233771610 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5303;ERATE=0.0003;THETA=0.0045;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233771619 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.987;LDAF=0.1328;AVGPOST=0.9952;RSQ=0.9838;ERATE=0.0004;THETA=0.0032;AC=288;AN=2184 GT:DS:GL:BD 0.13186814 0
1 233771760 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.956;LDAF=0.0215;AVGPOST=0.9975;RSQ=0.9554;ERATE=0.0008;THETA=0.0015;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 233771761 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.939;LDAF=0.0221;AVGPOST=0.9979;RSQ=0.9610;ERATE=0.0002;THETA=0.0079;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 233771775 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8681;ERATE=0.0002;THETA=0.0030;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233771779 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.527;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7220;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233771854 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1628;AVGPOST=0.9971;RSQ=0.9933;ERATE=0.0003;THETA=0.0007;AC=356;AN=2184 GT:DS:GL:BD 0.16300367 0
1 233771870 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8864;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233771872 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0068;AVGPOST=0.9991;RSQ=0.9480;ERATE=0.0002;THETA=0.0009;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 233771891 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233771906 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233771932 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0071;AVGPOST=0.9995;RSQ=0.9775;ERATE=0.0002;THETA=0.0018;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 233772051 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7775;ERATE=0.0002;THETA=0.0026;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233772058 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7150;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233772064 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0131;AVGPOST=0.9989;RSQ=0.9635;ERATE=0.0003;THETA=0.0009;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 233772065 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0126;AVGPOST=0.9989;RSQ=0.9671;ERATE=0.0003;THETA=0.0019;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 233772083 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8156;ERATE=0.0002;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233772103 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9829;ERATE=0.0002;THETA=0.0047;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 233772157 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0082;AVGPOST=0.9991;RSQ=0.9628;ERATE=0.0002;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 233772247 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0041;AVGPOST=0.9996;RSQ=0.9608;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233772291 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1777;AVGPOST=0.9991;RSQ=0.9974;ERATE=0.0003;THETA=0.0008;AC=387;AN=2184 GT:DS:GL:BD 0.17719780 0
1 233772385 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0168;AVGPOST=0.9984;RSQ=0.9679;ERATE=0.0003;THETA=0.0005;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 233772429 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0004;THETA=0.0021;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233772450 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7406;ERATE=0.0002;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233772522 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.885;LDAF=0.0071;AVGPOST=0.9975;RSQ=0.8713;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 233772710 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.967;BRSQ=0.945;LDAF=0.5079;AVGPOST=0.9824;RSQ=0.9737;ERATE=0.0006;THETA=0.0005;AC=1120;AN=2184 GT:DS:GL:BD 0.51282054 1
1 233772776 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.951;BRSQ=0.883;LDAF=0.7056;AVGPOST=0.9221;RSQ=0.8539;ERATE=0.0164;THETA=0.0020;AC=1575;AN=2184 GT:DS:GL:BD 0.72115386 1
1 233772941 rs35376010 C CA 2177 PASS INDEL;BAVGPOST=0.645;BRSQ=0.336;LDAF=0.4370;AVGPOST=0.6632;RSQ=0.4034;ERATE=0.0450;THETA=0.0005;AC=846;AN=2184 GT:DS:GL:BD 0.38736263 0
1 233773013 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6978;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233773020 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6037;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233773038 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.647;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5709;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233773183 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.826;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9429;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233773246 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.926;LDAF=0.0116;AVGPOST=0.9983;RSQ=0.9364;ERATE=0.0003;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 233773286 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0210;AVGPOST=1.0000;RSQ=0.9990;ERATE=0.0002;THETA=0.0008;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 233773317 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.1811;AVGPOST=0.9993;RSQ=0.9980;ERATE=0.0003;THETA=0.0004;AC=396;AN=2184 GT:DS:GL:BD 0.18131869 0
1 233773371 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0212;AVGPOST=0.9996;RSQ=0.9918;ERATE=0.0004;THETA=0.0004;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 233773429 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8345;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233773444 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.8398;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233773554 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0065;AVGPOST=0.9997;RSQ=0.9798;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 233773591 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.1881;AVGPOST=0.9970;RSQ=0.9941;ERATE=0.0003;THETA=0.0002;AC=411;AN=2184 GT:DS:GL:BD 0.18818681 0
1 233773638 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1781;AVGPOST=0.9985;RSQ=0.9962;ERATE=0.0004;THETA=0.0038;AC=388;AN=2184 GT:DS:GL:BD 0.17765568 0
1 233773685 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5867;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233773771 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.827;LDAF=0.0078;AVGPOST=0.9956;RSQ=0.7863;ERATE=0.0005;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 233773774 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1777;AVGPOST=0.9986;RSQ=0.9963;ERATE=0.0004;THETA=0.0006;AC=388;AN=2184 GT:DS:GL:BD 0.17765568 0
1 233773888 . TG T 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0019;AVGPOST=0.9983;RSQ=0.6112;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233773990 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233774065 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.937;LDAF=0.0195;AVGPOST=0.9979;RSQ=0.9563;ERATE=0.0003;THETA=0.0005;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 233774152 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0402;AVGPOST=0.9979;RSQ=0.9752;ERATE=0.0004;THETA=0.0004;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 233774229 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0128;AVGPOST=0.9993;RSQ=0.9805;ERATE=0.0002;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 233774275 . CTG C 940 PASS INDEL;BAVGPOST=0.996;BRSQ=0.846;LDAF=0.0123;AVGPOST=0.9960;RSQ=0.8731;ERATE=0.0003;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 233774307 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5922;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233774371 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.986;LDAF=0.3011;AVGPOST=0.9912;RSQ=0.9852;ERATE=0.0005;THETA=0.0023;AC=659;AN=2184 GT:DS:GL:BD 0.30173993 0
1 233774429 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0134;AVGPOST=0.9995;RSQ=0.9803;ERATE=0.0003;THETA=0.0002;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 233774491 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5035;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233774505 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.912;LDAF=0.0128;AVGPOST=0.9986;RSQ=0.9555;ERATE=0.0004;THETA=0.0002;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 233774533 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8416;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233774649 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.896;LDAF=0.9977;AVGPOST=0.9990;RSQ=0.8179;ERATE=0.0002;THETA=0.0007;AC=2180;AN=2184 GT:DS:GL:BD 0.99816847 1
1 233774653 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0035;AVGPOST=0.9982;RSQ=0.8270;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233774670 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0020;AVGPOST=0.9982;RSQ=0.6486;ERATE=0.0006;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233774734 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.933;LDAF=0.0136;AVGPOST=0.9972;RSQ=0.9253;ERATE=0.0004;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 233774740 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8363;ERATE=0.0004;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233774803 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8616;ERATE=0.0003;THETA=0.0027;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233774988 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6527;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233775049 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0028;AVGPOST=0.9991;RSQ=0.8680;ERATE=0.0002;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233775264 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0097;AVGPOST=0.9980;RSQ=0.9254;ERATE=0.0004;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 233775350 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6530;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233775352 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.2716;AVGPOST=0.9967;RSQ=0.9930;ERATE=0.0003;THETA=0.0029;AC=593;AN=2184 GT:DS:GL:BD 0.27152014 0
1 233775357 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3199;AVGPOST=0.9966;RSQ=0.9934;ERATE=0.0004;THETA=0.0016;AC=700;AN=2184 GT:DS:GL:BD 0.32051283 0
1 233775380 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7766;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233775479 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.4385;AVGPOST=0.9970;RSQ=0.9952;ERATE=0.0004;THETA=0.0002;AC=959;AN=2184 GT:DS:GL:BD 0.43910256 0
1 233775512 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4392;AVGPOST=0.9971;RSQ=0.9953;ERATE=0.0005;THETA=0.0002;AC=959;AN=2184 GT:DS:GL:BD 0.43910256 0
1 233775522 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9181;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233775543 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7428;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233775544 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8674;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233775546 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0105;AVGPOST=0.9992;RSQ=0.9752;ERATE=0.0002;THETA=0.0001;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 233775592 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0160;AVGPOST=0.9991;RSQ=0.9814;ERATE=0.0002;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 233775600 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5888;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233775790 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4967;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233775918 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1799;AVGPOST=0.9987;RSQ=0.9966;ERATE=0.0002;THETA=0.0006;AC=392;AN=2184 GT:DS:GL:BD 0.17948718 0
1 233775993 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0139;AVGPOST=0.9995;RSQ=0.9844;ERATE=0.0003;THETA=0.0015;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 233776017 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0064;AVGPOST=0.9995;RSQ=0.9703;ERATE=0.0003;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 233776048 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1365;AVGPOST=0.9956;RSQ=0.9878;ERATE=0.0004;THETA=0.0002;AC=299;AN=2184 GT:DS:GL:BD 0.13690476 0
1 233776085 . TAAAG T 141 PASS INDEL;BAVGPOST=1.000;BRSQ=0.709;LDAF=0.0036;AVGPOST=0.9964;RSQ=0.5842;ERATE=0.0005;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233776387 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233776458 . CTCTT C 1741 PASS INDEL;BAVGPOST=0.998;BRSQ=0.917;LDAF=0.0130;AVGPOST=0.9990;RSQ=0.9682;ERATE=0.0003;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 233776459 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0053;AVGPOST=0.9972;RSQ=0.8104;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 233776491 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0116;AVGPOST=0.9995;RSQ=0.9793;ERATE=0.0003;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 233776623 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.3045;AVGPOST=0.9970;RSQ=0.9945;ERATE=0.0004;THETA=0.0003;AC=665;AN=2184 GT:DS:GL:BD 0.30448717 0
1 233776793 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6295;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233776794 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8384;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233776877 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0196;AVGPOST=0.9992;RSQ=0.9829;ERATE=0.0003;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 233776883 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5640;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233776906 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0063;AVGPOST=0.9988;RSQ=0.9202;ERATE=0.0002;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 233777072 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0032;AVGPOST=0.9998;RSQ=0.9731;ERATE=0.0003;THETA=0.0044;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233777138 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.994;LDAF=0.4091;AVGPOST=0.9972;RSQ=0.9955;ERATE=0.0005;THETA=0.0008;AC=896;AN=2184 GT:DS:GL:BD 0.41025642 0
1 233777149 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.665;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7163;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233777256 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.873;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9319;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233777327 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233777426 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0191;AVGPOST=0.9982;RSQ=0.9620;ERATE=0.0003;THETA=0.0026;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 233777474 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0157;AVGPOST=0.9995;RSQ=0.9890;ERATE=0.0002;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 233777529 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233777555 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8874;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233777603 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3415;AVGPOST=0.9985;RSQ=0.9973;ERATE=0.0004;THETA=0.0007;AC=746;AN=2184 GT:DS:GL:BD 0.34157509 0
1 233777641 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233777708 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.830;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7724;ERATE=0.0004;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233777833 rs34132676 CAGAG C 28082 PASS INDEL;BAVGPOST=0.991;BRSQ=0.973;LDAF=0.1726;AVGPOST=0.9940;RSQ=0.9844;ERATE=0.0016;THETA=0.0001;AC=375;AN=2184 GT:DS:GL:BD 0.17170329 0
1 233777859 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8786;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233777863 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233777916 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233778100 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5691;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233778102 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7565;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233778103 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0441;AVGPOST=0.9988;RSQ=0.9897;ERATE=0.0004;THETA=0.0001;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 233778195 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3341;AVGPOST=0.9986;RSQ=0.9977;ERATE=0.0003;THETA=0.0001;AC=729;AN=2184 GT:DS:GL:BD 0.33379120 0
1 233778228 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0416;AVGPOST=0.9998;RSQ=0.9981;ERATE=0.0003;THETA=0.0012;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 233778282 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9452;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233778462 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.708;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.7144;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233778481 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0020;AVGPOST=0.9985;RSQ=0.7239;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233778495 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.1170;AVGPOST=0.9979;RSQ=0.9937;ERATE=0.0003;THETA=0.0002;AC=257;AN=2184 GT:DS:GL:BD 0.11767399 0
1 233778502 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.7380;AVGPOST=0.9987;RSQ=0.9969;ERATE=0.0004;THETA=0.0004;AC=1612;AN=2184 GT:DS:GL:BD 0.73809522 1
1 233778517 . A AT 1464 PASS INDEL;BAVGPOST=0.969;BRSQ=0.691;LDAF=0.0722;AVGPOST=0.9356;RSQ=0.6157;ERATE=0.0163;THETA=0.0003;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 233778664 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0135;AVGPOST=0.9971;RSQ=0.9108;ERATE=0.0005;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 233778695 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.935;LDAF=0.0428;AVGPOST=0.9972;RSQ=0.9743;ERATE=0.0005;THETA=0.0004;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 233778712 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0063;AVGPOST=0.9958;RSQ=0.7391;ERATE=0.0005;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 233778736 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.1054;AVGPOST=0.9989;RSQ=0.9952;ERATE=0.0004;THETA=0.0004;AC=229;AN=2184 GT:DS:GL:BD 0.10485348 0
1 233779010 . GACT G 142 PASS INDEL;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6313;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233779116 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0248;AVGPOST=0.9997;RSQ=0.9948;ERATE=0.0002;THETA=0.0003;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 233779124 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7497;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233779147 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0233;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 233779151 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8702;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233779220 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8749;ERATE=0.0002;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233779232 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7210;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233779234 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233779433 rs11323437 CT C 27105 PASS INDEL;BAVGPOST=0.982;BRSQ=0.975;LDAF=0.3426;AVGPOST=0.9963;RSQ=0.9939;ERATE=0.0005;THETA=0.0003;AC=749;AN=2184 GT:DS:GL:BD 0.34294870 0
1 233779435 . TA T 5142 PASS INDEL;BAVGPOST=0.970;BRSQ=0.951;LDAF=0.3266;AVGPOST=0.9682;RSQ=0.9528;ERATE=0.0020;THETA=0.0006;AC=727;AN=2184 GT:DS:GL:BD 0.33287546 0
1 233779443 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0112;AVGPOST=0.9995;RSQ=0.9768;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 233779480 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0068;AVGPOST=0.9991;RSQ=0.9391;ERATE=0.0004;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 233779544 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0128;AVGPOST=0.9979;RSQ=0.9245;ERATE=0.0003;THETA=0.0001;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 233779612 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0026;AVGPOST=0.9991;RSQ=0.8527;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233779642 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6981;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233779654 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6729;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233779802 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6816;AVGPOST=0.9979;RSQ=0.9956;ERATE=0.0005;THETA=0.0004;AC=1489;AN=2184 GT:DS:GL:BD 0.68177658 1
1 233779824 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.868;LDAF=0.0148;AVGPOST=0.9947;RSQ=0.8751;ERATE=0.0003;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 233779848 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4520;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233779914 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233780117 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8794;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233780143 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.7268;ERATE=0.0002;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233780397 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0036;AVGPOST=0.9993;RSQ=0.9093;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233780415 rs113927451 AAACCAGGGG A 24949 PASS INDEL;BAVGPOST=0.991;BRSQ=0.967;LDAF=0.1218;AVGPOST=0.9945;RSQ=0.9834;ERATE=0.0008;THETA=0.0003;AC=266;AN=2184 GT:DS:GL:BD 0.12179487 0
1 233780434 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7026;AVGPOST=0.9977;RSQ=0.9953;ERATE=0.0004;THETA=0.0007;AC=1535;AN=2184 GT:DS:GL:BD 0.70283884 1
1 233780638 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.3503;AVGPOST=0.9970;RSQ=0.9953;ERATE=0.0004;THETA=0.0002;AC=764;AN=2184 GT:DS:GL:BD 0.34981686 0
1 233780698 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.977;LDAF=0.0437;AVGPOST=0.9982;RSQ=0.9845;ERATE=0.0003;THETA=0.0003;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 233780764 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.951;LDAF=0.0142;AVGPOST=0.9970;RSQ=0.9097;ERATE=0.0007;THETA=0.0002;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 233780991 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9094;ERATE=0.0002;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233781050 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.881;LDAF=0.0088;AVGPOST=0.9965;RSQ=0.8402;ERATE=0.0003;THETA=0.0051;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 233781085 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0193;AVGPOST=0.9998;RSQ=0.9947;ERATE=0.0003;THETA=0.0014;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 233781161 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.1155;AVGPOST=0.9978;RSQ=0.9929;ERATE=0.0004;THETA=0.0003;AC=252;AN=2184 GT:DS:GL:BD 0.11538462 0
1 233781334 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.3227;AVGPOST=0.9975;RSQ=0.9960;ERATE=0.0004;THETA=0.0003;AC=705;AN=2184 GT:DS:GL:BD 0.32280219 0
1 233781551 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0020;AVGPOST=0.9992;RSQ=0.8240;ERATE=0.0003;THETA=0.0015;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233781554 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0239;AVGPOST=0.9988;RSQ=0.9810;ERATE=0.0003;THETA=0.0005;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 233781786 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7756;ERATE=0.0002;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233781800 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0002;THETA=0.0041;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233781851 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0023;AVGPOST=0.9994;RSQ=0.8905;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233781856 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9647;ERATE=0.0002;THETA=0.0092;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233781868 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0077;AVGPOST=0.9991;RSQ=0.9581;ERATE=0.0003;THETA=0.0009;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 233781869 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8036;ERATE=0.0002;THETA=0.0088;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233782021 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5277;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233782052 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.2099;AVGPOST=0.9951;RSQ=0.9899;ERATE=0.0004;THETA=0.0060;AC=456;AN=2184 GT:DS:GL:BD 0.20879121 0
1 233782113 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0033;AVGPOST=0.9994;RSQ=0.9156;ERATE=0.0004;THETA=0.0035;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233782116 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6978;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233782133 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0417;AVGPOST=0.9997;RSQ=0.9970;ERATE=0.0002;THETA=0.0061;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 233782154 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.975;LDAF=0.1535;AVGPOST=0.9936;RSQ=0.9807;ERATE=0.0005;THETA=0.0019;AC=335;AN=2184 GT:DS:GL:BD 0.15338828 0
1 233782353 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.989;LDAF=0.2125;AVGPOST=0.9937;RSQ=0.9866;ERATE=0.0005;THETA=0.0006;AC=463;AN=2184 GT:DS:GL:BD 0.21199633 0
1 233782364 . GGAAGGTCT G 345 PASS INDEL;BAVGPOST=0.999;BRSQ=0.798;LDAF=0.0020;AVGPOST=0.9991;RSQ=0.8088;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233782583 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5897;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233782795 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0041;AVGPOST=1.0000;RSQ=0.9946;ERATE=0.0002;THETA=0.0050;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233782841 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0059;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233782896 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1721;AVGPOST=0.9974;RSQ=0.9934;ERATE=0.0004;THETA=0.0003;AC=374;AN=2184 GT:DS:GL:BD 0.17124543 0
1 233782956 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8468;ERATE=0.0006;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233782986 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.6973;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233783067 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3299;AVGPOST=0.9993;RSQ=0.9985;ERATE=0.0004;THETA=0.0003;AC=720;AN=2184 GT:DS:GL:BD 0.32967034 0
1 233783131 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8617;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233783206 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6334;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233783210 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5413;AVGPOST=0.9980;RSQ=0.9963;ERATE=0.0006;THETA=0.0002;AC=1182;AN=2184 GT:DS:GL:BD 0.54120880 1
1 233783223 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=0.9985;RSQ=0.7052;ERATE=0.0006;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233783240 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.741;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8916;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233783669 . A AG 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6220;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233783711 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.974;LDAF=0.0376;AVGPOST=0.9944;RSQ=0.9478;ERATE=0.0004;THETA=0.0002;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 233783712 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.980;LDAF=0.0363;AVGPOST=0.9963;RSQ=0.9644;ERATE=0.0002;THETA=0.0003;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 233783794 . ATAT A 311 PASS INDEL;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233783873 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0126;AVGPOST=0.9989;RSQ=0.9627;ERATE=0.0002;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 233784013 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233784133 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0421;AVGPOST=1.0000;RSQ=0.9995;ERATE=0.0002;THETA=0.0002;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 233784222 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.3761;AVGPOST=0.9992;RSQ=0.9985;ERATE=0.0003;THETA=0.0004;AC=821;AN=2184 GT:DS:GL:BD 0.37591577 0
1 233784296 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0179;AVGPOST=0.9979;RSQ=0.9594;ERATE=0.0004;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 233784401 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233784460 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0139;AVGPOST=0.9983;RSQ=0.9502;ERATE=0.0004;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 233784522 . AG A 159 PASS INDEL;BAVGPOST=0.997;BRSQ=0.676;LDAF=0.0080;AVGPOST=0.9948;RSQ=0.7201;ERATE=0.0008;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 233784574 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.703;LDAF=0.0023;AVGPOST=0.9974;RSQ=0.5230;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233784588 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.980;LDAF=0.7178;AVGPOST=0.9920;RSQ=0.9833;ERATE=0.0014;THETA=0.0002;AC=1569;AN=2184 GT:DS:GL:BD 0.71840662 1
1 233784674 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0040;AVGPOST=0.9992;RSQ=0.9137;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233784816 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0043;AVGPOST=0.9989;RSQ=0.8938;ERATE=0.0002;THETA=0.0001;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233784951 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0243;AVGPOST=0.9997;RSQ=0.9950;ERATE=0.0003;THETA=0.0002;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 233785159 . T TG 1647 PASS INDEL;BAVGPOST=0.998;BRSQ=0.967;LDAF=0.0309;AVGPOST=0.9966;RSQ=0.9602;ERATE=0.0003;THETA=0.0002;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 233785161 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.961;LDAF=0.0312;AVGPOST=0.9959;RSQ=0.9501;ERATE=0.0004;THETA=0.0002;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 233785161 . CA C 1086 PASS INDEL;BAVGPOST=0.998;BRSQ=0.967;LDAF=0.0312;AVGPOST=0.9958;RSQ=0.9500;ERATE=0.0002;THETA=0.0001;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 233785162 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.968;LDAF=0.0308;AVGPOST=0.9965;RSQ=0.9587;ERATE=0.0003;THETA=0.0004;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 233785203 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233785248 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0042;AVGPOST=0.9997;RSQ=0.9688;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233785270 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.791;LDAF=0.0036;AVGPOST=0.9978;RSQ=0.7526;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233785471 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.6277;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233785533 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.788;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8710;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233785598 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233785641 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0199;AVGPOST=0.9995;RSQ=0.9912;ERATE=0.0002;THETA=0.0003;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 233785703 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9451;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233785716 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1750;AVGPOST=0.9989;RSQ=0.9968;ERATE=0.0002;THETA=0.0001;AC=381;AN=2184 GT:DS:GL:BD 0.17445055 0
1 233785755 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7417;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233785786 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=1.000;LDAF=0.5281;AVGPOST=0.9994;RSQ=0.9988;ERATE=0.0003;THETA=0.0003;AC=1154;AN=2184 GT:DS:GL:BD 0.52838826 1
1 233785959 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0193;AVGPOST=0.9997;RSQ=0.9953;ERATE=0.0002;THETA=0.0002;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 233786019 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9735;ERATE=0.0002;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 233786113 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.748;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233786142 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233786170 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6408;AVGPOST=0.9986;RSQ=0.9974;ERATE=0.0004;THETA=0.0002;AC=1400;AN=2184 GT:DS:GL:BD 0.64102566 1
1 233786273 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.3343;AVGPOST=0.9971;RSQ=0.9947;ERATE=0.0003;THETA=0.0003;AC=729;AN=2184 GT:DS:GL:BD 0.33379120 0
1 233786295 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233786300 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.991;LDAF=0.3297;AVGPOST=0.9979;RSQ=0.9960;ERATE=0.0004;THETA=0.0005;AC=720;AN=2184 GT:DS:GL:BD 0.32967034 0
1 233786335 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233786349 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6495;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233786448 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.951;LDAF=0.0382;AVGPOST=0.9963;RSQ=0.9623;ERATE=0.0003;THETA=0.0003;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 233786494 . C CA 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0029;AVGPOST=0.9957;RSQ=0.4163;ERATE=0.0008;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233786555 . A AC 25 PASS INDEL;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5699;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233786559 . AC A 2154 PASS INDEL;BAVGPOST=0.995;BRSQ=0.951;LDAF=0.0445;AVGPOST=0.9913;RSQ=0.9289;ERATE=0.0008;THETA=0.0002;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 233786597 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233786628 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0426;AVGPOST=0.9995;RSQ=0.9940;ERATE=0.0003;THETA=0.0002;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 233786782 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0245;AVGPOST=0.9995;RSQ=0.9921;ERATE=0.0003;THETA=0.0004;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 233786873 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8063;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233786882 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233786959 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0248;AVGPOST=0.9996;RSQ=0.9943;ERATE=0.0003;THETA=0.0002;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 233787020 . C CACG 477 PASS INDEL;BAVGPOST=0.999;BRSQ=0.758;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9107;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233787022 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8450;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233787130 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5836;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233787151 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0178;AVGPOST=0.9992;RSQ=0.9795;ERATE=0.0003;THETA=0.0002;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 233787485 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.693;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6386;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233787575 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6939;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233787661 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233787704 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7100;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233787875 . GA G 73 PASS INDEL;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6978;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233787964 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9652;ERATE=0.0002;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233787977 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233788000 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.973;LDAF=0.0380;AVGPOST=0.9972;RSQ=0.9689;ERATE=0.0003;THETA=0.0002;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 233788002 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3339;AVGPOST=0.9990;RSQ=0.9983;ERATE=0.0003;THETA=0.0003;AC=729;AN=2184 GT:DS:GL:BD 0.33379120 0
1 233788062 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0003;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233788316 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3328;AVGPOST=0.9994;RSQ=0.9987;ERATE=0.0004;THETA=0.0071;AC=726;AN=2184 GT:DS:GL:BD 0.33241758 0
1 233788500 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7425;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233788515 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233788904 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3157;AVGPOST=0.9979;RSQ=0.9968;ERATE=0.0004;THETA=0.0008;AC=687;AN=2184 GT:DS:GL:BD 0.31456044 0
1 233788942 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9451;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233789206 rs56300617 AACATT A 29850 PASS INDEL;BAVGPOST=0.993;BRSQ=0.986;LDAF=0.2192;AVGPOST=0.9931;RSQ=0.9856;ERATE=0.0007;THETA=0.0003;AC=481;AN=2184 GT:DS:GL:BD 0.22023809 0
1 233789251 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.685;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8702;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233789306 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.8974;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233789424 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7298;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233789500 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.7170;AVGPOST=0.9947;RSQ=0.9883;ERATE=0.0010;THETA=0.0005;AC=1568;AN=2184 GT:DS:GL:BD 0.71794873 1
1 233789527 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.720;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5643;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233789528 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4776;ERATE=0.0004;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233789565 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.903;LDAF=0.0053;AVGPOST=0.9966;RSQ=0.7872;ERATE=0.0005;THETA=0.0039;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233789651 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7077;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233789685 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7957;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233789760 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0056;AVGPOST=0.9979;RSQ=0.8533;ERATE=0.0004;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 233789809 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233789816 . CCT C 131 PASS INDEL;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5384;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233789819 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0360;AVGPOST=0.9992;RSQ=0.9916;ERATE=0.0003;THETA=0.0007;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 233789821 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.9094;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233789833 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0013;AVGPOST=0.9994;RSQ=0.8041;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233789851 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233789852 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0368;AVGPOST=0.9983;RSQ=0.9813;ERATE=0.0003;THETA=0.0029;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 233789948 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.7687;ERATE=0.0007;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233789964 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0106;AVGPOST=0.9983;RSQ=0.9335;ERATE=0.0003;THETA=0.0041;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 233790062 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.0915;AVGPOST=0.9980;RSQ=0.9920;ERATE=0.0002;THETA=0.0006;AC=200;AN=2184 GT:DS:GL:BD 0.09157509 0
1 233790107 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.962;LDAF=0.7053;AVGPOST=0.9660;RSQ=0.9341;ERATE=0.0050;THETA=0.0006;AC=1552;AN=2184 GT:DS:GL:BD 0.71062273 1
1 233790115 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.974;LDAF=0.4121;AVGPOST=0.9895;RSQ=0.9822;ERATE=0.0007;THETA=0.0006;AC=900;AN=2184 GT:DS:GL:BD 0.41208792 0
1 233790199 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7873;ERATE=0.0002;THETA=0.0024;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233790285 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.964;LDAF=0.3774;AVGPOST=0.9825;RSQ=0.9724;ERATE=0.0007;THETA=0.0191;AC=825;AN=2184 GT:DS:GL:BD 0.37774727 0
1 233790319 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.964;LDAF=0.0145;AVGPOST=0.9989;RSQ=0.9664;ERATE=0.0003;THETA=0.0128;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 233790646 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0057;AVGPOST=0.9995;RSQ=0.9591;ERATE=0.0002;THETA=0.0148;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 233790653 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.908;LDAF=0.0153;AVGPOST=0.9971;RSQ=0.9365;ERATE=0.0002;THETA=0.0070;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 233790830 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.958;LDAF=0.1660;AVGPOST=0.9856;RSQ=0.9627;ERATE=0.0009;THETA=0.0010;AC=355;AN=2184 GT:DS:GL:BD 0.16254579 0
1 233790847 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0039;AVGPOST=0.9953;RSQ=0.5541;ERATE=0.0006;THETA=0.0015;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233790976 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0153;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233791015 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.6181;ERATE=0.0002;THETA=0.0046;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233791226 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0399;AVGPOST=0.9998;RSQ=0.9974;ERATE=0.0002;THETA=0.0028;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 233791231 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0032;AVGPOST=0.9994;RSQ=0.9185;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233791294 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5526;ERATE=0.0004;THETA=0.0052;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233791392 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.898;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9734;ERATE=0.0003;THETA=0.0016;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233791469 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.975;LDAF=0.4772;AVGPOST=0.9807;RSQ=0.9699;ERATE=0.0025;THETA=0.0003;AC=1044;AN=2184 GT:DS:GL:BD 0.47802198 0
1 233791651 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.963;BRSQ=0.930;LDAF=0.4192;AVGPOST=0.9443;RSQ=0.9121;ERATE=0.0194;THETA=0.0052;AC=919;AN=2184 GT:DS:GL:BD 0.42078754 0
1 233791932 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6730;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233791963 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0428;AVGPOST=0.9991;RSQ=0.9929;ERATE=0.0003;THETA=0.0012;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 233792486 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.967;LDAF=0.1217;AVGPOST=0.9876;RSQ=0.9600;ERATE=0.0006;THETA=0.0078;AC=264;AN=2184 GT:DS:GL:BD 0.12087912 0
1 233792490 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.805;LDAF=0.0154;AVGPOST=0.9878;RSQ=0.7055;ERATE=0.0016;THETA=0.0002;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 233792500 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.754;LDAF=0.0040;AVGPOST=0.9963;RSQ=0.6689;ERATE=0.0003;THETA=0.0069;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233792610 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0084;AVGPOST=0.9996;RSQ=0.9795;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 233792694 . C CTT 116 PASS INDEL;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7534;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233792719 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.9178;ERATE=0.0003;THETA=0.0026;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233792968 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233793165 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5789;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233793175 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6322;ERATE=0.0003;THETA=0.0044;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233793180 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6107;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233793189 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.890;LDAF=0.0032;AVGPOST=0.9998;RSQ=0.9668;ERATE=0.0002;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233793393 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0164;AVGPOST=0.9987;RSQ=0.9630;ERATE=0.0004;THETA=0.0006;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 233793406 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.944;LDAF=0.0168;AVGPOST=0.9965;RSQ=0.9288;ERATE=0.0004;THETA=0.0025;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 233793408 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233793523 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0170;AVGPOST=0.9997;RSQ=0.9925;ERATE=0.0003;THETA=0.0044;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 233793771 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9280;ERATE=0.0002;THETA=0.0016;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233793788 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0065;AVGPOST=0.9997;RSQ=0.9798;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 233793813 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0077;AVGPOST=0.9988;RSQ=0.9256;ERATE=0.0005;THETA=0.0023;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 233793853 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8519;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233793902 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.628;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5252;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233793910 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0031;AVGPOST=0.9989;RSQ=0.8397;ERATE=0.0005;THETA=0.0017;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233793937 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6636;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233794123 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0034;AVGPOST=0.9977;RSQ=0.7201;ERATE=0.0004;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233794255 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4872;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233794323 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0088;AVGPOST=0.9997;RSQ=0.9825;ERATE=0.0003;THETA=0.0034;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 233794420 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0283;AVGPOST=0.9979;RSQ=0.9716;ERATE=0.0004;THETA=0.0034;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 233794459 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1792;AVGPOST=0.9983;RSQ=0.9960;ERATE=0.0003;THETA=0.0011;AC=391;AN=2184 GT:DS:GL:BD 0.17902930 0
1 233794603 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.968;LDAF=0.1431;AVGPOST=0.9951;RSQ=0.9862;ERATE=0.0005;THETA=0.0007;AC=311;AN=2184 GT:DS:GL:BD 0.14239927 0
1 233794672 . T TA 17 PASS INDEL;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6025;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233794791 . CACTTGTTT C 1037 PASS INDEL;BAVGPOST=0.998;BRSQ=0.786;LDAF=0.0040;AVGPOST=0.9985;RSQ=0.8267;ERATE=0.0005;THETA=0.0016;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233794839 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.987;LDAF=0.8519;AVGPOST=0.9927;RSQ=0.9746;ERATE=0.0006;THETA=0.0003;AC=1861;AN=2184 GT:DS:GL:BD 0.85210621 1
1 233794847 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0142;AVGPOST=0.9979;RSQ=0.9525;ERATE=0.0003;THETA=0.0010;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 233794936 . G GT 91 PASS INDEL;BAVGPOST=0.986;BRSQ=0.530;LDAF=0.0311;AVGPOST=0.9570;RSQ=0.4253;ERATE=0.0105;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 233794937 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.623;LDAF=0.0021;AVGPOST=0.9968;RSQ=0.3550;ERATE=0.0007;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233795015 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0020;AVGPOST=0.9983;RSQ=0.6290;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233795095 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0119;AVGPOST=0.9985;RSQ=0.9449;ERATE=0.0004;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 233795097 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0117;AVGPOST=0.9994;RSQ=0.9762;ERATE=0.0002;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 233795109 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.841;LDAF=0.0112;AVGPOST=0.9965;RSQ=0.8700;ERATE=0.0007;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 233795209 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0030;AVGPOST=0.9984;RSQ=0.7942;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233795221 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0202;AVGPOST=0.9987;RSQ=0.9704;ERATE=0.0004;THETA=0.0003;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 233795310 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2231;AVGPOST=0.9965;RSQ=0.9922;ERATE=0.0005;THETA=0.0005;AC=486;AN=2184 GT:DS:GL:BD 0.22252747 0
1 233795330 . TA T 622 PASS INDEL;BAVGPOST=0.997;BRSQ=0.878;LDAF=0.0091;AVGPOST=0.9965;RSQ=0.8421;ERATE=0.0006;THETA=0.0012;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 233795334 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0030;AVGPOST=0.9996;RSQ=0.9535;ERATE=0.0002;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233795357 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7520;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233795365 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7773;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233795432 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.809;LDAF=0.0045;AVGPOST=0.9968;RSQ=0.7302;ERATE=0.0012;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233795473 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.560;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7676;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233795527 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0030;AVGPOST=0.9990;RSQ=0.8642;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233795547 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8481;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233795550 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.9824;AVGPOST=0.9985;RSQ=0.9683;ERATE=0.0002;THETA=0.0003;AC=2147;AN=2184 GT:DS:GL:BD 0.98305863 1
1 233795673 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233795761 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0084;AVGPOST=0.9997;RSQ=0.9844;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 233795918 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.978;LDAF=0.0392;AVGPOST=0.9994;RSQ=0.9933;ERATE=0.0002;THETA=0.0002;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 233795944 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6371;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233796069 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0016;AVGPOST=0.9980;RSQ=0.5294;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233796116 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0064;AVGPOST=1.0000;RSQ=0.9966;ERATE=0.0002;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 233796173 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233796222 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233796287 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0168;AVGPOST=0.9991;RSQ=0.9813;ERATE=0.0003;THETA=0.0004;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 233796320 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233796337 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0032;AVGPOST=0.9997;RSQ=0.9532;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233796408 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6180;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233796621 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0027;AVGPOST=0.9995;RSQ=0.9255;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233796651 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.6749;AVGPOST=0.9962;RSQ=0.9928;ERATE=0.0005;THETA=0.0002;AC=1475;AN=2184 GT:DS:GL:BD 0.67536628 1
1 233796667 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233796682 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3251;AVGPOST=0.9977;RSQ=0.9955;ERATE=0.0004;THETA=0.0001;AC=709;AN=2184 GT:DS:GL:BD 0.32463369 0
1 233796747 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4908;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233796753 . A AT 255 PASS INDEL;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8197;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233796794 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233796801 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233796809 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0165;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 233796827 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9094;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233796954 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8061;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233796995 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0103;AVGPOST=0.9993;RSQ=0.9725;ERATE=0.0002;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 233797272 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233797286 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6844;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233797291 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7458;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233797319 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9335;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233797440 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0032;AVGPOST=0.9995;RSQ=0.9301;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233797726 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0021;AVGPOST=0.9987;RSQ=0.7597;ERATE=0.0006;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233797731 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0030;AVGPOST=0.9986;RSQ=0.8223;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233797733 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1875;AVGPOST=0.9968;RSQ=0.9921;ERATE=0.0009;THETA=0.0003;AC=408;AN=2184 GT:DS:GL:BD 0.18681319 0
1 233797771 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0065;AVGPOST=0.9998;RSQ=0.9865;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 233797829 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233797928 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6244;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233797953 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7841;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233797954 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.767;LDAF=0.0032;AVGPOST=0.9985;RSQ=0.8404;ERATE=0.0005;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233797972 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.801;LDAF=0.0085;AVGPOST=0.9941;RSQ=0.7503;ERATE=0.0014;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 233798017 rs55911020 TCTC T 18137 PASS INDEL;BAVGPOST=0.913;BRSQ=0.843;LDAF=0.4228;AVGPOST=0.8367;RSQ=0.7511;ERATE=0.0529;THETA=0.0002;AC=881;AN=2184 GT:DS:GL:BD 0.40338829 0
1 233798122 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233798240 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2249;AVGPOST=0.9965;RSQ=0.9922;ERATE=0.0004;THETA=0.0004;AC=492;AN=2184 GT:DS:GL:BD 0.22527473 0
1 233798413 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0031;AVGPOST=0.9994;RSQ=0.9167;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233798555 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4999;ERATE=0.0003;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233798594 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5970;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233798634 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6072;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233798818 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6919;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233798835 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233798847 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0046;AVGPOST=0.9997;RSQ=0.9725;ERATE=0.0002;THETA=0.0001;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 233799106 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9219;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233799108 . AT A 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0035;AVGPOST=0.9982;RSQ=0.7635;ERATE=0.0006;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233799331 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0007;AVGPOST=0.9991;RSQ=0.4654;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233799507 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0274;AVGPOST=0.9992;RSQ=0.9873;ERATE=0.0003;THETA=0.0011;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 233799509 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.8321;AVGPOST=0.9992;RSQ=0.9972;ERATE=0.0003;THETA=0.0004;AC=1817;AN=2184 GT:DS:GL:BD 0.83195972 1
1 233799575 . C CT 105 PASS INDEL;BAVGPOST=0.976;BRSQ=0.550;LDAF=0.0537;AVGPOST=0.9326;RSQ=0.4778;ERATE=0.0122;THETA=0.0004;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 233799609 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.687;LDAF=0.0107;AVGPOST=0.9959;RSQ=0.8611;ERATE=0.0005;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 233799659 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.880;LDAF=0.0017;AVGPOST=0.9988;RSQ=0.6818;ERATE=0.0007;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233799752 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.611;LDAF=0.0056;AVGPOST=0.9970;RSQ=0.7833;ERATE=0.0004;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 233799756 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.925;LDAF=0.0472;AVGPOST=0.9917;RSQ=0.9230;ERATE=0.0004;THETA=0.0002;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 233799818 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0015;AVGPOST=0.9990;RSQ=0.7338;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233799946 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233800082 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7232;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233800289 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0051;AVGPOST=0.9984;RSQ=0.8793;ERATE=0.0003;THETA=0.0001;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 233800337 . G GT 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233800350 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0065;AVGPOST=0.9977;RSQ=0.8594;ERATE=0.0002;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 233800404 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0004;AVGPOST=0.9995;RSQ=0.5285;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233800434 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.8993;ERATE=0.0002;THETA=0.0015;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233800484 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8324;AVGPOST=0.9989;RSQ=0.9963;ERATE=0.0004;THETA=0.0002;AC=1817;AN=2184 GT:DS:GL:BD 0.83195972 1
1 233800490 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0166;AVGPOST=0.9997;RSQ=0.9905;ERATE=0.0002;THETA=0.0039;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 233800600 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0199;AVGPOST=0.9994;RSQ=0.9855;ERATE=0.0002;THETA=0.0004;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 233800613 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3986;AVGPOST=0.9946;RSQ=0.9915;ERATE=0.0008;THETA=0.0002;AC=872;AN=2184 GT:DS:GL:BD 0.39926741 0
1 233800644 rs71837981 T TA 12823 PASS INDEL;BAVGPOST=0.996;BRSQ=0.989;LDAF=0.1649;AVGPOST=0.9960;RSQ=0.9890;ERATE=0.0005;THETA=0.0002;AC=360;AN=2184 GT:DS:GL:BD 0.16483517 0
1 233800655 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0062;AVGPOST=0.9995;RSQ=0.9609;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 233800776 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7966;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233800886 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.695;LDAF=0.0021;AVGPOST=0.9990;RSQ=0.7858;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233800919 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5882;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233801012 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233801124 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8648;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233801213 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7781;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233801231 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0166;AVGPOST=0.9997;RSQ=0.9910;ERATE=0.0003;THETA=0.0002;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 233801317 rs59467769 G GC 8758 PASS INDEL;BAVGPOST=0.894;BRSQ=0.784;LDAF=0.2998;AVGPOST=0.9044;RSQ=0.8424;ERATE=0.0206;THETA=0.0001;AC=673;AN=2184 GT:DS:GL:BD 0.30815017 0
1 233801436 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.0889;AVGPOST=0.9977;RSQ=0.9891;ERATE=0.0003;THETA=0.0002;AC=195;AN=2184 GT:DS:GL:BD 0.08928572 0
1 233801640 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0221;AVGPOST=0.9984;RSQ=0.9731;ERATE=0.0003;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 233801687 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0060;AVGPOST=0.9998;RSQ=0.9853;ERATE=0.0002;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 233801701 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3338;AVGPOST=0.9966;RSQ=0.9945;ERATE=0.0006;THETA=0.0002;AC=727;AN=2184 GT:DS:GL:BD 0.33287546 0
1 233801756 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8316;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233801779 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8039;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233801959 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0075;AVGPOST=0.9979;RSQ=0.9154;ERATE=0.0002;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 233802149 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233802181 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9822;ERATE=0.0002;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233802200 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233802225 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9181;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233802226 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9181;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233802285 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233802296 . CTT C 40 PASS INDEL;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7019;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233802456 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233802497 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0050;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0001;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 233802529 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0002;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 233802569 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233802582 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0002;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 233802585 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233802610 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233802779 . T TTTTA 3714 PASS INDEL;BAVGPOST=0.982;BRSQ=0.824;LDAF=0.0524;AVGPOST=0.9906;RSQ=0.9262;ERATE=0.0010;THETA=0.0003;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 233802811 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233802852 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.650;LDAF=0.0104;AVGPOST=0.9904;RSQ=0.6346;ERATE=0.0042;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 233802856 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1729;AVGPOST=0.9972;RSQ=0.9931;ERATE=0.0004;THETA=0.0001;AC=377;AN=2184 GT:DS:GL:BD 0.17261904 0
1 233802885 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1664;AVGPOST=0.9992;RSQ=0.9973;ERATE=0.0004;THETA=0.0003;AC=362;AN=2184 GT:DS:GL:BD 0.16575092 0
1 233802962 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.760;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233803032 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.726;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233803201 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0266;AVGPOST=0.9987;RSQ=0.9784;ERATE=0.0005;THETA=0.0005;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 233803275 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.925;LDAF=0.0323;AVGPOST=0.9852;RSQ=0.8198;ERATE=0.0012;THETA=0.0003;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 233803291 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.590;LDAF=0.0049;AVGPOST=0.9967;RSQ=0.7109;ERATE=0.0007;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233803326 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.667;LDAF=0.0146;AVGPOST=0.9825;RSQ=0.5533;ERATE=0.0009;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 233803332 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.496;LDAF=0.0100;AVGPOST=0.9920;RSQ=0.6758;ERATE=0.0012;THETA=0.0023;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 233803333 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.506;LDAF=0.0155;AVGPOST=0.9851;RSQ=0.6040;ERATE=0.0006;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 233803345 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.447;LDAF=0.0243;AVGPOST=0.9753;RSQ=0.6406;ERATE=0.0009;THETA=0.0002;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 233803462 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.963;BRSQ=0.892;LDAF=0.2203;AVGPOST=0.9303;RSQ=0.8504;ERATE=0.0064;THETA=0.0002;AC=455;AN=2184 GT:DS:GL:BD 0.20833333 0
1 233803592 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7766;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233803595 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0041;AVGPOST=0.9991;RSQ=0.8963;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233803613 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0086;AVGPOST=0.9988;RSQ=0.9486;ERATE=0.0003;THETA=0.0011;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 233803701 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0282;AVGPOST=0.9950;RSQ=0.9447;ERATE=0.0004;THETA=0.0004;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 233803785 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0027;AVGPOST=0.9974;RSQ=0.5880;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233803885 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0156;AVGPOST=0.9998;RSQ=0.9949;ERATE=0.0003;THETA=0.0002;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 233803937 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3236;AVGPOST=0.9984;RSQ=0.9968;ERATE=0.0006;THETA=0.0001;AC=707;AN=2184 GT:DS:GL:BD 0.32371795 0
1 233803982 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8205;AVGPOST=0.9990;RSQ=0.9967;ERATE=0.0004;THETA=0.0002;AC=1792;AN=2184 GT:DS:GL:BD 0.82051283 1
1 233804161 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6894;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233804170 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7797;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233804177 rs34855700 C CT 177 PASS INDEL;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0067;AVGPOST=0.9957;RSQ=0.7535;ERATE=0.0007;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 233804300 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7845;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233804388 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.982;LDAF=0.8277;AVGPOST=0.9766;RSQ=0.9377;ERATE=0.0034;THETA=0.0002;AC=1819;AN=2184 GT:DS:GL:BD 0.83287543 1
1 233804404 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.481;LDAF=0.0021;AVGPOST=0.9968;RSQ=0.3374;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233804507 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.717;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5441;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233804510 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.983;LDAF=0.2271;AVGPOST=0.9957;RSQ=0.9906;ERATE=0.0006;THETA=0.0003;AC=496;AN=2184 GT:DS:GL:BD 0.22710623 0
1 233804631 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.954;LDAF=0.0264;AVGPOST=0.9985;RSQ=0.9766;ERATE=0.0004;THETA=0.0004;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 233804672 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.953;LDAF=0.0158;AVGPOST=0.9994;RSQ=0.9836;ERATE=0.0004;THETA=0.0002;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 233804692 . T TG 71 PASS INDEL;BAVGPOST=0.999;BRSQ=0.778;LDAF=0.0023;AVGPOST=0.9984;RSQ=0.7225;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233805122 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8648;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233805137 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5611;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233805161 . AT A 169 PASS INDEL;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0038;AVGPOST=0.9947;RSQ=0.5049;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233805172 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2285;AVGPOST=0.9989;RSQ=0.9974;ERATE=0.0004;THETA=0.0002;AC=499;AN=2184 GT:DS:GL:BD 0.22847985 0
1 233805358 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0029;AVGPOST=0.9975;RSQ=0.6670;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233805391 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.5146;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233805479 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0016;AVGPOST=0.9982;RSQ=0.5414;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233805548 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233805551 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0394;AVGPOST=0.9998;RSQ=0.9978;ERATE=0.0002;THETA=0.0002;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 233805669 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0163;AVGPOST=0.9993;RSQ=0.9818;ERATE=0.0003;THETA=0.0002;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 233805704 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6366;AVGPOST=0.9991;RSQ=0.9982;ERATE=0.0004;THETA=0.0001;AC=1391;AN=2184 GT:DS:GL:BD 0.63690478 1
1 233805706 . GTTAA G 222 PASS INDEL;BAVGPOST=0.998;BRSQ=0.697;LDAF=0.0052;AVGPOST=0.9960;RSQ=0.6791;ERATE=0.0005;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233805751 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0010;AVGPOST=0.9987;RSQ=0.5981;ERATE=0.0002;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233805752 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7573;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233805762 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1724;AVGPOST=0.9975;RSQ=0.9928;ERATE=0.0007;THETA=0.0003;AC=376;AN=2184 GT:DS:GL:BD 0.17216118 0
1 233805864 . A AT 79 PASS INDEL;BAVGPOST=0.988;BRSQ=0.529;LDAF=0.0346;AVGPOST=0.9553;RSQ=0.4782;ERATE=0.0088;THETA=0.0003;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 233805987 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6362;AVGPOST=0.9984;RSQ=0.9968;ERATE=0.0008;THETA=0.0001;AC=1391;AN=2184 GT:DS:GL:BD 0.63690478 1
1 233806101 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0029;AVGPOST=0.9993;RSQ=0.8950;ERATE=0.0002;THETA=0.0001;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233806143 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233806149 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233806187 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9496;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233806324 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233806440 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0019;AVGPOST=0.9978;RSQ=0.4888;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233806478 . AT A 116 PASS INDEL;BAVGPOST=0.998;BRSQ=0.887;LDAF=0.0027;AVGPOST=0.9989;RSQ=0.8052;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233806671 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9141;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233806724 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0019;AVGPOST=0.9992;RSQ=0.8136;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233806736 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0075;AVGPOST=0.9989;RSQ=0.9412;ERATE=0.0002;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 233806747 . A AT 89 PASS INDEL;BAVGPOST=0.976;BRSQ=0.476;LDAF=0.0410;AVGPOST=0.9493;RSQ=0.4781;ERATE=0.0115;THETA=0.0002;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 233807014 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7608;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233807068 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233807077 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233807127 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233807173 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233807174 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9908;ERATE=0.0002;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 233807213 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233807256 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233807458 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8889;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233807465 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1733;AVGPOST=0.9997;RSQ=0.9990;ERATE=0.0002;THETA=0.0004;AC=378;AN=2184 GT:DS:GL:BD 0.17307693 0
1 233807469 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0206;AVGPOST=1.0000;RSQ=0.9990;ERATE=0.0002;THETA=0.0004;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 233807745 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6846;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233807866 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.805;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6263;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233807885 rs16360 CTA C 24586 PASS INDEL;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1731;AVGPOST=0.9978;RSQ=0.9937;ERATE=0.0004;THETA=0.0002;AC=378;AN=2184 GT:DS:GL:BD 0.17307693 0
1 233807888 . TAG T 5720 PASS INDEL;BAVGPOST=0.992;BRSQ=0.976;LDAF=0.1725;AVGPOST=0.9974;RSQ=0.9927;ERATE=0.0004;THETA=0.0005;AC=378;AN=2184 GT:DS:GL:BD 0.17307693 0
1 233808101 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0359;AVGPOST=0.9993;RSQ=0.9916;ERATE=0.0003;THETA=0.0002;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 233808313 rs10532225 ATG A 12925 PASS INDEL;BAVGPOST=0.983;BRSQ=0.963;LDAF=0.3326;AVGPOST=0.9842;RSQ=0.9714;ERATE=0.0015;THETA=0.0004;AC=730;AN=2184 GT:DS:GL:BD 0.33424908 0
1 233808399 rs71755291 ACG A 6064 PASS INDEL;BAVGPOST=0.726;BRSQ=0.439;LDAF=0.3774;AVGPOST=0.7031;RSQ=0.4728;ERATE=0.0575;THETA=0.0002;AC=745;AN=2184 GT:DS:GL:BD 0.34111720 0
1 233808427 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0056;AVGPOST=0.9971;RSQ=0.7845;ERATE=0.0004;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 233808641 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.3212;AVGPOST=0.9884;RSQ=0.9799;ERATE=0.0026;THETA=0.0003;AC=699;AN=2184 GT:DS:GL:BD 0.32005495 0
1 233808650 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7251;ERATE=0.0004;THETA=0.0038;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233808651 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0026;AVGPOST=0.9979;RSQ=0.6980;ERATE=0.0006;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233808652 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8116;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233808744 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6061;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233808871 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.3481;AVGPOST=0.9960;RSQ=0.9941;ERATE=0.0003;THETA=0.0003;AC=760;AN=2184 GT:DS:GL:BD 0.34798536 0
1 233808887 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0176;AVGPOST=0.9993;RSQ=0.9825;ERATE=0.0003;THETA=0.0001;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 233808889 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.6513;AVGPOST=0.9958;RSQ=0.9927;ERATE=0.0008;THETA=0.0007;AC=1425;AN=2184 GT:DS:GL:BD 0.65247256 1
1 233808965 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0004;THETA=0.0040;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233809001 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.6665;AVGPOST=0.9942;RSQ=0.9896;ERATE=0.0030;THETA=0.0018;AC=1455;AN=2184 GT:DS:GL:BD 0.66620880 1
1 233809041 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233809105 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0015;AVGPOST=0.9993;RSQ=0.7872;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233809111 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.5150;AVGPOST=0.9944;RSQ=0.9905;ERATE=0.0022;THETA=0.0003;AC=1126;AN=2184 GT:DS:GL:BD 0.51556778 1
1 233809129 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233809285 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5797;ERATE=0.0004;THETA=0.0050;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233809299 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7530;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233809392 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0188;AVGPOST=0.9999;RSQ=0.9978;ERATE=0.0002;THETA=0.0002;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 233809513 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0112;AVGPOST=0.9996;RSQ=0.9856;ERATE=0.0003;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 233809528 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0110;AVGPOST=0.9999;RSQ=0.9944;ERATE=0.0002;THETA=0.0012;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 233809547 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0194;AVGPOST=0.9993;RSQ=0.9843;ERATE=0.0003;THETA=0.0005;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 233809566 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0111;AVGPOST=0.9997;RSQ=0.9891;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 233810061 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0524;AVGPOST=0.9992;RSQ=0.9934;ERATE=0.0004;THETA=0.0003;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 233810068 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0162;AVGPOST=0.9989;RSQ=0.9709;ERATE=0.0003;THETA=0.0001;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 233810079 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233810102 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6927;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233810151 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5991;ERATE=0.0002;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233810382 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.692;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6024;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233810411 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8825;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233810435 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0139;AVGPOST=0.9990;RSQ=0.9712;ERATE=0.0003;THETA=0.0002;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 233810519 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7495;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233810585 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.765;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233810600 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233810616 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0111;AVGPOST=0.9995;RSQ=0.9798;ERATE=0.0003;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 233810619 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0311;AVGPOST=0.9989;RSQ=0.9855;ERATE=0.0005;THETA=0.0004;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 233810833 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.610;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5545;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233810945 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0395;AVGPOST=0.9992;RSQ=0.9906;ERATE=0.0004;THETA=0.0003;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 233810972 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9341;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233810980 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0148;AVGPOST=0.9983;RSQ=0.9631;ERATE=0.0003;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 233811004 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0111;AVGPOST=0.9997;RSQ=0.9889;ERATE=0.0003;THETA=0.0001;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 233811099 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0097;AVGPOST=0.9999;RSQ=0.9931;ERATE=0.0003;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 233811112 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0137;AVGPOST=0.9992;RSQ=0.9762;ERATE=0.0003;THETA=0.0002;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 233811195 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0272;AVGPOST=0.9976;RSQ=0.9662;ERATE=0.0004;THETA=0.0002;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 233811263 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0018;AVGPOST=0.9978;RSQ=0.5700;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233811612 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0190;AVGPOST=0.9994;RSQ=0.9857;ERATE=0.0002;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 233811622 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.994;LDAF=0.3202;AVGPOST=0.9978;RSQ=0.9960;ERATE=0.0006;THETA=0.0003;AC=701;AN=2184 GT:DS:GL:BD 0.32097068 0
1 233811658 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0021;AVGPOST=0.9983;RSQ=0.7048;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233811694 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0368;AVGPOST=0.9991;RSQ=0.9908;ERATE=0.0003;THETA=0.0003;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 233811744 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2814;AVGPOST=0.9989;RSQ=0.9976;ERATE=0.0003;THETA=0.0005;AC=615;AN=2184 GT:DS:GL:BD 0.28159341 0
1 233811786 . GC G 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5682;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233811790 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0192;AVGPOST=0.9998;RSQ=0.9948;ERATE=0.0003;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 233811846 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233811860 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9359;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233811877 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7104;AVGPOST=0.9983;RSQ=0.9965;ERATE=0.0002;THETA=0.0008;AC=1551;AN=2184 GT:DS:GL:BD 0.71016484 1
1 233811896 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.2356;AVGPOST=0.9963;RSQ=0.9932;ERATE=0.0004;THETA=0.0003;AC=514;AN=2184 GT:DS:GL:BD 0.23534799 0
1 233812071 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0526;AVGPOST=0.9976;RSQ=0.9819;ERATE=0.0005;THETA=0.0003;AC=114;AN=2184 GT:DS:GL:BD 0.05219780 0
1 233812099 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.0400;AVGPOST=0.9995;RSQ=0.9952;ERATE=0.0003;THETA=0.0002;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 233812218 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8810;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233812227 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0031;AVGPOST=0.9987;RSQ=0.8468;ERATE=0.0002;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233812301 . AT A 436 PASS INDEL;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0086;AVGPOST=0.9956;RSQ=0.8055;ERATE=0.0005;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 233812545 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8141;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233812581 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.854;LDAF=0.0023;AVGPOST=0.9987;RSQ=0.7549;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233812613 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.0405;AVGPOST=0.9967;RSQ=0.9760;ERATE=0.0002;THETA=0.0003;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 233812713 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0041;AVGPOST=0.9994;RSQ=0.9423;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233812883 . TC T 1608 PASS INDEL;BAVGPOST=0.998;BRSQ=0.947;LDAF=0.0188;AVGPOST=0.9997;RSQ=0.9928;ERATE=0.0002;THETA=0.0002;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 233812886 . TA T 1591 PASS INDEL;BAVGPOST=0.998;BRSQ=0.947;LDAF=0.0189;AVGPOST=0.9996;RSQ=0.9917;ERATE=0.0002;THETA=0.0007;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 233812902 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1649;AVGPOST=0.9981;RSQ=0.9943;ERATE=0.0006;THETA=0.0003;AC=359;AN=2184 GT:DS:GL:BD 0.16437729 0
1 233813056 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.759;LDAF=0.0044;AVGPOST=0.9973;RSQ=0.7551;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233813072 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1646;AVGPOST=0.9994;RSQ=0.9981;ERATE=0.0003;THETA=0.0004;AC=359;AN=2184 GT:DS:GL:BD 0.16437729 0
1 233813082 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0169;AVGPOST=0.9987;RSQ=0.9697;ERATE=0.0004;THETA=0.0002;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 233813164 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0205;AVGPOST=0.9981;RSQ=0.9670;ERATE=0.0003;THETA=0.0026;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 233813258 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0057;AVGPOST=0.9994;RSQ=0.9572;ERATE=0.0002;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 233813318 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0796;AVGPOST=0.9998;RSQ=0.9989;ERATE=0.0003;THETA=0.0005;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 233813380 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5073;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233813503 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0097;AVGPOST=0.9999;RSQ=0.9931;ERATE=0.0003;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 233813639 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0030;AVGPOST=0.9978;RSQ=0.7303;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233813697 . A AT 110 PASS INDEL;BAVGPOST=1.000;BRSQ=0.720;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5335;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233813809 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0106;AVGPOST=0.9998;RSQ=0.9925;ERATE=0.0002;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 233813839 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.5032;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233813854 . TGG T 375 PASS INDEL;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0036;AVGPOST=0.9981;RSQ=0.8081;ERATE=0.0003;THETA=0.0001;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233813906 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0035;AVGPOST=0.9981;RSQ=0.8280;ERATE=0.0004;THETA=0.0001;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233813969 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9587;ERATE=0.0002;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 233814013 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0390;AVGPOST=0.9997;RSQ=0.9962;ERATE=0.0003;THETA=0.0001;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 233814014 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0079;AVGPOST=0.9995;RSQ=0.9734;ERATE=0.0003;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 233814124 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8857;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233814135 . AAG A 15 PASS INDEL;BAVGPOST=0.997;BRSQ=0.811;LDAF=0.0082;AVGPOST=0.9985;RSQ=0.9381;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 233814136 . AGAG A 1625 PASS INDEL;BAVGPOST=0.997;BRSQ=0.836;LDAF=0.0082;AVGPOST=0.9986;RSQ=0.9426;ERATE=0.0003;THETA=0.0001;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 233814141 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7199;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233814163 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0059;AVGPOST=0.9996;RSQ=0.9718;ERATE=0.0002;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 233814187 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233814221 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233814373 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.6163;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233814426 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.936;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233814656 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9994;RSQ=0.9507;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 233814663 . G GA 60 PASS INDEL;BAVGPOST=0.990;BRSQ=0.580;LDAF=0.0161;AVGPOST=0.9825;RSQ=0.5706;ERATE=0.0041;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 233814672 . AT A 1042 PASS INDEL;BAVGPOST=0.978;BRSQ=0.834;LDAF=0.0694;AVGPOST=0.9894;RSQ=0.9456;ERATE=0.0005;THETA=0.0003;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 233814673 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.0815;AVGPOST=0.9961;RSQ=0.9815;ERATE=0.0005;THETA=0.0004;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 233814712 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0378;AVGPOST=0.9991;RSQ=0.9898;ERATE=0.0003;THETA=0.0003;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 233814765 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0035;AVGPOST=0.9990;RSQ=0.8655;ERATE=0.0008;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233814771 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.0037;AVGPOST=0.9987;RSQ=0.8353;ERATE=0.0002;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233814782 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6259;ERATE=0.0003;THETA=0.0040;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233814839 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.811;LDAF=0.0054;AVGPOST=0.9979;RSQ=0.8484;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 233814843 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.849;LDAF=0.0168;AVGPOST=0.9963;RSQ=0.9163;ERATE=0.0004;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 233814929 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.967;LDAF=0.0262;AVGPOST=0.9994;RSQ=0.9899;ERATE=0.0003;THETA=0.0002;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 233814960 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8404;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233815034 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1757;AVGPOST=0.9961;RSQ=0.9895;ERATE=0.0005;THETA=0.0003;AC=382;AN=2184 GT:DS:GL:BD 0.17490843 0
1 233815176 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0193;AVGPOST=0.9997;RSQ=0.9939;ERATE=0.0003;THETA=0.0004;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 233815450 . G GT 86 PASS INDEL;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7323;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233815457 . AT A 205 PASS INDEL;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7576;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233815459 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0052;AVGPOST=0.9992;RSQ=0.9437;ERATE=0.0002;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 233815558 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0271;AVGPOST=0.9967;RSQ=0.9541;ERATE=0.0011;THETA=0.0002;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 233815604 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233815677 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1743;AVGPOST=0.9994;RSQ=0.9986;ERATE=0.0002;THETA=0.0003;AC=381;AN=2184 GT:DS:GL:BD 0.17445055 0
1 233815823 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6656;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233815830 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0201;AVGPOST=0.9989;RSQ=0.9804;ERATE=0.0002;THETA=0.0002;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 233815880 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9474;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233815886 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.2109;AVGPOST=0.9960;RSQ=0.9919;ERATE=0.0004;THETA=0.0004;AC=461;AN=2184 GT:DS:GL:BD 0.21108058 0
1 233815957 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0121;AVGPOST=0.9981;RSQ=0.9339;ERATE=0.0003;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 233816026 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2128;AVGPOST=0.9984;RSQ=0.9963;ERATE=0.0006;THETA=0.0001;AC=464;AN=2184 GT:DS:GL:BD 0.21245421 0
1 233816073 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.794;LDAF=0.0042;AVGPOST=0.9984;RSQ=0.8504;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233816075 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0283;AVGPOST=0.9991;RSQ=0.9876;ERATE=0.0002;THETA=0.0025;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 233816146 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.2144;AVGPOST=0.9980;RSQ=0.9957;ERATE=0.0006;THETA=0.0027;AC=468;AN=2184 GT:DS:GL:BD 0.21428572 0
1 233816174 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0101;AVGPOST=0.9990;RSQ=0.9649;ERATE=0.0002;THETA=0.0001;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 233816243 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8603;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233816334 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0494;AVGPOST=0.9998;RSQ=0.9980;ERATE=0.0002;THETA=0.0003;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 233816361 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1731;AVGPOST=0.9978;RSQ=0.9948;ERATE=0.0003;THETA=0.0003;AC=378;AN=2184 GT:DS:GL:BD 0.17307693 0
1 233816373 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.916;LDAF=0.0263;AVGPOST=0.9982;RSQ=0.9693;ERATE=0.0002;THETA=0.0002;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 233816379 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0007;AVGPOST=0.9988;RSQ=0.4105;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233816451 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.8180;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233816501 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.8294;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233816564 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0187;AVGPOST=0.9997;RSQ=0.9937;ERATE=0.0002;THETA=0.0002;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 233816647 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6334;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233816651 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0825;AVGPOST=0.9987;RSQ=0.9943;ERATE=0.0004;THETA=0.0003;AC=181;AN=2184 GT:DS:GL:BD 0.08287546 0
1 233816735 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0023;AVGPOST=0.9987;RSQ=0.8001;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233816810 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7185;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233816842 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0100;AVGPOST=0.9989;RSQ=0.9666;ERATE=0.0002;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 233817078 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0402;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 233817178 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0284;AVGPOST=0.9989;RSQ=0.9830;ERATE=0.0002;THETA=0.0004;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 233817186 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0769;AVGPOST=0.9998;RSQ=0.9985;ERATE=0.0002;THETA=0.0004;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 233817412 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.952;LDAF=0.0160;AVGPOST=0.9980;RSQ=0.9494;ERATE=0.0003;THETA=0.0020;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 233817455 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233817520 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.874;LDAF=0.0067;AVGPOST=0.9973;RSQ=0.8611;ERATE=0.0002;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 233817562 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.753;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5826;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233817704 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.741;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6662;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233817845 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0209;AVGPOST=0.9985;RSQ=0.9718;ERATE=0.0003;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 233817893 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0093;AVGPOST=0.9988;RSQ=0.9608;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 233817899 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0002;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233817903 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5914;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233817909 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0081;AVGPOST=0.9990;RSQ=0.9503;ERATE=0.0004;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 233817911 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.897;LDAF=0.0128;AVGPOST=0.9975;RSQ=0.9242;ERATE=0.0004;THETA=0.0001;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 233817941 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0279;AVGPOST=0.9999;RSQ=0.9977;ERATE=0.0003;THETA=0.0005;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 233817964 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5187;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233818076 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0015;AVGPOST=0.9985;RSQ=0.6011;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233818241 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0065;AVGPOST=0.9989;RSQ=0.9323;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 233818282 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5628;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233818349 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.1919;AVGPOST=0.9981;RSQ=0.9953;ERATE=0.0004;THETA=0.0005;AC=419;AN=2184 GT:DS:GL:BD 0.19184981 0
1 233818446 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0285;AVGPOST=0.9997;RSQ=0.9947;ERATE=0.0003;THETA=0.0005;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 233818447 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8514;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233818480 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6497;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233818514 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2604;AVGPOST=0.9976;RSQ=0.9947;ERATE=0.0004;THETA=0.0005;AC=568;AN=2184 GT:DS:GL:BD 0.26007327 0
1 233818526 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7052;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233818626 rs34626895 AG A 22069 PASS INDEL;BAVGPOST=0.992;BRSQ=0.979;LDAF=0.1707;AVGPOST=0.9971;RSQ=0.9926;ERATE=0.0007;THETA=0.0002;AC=373;AN=2184 GT:DS:GL:BD 0.17078754 0
1 233818660 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7944;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233818664 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0088;AVGPOST=0.9995;RSQ=0.9706;ERATE=0.0004;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 233818681 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.9030;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233818705 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3189;AVGPOST=0.9977;RSQ=0.9955;ERATE=0.0007;THETA=0.0005;AC=697;AN=2184 GT:DS:GL:BD 0.31913918 0
1 233818718 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6721;ERATE=0.0003;THETA=0.0044;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233818719 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4491;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233818759 . T TG 43 PASS INDEL;BAVGPOST=1.000;BRSQ=0.764;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5710;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233818898 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0281;AVGPOST=0.9995;RSQ=0.9917;ERATE=0.0003;THETA=0.0007;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 233818921 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0263;AVGPOST=0.9995;RSQ=0.9918;ERATE=0.0003;THETA=0.0002;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 233819177 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0262;AVGPOST=0.9997;RSQ=0.9947;ERATE=0.0003;THETA=0.0004;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 233819203 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0140;AVGPOST=0.9994;RSQ=0.9794;ERATE=0.0004;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 233819298 . GC G 139 PASS INDEL;BAVGPOST=0.998;BRSQ=0.661;LDAF=0.0056;AVGPOST=0.9942;RSQ=0.5887;ERATE=0.0004;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233819718 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.898;BRSQ=0.444;LDAF=0.0994;AVGPOST=0.9368;RSQ=0.7714;ERATE=0.0004;THETA=0.0004;AC=216;AN=2184 GT:DS:GL:BD 0.09890110 0
1 233819750 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.891;BRSQ=0.559;LDAF=0.1406;AVGPOST=0.9242;RSQ=0.7851;ERATE=0.0016;THETA=0.0003;AC=307;AN=2184 GT:DS:GL:BD 0.14056776 0
1 233819751 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.781;LDAF=0.0280;AVGPOST=0.9927;RSQ=0.9046;ERATE=0.0004;THETA=0.0002;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 233819823 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.820;LDAF=0.0171;AVGPOST=0.9976;RSQ=0.9427;ERATE=0.0004;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 233819834 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.944;LDAF=0.1506;AVGPOST=0.9777;RSQ=0.9306;ERATE=0.0015;THETA=0.0003;AC=332;AN=2184 GT:DS:GL:BD 0.15201466 0
1 233819861 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.6962;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233819883 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.515;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6355;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233820058 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.939;LDAF=0.2218;AVGPOST=0.9883;RSQ=0.9729;ERATE=0.0006;THETA=0.0002;AC=486;AN=2184 GT:DS:GL:BD 0.22252747 0
1 233820176 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0284;AVGPOST=0.9989;RSQ=0.9841;ERATE=0.0003;THETA=0.0003;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 233820288 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.676;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6250;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233820294 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.937;LDAF=0.0256;AVGPOST=0.9970;RSQ=0.9541;ERATE=0.0004;THETA=0.0004;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 233820345 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.1916;AVGPOST=0.9968;RSQ=0.9914;ERATE=0.0002;THETA=0.0039;AC=420;AN=2184 GT:DS:GL:BD 0.19230770 0
1 233820399 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.921;LDAF=0.1957;AVGPOST=0.9891;RSQ=0.9748;ERATE=0.0005;THETA=0.0006;AC=433;AN=2184 GT:DS:GL:BD 0.19826007 0
1 233820409 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.4726;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233820421 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.692;LDAF=0.0133;AVGPOST=0.9829;RSQ=0.5035;ERATE=0.0043;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 233820429 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.881;LDAF=0.0303;AVGPOST=0.9855;RSQ=0.8070;ERATE=0.0044;THETA=0.0005;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 233820458 . C CT 43 PASS INDEL;BAVGPOST=0.998;BRSQ=0.812;LDAF=0.0073;AVGPOST=0.9923;RSQ=0.5918;ERATE=0.0029;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233820482 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.827;LDAF=0.0410;AVGPOST=0.9768;RSQ=0.7853;ERATE=0.0053;THETA=0.0009;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 233820499 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.921;BRSQ=0.870;LDAF=0.5089;AVGPOST=0.8606;RSQ=0.8034;ERATE=0.0263;THETA=0.0006;AC=1162;AN=2184 GT:DS:GL:BD 0.53205127 1
1 233820503 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.908;BRSQ=0.484;LDAF=0.8371;AVGPOST=0.8005;RSQ=0.4204;ERATE=0.0428;THETA=0.0002;AC=1974;AN=2184 GT:DS:GL:BD 0.90384614 1
1 233820514 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.633;LDAF=0.0048;AVGPOST=0.9927;RSQ=0.4286;ERATE=0.0007;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233820522 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.959;BRSQ=0.553;LDAF=0.0618;AVGPOST=0.9383;RSQ=0.5983;ERATE=0.0048;THETA=0.0005;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 233820553 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.927;BRSQ=0.833;LDAF=0.2322;AVGPOST=0.9419;RSQ=0.8799;ERATE=0.0053;THETA=0.0005;AC=505;AN=2184 GT:DS:GL:BD 0.23122710 0
1 233820624 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0100;AVGPOST=0.9989;RSQ=0.9522;ERATE=0.0004;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 233820675 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.646;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6350;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233820677 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0288;AVGPOST=0.9984;RSQ=0.9780;ERATE=0.0004;THETA=0.0003;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 233820694 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.755;LDAF=0.0023;AVGPOST=0.9982;RSQ=0.7055;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233820720 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0029;AVGPOST=0.9968;RSQ=0.6251;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233820743 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.770;LDAF=0.0069;AVGPOST=0.9964;RSQ=0.8204;ERATE=0.0003;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 233820776 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.860;LDAF=0.0228;AVGPOST=0.9949;RSQ=0.9184;ERATE=0.0005;THETA=0.0004;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 233820792 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6392;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233820801 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4961;ERATE=0.0004;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233820898 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.968;LDAF=0.1152;AVGPOST=0.9967;RSQ=0.9868;ERATE=0.0004;THETA=0.0004;AC=252;AN=2184 GT:DS:GL:BD 0.11538462 0
1 233820913 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0020;AVGPOST=0.9983;RSQ=0.6474;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233820922 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.958;LDAF=0.1898;AVGPOST=0.9763;RSQ=0.9468;ERATE=0.0030;THETA=0.0004;AC=416;AN=2184 GT:DS:GL:BD 0.19047619 0
1 233820972 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0116;AVGPOST=0.9970;RSQ=0.8862;ERATE=0.0006;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 233820993 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.937;LDAF=0.0281;AVGPOST=0.9959;RSQ=0.9494;ERATE=0.0005;THETA=0.0004;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 233821129 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0410;AVGPOST=0.9992;RSQ=0.9915;ERATE=0.0005;THETA=0.0003;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 233821130 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8721;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233821149 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.965;LDAF=0.0224;AVGPOST=0.9948;RSQ=0.9101;ERATE=0.0006;THETA=0.0004;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 233821222 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7762;ERATE=0.0003;THETA=0.0027;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233821279 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.814;BRSQ=0.675;LDAF=0.4066;AVGPOST=0.8019;RSQ=0.6800;ERATE=0.0511;THETA=0.0003;AC=896;AN=2184 GT:DS:GL:BD 0.41025642 0
1 233821298 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0061;AVGPOST=0.9959;RSQ=0.7170;ERATE=0.0008;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 233821366 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.7469;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233821578 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.760;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5407;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233821580 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.697;LDAF=0.0054;AVGPOST=0.9946;RSQ=0.6789;ERATE=0.0005;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233821581 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0088;AVGPOST=0.9991;RSQ=0.9538;ERATE=0.0004;THETA=0.0017;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 233821611 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.881;LDAF=0.0418;AVGPOST=0.9908;RSQ=0.9144;ERATE=0.0027;THETA=0.0005;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 233821669 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0092;AVGPOST=0.9982;RSQ=0.9199;ERATE=0.0003;THETA=0.0011;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 233821686 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.920;BRSQ=0.808;LDAF=0.2989;AVGPOST=0.8889;RSQ=0.7826;ERATE=0.0215;THETA=0.0014;AC=620;AN=2184 GT:DS:GL:BD 0.28388280 0
1 233821694 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.656;LDAF=0.0548;AVGPOST=0.9503;RSQ=0.6348;ERATE=0.0078;THETA=0.0002;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 233821722 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.864;BRSQ=0.717;LDAF=0.3808;AVGPOST=0.8223;RSQ=0.6701;ERATE=0.0535;THETA=0.0026;AC=808;AN=2184 GT:DS:GL:BD 0.36996338 0
1 233822050 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.936;BRSQ=0.863;LDAF=0.3028;AVGPOST=0.9004;RSQ=0.8287;ERATE=0.0116;THETA=0.0005;AC=643;AN=2184 GT:DS:GL:BD 0.29441392 0
1 233822258 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.570;LDAF=0.0144;AVGPOST=0.9872;RSQ=0.6970;ERATE=0.0005;THETA=0.0006;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 233822259 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.772;LDAF=0.0400;AVGPOST=0.9796;RSQ=0.8094;ERATE=0.0006;THETA=0.0006;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 233822266 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.545;LDAF=0.0129;AVGPOST=0.9883;RSQ=0.6863;ERATE=0.0005;THETA=0.0007;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 233822268 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.545;LDAF=0.0144;AVGPOST=0.9873;RSQ=0.6900;ERATE=0.0007;THETA=0.0013;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 233822328 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.703;LDAF=0.0572;AVGPOST=0.9807;RSQ=0.8696;ERATE=0.0005;THETA=0.0003;AC=123;AN=2184 GT:DS:GL:BD 0.05631868 0
1 233822349 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0288;AVGPOST=0.9976;RSQ=0.9672;ERATE=0.0004;THETA=0.0040;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 233822359 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4099;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233822423 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.650;LDAF=0.0096;AVGPOST=0.9929;RSQ=0.7033;ERATE=0.0004;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 233822424 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0023;AVGPOST=0.9992;RSQ=0.8591;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233822431 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4614;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233822497 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.967;LDAF=0.3144;AVGPOST=0.9348;RSQ=0.8867;ERATE=0.0071;THETA=0.0005;AC=669;AN=2184 GT:DS:GL:BD 0.30631867 0
1 233822500 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0029;AVGPOST=0.9970;RSQ=0.5218;ERATE=0.0008;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233822566 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0044;AVGPOST=0.9989;RSQ=0.8988;ERATE=0.0004;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 233822576 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0090;AVGPOST=0.9974;RSQ=0.8856;ERATE=0.0005;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 233822654 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0031;AVGPOST=0.9979;RSQ=0.7240;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233822698 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.781;LDAF=0.0055;AVGPOST=0.9968;RSQ=0.7556;ERATE=0.0006;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233822751 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0041;AVGPOST=0.9949;RSQ=0.4695;ERATE=0.0007;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233822796 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0215;AVGPOST=0.9951;RSQ=0.9108;ERATE=0.0005;THETA=0.0004;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 233822939 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.890;LDAF=0.0053;AVGPOST=0.9955;RSQ=0.6524;ERATE=0.0010;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233822960 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.963;BRSQ=0.898;LDAF=0.1934;AVGPOST=0.9895;RSQ=0.9757;ERATE=0.0006;THETA=0.0007;AC=420;AN=2184 GT:DS:GL:BD 0.19230770 0
1 233823101 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.960;BRSQ=0.898;LDAF=0.1964;AVGPOST=0.9235;RSQ=0.8256;ERATE=0.0100;THETA=0.0006;AC=383;AN=2184 GT:DS:GL:BD 0.17536630 0
1 233823122 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0263;AVGPOST=0.9992;RSQ=0.9871;ERATE=0.0004;THETA=0.0007;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 233823191 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.584;LDAF=0.0040;AVGPOST=0.9972;RSQ=0.6936;ERATE=0.0005;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233823223 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.720;LDAF=0.0034;AVGPOST=0.9963;RSQ=0.5545;ERATE=0.0006;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233823224 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.977;LDAF=0.0159;AVGPOST=0.9985;RSQ=0.9630;ERATE=0.0004;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 233823233 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.791;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7330;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233823325 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0273;AVGPOST=0.9972;RSQ=0.9604;ERATE=0.0007;THETA=0.0004;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 233823423 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.976;LDAF=0.0362;AVGPOST=0.9972;RSQ=0.9644;ERATE=0.0005;THETA=0.0006;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 233823442 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.745;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4780;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233823464 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7892;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233823693 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.988;LDAF=0.2222;AVGPOST=0.9824;RSQ=0.9637;ERATE=0.0005;THETA=0.0007;AC=475;AN=2184 GT:DS:GL:BD 0.21749084 0
1 233823757 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.729;LDAF=0.0030;AVGPOST=0.9972;RSQ=0.6776;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233823758 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.4392;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233823799 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233823851 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.976;LDAF=0.1681;AVGPOST=0.9948;RSQ=0.9880;ERATE=0.0003;THETA=0.0006;AC=365;AN=2184 GT:DS:GL:BD 0.16712454 0
1 233823857 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5490;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233823925 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.5681;AVGPOST=0.9947;RSQ=0.9922;ERATE=0.0007;THETA=0.0004;AC=1241;AN=2184 GT:DS:GL:BD 0.56822342 1
1 233823956 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4697;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233823975 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0101;AVGPOST=0.9988;RSQ=0.9457;ERATE=0.0004;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 233824016 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6772;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233824077 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.685;LDAF=0.0038;AVGPOST=0.9961;RSQ=0.5802;ERATE=0.0008;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233824078 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.1072;AVGPOST=0.9931;RSQ=0.9721;ERATE=0.0010;THETA=0.0005;AC=232;AN=2184 GT:DS:GL:BD 0.10622711 0
1 233824164 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.398;LDAF=0.0128;AVGPOST=0.9828;RSQ=0.4408;ERATE=0.0036;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 233824190 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0114;AVGPOST=0.9936;RSQ=0.7785;ERATE=0.0005;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 233824193 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0098;AVGPOST=0.9996;RSQ=0.9819;ERATE=0.0004;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 233824237 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.662;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9266;ERATE=0.0002;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233824289 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.455;LDAF=0.0220;AVGPOST=0.9686;RSQ=0.4190;ERATE=0.0039;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 233824387 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.850;LDAF=0.0051;AVGPOST=0.9966;RSQ=0.7502;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233824442 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.913;LDAF=0.0125;AVGPOST=0.9977;RSQ=0.9267;ERATE=0.0004;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 233824507 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5467;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233824526 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0022;AVGPOST=0.9973;RSQ=0.5798;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233824535 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.583;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.6075;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233824550 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233824631 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.985;LDAF=0.3118;AVGPOST=0.9855;RSQ=0.9737;ERATE=0.0011;THETA=0.0003;AC=680;AN=2184 GT:DS:GL:BD 0.31135532 0
1 233824646 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0277;AVGPOST=0.9968;RSQ=0.9558;ERATE=0.0006;THETA=0.0005;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 233824737 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.971;LDAF=0.5609;AVGPOST=0.9746;RSQ=0.9639;ERATE=0.0034;THETA=0.0002;AC=1235;AN=2184 GT:DS:GL:BD 0.56547618 1
1 233824753 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.346;LDAF=0.0086;AVGPOST=0.9884;RSQ=0.4989;ERATE=0.0039;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233824920 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.807;LDAF=0.0060;AVGPOST=0.9987;RSQ=0.9150;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 233824942 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0263;AVGPOST=0.9995;RSQ=0.9918;ERATE=0.0004;THETA=0.0004;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 233825071 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0046;AVGPOST=0.9994;RSQ=0.9406;ERATE=0.0004;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 233825128 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.970;LDAF=0.0548;AVGPOST=0.9968;RSQ=0.9744;ERATE=0.0003;THETA=0.0005;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 233825155 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.780;LDAF=0.0030;AVGPOST=0.9979;RSQ=0.6985;ERATE=0.0008;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233825168 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5992;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233825185 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6710;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233825199 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6708;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233825251 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6656;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233825294 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9167;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233825396 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5687;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233825409 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233825412 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233825445 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4893;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233825520 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8585;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233825752 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9469;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233825806 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233825853 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6057;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233826100 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.873;LDAF=0.0082;AVGPOST=0.9981;RSQ=0.9088;ERATE=0.0004;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 233826355 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6620;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233826575 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.822;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.8229;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233826636 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0012;AVGPOST=0.9996;RSQ=0.9075;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233826679 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.932;LDAF=0.0289;AVGPOST=0.9981;RSQ=0.9749;ERATE=0.0003;THETA=0.0001;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 233826680 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0275;AVGPOST=0.9999;RSQ=0.9978;ERATE=0.0002;THETA=0.0004;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 233826736 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0068;AVGPOST=0.9986;RSQ=0.9223;ERATE=0.0003;THETA=0.0013;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 233826738 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8782;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233826815 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.696;LDAF=0.0025;AVGPOST=0.9979;RSQ=0.6464;ERATE=0.0007;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233826989 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.860;LDAF=0.0021;AVGPOST=0.9989;RSQ=0.8101;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233827013 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2160;AVGPOST=0.9977;RSQ=0.9944;ERATE=0.0003;THETA=0.0006;AC=473;AN=2184 GT:DS:GL:BD 0.21657509 0
1 233827040 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233827100 . CCTGT C 390 PASS INDEL;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233827214 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0044;AVGPOST=0.9989;RSQ=0.8986;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233827264 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0277;AVGPOST=0.9991;RSQ=0.9854;ERATE=0.0004;THETA=0.0010;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 233827341 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233827466 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.860;LDAF=0.0056;AVGPOST=0.9995;RSQ=0.9590;ERATE=0.0002;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 233827555 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5857;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233827562 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9871;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 233827715 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0263;AVGPOST=0.9994;RSQ=0.9902;ERATE=0.0003;THETA=0.0007;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 233827775 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.686;LDAF=0.0013;AVGPOST=0.9980;RSQ=0.3794;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233827783 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4936;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233827874 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.987;LDAF=0.2023;AVGPOST=0.9931;RSQ=0.9834;ERATE=0.0008;THETA=0.0004;AC=444;AN=2184 GT:DS:GL:BD 0.20329671 0
1 233827919 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.560;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6719;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233827929 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7880;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233827978 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0096;AVGPOST=0.9999;RSQ=0.9954;ERATE=0.0002;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 233828062 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.692;LDAF=0.0020;AVGPOST=0.9972;RSQ=0.4658;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233828208 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0092;AVGPOST=0.9997;RSQ=0.9856;ERATE=0.0002;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 233828235 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8664;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233828343 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0043;AVGPOST=0.9988;RSQ=0.8970;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 233828349 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.980;LDAF=0.0367;AVGPOST=0.9986;RSQ=0.9865;ERATE=0.0007;THETA=0.0005;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 233828426 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9335;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233828427 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233828451 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233828463 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.889;LDAF=0.0114;AVGPOST=0.9963;RSQ=0.8782;ERATE=0.0002;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 233828588 . G GA 28 PASS INDEL;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8057;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233828692 . TG T 2942 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0259;AVGPOST=0.9993;RSQ=0.9913;ERATE=0.0003;THETA=0.0005;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 233828716 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0033;AVGPOST=0.9980;RSQ=0.7491;ERATE=0.0005;THETA=0.0016;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233828779 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0065;AVGPOST=0.9986;RSQ=0.9081;ERATE=0.0004;THETA=0.0011;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 233828781 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0099;AVGPOST=0.9989;RSQ=0.9537;ERATE=0.0002;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 233828825 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.542;LDAF=0.0028;AVGPOST=0.9973;RSQ=0.6399;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233828948 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.981;LDAF=0.1716;AVGPOST=0.9956;RSQ=0.9876;ERATE=0.0006;THETA=0.0009;AC=374;AN=2184 GT:DS:GL:BD 0.17124543 0
1 233829027 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0063;AVGPOST=0.9985;RSQ=0.9271;ERATE=0.0002;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 233829029 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7407;ERATE=0.0002;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233829061 . C CATAGAG 137 PASS INDEL;BAVGPOST=0.999;BRSQ=0.521;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.7530;ERATE=0.0003;THETA=0.0029;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233829063 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.7242;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233829145 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.808;LDAF=0.0118;AVGPOST=0.9965;RSQ=0.8841;ERATE=0.0002;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 233829231 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233829292 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233829305 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8608;ERATE=0.0003;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233829311 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.816;LDAF=0.0029;AVGPOST=0.9981;RSQ=0.7309;ERATE=0.0008;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233829344 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8908;ERATE=0.0005;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233829443 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0272;AVGPOST=0.9976;RSQ=0.9690;ERATE=0.0004;THETA=0.0004;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 233829474 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.800;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4017;ERATE=0.0006;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233829475 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4834;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233829639 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0049;AVGPOST=0.9985;RSQ=0.8974;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 233829696 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.782;LDAF=0.0072;AVGPOST=0.9953;RSQ=0.7620;ERATE=0.0005;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 233829832 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.762;LDAF=0.0013;AVGPOST=0.9994;RSQ=0.8056;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233829874 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0261;AVGPOST=0.9998;RSQ=0.9969;ERATE=0.0002;THETA=0.0009;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 233830033 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0053;AVGPOST=0.9993;RSQ=0.9538;ERATE=0.0002;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 233830073 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6760;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233830260 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8756;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233830396 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.8026;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233830577 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0261;AVGPOST=0.9997;RSQ=0.9947;ERATE=0.0003;THETA=0.0013;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 233830686 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0261;AVGPOST=0.9999;RSQ=0.9977;ERATE=0.0002;THETA=0.0007;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 233830739 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0025;AVGPOST=0.9975;RSQ=0.6206;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233830740 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.687;LDAF=0.0020;AVGPOST=0.9984;RSQ=0.6954;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233830829 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.6393;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233830901 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6019;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233830935 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4892;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233831044 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5638;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233831068 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233831418 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0096;AVGPOST=0.9993;RSQ=0.9690;ERATE=0.0002;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 233831572 . CAT C 55 PASS INDEL;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7255;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233831582 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7334;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233831599 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8005;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233831821 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0034;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233831975 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7995;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233832190 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4966;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233832263 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6300;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233832437 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233832459 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0261;AVGPOST=0.9998;RSQ=0.9969;ERATE=0.0003;THETA=0.0009;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 233832570 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.7493;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233832727 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.775;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6180;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233832828 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0261;AVGPOST=0.9998;RSQ=0.9969;ERATE=0.0003;THETA=0.0002;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 233832933 . A AC 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233832988 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.803;LDAF=0.0042;AVGPOST=0.9976;RSQ=0.7931;ERATE=0.0004;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233833003 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0040;AVGPOST=0.9987;RSQ=0.8818;ERATE=0.0004;THETA=0.0012;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233833134 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.967;LDAF=0.0264;AVGPOST=0.9990;RSQ=0.9851;ERATE=0.0003;THETA=0.0009;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 233833185 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7605;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233833188 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0261;AVGPOST=0.9996;RSQ=0.9931;ERATE=0.0004;THETA=0.0019;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 233833218 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5957;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233833477 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8382;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233833558 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.986;LDAF=0.5670;AVGPOST=0.9872;RSQ=0.9792;ERATE=0.0009;THETA=0.0009;AC=1237;AN=2184 GT:DS:GL:BD 0.56639194 1
1 233833747 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.937;LDAF=0.9617;AVGPOST=0.9959;RSQ=0.9589;ERATE=0.0005;THETA=0.0004;AC=2101;AN=2184 GT:DS:GL:BD 0.96199632 1
1 233833818 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0001;AVGPOST=0.9998;RSQ=0.0498;ERATE=0.0003;THETA=0.0008;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 233833838 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0022;AVGPOST=0.9989;RSQ=0.8038;ERATE=0.0003;THETA=0.0050;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233833854 rs35562918 AAAC A 2206 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0181;AVGPOST=0.9938;RSQ=0.8734;ERATE=0.0004;THETA=0.0005;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 233834050 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9989;RSQ=0.9043;ERATE=0.0003;THETA=0.0010;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 233834159 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.714;LDAF=0.0049;AVGPOST=0.9947;RSQ=0.5871;ERATE=0.0018;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233834282 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.729;LDAF=0.0023;AVGPOST=0.9987;RSQ=0.7986;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233834312 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.994;LDAF=0.2824;AVGPOST=0.9899;RSQ=0.9824;ERATE=0.0003;THETA=0.0008;AC=616;AN=2184 GT:DS:GL:BD 0.28205130 0
1 233834430 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1115;AVGPOST=0.9962;RSQ=0.9856;ERATE=0.0002;THETA=0.0123;AC=243;AN=2184 GT:DS:GL:BD 0.11126374 0
1 233834456 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.954;LDAF=0.0211;AVGPOST=0.9963;RSQ=0.9369;ERATE=0.0003;THETA=0.0005;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 233834477 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233834572 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0161;AVGPOST=0.9989;RSQ=0.9693;ERATE=0.0003;THETA=0.0008;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 233834705 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7644;ERATE=0.0005;THETA=0.0088;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233834759 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.754;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7011;ERATE=0.0010;THETA=0.0083;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233834806 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0257;AVGPOST=0.9993;RSQ=0.9881;ERATE=0.0003;THETA=0.0122;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 233835072 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6323;ERATE=0.0003;THETA=0.0072;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233835278 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.797;LDAF=0.0088;AVGPOST=0.9947;RSQ=0.7618;ERATE=0.0006;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 233835279 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.706;LDAF=0.0037;AVGPOST=0.9963;RSQ=0.5939;ERATE=0.0006;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233835412 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.925;BRSQ=0.795;LDAF=0.2141;AVGPOST=0.9312;RSQ=0.8456;ERATE=0.0041;THETA=0.0075;AC=452;AN=2184 GT:DS:GL:BD 0.20695971 0
1 233835527 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.875;LDAF=0.0072;AVGPOST=0.9956;RSQ=0.7820;ERATE=0.0004;THETA=0.0036;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 233835614 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.767;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8292;ERATE=0.0005;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233835783 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7133;ERATE=0.0008;THETA=0.0024;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233835902 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0027;AVGPOST=0.9981;RSQ=0.7478;ERATE=0.0002;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233836002 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8497;ERATE=0.0002;THETA=0.0064;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233836043 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9385;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233836068 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.902;LDAF=0.0049;AVGPOST=0.9987;RSQ=0.8882;ERATE=0.0002;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 233836435 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6545;ERATE=0.0002;THETA=0.0037;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233836466 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7085;ERATE=0.0005;THETA=0.0126;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233836571 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0002;THETA=0.0063;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233836578 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9594;ERATE=0.0002;THETA=0.0018;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233836581 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.9110;ERATE=0.0002;THETA=0.0180;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233836645 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8517;ERATE=0.0003;THETA=0.0061;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233836657 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7200;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233836746 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5861;ERATE=0.0002;THETA=0.0094;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233836906 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0031;AVGPOST=0.9988;RSQ=0.8275;ERATE=0.0005;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233836913 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233836997 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0052;AVGPOST=0.9996;RSQ=0.9627;ERATE=0.0003;THETA=0.0125;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 233837069 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.4915;AVGPOST=0.9903;RSQ=0.9860;ERATE=0.0008;THETA=0.0007;AC=1073;AN=2184 GT:DS:GL:BD 0.49130037 0
1 233837071 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0030;AVGPOST=0.9985;RSQ=0.8076;ERATE=0.0003;THETA=0.0029;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233837370 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5302;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233837459 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8675;ERATE=0.0002;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233837477 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0023;AVGPOST=0.9982;RSQ=0.7634;ERATE=0.0002;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233837482 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0001;AVGPOST=0.9997;RSQ=0.0497;ERATE=0.0003;THETA=0.0008;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 233837512 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0207;AVGPOST=0.9996;RSQ=0.9915;ERATE=0.0003;THETA=0.0005;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 233837693 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0002;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233837713 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.657;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6151;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233837898 rs5781755 T TA 25192 PASS INDEL;BAVGPOST=0.936;BRSQ=0.875;LDAF=0.5658;AVGPOST=0.8471;RSQ=0.7581;ERATE=0.0475;THETA=0.0005;AC=1267;AN=2184 GT:DS:GL:BD 0.58012819 1
1 233837932 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.920;LDAF=0.0520;AVGPOST=0.9939;RSQ=0.9499;ERATE=0.0007;THETA=0.0005;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 233838192 . A ATC 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.711;LDAF=0.0024;AVGPOST=0.9975;RSQ=0.6075;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233838477 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0195;AVGPOST=0.9994;RSQ=0.9845;ERATE=0.0004;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 233838486 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0186;AVGPOST=0.9992;RSQ=0.9795;ERATE=0.0004;THETA=0.0026;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 233838556 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0047;AVGPOST=0.9991;RSQ=0.9268;ERATE=0.0002;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 233838562 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8495;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233838593 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0207;AVGPOST=0.9995;RSQ=0.9897;ERATE=0.0003;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 233838645 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0105;AVGPOST=0.9976;RSQ=0.9070;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 233838710 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.726;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5746;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233839082 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5192;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233839146 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5421;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233839153 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233839254 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.748;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7810;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233839255 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2704;AVGPOST=0.9976;RSQ=0.9952;ERATE=0.0003;THETA=0.0005;AC=590;AN=2184 GT:DS:GL:BD 0.27014652 0
1 233839272 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5733;AVGPOST=0.9925;RSQ=0.9884;ERATE=0.0009;THETA=0.0005;AC=1250;AN=2184 GT:DS:GL:BD 0.57234430 1
1 233839316 rs34622933 AG A 13231 PASS INDEL;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1513;AVGPOST=0.9943;RSQ=0.9816;ERATE=0.0004;THETA=0.0005;AC=329;AN=2184 GT:DS:GL:BD 0.15064102 0
1 233839338 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233839351 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.774;LDAF=0.0024;AVGPOST=0.9992;RSQ=0.8540;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233839464 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0210;AVGPOST=0.9991;RSQ=0.9843;ERATE=0.0002;THETA=0.0005;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 233839508 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0133;AVGPOST=0.9995;RSQ=0.9847;ERATE=0.0003;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 233839528 . TA T 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5706;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233839620 . TAAC T 641 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0074;AVGPOST=0.9982;RSQ=0.9144;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 233839628 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0055;AVGPOST=0.9990;RSQ=0.9513;ERATE=0.0002;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 233839646 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.764;LDAF=0.0026;AVGPOST=0.9987;RSQ=0.7955;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233839681 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0022;AVGPOST=0.9994;RSQ=0.8996;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233839689 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3176;AVGPOST=0.9978;RSQ=0.9956;ERATE=0.0005;THETA=0.0004;AC=692;AN=2184 GT:DS:GL:BD 0.31684983 0
1 233839731 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0094;AVGPOST=0.9969;RSQ=0.8689;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 233839758 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0204;AVGPOST=0.9992;RSQ=0.9880;ERATE=0.0002;THETA=0.0029;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 233839832 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0071;AVGPOST=0.9995;RSQ=0.9641;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 233839897 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8622;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233840038 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233840051 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233840087 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7247;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233840224 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.9748;AVGPOST=0.9993;RSQ=0.9870;ERATE=0.0004;THETA=0.0003;AC=2129;AN=2184 GT:DS:GL:BD 0.97481686 1
1 233840233 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233840241 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.7066;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233840249 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0165;AVGPOST=0.9998;RSQ=0.9949;ERATE=0.0003;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 233840397 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8432;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233840402 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0193;AVGPOST=0.9982;RSQ=0.9614;ERATE=0.0004;THETA=0.0003;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 233840581 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0029;AVGPOST=0.9987;RSQ=0.8047;ERATE=0.0004;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233840671 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6274;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233840675 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0018;AVGPOST=0.9985;RSQ=0.6892;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233840685 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7033;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233840722 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4856;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233840751 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.792;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7478;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233840757 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0018;AVGPOST=0.9979;RSQ=0.5458;ERATE=0.0003;THETA=0.0032;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233840898 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8318;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233840927 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3020;AVGPOST=0.9982;RSQ=0.9963;ERATE=0.0004;THETA=0.0003;AC=658;AN=2184 GT:DS:GL:BD 0.30128205 0
1 233840977 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9321;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233841008 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5907;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233841135 . CAT C 207 PASS INDEL;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.3848;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233841244 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6580;ERATE=0.0002;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233841276 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0053;AVGPOST=0.9994;RSQ=0.9621;ERATE=0.0002;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 233841382 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.0024;AVGPOST=0.9991;RSQ=0.8739;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233841521 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233841552 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9020;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233841625 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.784;LDAF=0.0032;AVGPOST=0.9981;RSQ=0.7869;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233841765 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.991;LDAF=0.1971;AVGPOST=0.9911;RSQ=0.9801;ERATE=0.0003;THETA=0.0004;AC=429;AN=2184 GT:DS:GL:BD 0.19642857 0
1 233841766 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9253;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233841797 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8625;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233841809 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0050;AVGPOST=0.9992;RSQ=0.9403;ERATE=0.0002;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 233841867 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.896;LDAF=0.0084;AVGPOST=0.9987;RSQ=0.9367;ERATE=0.0002;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 233841942 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0185;AVGPOST=0.9996;RSQ=0.9907;ERATE=0.0003;THETA=0.0002;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 233842012 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.9559;AVGPOST=0.9995;RSQ=0.9951;ERATE=0.0003;THETA=0.0004;AC=2088;AN=2184 GT:DS:GL:BD 0.95604396 1
1 233842014 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0025;AVGPOST=0.9978;RSQ=0.6731;ERATE=0.0002;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233842024 . CA C 67 PASS INDEL;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0021;AVGPOST=0.9980;RSQ=0.6367;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233842053 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.6180;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233842097 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0168;AVGPOST=0.9993;RSQ=0.9816;ERATE=0.0003;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 233842170 . TCTC T 583 PASS INDEL;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0055;AVGPOST=0.9987;RSQ=0.9012;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 233842245 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0183;AVGPOST=0.9999;RSQ=0.9977;ERATE=0.0002;THETA=0.0002;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 233842247 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0691;AVGPOST=0.9989;RSQ=0.9942;ERATE=0.0003;THETA=0.0004;AC=151;AN=2184 GT:DS:GL:BD 0.06913920 0
1 233842315 . CA C 77 PASS INDEL;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5372;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233842411 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0165;AVGPOST=0.9996;RSQ=0.9898;ERATE=0.0002;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 233842488 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9539;AVGPOST=0.9994;RSQ=0.9955;ERATE=0.0002;THETA=0.0007;AC=2083;AN=2184 GT:DS:GL:BD 0.95375460 1
1 233842572 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7627;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233842629 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5871;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233842725 . TCA T 53 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5306;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233842840 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7673;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233842880 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0004;AVGPOST=0.9996;RSQ=0.6330;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233842900 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3926;AVGPOST=0.9983;RSQ=0.9971;ERATE=0.0004;THETA=0.0004;AC=858;AN=2184 GT:DS:GL:BD 0.39285713 0
1 233842907 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1686;AVGPOST=0.9979;RSQ=0.9940;ERATE=0.0004;THETA=0.0004;AC=369;AN=2184 GT:DS:GL:BD 0.16895604 0
1 233842932 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0366;AVGPOST=0.9994;RSQ=0.9930;ERATE=0.0003;THETA=0.0004;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 233842940 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.1635;AVGPOST=0.9972;RSQ=0.9922;ERATE=0.0004;THETA=0.0022;AC=356;AN=2184 GT:DS:GL:BD 0.16300367 0
1 233843125 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5750;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233843156 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7607;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233843197 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2829;AVGPOST=0.9989;RSQ=0.9978;ERATE=0.0003;THETA=0.0004;AC=617;AN=2184 GT:DS:GL:BD 0.28250915 0
1 233843214 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8477;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233843227 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5654;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233843246 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0021;AVGPOST=0.9987;RSQ=0.7273;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233843258 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7577;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233843262 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3942;AVGPOST=0.9980;RSQ=0.9969;ERATE=0.0004;THETA=0.0003;AC=862;AN=2184 GT:DS:GL:BD 0.39468864 0
1 233843328 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.8052;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233843329 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.951;LDAF=0.0182;AVGPOST=0.9973;RSQ=0.9493;ERATE=0.0003;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 233843423 . TG T 35 PASS INDEL;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4053;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233843560 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0184;AVGPOST=0.9999;RSQ=0.9967;ERATE=0.0003;THETA=0.0003;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 233843653 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5655;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233843668 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0004;AVGPOST=0.9997;RSQ=0.6879;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233843718 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7941;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233843795 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3035;AVGPOST=0.9990;RSQ=0.9980;ERATE=0.0003;THETA=0.0003;AC=662;AN=2184 GT:DS:GL:BD 0.30311355 0
1 233843958 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233844088 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9863;ERATE=0.0002;THETA=0.0011;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 233844144 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0038;AVGPOST=0.9986;RSQ=0.8381;ERATE=0.0004;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233844155 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4828;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233844174 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233844209 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8789;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233844378 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.9742;AVGPOST=0.9997;RSQ=0.9940;ERATE=0.0003;THETA=0.0005;AC=2128;AN=2184 GT:DS:GL:BD 0.97435898 1
1 233844470 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.6038;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233844520 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.975;LDAF=0.0196;AVGPOST=0.9957;RSQ=0.9220;ERATE=0.0004;THETA=0.0002;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 233844603 rs71641288 AAG A 34954 PASS INDEL;BAVGPOST=0.992;BRSQ=0.985;LDAF=0.4027;AVGPOST=0.9734;RSQ=0.9598;ERATE=0.0074;THETA=0.0003;AC=872;AN=2184 GT:DS:GL:BD 0.39926741 0
1 233844627 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0096;AVGPOST=0.9990;RSQ=0.9626;ERATE=0.0002;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 233844669 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8968;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233844738 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8622;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233844750 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0175;AVGPOST=0.9998;RSQ=0.9955;ERATE=0.0003;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 233844902 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8154;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233844904 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9810;ERATE=0.0002;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 233844910 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6762;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233844992 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.9733;AVGPOST=0.9993;RSQ=0.9873;ERATE=0.0003;THETA=0.0004;AC=2126;AN=2184 GT:DS:GL:BD 0.97344321 1
1 233845061 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3930;AVGPOST=0.9962;RSQ=0.9936;ERATE=0.0008;THETA=0.0003;AC=858;AN=2184 GT:DS:GL:BD 0.39285713 0
1 233845066 . GA G 111 PASS INDEL;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0019;AVGPOST=0.9986;RSQ=0.7038;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233845139 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0119;AVGPOST=0.9977;RSQ=0.9184;ERATE=0.0006;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 233845187 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7304;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233845219 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9233;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233845311 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.675;LDAF=0.0034;AVGPOST=0.9957;RSQ=0.4881;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233845352 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.685;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4279;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233845361 . ATATG A 46 PASS INDEL;BAVGPOST=0.999;BRSQ=0.593;LDAF=0.0018;AVGPOST=0.9974;RSQ=0.4259;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233845414 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.612;LDAF=0.0134;AVGPOST=0.9898;RSQ=0.7203;ERATE=0.0016;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 233845685 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.9739;AVGPOST=0.9989;RSQ=0.9804;ERATE=0.0004;THETA=0.0025;AC=2128;AN=2184 GT:DS:GL:BD 0.97435898 1
1 233845747 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0034;AVGPOST=0.9991;RSQ=0.8819;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233845775 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.935;LDAF=0.8634;AVGPOST=0.9660;RSQ=0.8934;ERATE=0.0081;THETA=0.0005;AC=1904;AN=2184 GT:DS:GL:BD 0.87179488 1
1 233845858 . GT G 52 PASS INDEL;BAVGPOST=0.999;BRSQ=0.634;LDAF=0.0020;AVGPOST=0.9984;RSQ=0.6734;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233845908 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0099;AVGPOST=0.9990;RSQ=0.9685;ERATE=0.0003;THETA=0.0015;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 233845923 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233846088 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5188;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233846259 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1628;AVGPOST=0.9970;RSQ=0.9911;ERATE=0.0005;THETA=0.0006;AC=354;AN=2184 GT:DS:GL:BD 0.16208792 0
1 233846338 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0047;AVGPOST=0.9988;RSQ=0.8929;ERATE=0.0002;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233846433 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0032;AVGPOST=0.9947;RSQ=0.4443;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233846490 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0047;AVGPOST=0.9989;RSQ=0.8998;ERATE=0.0002;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 233846506 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0055;AVGPOST=0.9984;RSQ=0.8905;ERATE=0.0004;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 233846536 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7851;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233846599 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5543;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233846617 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233846704 rs67378837 GA G 6453 PASS INDEL;BAVGPOST=0.979;BRSQ=0.937;LDAF=0.1967;AVGPOST=0.9574;RSQ=0.8983;ERATE=0.0075;THETA=0.0003;AC=411;AN=2184 GT:DS:GL:BD 0.18818681 0
1 233846706 . AAG A 1280 PASS INDEL;BAVGPOST=0.922;BRSQ=0.688;LDAF=0.1503;AVGPOST=0.9418;RSQ=0.8357;ERATE=0.0024;THETA=0.0004;AC=344;AN=2184 GT:DS:GL:BD 0.15750916 0
1 233846763 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3955;AVGPOST=0.9981;RSQ=0.9965;ERATE=0.0006;THETA=0.0007;AC=865;AN=2184 GT:DS:GL:BD 0.39606228 0
1 233846813 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8893;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233846830 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7232;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233846858 . T TTATTTG 1662 PASS INDEL;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0098;AVGPOST=0.9987;RSQ=0.9522;ERATE=0.0004;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 233846876 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.9522;AVGPOST=0.9981;RSQ=0.9855;ERATE=0.0004;THETA=0.0005;AC=2080;AN=2184 GT:DS:GL:BD 0.95238096 1
1 233846975 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7655;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233847041 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.753;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6009;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233847103 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5883;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233847104 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7704;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233847199 . CAG C 32 PASS INDEL;BAVGPOST=0.999;BRSQ=0.779;LDAF=0.0027;AVGPOST=0.9973;RSQ=0.6140;ERATE=0.0007;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233847215 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233847294 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233847361 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233847415 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9610;ERATE=0.0003;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233847436 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5657;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233847517 . ACT A 10458 PASS INDEL;BAVGPOST=0.980;BRSQ=0.957;LDAF=0.2985;AVGPOST=0.9888;RSQ=0.9794;ERATE=0.0010;THETA=0.0003;AC=655;AN=2184 GT:DS:GL:BD 0.29990843 0
1 233847518 rs10544861 CTG C 34177 PASS INDEL;BAVGPOST=0.985;BRSQ=0.968;LDAF=0.3031;AVGPOST=0.9909;RSQ=0.9843;ERATE=0.0011;THETA=0.0006;AC=661;AN=2184 GT:DS:GL:BD 0.30265567 0
1 233847596 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233847634 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.747;LDAF=0.0037;AVGPOST=0.9985;RSQ=0.8458;ERATE=0.0002;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233847887 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.9098;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233847922 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8455;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233847945 . A AG 181 PASS INDEL;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7835;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233848002 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5642;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233848066 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8425;ERATE=0.0007;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233848331 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5392;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233848384 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5926;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233848404 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1879;AVGPOST=0.9971;RSQ=0.9930;ERATE=0.0004;THETA=0.0003;AC=412;AN=2184 GT:DS:GL:BD 0.18864469 0
1 233848661 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5994;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233848742 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0004;AVGPOST=0.9996;RSQ=0.6185;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233848777 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0029;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233848986 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.773;LDAF=0.0041;AVGPOST=0.9992;RSQ=0.9094;ERATE=0.0002;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233849042 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0014;AVGPOST=0.9993;RSQ=0.7885;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233849055 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7701;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233849121 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.782;LDAF=0.0038;AVGPOST=0.9992;RSQ=0.9086;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233849223 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0742;AVGPOST=0.9988;RSQ=0.9927;ERATE=0.0003;THETA=0.0004;AC=161;AN=2184 GT:DS:GL:BD 0.07371795 0
1 233849242 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6206;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233849243 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8523;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233849304 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0020;AVGPOST=0.9975;RSQ=0.5197;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233849389 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233849398 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=0.9997;RSQ=0.9468;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233849443 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0023;AVGPOST=0.9981;RSQ=0.7220;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233849451 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0018;AVGPOST=0.9988;RSQ=0.7554;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233849531 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0053;AVGPOST=0.9986;RSQ=0.8928;ERATE=0.0004;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 233849571 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.7859;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233849592 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6729;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233849684 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0052;AVGPOST=0.9997;RSQ=0.9709;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 233849700 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233849715 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0103;AVGPOST=0.9992;RSQ=0.9621;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 233849847 . ATG A 175 PASS INDEL;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0017;AVGPOST=0.9988;RSQ=0.7519;ERATE=0.0002;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233849869 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0096;AVGPOST=0.9991;RSQ=0.9563;ERATE=0.0002;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 233849936 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.890;LDAF=0.0076;AVGPOST=0.9991;RSQ=0.9462;ERATE=0.0003;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 233849940 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6773;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233850036 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233850189 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233850211 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0256;AVGPOST=0.9996;RSQ=0.9935;ERATE=0.0002;THETA=0.0001;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 233850243 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.741;LDAF=0.0025;AVGPOST=0.9989;RSQ=0.8103;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233850263 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0092;AVGPOST=0.9998;RSQ=0.9904;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 233850310 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0184;AVGPOST=0.9997;RSQ=0.9919;ERATE=0.0003;THETA=0.0005;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 233850714 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233850968 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7012;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233851020 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1011;AVGPOST=0.9995;RSQ=0.9976;ERATE=0.0002;THETA=0.0003;AC=220;AN=2184 GT:DS:GL:BD 0.10073260 0
1 233851055 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6232;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233851067 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0041;AVGPOST=0.9993;RSQ=0.9266;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233851387 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3926;AVGPOST=0.9992;RSQ=0.9986;ERATE=0.0003;THETA=0.0003;AC=858;AN=2184 GT:DS:GL:BD 0.39285713 0
1 233851451 . AC A 5 PASS INDEL;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5488;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233851464 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0028;AVGPOST=0.9982;RSQ=0.7770;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233851485 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0047;AVGPOST=0.9994;RSQ=0.9423;ERATE=0.0004;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 233851508 . A AT 17 PASS INDEL;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0030;AVGPOST=0.9978;RSQ=0.6970;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233851604 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.728;LDAF=0.0029;AVGPOST=0.9985;RSQ=0.7928;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233851649 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1019;AVGPOST=0.9987;RSQ=0.9949;ERATE=0.0003;THETA=0.0003;AC=221;AN=2184 GT:DS:GL:BD 0.10119048 0
1 233851665 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8044;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233851695 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0056;AVGPOST=0.9965;RSQ=0.7855;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 233851721 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8898;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233851753 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233851758 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1221;AVGPOST=0.9973;RSQ=0.9912;ERATE=0.0004;THETA=0.0004;AC=264;AN=2184 GT:DS:GL:BD 0.12087912 0
1 233851911 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0741;AVGPOST=0.9995;RSQ=0.9972;ERATE=0.0003;THETA=0.0004;AC=161;AN=2184 GT:DS:GL:BD 0.07371795 0
1 233852017 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0052;AVGPOST=0.9997;RSQ=0.9750;ERATE=0.0002;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 233852045 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0088;AVGPOST=0.9990;RSQ=0.9525;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 233852090 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3930;AVGPOST=0.9987;RSQ=0.9977;ERATE=0.0005;THETA=0.0003;AC=859;AN=2184 GT:DS:GL:BD 0.39331502 0
1 233852159 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1251;AVGPOST=0.9995;RSQ=0.9983;ERATE=0.0003;THETA=0.0004;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 233852201 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1010;AVGPOST=0.9996;RSQ=0.9983;ERATE=0.0003;THETA=0.0004;AC=220;AN=2184 GT:DS:GL:BD 0.10073260 0
1 233852331 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0093;AVGPOST=0.9996;RSQ=0.9811;ERATE=0.0004;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 233852350 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5869;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233852369 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.705;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5006;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233852400 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5724;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233852460 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233852471 . CAGAT C 602 PASS INDEL;BAVGPOST=0.999;BRSQ=0.873;LDAF=0.0043;AVGPOST=0.9985;RSQ=0.8546;ERATE=0.0003;THETA=0.0001;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233852551 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0183;AVGPOST=0.9990;RSQ=0.9783;ERATE=0.0004;THETA=0.0005;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 233852620 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9742;AVGPOST=0.9995;RSQ=0.9917;ERATE=0.0003;THETA=0.0003;AC=2128;AN=2184 GT:DS:GL:BD 0.97435898 1
1 233852695 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5822;AVGPOST=0.9990;RSQ=0.9982;ERATE=0.0004;THETA=0.0012;AC=1271;AN=2184 GT:DS:GL:BD 0.58195972 1
1 233852770 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7891;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233852793 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5756;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233852817 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6526;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233852827 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7512;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233853022 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0016;AVGPOST=0.9988;RSQ=0.6707;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233853226 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0052;AVGPOST=0.9996;RSQ=0.9623;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 233853412 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1616;AVGPOST=0.9987;RSQ=0.9957;ERATE=0.0003;THETA=0.0005;AC=354;AN=2184 GT:DS:GL:BD 0.16208792 0
1 233853464 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0036;AVGPOST=1.0000;RSQ=0.9940;ERATE=0.0002;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233853469 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5045;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233853497 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233853513 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.6190;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233853515 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233853600 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0121;AVGPOST=0.9995;RSQ=0.9818;ERATE=0.0003;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 233853790 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0046;AVGPOST=0.9975;RSQ=0.7561;ERATE=0.0007;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233853875 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1621;AVGPOST=0.9989;RSQ=0.9963;ERATE=0.0005;THETA=0.0002;AC=354;AN=2184 GT:DS:GL:BD 0.16208792 0
1 233853974 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0233;AVGPOST=0.9992;RSQ=0.9862;ERATE=0.0004;THETA=0.0003;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 233853983 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0038;AVGPOST=0.9988;RSQ=0.8790;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233854036 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1625;AVGPOST=0.9979;RSQ=0.9938;ERATE=0.0004;THETA=0.0003;AC=354;AN=2184 GT:DS:GL:BD 0.16208792 0
1 233854076 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6395;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233854154 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2603;AVGPOST=0.9979;RSQ=0.9957;ERATE=0.0004;THETA=0.0002;AC=568;AN=2184 GT:DS:GL:BD 0.26007327 0
1 233854185 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0189;AVGPOST=0.9992;RSQ=0.9812;ERATE=0.0003;THETA=0.0005;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 233854286 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.4181;AVGPOST=0.9964;RSQ=0.9944;ERATE=0.0006;THETA=0.0005;AC=914;AN=2184 GT:DS:GL:BD 0.41849816 0
1 233854313 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.886;LDAF=0.0098;AVGPOST=0.9978;RSQ=0.9089;ERATE=0.0004;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 233854327 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.978;LDAF=0.0233;AVGPOST=0.9964;RSQ=0.9398;ERATE=0.0008;THETA=0.0004;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 233854348 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3899;AVGPOST=0.9977;RSQ=0.9965;ERATE=0.0004;THETA=0.0005;AC=852;AN=2184 GT:DS:GL:BD 0.39010990 0
1 233854540 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0038;AVGPOST=0.9978;RSQ=0.7892;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233854545 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0019;AVGPOST=0.9985;RSQ=0.6593;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233854573 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.894;LDAF=0.0032;AVGPOST=0.9986;RSQ=0.8305;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233854742 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9743;AVGPOST=0.9998;RSQ=0.9957;ERATE=0.0002;THETA=0.0004;AC=2128;AN=2184 GT:DS:GL:BD 0.97435898 1
1 233854897 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8534;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233854906 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7280;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233854924 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9473;ERATE=0.0006;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233854981 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0740;AVGPOST=0.9996;RSQ=0.9978;ERATE=0.0002;THETA=0.0004;AC=161;AN=2184 GT:DS:GL:BD 0.07371795 0
1 233854983 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9729;AVGPOST=0.9993;RSQ=0.9890;ERATE=0.0002;THETA=0.0003;AC=2125;AN=2184 GT:DS:GL:BD 0.97298533 1
1 233855244 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0229;AVGPOST=1.0000;RSQ=0.9991;ERATE=0.0002;THETA=0.0001;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 233855246 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6418;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233855282 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6325;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233855315 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0179;AVGPOST=0.9998;RSQ=0.9952;ERATE=0.0003;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 233855328 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8481;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233855375 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7530;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233855465 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233855546 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233855667 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8259;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233855674 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5672;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233855707 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7452;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233855844 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233855973 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2045;AVGPOST=0.9957;RSQ=0.9911;ERATE=0.0007;THETA=0.0013;AC=447;AN=2184 GT:DS:GL:BD 0.20467032 0
1 233855996 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233856015 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0032;AVGPOST=0.9992;RSQ=0.8994;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233856053 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0123;AVGPOST=0.9991;RSQ=0.9698;ERATE=0.0003;THETA=0.0002;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 233856097 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9282;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233856172 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5192;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233856213 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=0.9988;RSQ=0.9014;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 233856316 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233856523 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.907;LDAF=0.0128;AVGPOST=0.9968;RSQ=0.8987;ERATE=0.0004;THETA=0.0002;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 233856535 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0203;AVGPOST=0.9964;RSQ=0.9261;ERATE=0.0005;THETA=0.0002;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 233856538 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.647;LDAF=0.0020;AVGPOST=0.9968;RSQ=0.3383;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233856571 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.543;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4568;ERATE=0.0005;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233856597 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.781;LDAF=0.0063;AVGPOST=0.9948;RSQ=0.6916;ERATE=0.0005;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 233856605 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.801;LDAF=0.0066;AVGPOST=0.9959;RSQ=0.7488;ERATE=0.0009;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 233856644 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1651;AVGPOST=0.9964;RSQ=0.9907;ERATE=0.0004;THETA=0.0013;AC=358;AN=2184 GT:DS:GL:BD 0.16391942 0
1 233856697 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2599;AVGPOST=0.9979;RSQ=0.9956;ERATE=0.0005;THETA=0.0003;AC=568;AN=2184 GT:DS:GL:BD 0.26007327 0
1 233856814 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6674;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233856851 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1711;AVGPOST=0.9945;RSQ=0.9862;ERATE=0.0003;THETA=0.0004;AC=372;AN=2184 GT:DS:GL:BD 0.17032968 0
1 233856879 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233856922 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1058;AVGPOST=0.9995;RSQ=0.9981;ERATE=0.0002;THETA=0.0004;AC=230;AN=2184 GT:DS:GL:BD 0.10531136 0
1 233856940 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8538;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233856953 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0102;AVGPOST=0.9998;RSQ=0.9910;ERATE=0.0002;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 233857020 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9994;RSQ=0.8676;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233857117 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0731;AVGPOST=0.9989;RSQ=0.9958;ERATE=0.0002;THETA=0.0003;AC=158;AN=2184 GT:DS:GL:BD 0.07234433 0
1 233857132 rs112219206 C CT 3054 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0325;AVGPOST=0.9987;RSQ=0.9833;ERATE=0.0003;THETA=0.0003;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 233857183 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233857534 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1621;AVGPOST=0.9983;RSQ=0.9945;ERATE=0.0004;THETA=0.0002;AC=354;AN=2184 GT:DS:GL:BD 0.16208792 0
1 233857612 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.8005;ERATE=0.0007;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233857669 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0183;AVGPOST=0.9991;RSQ=0.9796;ERATE=0.0003;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 233857676 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5241;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233857679 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.5638;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233857793 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.601;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.6037;ERATE=0.0006;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233857819 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4865;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233857865 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5673;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233858016 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4485;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233858084 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9333;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233858217 . TA T 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.767;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6155;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233858448 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9414;ERATE=0.0002;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233858485 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6953;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233858517 . TTTAC T 98 PASS INDEL;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5935;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233858715 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6705;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233858751 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2605;AVGPOST=0.9988;RSQ=0.9977;ERATE=0.0004;THETA=0.0003;AC=568;AN=2184 GT:DS:GL:BD 0.26007327 0
1 233858786 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233858871 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9799;ERATE=0.0002;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233858903 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0727;AVGPOST=0.9999;RSQ=0.9994;ERATE=0.0002;THETA=0.0007;AC=158;AN=2184 GT:DS:GL:BD 0.07234433 0
1 233858922 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9914;ERATE=0.0002;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 233859008 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.4240;AVGPOST=0.9969;RSQ=0.9954;ERATE=0.0009;THETA=0.0003;AC=926;AN=2184 GT:DS:GL:BD 0.42399266 0
1 233859026 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1633;AVGPOST=0.9968;RSQ=0.9914;ERATE=0.0003;THETA=0.0002;AC=354;AN=2184 GT:DS:GL:BD 0.16208792 0
1 233859315 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6134;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233859338 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0075;AVGPOST=0.9995;RSQ=0.9838;ERATE=0.0002;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 233859490 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9829;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 233859519 . TC T 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.777;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5434;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233859529 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2606;AVGPOST=0.9987;RSQ=0.9974;ERATE=0.0006;THETA=0.0003;AC=569;AN=2184 GT:DS:GL:BD 0.26053113 0
1 233859555 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8282;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233859681 . TTTC T 1772 PASS INDEL;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0182;AVGPOST=0.9989;RSQ=0.9744;ERATE=0.0004;THETA=0.0002;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 233859685 . TTC T 1282 PASS INDEL;BAVGPOST=0.956;BRSQ=0.420;LDAF=0.0776;AVGPOST=0.8901;RSQ=0.3801;ERATE=0.0060;THETA=0.0002;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 233859722 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3944;AVGPOST=0.9929;RSQ=0.9893;ERATE=0.0006;THETA=0.0003;AC=861;AN=2184 GT:DS:GL:BD 0.39423078 0
1 233859810 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5827;AVGPOST=0.9978;RSQ=0.9966;ERATE=0.0005;THETA=0.0003;AC=1271;AN=2184 GT:DS:GL:BD 0.58195972 1
1 233859871 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0118;AVGPOST=0.9968;RSQ=0.8968;ERATE=0.0006;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 233859872 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.653;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5514;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233859879 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.700;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6327;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233859966 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4655;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233860095 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233860202 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8919;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233860233 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5545;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233860251 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9460;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233860258 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8172;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233860259 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2605;AVGPOST=0.9986;RSQ=0.9974;ERATE=0.0003;THETA=0.0002;AC=568;AN=2184 GT:DS:GL:BD 0.26007327 0
1 233860299 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2604;AVGPOST=0.9983;RSQ=0.9966;ERATE=0.0005;THETA=0.0002;AC=568;AN=2184 GT:DS:GL:BD 0.26007327 0
1 233860318 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8338;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233860338 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233860342 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1048;AVGPOST=0.9995;RSQ=0.9977;ERATE=0.0004;THETA=0.0002;AC=228;AN=2184 GT:DS:GL:BD 0.10439561 0
1 233860359 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.911;LDAF=0.0159;AVGPOST=0.9984;RSQ=0.9596;ERATE=0.0003;THETA=0.0002;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 233860391 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0018;AVGPOST=0.9995;RSQ=0.8658;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233860411 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0244;AVGPOST=0.9987;RSQ=0.9805;ERATE=0.0003;THETA=0.0008;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 233860416 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0029;AVGPOST=0.9968;RSQ=0.5878;ERATE=0.0012;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233860437 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.901;LDAF=0.0125;AVGPOST=0.9957;RSQ=0.8931;ERATE=0.0003;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 233860450 . AG A 618 PASS INDEL;BAVGPOST=0.998;BRSQ=0.915;LDAF=0.0142;AVGPOST=0.9944;RSQ=0.8601;ERATE=0.0007;THETA=0.0002;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 233860471 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.808;LDAF=0.0035;AVGPOST=0.9984;RSQ=0.8450;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233860580 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8342;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233860651 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0064;AVGPOST=0.9945;RSQ=0.7298;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 233860706 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4989;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233860723 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5351;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233860797 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6122;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233860805 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.937;LDAF=0.0579;AVGPOST=0.9980;RSQ=0.9880;ERATE=0.0003;THETA=0.0004;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 233860822 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0038;AVGPOST=0.9989;RSQ=0.9058;ERATE=0.0002;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233860924 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0277;AVGPOST=0.9984;RSQ=0.9782;ERATE=0.0004;THETA=0.0005;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 233861092 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9244;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233861106 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233861158 rs59138239 T TC 11036 PASS INDEL;BAVGPOST=0.995;BRSQ=0.982;LDAF=0.1599;AVGPOST=0.9953;RSQ=0.9849;ERATE=0.0007;THETA=0.0004;AC=348;AN=2184 GT:DS:GL:BD 0.15934066 0
1 233861199 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0092;AVGPOST=0.9998;RSQ=0.9920;ERATE=0.0003;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 233861277 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233861379 . TAGTC T 8481 PASS INDEL;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0734;AVGPOST=0.9975;RSQ=0.9854;ERATE=0.0008;THETA=0.0005;AC=159;AN=2184 GT:DS:GL:BD 0.07280220 0
1 233861400 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9742;AVGPOST=0.9996;RSQ=0.9923;ERATE=0.0002;THETA=0.0003;AC=2128;AN=2184 GT:DS:GL:BD 0.97435898 1
1 233861512 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9335;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233861559 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5797;AVGPOST=0.9974;RSQ=0.9957;ERATE=0.0004;THETA=0.0004;AC=1265;AN=2184 GT:DS:GL:BD 0.57921243 1
1 233861616 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0059;AVGPOST=0.9987;RSQ=0.9037;ERATE=0.0003;THETA=0.0027;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 233861753 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0019;AVGPOST=0.9971;RSQ=0.4658;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233861802 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8379;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233861827 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0266;AVGPOST=0.9997;RSQ=0.9950;ERATE=0.0003;THETA=0.0003;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 233861841 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233861910 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0094;AVGPOST=0.9995;RSQ=0.9777;ERATE=0.0002;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 233862001 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.3921;AVGPOST=0.9994;RSQ=0.9988;ERATE=0.0003;THETA=0.0002;AC=857;AN=2184 GT:DS:GL:BD 0.39239928 0
1 233862153 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0095;AVGPOST=0.9993;RSQ=0.9716;ERATE=0.0003;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 233862279 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6562;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233862345 . CAG C 111 PASS INDEL;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6394;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233862351 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.860;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.8998;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233862431 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0067;AVGPOST=0.9962;RSQ=0.8047;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 233862448 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.5710;AVGPOST=0.9961;RSQ=0.9943;ERATE=0.0009;THETA=0.0033;AC=1246;AN=2184 GT:DS:GL:BD 0.57051283 1
1 233862584 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233862673 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.5693;AVGPOST=0.9928;RSQ=0.9887;ERATE=0.0013;THETA=0.0003;AC=1245;AN=2184 GT:DS:GL:BD 0.57005495 1
1 233862706 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6226;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233862830 . AT A 2364 PASS INDEL;BAVGPOST=0.990;BRSQ=0.943;LDAF=0.0852;AVGPOST=0.9904;RSQ=0.9570;ERATE=0.0008;THETA=0.0007;AC=181;AN=2184 GT:DS:GL:BD 0.08287546 0
1 233862831 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.1053;AVGPOST=0.9986;RSQ=0.9947;ERATE=0.0004;THETA=0.0006;AC=228;AN=2184 GT:DS:GL:BD 0.10439561 0
1 233862920 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7702;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233862961 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4310;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233863008 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233863143 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.3912;AVGPOST=0.9963;RSQ=0.9940;ERATE=0.0009;THETA=0.0003;AC=856;AN=2184 GT:DS:GL:BD 0.39194140 0
1 233863148 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1048;AVGPOST=0.9985;RSQ=0.9937;ERATE=0.0004;THETA=0.0003;AC=228;AN=2184 GT:DS:GL:BD 0.10439561 0
1 233863254 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.1050;AVGPOST=0.9986;RSQ=0.9943;ERATE=0.0004;THETA=0.0002;AC=228;AN=2184 GT:DS:GL:BD 0.10439561 0
1 233863259 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0073;AVGPOST=0.9991;RSQ=0.9556;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 233863333 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.677;LDAF=0.0050;AVGPOST=0.9983;RSQ=0.8517;ERATE=0.0004;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 233863336 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5106;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233863355 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.679;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8180;ERATE=0.0005;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233863451 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0188;AVGPOST=0.9999;RSQ=0.9977;ERATE=0.0002;THETA=0.0003;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 233863465 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0027;AVGPOST=0.9989;RSQ=0.8258;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233863795 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233864015 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0272;AVGPOST=0.9986;RSQ=0.9792;ERATE=0.0004;THETA=0.0006;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 233864034 rs35408948 CT C 36443 PASS INDEL;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.3905;AVGPOST=0.9894;RSQ=0.9836;ERATE=0.0027;THETA=0.0003;AC=853;AN=2184 GT:DS:GL:BD 0.39056778 0
1 233864346 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0067;AVGPOST=0.9984;RSQ=0.9318;ERATE=0.0005;THETA=0.0015;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 233864367 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233864368 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7905;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233864423 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0016;AVGPOST=0.9981;RSQ=0.5401;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233864465 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9741;AVGPOST=0.9993;RSQ=0.9881;ERATE=0.0003;THETA=0.0004;AC=2128;AN=2184 GT:DS:GL:BD 0.97435898 1
1 233864480 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7393;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233864482 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5726;AVGPOST=0.9948;RSQ=0.9920;ERATE=0.0006;THETA=0.0006;AC=1250;AN=2184 GT:DS:GL:BD 0.57234430 1
1 233864526 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0031;AVGPOST=0.9989;RSQ=0.8656;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233864555 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0040;AVGPOST=0.9995;RSQ=0.9576;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233864670 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0146;AVGPOST=0.9991;RSQ=0.9743;ERATE=0.0002;THETA=0.0007;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 233864689 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7568;ERATE=0.0004;THETA=0.0060;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233864737 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233864828 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0008;AVGPOST=0.9983;RSQ=0.2785;ERATE=0.0003;THETA=0.0048;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 233864963 . T TA 89 PASS INDEL;BAVGPOST=0.999;BRSQ=0.767;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6644;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233864987 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0087;AVGPOST=0.9996;RSQ=0.9808;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 233865084 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0024;AVGPOST=0.9970;RSQ=0.5884;ERATE=0.0004;THETA=0.0017;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233865126 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9739;AVGPOST=0.9987;RSQ=0.9790;ERATE=0.0004;THETA=0.0003;AC=2128;AN=2184 GT:DS:GL:BD 0.97435898 1
1 233865178 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.775;BRSQ=0.646;LDAF=0.4594;AVGPOST=0.7959;RSQ=0.6872;ERATE=0.0192;THETA=0.0004;AC=1062;AN=2184 GT:DS:GL:BD 0.48626372 0
1 233865209 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.772;BRSQ=0.200;LDAF=0.1475;AVGPOST=0.8712;RSQ=0.6103;ERATE=0.0023;THETA=0.0015;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 233865223 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.779;BRSQ=0.140;LDAF=0.2094;AVGPOST=0.7586;RSQ=0.4119;ERATE=0.0125;THETA=0.0016;AC=315;AN=2184 GT:DS:GL:BD 0.14423077 0
1 233865233 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.598;BRSQ=0.264;LDAF=0.7606;AVGPOST=0.8091;RSQ=0.6005;ERATE=0.0050;THETA=0.0004;AC=1715;AN=2184 GT:DS:GL:BD 0.78525639 1
1 233865443 rs61140215 CAAAAA C 85 PASS INDEL;BAVGPOST=0.574;BRSQ=0.012;LDAF=0.2237;AVGPOST=0.7000;RSQ=0.2924;ERATE=0.0184;THETA=0.0021;AC=296;AN=2184 GT:DS:GL:BD 0.13553114 0
1 233865487 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.807;BRSQ=0.673;LDAF=0.4521;AVGPOST=0.8178;RSQ=0.7331;ERATE=0.0329;THETA=0.0004;AC=1010;AN=2184 GT:DS:GL:BD 0.46245420 0
1 233865558 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0021;AVGPOST=0.9971;RSQ=0.4477;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233865609 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.624;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4553;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233865614 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.905;LDAF=0.0145;AVGPOST=0.9935;RSQ=0.8461;ERATE=0.0007;THETA=0.0014;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 233865644 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.750;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5037;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233865683 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.962;BRSQ=0.903;LDAF=0.2383;AVGPOST=0.9714;RSQ=0.9454;ERATE=0.0011;THETA=0.0029;AC=524;AN=2184 GT:DS:GL:BD 0.23992674 0
1 233865698 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.871;LDAF=0.0386;AVGPOST=0.9946;RSQ=0.9457;ERATE=0.0004;THETA=0.0034;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 233865715 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.658;LDAF=0.0120;AVGPOST=0.9941;RSQ=0.8175;ERATE=0.0004;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 233865893 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233865912 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0026;AVGPOST=0.9985;RSQ=0.7765;ERATE=0.0004;THETA=0.0034;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233865970 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.4978;ERATE=0.0004;THETA=0.0048;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233865977 . G GA 100 PASS INDEL;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6122;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233866003 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0025;AVGPOST=0.9975;RSQ=0.6319;ERATE=0.0003;THETA=0.0045;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233866022 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.964;LDAF=0.1578;AVGPOST=0.9854;RSQ=0.9600;ERATE=0.0020;THETA=0.0073;AC=344;AN=2184 GT:DS:GL:BD 0.15750916 0
1 233866076 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.934;LDAF=0.0239;AVGPOST=0.9972;RSQ=0.9537;ERATE=0.0005;THETA=0.0005;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 233866088 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.979;LDAF=0.1853;AVGPOST=0.9841;RSQ=0.9632;ERATE=0.0045;THETA=0.0038;AC=401;AN=2184 GT:DS:GL:BD 0.18360806 0
1 233866089 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233866109 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.771;LDAF=0.0031;AVGPOST=0.9991;RSQ=0.8676;ERATE=0.0003;THETA=0.0111;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233866163 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.964;LDAF=0.4953;AVGPOST=0.9805;RSQ=0.9742;ERATE=0.0008;THETA=0.0002;AC=1080;AN=2184 GT:DS:GL:BD 0.49450549 0
1 233866164 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0072;AVGPOST=0.9992;RSQ=0.9515;ERATE=0.0002;THETA=0.0008;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 233866173 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6329;ERATE=0.0002;THETA=0.0036;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233866231 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7340;ERATE=0.0002;THETA=0.0025;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233866547 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0088;AVGPOST=0.9996;RSQ=0.9785;ERATE=0.0003;THETA=0.0045;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 233866674 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.881;LDAF=0.0069;AVGPOST=0.9979;RSQ=0.9019;ERATE=0.0002;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 233866918 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7272;ERATE=0.0004;THETA=0.0035;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233867034 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.761;LDAF=0.0030;AVGPOST=0.9988;RSQ=0.8392;ERATE=0.0003;THETA=0.0053;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233867035 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8565;ERATE=0.0003;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233867043 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.775;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7082;ERATE=0.0003;THETA=0.0059;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233867051 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0174;AVGPOST=0.9999;RSQ=0.9975;ERATE=0.0002;THETA=0.0062;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 233867161 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233867297 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2879;AVGPOST=0.9972;RSQ=0.9947;ERATE=0.0005;THETA=0.0006;AC=629;AN=2184 GT:DS:GL:BD 0.28800365 0
1 233867507 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233867658 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0070;AVGPOST=0.9996;RSQ=0.9767;ERATE=0.0002;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 233867710 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233867714 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.844;LDAF=0.0029;AVGPOST=0.9978;RSQ=0.6991;ERATE=0.0006;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233867826 . G GA 116 PASS INDEL;BAVGPOST=0.977;BRSQ=0.519;LDAF=0.0452;AVGPOST=0.9429;RSQ=0.4702;ERATE=0.0149;THETA=0.0004;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 233867978 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0029;AVGPOST=0.9991;RSQ=0.8795;ERATE=0.0003;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233867979 . T TG 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.737;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5140;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233868004 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0039;AVGPOST=0.9996;RSQ=0.9526;ERATE=0.0002;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233868153 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2877;AVGPOST=0.9979;RSQ=0.9960;ERATE=0.0004;THETA=0.0007;AC=629;AN=2184 GT:DS:GL:BD 0.28800365 0
1 233868156 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.8313;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233868184 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.8252;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233868300 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0021;AVGPOST=0.9996;RSQ=0.9476;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233868366 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0028;AVGPOST=0.9969;RSQ=0.5631;ERATE=0.0005;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233868440 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233868442 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0061;AVGPOST=0.9990;RSQ=0.9413;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 233868443 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.2536;AVGPOST=0.9983;RSQ=0.9964;ERATE=0.0005;THETA=0.0005;AC=554;AN=2184 GT:DS:GL:BD 0.25366300 0
1 233868498 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233868538 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.746;LDAF=0.0065;AVGPOST=0.9971;RSQ=0.8291;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 233868611 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.979;LDAF=0.2333;AVGPOST=0.9936;RSQ=0.9883;ERATE=0.0004;THETA=0.0008;AC=509;AN=2184 GT:DS:GL:BD 0.23305860 0
1 233868722 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8643;ERATE=0.0004;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233868745 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0175;AVGPOST=0.9998;RSQ=0.9941;ERATE=0.0002;THETA=0.0006;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 233868867 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233868914 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0059;AVGPOST=0.9990;RSQ=0.9274;ERATE=0.0003;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 233868951 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.5274;AVGPOST=0.9932;RSQ=0.9900;ERATE=0.0012;THETA=0.0004;AC=1152;AN=2184 GT:DS:GL:BD 0.52747256 1
1 233868994 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.916;LDAF=0.0052;AVGPOST=0.9987;RSQ=0.8983;ERATE=0.0002;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 233869003 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3058;AVGPOST=0.9987;RSQ=0.9975;ERATE=0.0004;THETA=0.0003;AC=667;AN=2184 GT:DS:GL:BD 0.30540293 0
1 233869034 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9256;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233869132 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5274;AVGPOST=0.9937;RSQ=0.9904;ERATE=0.0009;THETA=0.0003;AC=1152;AN=2184 GT:DS:GL:BD 0.52747256 1
1 233869138 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.691;LDAF=0.0064;AVGPOST=0.9989;RSQ=0.9215;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 233869144 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0176;AVGPOST=0.9996;RSQ=0.9903;ERATE=0.0003;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 233869183 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0083;AVGPOST=0.9954;RSQ=0.7751;ERATE=0.0007;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 233869188 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.451;LDAF=0.0053;AVGPOST=0.9935;RSQ=0.4982;ERATE=0.0008;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233869344 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0117;AVGPOST=0.9904;RSQ=0.6647;ERATE=0.0011;THETA=0.0015;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 233869440 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6142;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233869458 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233869555 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0023;AVGPOST=0.9983;RSQ=0.6971;ERATE=0.0006;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233869576 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7335;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233869607 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6351;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233869627 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2859;AVGPOST=0.9985;RSQ=0.9970;ERATE=0.0005;THETA=0.0003;AC=625;AN=2184 GT:DS:GL:BD 0.28617215 0
1 233869667 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.1405;AVGPOST=0.9976;RSQ=0.9920;ERATE=0.0004;THETA=0.0003;AC=306;AN=2184 GT:DS:GL:BD 0.14010990 0
1 233869739 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5191;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233869827 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.583;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7186;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233869836 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233869841 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.6181;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233869924 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0145;AVGPOST=0.9993;RSQ=0.9838;ERATE=0.0002;THETA=0.0023;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 233869931 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9813;AVGPOST=0.9992;RSQ=0.9806;ERATE=0.0004;THETA=0.0003;AC=2144;AN=2184 GT:DS:GL:BD 0.98168498 1
1 233870111 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9365;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233870153 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.986;LDAF=0.2083;AVGPOST=0.9959;RSQ=0.9901;ERATE=0.0004;THETA=0.0002;AC=456;AN=2184 GT:DS:GL:BD 0.20879121 0
1 233870179 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6633;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233870325 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9816;AVGPOST=0.9998;RSQ=0.9942;ERATE=0.0002;THETA=0.0005;AC=2144;AN=2184 GT:DS:GL:BD 0.98168498 1
1 233870392 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6072;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233870420 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2868;AVGPOST=0.9979;RSQ=0.9956;ERATE=0.0005;THETA=0.0003;AC=628;AN=2184 GT:DS:GL:BD 0.28754580 0
1 233870461 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9936;ERATE=0.0003;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 233870523 . CA C 1090 PASS INDEL;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0043;AVGPOST=0.9988;RSQ=0.8962;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 233870550 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.923;LDAF=0.0076;AVGPOST=0.9995;RSQ=0.9684;ERATE=0.0005;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 233870567 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0018;AVGPOST=0.9999;RSQ=0.9762;ERATE=0.0002;THETA=0.0043;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233870569 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.776;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6204;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233870593 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9817;AVGPOST=1.0000;RSQ=0.9988;ERATE=0.0002;THETA=0.0003;AC=2144;AN=2184 GT:DS:GL:BD 0.98168498 1
1 233870694 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6675;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233870700 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0052;AVGPOST=0.9982;RSQ=0.8903;ERATE=0.0002;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 233870724 rs10689592 T TAAGA 145818 PASS INDEL;BAVGPOST=0.979;BRSQ=0.778;LDAF=0.9361;AVGPOST=0.9538;RSQ=0.6983;ERATE=0.0127;THETA=0.0002;AC=2078;AN=2184 GT:DS:GL:BD 0.95146519 1
1 233870738 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9807;AVGPOST=0.9991;RSQ=0.9788;ERATE=0.0003;THETA=0.0009;AC=2142;AN=2184 GT:DS:GL:BD 0.98076922 1
1 233870776 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9810;AVGPOST=0.9989;RSQ=0.9798;ERATE=0.0002;THETA=0.0004;AC=2142;AN=2184 GT:DS:GL:BD 0.98076922 1
1 233870908 rs3067905 TTACTC T 16905 PASS INDEL;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1414;AVGPOST=0.9957;RSQ=0.9866;ERATE=0.0003;THETA=0.0006;AC=308;AN=2184 GT:DS:GL:BD 0.14102565 0
1 233870945 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8824;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233871030 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2311;AVGPOST=0.9964;RSQ=0.9926;ERATE=0.0005;THETA=0.0028;AC=503;AN=2184 GT:DS:GL:BD 0.23031135 0
1 233871190 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9244;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233871236 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.9879;AVGPOST=0.9995;RSQ=0.9798;ERATE=0.0004;THETA=0.0002;AC=2158;AN=2184 GT:DS:GL:BD 0.98809522 1
1 233871281 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.9875;AVGPOST=0.9987;RSQ=0.9626;ERATE=0.0003;THETA=0.0004;AC=2158;AN=2184 GT:DS:GL:BD 0.98809522 1
1 233871683 . CAG C 631 PASS INDEL;BAVGPOST=0.999;BRSQ=0.791;LDAF=0.0038;AVGPOST=0.9978;RSQ=0.7481;ERATE=0.0004;THETA=0.0022;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233871730 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0014;AVGPOST=0.9996;RSQ=0.8847;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233871774 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.2539;AVGPOST=0.9976;RSQ=0.9955;ERATE=0.0003;THETA=0.0005;AC=552;AN=2184 GT:DS:GL:BD 0.25274727 0
1 233871787 . TA T 538 PASS INDEL;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.8923;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233871793 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7361;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233871801 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233871911 . CTGA C 158 PASS INDEL;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0020;AVGPOST=0.9974;RSQ=0.4045;ERATE=0.0004;THETA=0.0028;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233871946 . TTTTG T 218 PASS INDEL;BAVGPOST=0.999;BRSQ=0.726;LDAF=0.0033;AVGPOST=0.9978;RSQ=0.7525;ERATE=0.0004;THETA=0.0017;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233872014 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0015;AVGPOST=0.9981;RSQ=0.5064;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233872051 . CA C 279 PASS INDEL;BAVGPOST=0.998;BRSQ=0.731;LDAF=0.0057;AVGPOST=0.9957;RSQ=0.7592;ERATE=0.0002;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 233872092 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0024;AVGPOST=0.9975;RSQ=0.6661;ERATE=0.0003;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233872108 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0003;AVGPOST=0.9995;RSQ=0.1162;ERATE=0.0004;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 233872122 . AC A 148 PASS INDEL;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0022;AVGPOST=0.9982;RSQ=0.6515;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233872124 rs66773268 CTA C 74085 PASS INDEL;BAVGPOST=0.997;BRSQ=0.942;LDAF=0.9777;AVGPOST=0.9944;RSQ=0.9075;ERATE=0.0006;THETA=0.0064;AC=2138;AN=2184 GT:DS:GL:BD 0.97893775 1
1 233872440 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.9813;AVGPOST=0.9986;RSQ=0.9726;ERATE=0.0003;THETA=0.0006;AC=2142;AN=2184 GT:DS:GL:BD 0.98076922 1
1 233872520 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0068;AVGPOST=0.9991;RSQ=0.9384;ERATE=0.0004;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 233872551 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0068;AVGPOST=0.9988;RSQ=0.9169;ERATE=0.0006;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 233872568 . A AG 6885 PASS INDEL;BAVGPOST=0.935;BRSQ=0.838;LDAF=0.2320;AVGPOST=0.9248;RSQ=0.8480;ERATE=0.0095;THETA=0.0003;AC=505;AN=2184 GT:DS:GL:BD 0.23122710 0
1 233872745 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0061;AVGPOST=0.9997;RSQ=0.9787;ERATE=0.0002;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 233872764 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2878;AVGPOST=0.9954;RSQ=0.9923;ERATE=0.0006;THETA=0.0004;AC=628;AN=2184 GT:DS:GL:BD 0.28754580 0
1 233872830 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.799;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8774;ERATE=0.0004;THETA=0.0019;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233872858 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0146;AVGPOST=0.9992;RSQ=0.9797;ERATE=0.0002;THETA=0.0006;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 233872994 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0001;AVGPOST=0.9999;RSQ=0.0499;ERATE=0.0003;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 233873053 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.646;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.7817;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233873126 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5550;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233873147 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2336;AVGPOST=0.9988;RSQ=0.9976;ERATE=0.0003;THETA=0.0004;AC=508;AN=2184 GT:DS:GL:BD 0.23260073 0
1 233873151 . CAAT C 272 PASS INDEL;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7393;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233873161 . GATT G 92 PASS INDEL;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0020;AVGPOST=0.9978;RSQ=0.5290;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233873187 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0176;AVGPOST=0.9995;RSQ=0.9886;ERATE=0.0002;THETA=0.0002;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 233873215 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.948;LDAF=0.0092;AVGPOST=0.9998;RSQ=0.9884;ERATE=0.0002;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 233873288 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.0039;AVGPOST=0.9985;RSQ=0.8353;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233873301 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0044;AVGPOST=0.9978;RSQ=0.8065;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233873329 . TTG T 657 PASS INDEL;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0064;AVGPOST=0.9992;RSQ=0.9348;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 233873422 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.762;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6272;ERATE=0.0003;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233873610 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0323;AVGPOST=0.9983;RSQ=0.9785;ERATE=0.0003;THETA=0.0003;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 233873655 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233873753 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233873977 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.9814;AVGPOST=0.9994;RSQ=0.9883;ERATE=0.0003;THETA=0.0003;AC=2144;AN=2184 GT:DS:GL:BD 0.98168498 1
1 233874012 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0002;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233874054 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1498;AVGPOST=0.9979;RSQ=0.9938;ERATE=0.0003;THETA=0.0003;AC=328;AN=2184 GT:DS:GL:BD 0.15018316 0
1 233874159 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0019;AVGPOST=0.9994;RSQ=0.8566;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233874160 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9335;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233874180 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.867;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9393;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233874187 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233874203 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6502;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233874219 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233874385 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233874415 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6589;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233874479 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9734;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233874633 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2419;AVGPOST=0.9989;RSQ=0.9961;ERATE=0.0004;THETA=0.0006;AC=526;AN=2184 GT:DS:GL:BD 0.24084249 0
1 233874762 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.860;LDAF=0.0038;AVGPOST=0.9993;RSQ=0.9164;ERATE=0.0004;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233874866 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.913;LDAF=0.0089;AVGPOST=0.9995;RSQ=0.9720;ERATE=0.0002;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 233874923 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2229;AVGPOST=0.9968;RSQ=0.9936;ERATE=0.0005;THETA=0.0009;AC=485;AN=2184 GT:DS:GL:BD 0.22206959 0
1 233874943 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5729;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233874954 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4969;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233874967 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0019;AVGPOST=0.9975;RSQ=0.5372;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233875131 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0040;AVGPOST=0.9982;RSQ=0.8437;ERATE=0.0002;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233875134 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233875216 . ATTACT A 376 PASS INDEL;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.5864;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233875328 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7962;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233875350 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6092;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233875401 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0057;AVGPOST=0.9995;RSQ=0.9647;ERATE=0.0002;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 233875452 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6265;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233875472 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.7269;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233875517 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233875548 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233875549 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.907;LDAF=0.0207;AVGPOST=0.9982;RSQ=0.9608;ERATE=0.0003;THETA=0.0003;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 233875669 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0029;AVGPOST=0.9988;RSQ=0.8569;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233875677 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0082;AVGPOST=0.9989;RSQ=0.9395;ERATE=0.0004;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 233875822 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.926;LDAF=0.2803;AVGPOST=0.9848;RSQ=0.9738;ERATE=0.0008;THETA=0.0006;AC=619;AN=2184 GT:DS:GL:BD 0.28342491 0
1 233875866 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.703;LDAF=0.9522;AVGPOST=0.9561;RSQ=0.6444;ERATE=0.0053;THETA=0.0004;AC=2103;AN=2184 GT:DS:GL:BD 0.96291208 1
1 233875891 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0076;AVGPOST=0.9985;RSQ=0.9267;ERATE=0.0004;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 233875922 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8311;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233875943 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.905;LDAF=0.0090;AVGPOST=0.9974;RSQ=0.9004;ERATE=0.0002;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 233875981 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.698;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7895;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233876003 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0006;AVGPOST=0.9989;RSQ=0.3893;ERATE=0.0003;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 233876179 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0024;AVGPOST=0.9982;RSQ=0.6913;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233876215 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2592;AVGPOST=0.9972;RSQ=0.9944;ERATE=0.0004;THETA=0.0002;AC=567;AN=2184 GT:DS:GL:BD 0.25961539 0
1 233876275 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7821;ERATE=0.0005;THETA=0.0028;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233876299 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.746;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233876605 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.4616;AVGPOST=0.9957;RSQ=0.9940;ERATE=0.0005;THETA=0.0004;AC=1009;AN=2184 GT:DS:GL:BD 0.46199635 0
1 233876684 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6256;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233876760 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4932;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233876923 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.950;BRSQ=0.842;LDAF=0.2151;AVGPOST=0.9050;RSQ=0.7696;ERATE=0.0419;THETA=0.0005;AC=430;AN=2184 GT:DS:GL:BD 0.19688645 0
1 233876947 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.921;LDAF=0.9673;AVGPOST=0.9797;RSQ=0.7597;ERATE=0.0026;THETA=0.0001;AC=2124;AN=2184 GT:DS:GL:BD 0.97252744 1
1 233876972 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.664;LDAF=0.0046;AVGPOST=0.9950;RSQ=0.5638;ERATE=0.0007;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233877049 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0087;AVGPOST=0.9970;RSQ=0.8482;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 233877154 . AT A 17 PASS INDEL;BAVGPOST=0.998;BRSQ=0.354;LDAF=0.0087;AVGPOST=0.9856;RSQ=0.3997;ERATE=0.0014;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233877297 rs74587482 A AT 96993 PASS INDEL;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.9809;AVGPOST=0.9983;RSQ=0.9630;ERATE=0.0004;THETA=0.0003;AC=2144;AN=2184 GT:DS:GL:BD 0.98168498 1
1 233877427 . A AT 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.746;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4651;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233877478 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.6107;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233877514 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7429;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233877558 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.9816;AVGPOST=0.9997;RSQ=0.9919;ERATE=0.0003;THETA=0.0003;AC=2144;AN=2184 GT:DS:GL:BD 0.98168498 1
1 233877616 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233877691 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1502;AVGPOST=0.9985;RSQ=0.9947;ERATE=0.0005;THETA=0.0005;AC=328;AN=2184 GT:DS:GL:BD 0.15018316 0
1 233877700 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8020;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233877817 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5792;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233877852 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.4624;AVGPOST=0.9984;RSQ=0.9973;ERATE=0.0005;THETA=0.0005;AC=1010;AN=2184 GT:DS:GL:BD 0.46245420 0
1 233877882 . TG T 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0027;AVGPOST=0.9961;RSQ=0.4545;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233877940 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.5829;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233878091 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.9794;AVGPOST=0.9990;RSQ=0.9782;ERATE=0.0004;THETA=0.0004;AC=2140;AN=2184 GT:DS:GL:BD 0.97985345 1
1 233878121 . TG T 55 PASS INDEL;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7434;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233878123 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.526;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6235;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233878151 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.973;LDAF=0.3097;AVGPOST=0.9851;RSQ=0.9758;ERATE=0.0023;THETA=0.0002;AC=677;AN=2184 GT:DS:GL:BD 0.30998167 0
1 233878165 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.694;LDAF=0.0046;AVGPOST=0.9969;RSQ=0.7571;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 233878341 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.9174;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233878427 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.982;LDAF=0.1153;AVGPOST=0.9944;RSQ=0.9802;ERATE=0.0005;THETA=0.0003;AC=251;AN=2184 GT:DS:GL:BD 0.11492674 0
1 233878445 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9767;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233878456 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.922;LDAF=0.0271;AVGPOST=0.9960;RSQ=0.9448;ERATE=0.0003;THETA=0.0007;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 233878733 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3126;AVGPOST=0.9995;RSQ=0.9989;ERATE=0.0003;THETA=0.0004;AC=682;AN=2184 GT:DS:GL:BD 0.31227106 0
1 233878775 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3145;AVGPOST=0.9964;RSQ=0.9935;ERATE=0.0006;THETA=0.0002;AC=686;AN=2184 GT:DS:GL:BD 0.31410256 0
1 233878831 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.957;LDAF=0.9816;AVGPOST=0.9989;RSQ=0.9746;ERATE=0.0003;THETA=0.0002;AC=2144;AN=2184 GT:DS:GL:BD 0.98168498 1
1 233878941 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5392;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233879060 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5158;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233879121 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.6974;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233879174 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.798;LDAF=0.0025;AVGPOST=0.9994;RSQ=0.8910;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233879182 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.700;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.6983;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233879281 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.5111;AVGPOST=0.9968;RSQ=0.9948;ERATE=0.0008;THETA=0.0014;AC=1116;AN=2184 GT:DS:GL:BD 0.51098901 1
1 233879329 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.9814;AVGPOST=0.9993;RSQ=0.9832;ERATE=0.0003;THETA=0.0003;AC=2144;AN=2184 GT:DS:GL:BD 0.98168498 1
1 233879404 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0087;AVGPOST=0.9990;RSQ=0.9438;ERATE=0.0004;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 233879413 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0044;AVGPOST=0.9985;RSQ=0.8818;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233879469 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7131;ERATE=0.0009;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233879501 . TC T 46 PASS INDEL;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0017;AVGPOST=0.9973;RSQ=0.4718;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233879546 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0107;AVGPOST=0.9991;RSQ=0.9684;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 233879568 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0026;AVGPOST=0.9981;RSQ=0.7011;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233879654 . TG T 577 PASS INDEL;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0069;AVGPOST=0.9989;RSQ=0.9483;ERATE=0.0002;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 233879699 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233879726 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9996;RSQ=0.9116;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233879774 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1402;AVGPOST=0.9979;RSQ=0.9930;ERATE=0.0004;THETA=0.0004;AC=305;AN=2184 GT:DS:GL:BD 0.13965201 0
1 233879970 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0143;AVGPOST=0.9995;RSQ=0.9858;ERATE=0.0003;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 233879990 rs36088863 A AT 10695 PASS INDEL;BAVGPOST=0.988;BRSQ=0.972;LDAF=0.2168;AVGPOST=0.9887;RSQ=0.9780;ERATE=0.0005;THETA=0.0004;AC=474;AN=2184 GT:DS:GL:BD 0.21703297 0
1 233879994 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.960;LDAF=0.2099;AVGPOST=0.9813;RSQ=0.9623;ERATE=0.0040;THETA=0.0003;AC=460;AN=2184 GT:DS:GL:BD 0.21062271 0
1 233879995 . CT C 11335 PASS INDEL;BAVGPOST=0.987;BRSQ=0.971;LDAF=0.2196;AVGPOST=0.9876;RSQ=0.9771;ERATE=0.0004;THETA=0.0003;AC=481;AN=2184 GT:DS:GL:BD 0.22023809 0
1 233879996 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.976;LDAF=0.2182;AVGPOST=0.9914;RSQ=0.9835;ERATE=0.0004;THETA=0.0002;AC=478;AN=2184 GT:DS:GL:BD 0.21886447 0
1 233880075 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0069;AVGPOST=0.9984;RSQ=0.8991;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 233880205 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.9735;AVGPOST=0.9995;RSQ=0.9913;ERATE=0.0003;THETA=0.0003;AC=2126;AN=2184 GT:DS:GL:BD 0.97344321 1
1 233880263 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7618;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233880264 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233880283 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5188;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233880339 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0002;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233880423 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.9811;AVGPOST=0.9989;RSQ=0.9773;ERATE=0.0003;THETA=0.0004;AC=2144;AN=2184 GT:DS:GL:BD 0.98168498 1
1 233880500 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0026;AVGPOST=0.9987;RSQ=0.8046;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233880520 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7186;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233880686 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233880717 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233880721 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.9817;AVGPOST=0.9999;RSQ=0.9965;ERATE=0.0002;THETA=0.0010;AC=2144;AN=2184 GT:DS:GL:BD 0.98168498 1
1 233880726 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0006;AVGPOST=0.9990;RSQ=0.3332;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233880830 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5664;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233880904 . TC T 1335 PASS INDEL;BAVGPOST=0.996;BRSQ=0.842;LDAF=0.0133;AVGPOST=0.9960;RSQ=0.8898;ERATE=0.0004;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 233880905 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.979;LDAF=0.1408;AVGPOST=0.9956;RSQ=0.9873;ERATE=0.0005;THETA=0.0004;AC=304;AN=2184 GT:DS:GL:BD 0.13919415 0
1 233880955 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9816;AVGPOST=0.9998;RSQ=0.9942;ERATE=0.0003;THETA=0.0002;AC=2144;AN=2184 GT:DS:GL:BD 0.98168498 1
1 233881048 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.9798;AVGPOST=0.9999;RSQ=0.9979;ERATE=0.0002;THETA=0.0004;AC=2140;AN=2184 GT:DS:GL:BD 0.97985345 1
1 233881109 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.6088;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233881123 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5112;AVGPOST=0.9989;RSQ=0.9982;ERATE=0.0004;THETA=0.0004;AC=1116;AN=2184 GT:DS:GL:BD 0.51098901 1
1 233881178 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0229;AVGPOST=0.9989;RSQ=0.9797;ERATE=0.0002;THETA=0.0007;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 233881299 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.901;LDAF=0.0089;AVGPOST=0.9977;RSQ=0.8973;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 233881380 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0087;AVGPOST=0.9999;RSQ=0.9949;ERATE=0.0002;THETA=0.0034;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 233881658 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4630;AVGPOST=0.9989;RSQ=0.9981;ERATE=0.0003;THETA=0.0004;AC=1011;AN=2184 GT:DS:GL:BD 0.46291208 0
1 233881695 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0025;AVGPOST=0.9994;RSQ=0.9059;ERATE=0.0002;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233881909 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233881963 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9814;AVGPOST=0.9993;RSQ=0.9841;ERATE=0.0003;THETA=0.0002;AC=2144;AN=2184 GT:DS:GL:BD 0.98168498 1
1 233881966 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.0140;AVGPOST=0.9993;RSQ=0.9773;ERATE=0.0003;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 233881978 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.942;LDAF=0.0415;AVGPOST=0.9976;RSQ=0.9771;ERATE=0.0004;THETA=0.0003;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 233882022 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8677;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233882026 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.975;LDAF=0.9759;AVGPOST=0.9927;RSQ=0.8892;ERATE=0.0008;THETA=0.0003;AC=2132;AN=2184 GT:DS:GL:BD 0.97619045 1
1 233882176 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.920;BRSQ=0.507;LDAF=0.8784;AVGPOST=0.8694;RSQ=0.5248;ERATE=0.0220;THETA=0.0005;AC=1993;AN=2184 GT:DS:GL:BD 0.91254580 1
1 233882303 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.9734;AVGPOST=0.9997;RSQ=0.9950;ERATE=0.0003;THETA=0.0006;AC=2126;AN=2184 GT:DS:GL:BD 0.97344321 1
1 233882340 . CT C 9 PASS INDEL;BAVGPOST=0.999;BRSQ=0.602;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.3503;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233882353 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2753;AVGPOST=0.9950;RSQ=0.9891;ERATE=0.0012;THETA=0.0002;AC=600;AN=2184 GT:DS:GL:BD 0.27472529 0
1 233882384 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1500;AVGPOST=0.9990;RSQ=0.9965;ERATE=0.0003;THETA=0.0005;AC=328;AN=2184 GT:DS:GL:BD 0.15018316 0
1 233882627 . ATAT A 43 PASS INDEL;BAVGPOST=0.998;BRSQ=0.641;LDAF=0.0068;AVGPOST=0.9940;RSQ=0.6721;ERATE=0.0012;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 233882664 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233882806 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0006;AVGPOST=0.9988;RSQ=0.2776;ERATE=0.0003;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 233882845 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.882;LDAF=0.0090;AVGPOST=0.9968;RSQ=0.8586;ERATE=0.0002;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 233882922 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.924;LDAF=0.0198;AVGPOST=0.9973;RSQ=0.9473;ERATE=0.0004;THETA=0.0004;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 233882981 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233883047 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4639;AVGPOST=0.9969;RSQ=0.9956;ERATE=0.0006;THETA=0.0004;AC=1013;AN=2184 GT:DS:GL:BD 0.46382785 0
1 233883053 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2245;AVGPOST=0.9972;RSQ=0.9943;ERATE=0.0003;THETA=0.0002;AC=488;AN=2184 GT:DS:GL:BD 0.22344323 0
1 233883072 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5345;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233883092 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.5540;ERATE=0.0006;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233883183 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1507;AVGPOST=0.9992;RSQ=0.9973;ERATE=0.0003;THETA=0.0010;AC=330;AN=2184 GT:DS:GL:BD 0.15109891 0
1 233883195 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.9816;AVGPOST=0.9998;RSQ=0.9942;ERATE=0.0003;THETA=0.0007;AC=2144;AN=2184 GT:DS:GL:BD 0.98168498 1
1 233883228 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.6162;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233883253 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233883289 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0075;AVGPOST=0.9988;RSQ=0.9262;ERATE=0.0004;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 233883341 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.838;LDAF=0.0057;AVGPOST=0.9975;RSQ=0.8328;ERATE=0.0004;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 233883366 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.726;LDAF=0.0176;AVGPOST=0.9864;RSQ=0.7004;ERATE=0.0028;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 233883420 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.706;LDAF=0.0029;AVGPOST=0.9961;RSQ=0.4205;ERATE=0.0009;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233883468 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5181;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233883469 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.785;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7014;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233883497 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6262;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233883508 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8390;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233883541 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5087;AVGPOST=0.9950;RSQ=0.9933;ERATE=0.0004;THETA=0.0004;AC=1113;AN=2184 GT:DS:GL:BD 0.50961536 1
1 233883549 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.622;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9449;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233883583 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0071;AVGPOST=0.9981;RSQ=0.8802;ERATE=0.0005;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 233883604 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.949;LDAF=0.1468;AVGPOST=0.9923;RSQ=0.9773;ERATE=0.0004;THETA=0.0003;AC=323;AN=2184 GT:DS:GL:BD 0.14789377 0
1 233883605 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.747;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.5746;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233883630 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0058;AVGPOST=0.9993;RSQ=0.9574;ERATE=0.0002;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 233883647 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.0141;AVGPOST=0.9993;RSQ=0.9770;ERATE=0.0003;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 233883720 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.9816;AVGPOST=0.9995;RSQ=0.9875;ERATE=0.0003;THETA=0.0005;AC=2144;AN=2184 GT:DS:GL:BD 0.98168498 1
1 233883729 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.9799;AVGPOST=0.9993;RSQ=0.9842;ERATE=0.0004;THETA=0.0003;AC=2140;AN=2184 GT:DS:GL:BD 0.97985345 1
1 233883786 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.854;LDAF=0.0001;AVGPOST=0.9998;RSQ=0.0498;ERATE=0.0003;THETA=0.0007;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 233884154 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6564;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233884257 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5954;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233884308 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.9730;AVGPOST=0.9989;RSQ=0.9809;ERATE=0.0004;THETA=0.0004;AC=2126;AN=2184 GT:DS:GL:BD 0.97344321 1
1 233884310 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.9811;AVGPOST=0.9988;RSQ=0.9756;ERATE=0.0004;THETA=0.0006;AC=2144;AN=2184 GT:DS:GL:BD 0.98168498 1
1 233884325 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0067;AVGPOST=0.9993;RSQ=0.9562;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 233884375 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.571;LDAF=0.0020;AVGPOST=0.9968;RSQ=0.3668;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233884539 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233884572 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0066;AVGPOST=0.9996;RSQ=0.9747;ERATE=0.0002;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 233884576 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3065;AVGPOST=0.9984;RSQ=0.9970;ERATE=0.0004;THETA=0.0003;AC=668;AN=2184 GT:DS:GL:BD 0.30586082 0
1 233884757 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0142;AVGPOST=0.9998;RSQ=0.9926;ERATE=0.0003;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 233884806 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0067;AVGPOST=0.9993;RSQ=0.9511;ERATE=0.0004;THETA=0.0008;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 233884919 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.650;LDAF=0.0024;AVGPOST=0.9980;RSQ=0.6981;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233884957 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.634;LDAF=0.0040;AVGPOST=0.9950;RSQ=0.4850;ERATE=0.0006;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233884968 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1504;AVGPOST=0.9947;RSQ=0.9831;ERATE=0.0007;THETA=0.0008;AC=326;AN=2184 GT:DS:GL:BD 0.14926741 0
1 233884971 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.985;LDAF=0.3176;AVGPOST=0.9882;RSQ=0.9802;ERATE=0.0015;THETA=0.0003;AC=687;AN=2184 GT:DS:GL:BD 0.31456044 0
1 233884992 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.909;LDAF=0.0039;AVGPOST=0.9987;RSQ=0.8596;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233885053 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.676;LDAF=0.0234;AVGPOST=0.9842;RSQ=0.7583;ERATE=0.0006;THETA=0.0002;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 233885057 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.413;LDAF=0.0154;AVGPOST=0.9843;RSQ=0.6050;ERATE=0.0011;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 233885113 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.870;LDAF=0.1515;AVGPOST=0.9903;RSQ=0.9688;ERATE=0.0006;THETA=0.0045;AC=330;AN=2184 GT:DS:GL:BD 0.15109891 0
1 233885128 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.732;LDAF=0.0181;AVGPOST=0.9846;RSQ=0.6631;ERATE=0.0013;THETA=0.0002;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 233885174 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.898;BRSQ=0.759;LDAF=0.2350;AVGPOST=0.9556;RSQ=0.9117;ERATE=0.0008;THETA=0.0032;AC=536;AN=2184 GT:DS:GL:BD 0.24542125 0
1 233885179 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.898;BRSQ=0.757;LDAF=0.2423;AVGPOST=0.9680;RSQ=0.9351;ERATE=0.0005;THETA=0.0013;AC=550;AN=2184 GT:DS:GL:BD 0.25183150 0
1 233885195 rs67558793 C CA 204 PASS INDEL;BAVGPOST=0.587;BRSQ=0.236;LDAF=0.6048;AVGPOST=0.7708;RSQ=0.6178;ERATE=0.0098;THETA=0.0003;AC=1322;AN=2184 GT:DS:GL:BD 0.60531133 1
1 233885221 rs59142483 AAAG A 15394 PASS INDEL;BAVGPOST=0.850;BRSQ=0.372;LDAF=0.7877;AVGPOST=0.7708;RSQ=0.4002;ERATE=0.0600;THETA=0.0027;AC=1874;AN=2184 GT:DS:GL:BD 0.85805863 1
1 233885300 . GCACCATC G 837 PASS INDEL;BAVGPOST=0.998;BRSQ=0.869;LDAF=0.0065;AVGPOST=0.9989;RSQ=0.9255;ERATE=0.0004;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 233885414 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.791;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.8958;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233885432 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.889;LDAF=0.0179;AVGPOST=0.9953;RSQ=0.8940;ERATE=0.0004;THETA=0.0010;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 233885433 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0018;AVGPOST=0.9994;RSQ=0.8755;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233885543 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4606;AVGPOST=0.9960;RSQ=0.9937;ERATE=0.0005;THETA=0.0004;AC=1006;AN=2184 GT:DS:GL:BD 0.46062270 0
1 233885558 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0126;AVGPOST=0.9994;RSQ=0.9829;ERATE=0.0002;THETA=0.0015;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 233885593 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8371;ERATE=0.0003;THETA=0.0030;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233885631 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=1.0000;RSQ=0.9966;ERATE=0.0002;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 233885668 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233885725 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0001;AVGPOST=0.9998;RSQ=0.0498;ERATE=0.0003;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 233885737 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7129;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233885738 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233885773 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6265;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233885795 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5968;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233885926 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0073;AVGPOST=0.9982;RSQ=0.9040;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 233885942 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8893;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233886012 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233886053 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.896;LDAF=0.0063;AVGPOST=0.9988;RSQ=0.9277;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 233886057 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.7246;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233886072 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0068;AVGPOST=0.9996;RSQ=0.9775;ERATE=0.0002;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 233886089 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0062;AVGPOST=0.9989;RSQ=0.9269;ERATE=0.0006;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 233886139 . C CT 45289 PASS INDEL;BAVGPOST=1.000;BRSQ=0;LDAF=0.9998;AVGPOST=0.9996;RSQ=0.0496;ERATE=0.0003;THETA=0.0011;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 233886142 rs77209792 T TTA 1162 PASS INDEL;BAVGPOST=0.701;BRSQ=0.334;LDAF=0.3188;AVGPOST=0.6827;RSQ=0.4191;ERATE=0.0923;THETA=0.0002;AC=498;AN=2184 GT:DS:GL:BD 0.22802198 0
1 233886168 rs34132036 C CA 89002 PASS INDEL;BAVGPOST=0.998;BRSQ=0.602;LDAF=0.9945;AVGPOST=0.9941;RSQ=0.5939;ERATE=0.0006;THETA=0.0003;AC=2173;AN=2184 GT:DS:GL:BD 0.99496335 1
1 233886182 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0004;AVGPOST=0.9997;RSQ=0.7164;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233886201 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0047;AVGPOST=0.9996;RSQ=0.9583;ERATE=0.0003;THETA=0.0045;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 233886217 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.1508;AVGPOST=0.9982;RSQ=0.9944;ERATE=0.0005;THETA=0.0005;AC=329;AN=2184 GT:DS:GL:BD 0.15064102 0
1 233886228 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0028;AVGPOST=0.9995;RSQ=0.9291;ERATE=0.0002;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233886356 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6295;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233886374 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7952;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233886542 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2655;AVGPOST=0.9957;RSQ=0.9923;ERATE=0.0005;THETA=0.0002;AC=579;AN=2184 GT:DS:GL:BD 0.26510990 0
1 233886562 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8392;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233886621 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0078;AVGPOST=0.9998;RSQ=0.9859;ERATE=0.0003;THETA=0.0008;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 233886741 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0019;AVGPOST=0.9973;RSQ=0.5520;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233887025 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.9110;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233887046 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6544;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233887067 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3035;AVGPOST=0.9966;RSQ=0.9938;ERATE=0.0009;THETA=0.0005;AC=663;AN=2184 GT:DS:GL:BD 0.30357143 0
1 233887101 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0027;AVGPOST=0.9982;RSQ=0.7520;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233887113 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2594;AVGPOST=0.9982;RSQ=0.9963;ERATE=0.0004;THETA=0.0008;AC=566;AN=2184 GT:DS:GL:BD 0.25915751 0
1 233887212 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0097;AVGPOST=0.9998;RSQ=0.9896;ERATE=0.0003;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 233887315 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5706;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233887335 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.950;LDAF=0.0063;AVGPOST=0.9983;RSQ=0.8989;ERATE=0.0004;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 233887404 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0073;AVGPOST=0.9988;RSQ=0.9295;ERATE=0.0002;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 233887430 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7515;AVGPOST=0.9983;RSQ=0.9966;ERATE=0.0004;THETA=0.0004;AC=1642;AN=2184 GT:DS:GL:BD 0.75183153 1
1 233887490 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1494;AVGPOST=0.9979;RSQ=0.9933;ERATE=0.0005;THETA=0.0001;AC=325;AN=2184 GT:DS:GL:BD 0.14880952 0
1 233887714 . CA C 200 PASS INDEL;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0029;AVGPOST=0.9951;RSQ=0.4680;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233887764 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9466;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233887778 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1524;AVGPOST=0.9993;RSQ=0.9974;ERATE=0.0003;THETA=0.0003;AC=334;AN=2184 GT:DS:GL:BD 0.15293041 0
1 233887888 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0075;AVGPOST=0.9995;RSQ=0.9708;ERATE=0.0004;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 233887989 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.3025;AVGPOST=0.9983;RSQ=0.9968;ERATE=0.0005;THETA=0.0003;AC=661;AN=2184 GT:DS:GL:BD 0.30265567 0
1 233888004 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9545;ERATE=0.0002;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233888035 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5055;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233888049 rs34946828 GA G 16866 PASS INDEL;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.2074;AVGPOST=0.9963;RSQ=0.9913;ERATE=0.0007;THETA=0.0005;AC=453;AN=2184 GT:DS:GL:BD 0.20741758 0
1 233888054 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1529;AVGPOST=0.9993;RSQ=0.9978;ERATE=0.0003;THETA=0.0002;AC=334;AN=2184 GT:DS:GL:BD 0.15293041 0
1 233888071 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7621;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233888084 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0052;AVGPOST=0.9995;RSQ=0.9543;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 233888086 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5442;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233888172 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6913;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233888213 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6899;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233888319 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.789;LDAF=0.0032;AVGPOST=0.9985;RSQ=0.8208;ERATE=0.0006;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233888411 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5636;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233888417 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0025;AVGPOST=0.9988;RSQ=0.7801;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233888486 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4647;AVGPOST=0.9989;RSQ=0.9981;ERATE=0.0003;THETA=0.0004;AC=1016;AN=2184 GT:DS:GL:BD 0.46520147 0
1 233888532 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5465;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233888583 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233888671 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0127;AVGPOST=0.9991;RSQ=0.9685;ERATE=0.0004;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 233888808 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9403;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233888826 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0015;AVGPOST=0.9993;RSQ=0.7971;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233888837 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0029;AVGPOST=0.9992;RSQ=0.9041;ERATE=0.0002;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233888866 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0045;AVGPOST=0.9979;RSQ=0.8322;ERATE=0.0002;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 233888886 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.786;LDAF=0.0029;AVGPOST=0.9988;RSQ=0.8087;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233888897 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.3966;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233889070 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.806;LDAF=0.0060;AVGPOST=0.9967;RSQ=0.8102;ERATE=0.0004;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 233889085 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0017;AVGPOST=0.9973;RSQ=0.3649;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233889164 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1535;AVGPOST=0.9989;RSQ=0.9962;ERATE=0.0004;THETA=0.0005;AC=336;AN=2184 GT:DS:GL:BD 0.15384616 0
1 233889413 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.778;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.6224;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233889444 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0170;AVGPOST=0.9972;RSQ=0.9398;ERATE=0.0004;THETA=0.0010;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 233889488 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3022;AVGPOST=0.9984;RSQ=0.9970;ERATE=0.0004;THETA=0.0002;AC=660;AN=2184 GT:DS:GL:BD 0.30219781 0
1 233889770 . T TA 36 PASS INDEL;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5249;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233889855 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6700;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233890017 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.691;LDAF=0.0029;AVGPOST=0.9985;RSQ=0.8054;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233890128 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233890215 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.674;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8105;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233890236 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.755;LDAF=0.0033;AVGPOST=0.9985;RSQ=0.8079;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233890366 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2944;AVGPOST=0.9975;RSQ=0.9951;ERATE=0.0005;THETA=0.0003;AC=644;AN=2184 GT:DS:GL:BD 0.29487181 0
1 233890382 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0107;AVGPOST=0.9952;RSQ=0.8400;ERATE=0.0008;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 233890383 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.763;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.7698;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233890739 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1539;AVGPOST=0.9991;RSQ=0.9967;ERATE=0.0004;THETA=0.0004;AC=336;AN=2184 GT:DS:GL:BD 0.15384616 0
1 233890783 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233890836 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233890851 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1549;AVGPOST=0.9984;RSQ=0.9944;ERATE=0.0007;THETA=0.0001;AC=338;AN=2184 GT:DS:GL:BD 0.15476191 0
1 233890875 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1545;AVGPOST=0.9984;RSQ=0.9947;ERATE=0.0004;THETA=0.0003;AC=338;AN=2184 GT:DS:GL:BD 0.15476191 0
1 233891073 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0036;AVGPOST=0.9989;RSQ=0.8605;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233891212 . T TG 17 PASS INDEL;BAVGPOST=1.000;BRSQ=0.672;LDAF=0.0027;AVGPOST=0.9970;RSQ=0.5305;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233891268 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0143;AVGPOST=0.9968;RSQ=0.9263;ERATE=0.0004;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 233891354 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4468;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233891459 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.986;LDAF=0.1574;AVGPOST=0.9926;RSQ=0.9792;ERATE=0.0006;THETA=0.0005;AC=344;AN=2184 GT:DS:GL:BD 0.15750916 0
1 233891467 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0024;AVGPOST=0.9959;RSQ=0.4050;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233891682 . AC A 56 PASS INDEL;BAVGPOST=0.998;BRSQ=0.898;LDAF=0.0130;AVGPOST=0.9978;RSQ=0.9330;ERATE=0.0003;THETA=0.0002;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 233891683 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0152;AVGPOST=0.9979;RSQ=0.9432;ERATE=0.0004;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 233891747 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6494;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233891831 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.922;LDAF=0.0038;AVGPOST=0.9989;RSQ=0.9062;ERATE=0.0002;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233891851 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233891868 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9236;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233891878 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1540;AVGPOST=0.9987;RSQ=0.9954;ERATE=0.0004;THETA=0.0003;AC=336;AN=2184 GT:DS:GL:BD 0.15384616 0
1 233892213 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233892461 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7496;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233892486 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2577;AVGPOST=0.9982;RSQ=0.9958;ERATE=0.0005;THETA=0.0004;AC=562;AN=2184 GT:DS:GL:BD 0.25732601 0
1 233892647 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7517;AVGPOST=0.9989;RSQ=0.9976;ERATE=0.0004;THETA=0.0003;AC=1643;AN=2184 GT:DS:GL:BD 0.75228935 1
1 233892778 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1537;AVGPOST=0.9993;RSQ=0.9976;ERATE=0.0004;THETA=0.0002;AC=336;AN=2184 GT:DS:GL:BD 0.15384616 0
1 233892816 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.777;LDAF=0.0059;AVGPOST=0.9997;RSQ=0.9783;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 233892882 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7099;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233892885 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0029;AVGPOST=0.9987;RSQ=0.8420;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233892996 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6469;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233893014 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0089;AVGPOST=0.9995;RSQ=0.9791;ERATE=0.0002;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 233893051 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.938;LDAF=0.0324;AVGPOST=0.9943;RSQ=0.9433;ERATE=0.0004;THETA=0.0005;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 233893329 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3021;AVGPOST=0.9991;RSQ=0.9982;ERATE=0.0003;THETA=0.0002;AC=660;AN=2184 GT:DS:GL:BD 0.30219781 0
1 233893338 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0180;AVGPOST=0.9995;RSQ=0.9888;ERATE=0.0002;THETA=0.0005;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 233893359 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233893415 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7149;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233893437 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0066;AVGPOST=0.9994;RSQ=0.9657;ERATE=0.0002;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 233893453 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0073;AVGPOST=0.9991;RSQ=0.9509;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 233893454 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1540;AVGPOST=0.9990;RSQ=0.9972;ERATE=0.0003;THETA=0.0004;AC=337;AN=2184 GT:DS:GL:BD 0.15430403 0
1 233893550 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0125;AVGPOST=0.9995;RSQ=0.9846;ERATE=0.0003;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 233893653 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0324;AVGPOST=0.9982;RSQ=0.9763;ERATE=0.0003;THETA=0.0003;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 233893839 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6962;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233893934 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.746;LDAF=0.0029;AVGPOST=0.9980;RSQ=0.7709;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233894030 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0144;AVGPOST=0.9995;RSQ=0.9855;ERATE=0.0003;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 233894328 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.5070;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233894346 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233894464 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6131;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233894589 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233894607 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0052;AVGPOST=0.9984;RSQ=0.8737;ERATE=0.0002;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 233894631 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.760;LDAF=0.0026;AVGPOST=0.9988;RSQ=0.8119;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233894701 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.904;LDAF=0.1515;AVGPOST=0.9952;RSQ=0.9833;ERATE=0.0004;THETA=0.0004;AC=336;AN=2184 GT:DS:GL:BD 0.15384616 0
1 233894872 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.770;LDAF=0.0061;AVGPOST=0.9934;RSQ=0.6078;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233894924 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.666;LDAF=0.0035;AVGPOST=0.9959;RSQ=0.5283;ERATE=0.0008;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233895026 rs35822360 A AT 1745 PASS INDEL;BAVGPOST=0.958;BRSQ=0.823;LDAF=0.1408;AVGPOST=0.9835;RSQ=0.9454;ERATE=0.0005;THETA=0.0005;AC=317;AN=2184 GT:DS:GL:BD 0.14514652 0
1 233895089 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1545;AVGPOST=0.9981;RSQ=0.9947;ERATE=0.0005;THETA=0.0007;AC=338;AN=2184 GT:DS:GL:BD 0.15476191 0
1 233895242 . C CA 212 PASS INDEL;BAVGPOST=0.999;BRSQ=0.493;LDAF=0.0037;AVGPOST=0.9935;RSQ=0.3216;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233895290 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.894;LDAF=0.0193;AVGPOST=0.9959;RSQ=0.9184;ERATE=0.0003;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 233895488 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7516;AVGPOST=0.9982;RSQ=0.9960;ERATE=0.0004;THETA=0.0002;AC=1643;AN=2184 GT:DS:GL:BD 0.75228935 1
1 233895528 . AAGT A 8780 PASS INDEL;BAVGPOST=0.983;BRSQ=0.929;LDAF=0.1540;AVGPOST=0.9947;RSQ=0.9833;ERATE=0.0009;THETA=0.0009;AC=337;AN=2184 GT:DS:GL:BD 0.15430403 0
1 233895623 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0070;AVGPOST=0.9992;RSQ=0.9519;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 233895630 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1552;AVGPOST=0.9974;RSQ=0.9925;ERATE=0.0003;THETA=0.0004;AC=337;AN=2184 GT:DS:GL:BD 0.15430403 0
1 233895656 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0087;AVGPOST=0.9996;RSQ=0.9788;ERATE=0.0003;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 233895680 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233895684 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4492;AVGPOST=0.9991;RSQ=0.9985;ERATE=0.0003;THETA=0.0005;AC=982;AN=2184 GT:DS:GL:BD 0.44963369 0
1 233895689 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9385;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233895698 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9474;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233895735 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.7430;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233895758 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0067;AVGPOST=0.9995;RSQ=0.9769;ERATE=0.0002;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 233895862 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1538;AVGPOST=0.9994;RSQ=0.9979;ERATE=0.0003;THETA=0.0003;AC=336;AN=2184 GT:DS:GL:BD 0.15384616 0
1 233895915 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233896059 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233896060 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7608;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233896145 . TTC T 120 PASS INDEL;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0137;AVGPOST=0.9985;RSQ=0.9596;ERATE=0.0003;THETA=0.0027;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 233896146 . TCTC T 2525 PASS INDEL;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0142;AVGPOST=0.9989;RSQ=0.9690;ERATE=0.0004;THETA=0.0002;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 233896156 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6997;ERATE=0.0002;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233896319 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233896324 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0045;AVGPOST=0.9981;RSQ=0.8440;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 233896334 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9047;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233896345 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233896472 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.775;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6133;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233896518 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0070;AVGPOST=0.9997;RSQ=0.9790;ERATE=0.0003;THETA=0.0010;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 233896578 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.9127;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233896774 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.885;LDAF=0.0241;AVGPOST=0.9980;RSQ=0.9679;ERATE=0.0003;THETA=0.0011;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 233897049 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1552;AVGPOST=0.9977;RSQ=0.9920;ERATE=0.0007;THETA=0.0006;AC=339;AN=2184 GT:DS:GL:BD 0.15521978 0
1 233897142 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0078;AVGPOST=0.9989;RSQ=0.9373;ERATE=0.0005;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 233897250 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7311;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233897291 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2860;AVGPOST=0.9960;RSQ=0.9926;ERATE=0.0008;THETA=0.0003;AC=626;AN=2184 GT:DS:GL:BD 0.28663003 0
1 233897400 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1634;AVGPOST=0.9989;RSQ=0.9962;ERATE=0.0005;THETA=0.0005;AC=357;AN=2184 GT:DS:GL:BD 0.16346154 0
1 233897525 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8208;ERATE=0.0004;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233897536 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.1546;AVGPOST=0.9985;RSQ=0.9949;ERATE=0.0005;THETA=0.0008;AC=338;AN=2184 GT:DS:GL:BD 0.15476191 0
1 233897786 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.743;LDAF=0.0021;AVGPOST=0.9973;RSQ=0.4890;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233897810 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.4641;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233897902 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6466;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233897978 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0082;AVGPOST=0.9984;RSQ=0.9261;ERATE=0.0003;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 233897986 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.900;LDAF=0.0183;AVGPOST=0.9970;RSQ=0.9356;ERATE=0.0004;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 233898016 . AT A 131 PASS INDEL;BAVGPOST=1.000;BRSQ=0.721;LDAF=0.0033;AVGPOST=0.9946;RSQ=0.4033;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233898055 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5670;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233898160 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6705;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233898317 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.691;LDAF=0.0039;AVGPOST=0.9958;RSQ=0.6008;ERATE=0.0005;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233898493 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.806;LDAF=0.0094;AVGPOST=0.9967;RSQ=0.8605;ERATE=0.0005;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 233898530 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6651;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233898545 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0129;AVGPOST=0.9988;RSQ=0.9666;ERATE=0.0004;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 233898549 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0017;AVGPOST=0.9979;RSQ=0.5765;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233898566 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5441;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233898584 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.969;LDAF=0.1536;AVGPOST=0.9959;RSQ=0.9885;ERATE=0.0003;THETA=0.0005;AC=334;AN=2184 GT:DS:GL:BD 0.15293041 0
1 233898589 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.969;LDAF=0.1523;AVGPOST=0.9965;RSQ=0.9900;ERATE=0.0003;THETA=0.0004;AC=333;AN=2184 GT:DS:GL:BD 0.15247253 0
1 233898598 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0062;AVGPOST=0.9965;RSQ=0.8331;ERATE=0.0004;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 233898611 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0034;AVGPOST=0.9997;RSQ=0.9613;ERATE=0.0002;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233898835 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2415;AVGPOST=0.9986;RSQ=0.9965;ERATE=0.0004;THETA=0.0008;AC=528;AN=2184 GT:DS:GL:BD 0.24175824 0
1 233898837 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7273;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233898859 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7118;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233898931 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4967;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233899008 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.792;LDAF=0.0043;AVGPOST=0.9984;RSQ=0.8407;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233899124 rs56836178 GA G 82 PASS INDEL;BAVGPOST=0.999;BRSQ=0.734;LDAF=0.0043;AVGPOST=0.9961;RSQ=0.6726;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233899254 . TTAATG T 233 PASS INDEL;BAVGPOST=1.000;BRSQ=0.775;LDAF=0.0017;AVGPOST=0.9987;RSQ=0.6996;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233899295 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.518;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4525;ERATE=0.0006;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233899326 . TA T 437 PASS INDEL;BAVGPOST=0.991;BRSQ=0.778;LDAF=0.0216;AVGPOST=0.9897;RSQ=0.8155;ERATE=0.0008;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 233899454 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1535;AVGPOST=0.9996;RSQ=0.9986;ERATE=0.0003;THETA=0.0004;AC=336;AN=2184 GT:DS:GL:BD 0.15384616 0
1 233899455 rs11373715 G GT 1314 PASS INDEL;BAVGPOST=0.994;BRSQ=0.878;LDAF=0.0307;AVGPOST=0.9807;RSQ=0.7706;ERATE=0.0027;THETA=0.0006;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 233899548 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0076;AVGPOST=0.9993;RSQ=0.9569;ERATE=0.0004;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 233899558 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5490;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233899659 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1627;AVGPOST=0.9997;RSQ=0.9989;ERATE=0.0002;THETA=0.0004;AC=356;AN=2184 GT:DS:GL:BD 0.16300367 0
1 233899774 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0021;AVGPOST=0.9977;RSQ=0.6693;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233899778 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4493;AVGPOST=0.9981;RSQ=0.9968;ERATE=0.0006;THETA=0.0005;AC=982;AN=2184 GT:DS:GL:BD 0.44963369 0
1 233899871 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233900004 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.828;LDAF=0.0143;AVGPOST=0.9968;RSQ=0.9083;ERATE=0.0004;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 233900042 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.8986;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233900050 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1543;AVGPOST=0.9963;RSQ=0.9878;ERATE=0.0007;THETA=0.0003;AC=337;AN=2184 GT:DS:GL:BD 0.15430403 0
1 233900105 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.941;LDAF=0.1691;AVGPOST=0.9680;RSQ=0.9089;ERATE=0.0064;THETA=0.0005;AC=355;AN=2184 GT:DS:GL:BD 0.16254579 0
1 233900134 . A AAT 116 PASS INDEL;BAVGPOST=0.998;BRSQ=0.816;LDAF=0.0146;AVGPOST=0.9854;RSQ=0.6004;ERATE=0.0041;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 233900162 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0184;AVGPOST=0.9992;RSQ=0.9819;ERATE=0.0004;THETA=0.0005;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 233900400 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1533;AVGPOST=0.9989;RSQ=0.9960;ERATE=0.0004;THETA=0.0002;AC=336;AN=2184 GT:DS:GL:BD 0.15384616 0
1 233900403 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0097;AVGPOST=0.9998;RSQ=0.9909;ERATE=0.0002;THETA=0.0007;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 233900423 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8664;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233900456 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233900561 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0125;AVGPOST=0.9997;RSQ=0.9900;ERATE=0.0003;THETA=0.0002;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 233900631 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7338;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233900658 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.731;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.3940;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233900724 . G GTGTCTGT 3743 PASS INDEL;BAVGPOST=0.998;BRSQ=0.962;LDAF=0.0197;AVGPOST=0.9984;RSQ=0.9668;ERATE=0.0006;THETA=0.0004;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 233900908 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233900966 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.810;LDAF=0.0029;AVGPOST=0.9987;RSQ=0.8468;ERATE=0.0002;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233900993 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.801;LDAF=0.0078;AVGPOST=0.9976;RSQ=0.8820;ERATE=0.0004;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 233901069 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.482;LDAF=0.0024;AVGPOST=0.9961;RSQ=0.3787;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233901151 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.963;LDAF=0.4420;AVGPOST=0.9873;RSQ=0.9826;ERATE=0.0008;THETA=0.0007;AC=966;AN=2184 GT:DS:GL:BD 0.44230768 0
1 233901283 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0071;AVGPOST=0.9995;RSQ=0.9689;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 233901405 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.953;LDAF=0.4449;AVGPOST=0.9920;RSQ=0.9875;ERATE=0.0011;THETA=0.0005;AC=977;AN=2184 GT:DS:GL:BD 0.44734433 0
1 233901581 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.651;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.7752;ERATE=0.0004;THETA=0.0028;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233901737 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5515;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233902141 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233902175 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9555;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233902183 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.4489;AVGPOST=0.9984;RSQ=0.9974;ERATE=0.0005;THETA=0.0004;AC=982;AN=2184 GT:DS:GL:BD 0.44963369 0
1 233902238 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7723;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233902263 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233902314 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8974;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233902358 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0045;AVGPOST=0.9977;RSQ=0.7824;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233902490 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7838;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233902500 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.812;LDAF=0.0130;AVGPOST=0.9966;RSQ=0.9100;ERATE=0.0003;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 233902524 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5736;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233902652 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.752;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5968;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233902657 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8730;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233902707 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4989;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233902746 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.972;LDAF=0.2536;AVGPOST=0.9859;RSQ=0.9753;ERATE=0.0007;THETA=0.0004;AC=555;AN=2184 GT:DS:GL:BD 0.25412089 0
1 233902788 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2692;AVGPOST=0.9977;RSQ=0.9950;ERATE=0.0006;THETA=0.0004;AC=587;AN=2184 GT:DS:GL:BD 0.26877290 0
1 233902960 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.971;LDAF=0.4416;AVGPOST=0.9916;RSQ=0.9882;ERATE=0.0005;THETA=0.0023;AC=968;AN=2184 GT:DS:GL:BD 0.44322345 0
1 233902983 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.921;LDAF=0.1445;AVGPOST=0.9904;RSQ=0.9710;ERATE=0.0003;THETA=0.0004;AC=322;AN=2184 GT:DS:GL:BD 0.14743590 0
1 233903019 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1530;AVGPOST=0.9983;RSQ=0.9950;ERATE=0.0003;THETA=0.0007;AC=335;AN=2184 GT:DS:GL:BD 0.15338828 0
1 233903105 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0026;AVGPOST=0.9984;RSQ=0.7469;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233903283 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0173;AVGPOST=0.9995;RSQ=0.9885;ERATE=0.0003;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 233903355 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6902;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233903379 . T TTGGGG 167 PASS INDEL;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9090;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233903383 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.725;LDAF=0.0019;AVGPOST=0.9969;RSQ=0.5045;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233903428 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233903714 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0050;AVGPOST=0.9977;RSQ=0.8499;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 233903834 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0143;AVGPOST=0.9998;RSQ=0.9941;ERATE=0.0003;THETA=0.0014;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 233903968 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.795;LDAF=0.0040;AVGPOST=0.9973;RSQ=0.7198;ERATE=0.0010;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233903995 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.880;LDAF=0.1142;AVGPOST=0.9718;RSQ=0.9026;ERATE=0.0004;THETA=0.0007;AC=249;AN=2184 GT:DS:GL:BD 0.11401099 0
1 233903997 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.880;LDAF=0.1152;AVGPOST=0.9720;RSQ=0.9038;ERATE=0.0003;THETA=0.0003;AC=251;AN=2184 GT:DS:GL:BD 0.11492674 0
1 233904020 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.850;LDAF=0.0160;AVGPOST=0.9970;RSQ=0.9277;ERATE=0.0004;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 233904026 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233904270 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0029;AVGPOST=0.9970;RSQ=0.6086;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233904307 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0064;AVGPOST=0.9968;RSQ=0.7815;ERATE=0.0004;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 233904328 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4946;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233904515 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.658;LDAF=0.0026;AVGPOST=0.9979;RSQ=0.6653;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233904572 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.638;LDAF=0.0081;AVGPOST=0.9933;RSQ=0.6600;ERATE=0.0005;THETA=0.0011;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 233904582 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.566;LDAF=0.0039;AVGPOST=0.9984;RSQ=0.8459;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233904672 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.979;LDAF=0.4023;AVGPOST=0.9894;RSQ=0.9845;ERATE=0.0017;THETA=0.0003;AC=879;AN=2184 GT:DS:GL:BD 0.40247253 0
1 233904716 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7508;AVGPOST=0.9963;RSQ=0.9923;ERATE=0.0003;THETA=0.0005;AC=1640;AN=2184 GT:DS:GL:BD 0.75091577 1
1 233904778 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233904789 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0087;AVGPOST=0.9996;RSQ=0.9823;ERATE=0.0002;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 233904863 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.948;LDAF=0.0167;AVGPOST=0.9992;RSQ=0.9833;ERATE=0.0002;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 233904880 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0143;AVGPOST=0.9997;RSQ=0.9898;ERATE=0.0003;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 233904940 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0065;AVGPOST=0.9989;RSQ=0.9311;ERATE=0.0002;THETA=0.0021;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 233904942 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.835;LDAF=0.0019;AVGPOST=0.9992;RSQ=0.8250;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233904951 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0090;AVGPOST=0.9984;RSQ=0.9329;ERATE=0.0004;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 233904974 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9554;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233905000 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0002;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233905103 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.679;LDAF=0.0042;AVGPOST=0.9964;RSQ=0.6553;ERATE=0.0004;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233905141 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.918;LDAF=0.0128;AVGPOST=0.9980;RSQ=0.9287;ERATE=0.0005;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 233905173 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5746;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233905208 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0175;AVGPOST=0.9996;RSQ=0.9895;ERATE=0.0004;THETA=0.0005;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 233905232 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233905292 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1527;AVGPOST=0.9968;RSQ=0.9899;ERATE=0.0003;THETA=0.0006;AC=335;AN=2184 GT:DS:GL:BD 0.15338828 0
1 233905341 rs34831352 TC T 63213 PASS INDEL;BAVGPOST=0.974;BRSQ=0.554;LDAF=0.9547;AVGPOST=0.9543;RSQ=0.5800;ERATE=0.0087;THETA=0.0007;AC=2117;AN=2184 GT:DS:GL:BD 0.96932232 1
1 233905527 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0098;AVGPOST=0.9977;RSQ=0.9100;ERATE=0.0006;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 233905540 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0097;AVGPOST=0.9978;RSQ=0.9066;ERATE=0.0004;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 233905562 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.675;LDAF=0.0021;AVGPOST=0.9967;RSQ=0.4695;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233905608 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0178;AVGPOST=0.9991;RSQ=0.9809;ERATE=0.0003;THETA=0.0006;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 233905632 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.817;LDAF=0.0171;AVGPOST=0.9926;RSQ=0.8667;ERATE=0.0004;THETA=0.0023;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 233905654 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.997;LDAF=0.4491;AVGPOST=0.9952;RSQ=0.9930;ERATE=0.0005;THETA=0.0002;AC=980;AN=2184 GT:DS:GL:BD 0.44871795 0
1 233905659 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4400;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233905660 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.812;LDAF=0.0034;AVGPOST=0.9987;RSQ=0.8456;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233905727 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.972;LDAF=0.1531;AVGPOST=0.9979;RSQ=0.9928;ERATE=0.0004;THETA=0.0003;AC=336;AN=2184 GT:DS:GL:BD 0.15384616 0
1 233905731 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.941;LDAF=0.1315;AVGPOST=0.9954;RSQ=0.9850;ERATE=0.0002;THETA=0.0002;AC=289;AN=2184 GT:DS:GL:BD 0.13232601 0
1 233905770 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.813;LDAF=0.0013;AVGPOST=0.9997;RSQ=0.8972;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233905788 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0070;AVGPOST=0.9997;RSQ=0.9780;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 233905850 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6035;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233905910 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4928;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233906003 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0057;AVGPOST=0.9996;RSQ=0.9694;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 233906021 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.832;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.7877;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233906036 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7739;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233906055 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0055;AVGPOST=0.9999;RSQ=0.9880;ERATE=0.0002;THETA=0.0010;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 233906060 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233906092 . T TA 175 PASS INDEL;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9212;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233906177 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7344;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233906285 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6340;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233906376 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.602;LDAF=0.0026;AVGPOST=0.9967;RSQ=0.5094;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233906427 . AT A 5162 PASS INDEL;BAVGPOST=0.997;BRSQ=0.956;LDAF=0.0310;AVGPOST=0.9964;RSQ=0.9517;ERATE=0.0004;THETA=0.0003;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 233906464 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.862;LDAF=0.0086;AVGPOST=0.9968;RSQ=0.8649;ERATE=0.0002;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 233906516 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1537;AVGPOST=0.9993;RSQ=0.9973;ERATE=0.0004;THETA=0.0005;AC=336;AN=2184 GT:DS:GL:BD 0.15384616 0
1 233906722 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0021;AVGPOST=0.9990;RSQ=0.8440;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233906819 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9394;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233906848 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0070;AVGPOST=0.9996;RSQ=0.9763;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 233906869 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.718;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5424;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233906876 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0024;AVGPOST=0.9965;RSQ=0.4761;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233906954 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233907010 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0020;AVGPOST=0.9969;RSQ=0.4185;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233907033 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4570;AVGPOST=0.9986;RSQ=0.9977;ERATE=0.0004;THETA=0.0004;AC=999;AN=2184 GT:DS:GL:BD 0.45741758 0
1 233907035 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7452;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233907260 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233907313 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7109;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233907434 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.922;LDAF=0.0114;AVGPOST=0.9991;RSQ=0.9632;ERATE=0.0003;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 233907509 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0022;AVGPOST=0.9972;RSQ=0.5853;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233907604 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5831;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233907686 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.900;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8464;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233907753 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0056;AVGPOST=0.9999;RSQ=0.9881;ERATE=0.0002;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 233907776 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1540;AVGPOST=0.9993;RSQ=0.9975;ERATE=0.0003;THETA=0.0004;AC=337;AN=2184 GT:DS:GL:BD 0.15430403 0
1 233907822 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4489;AVGPOST=0.9979;RSQ=0.9969;ERATE=0.0005;THETA=0.0008;AC=983;AN=2184 GT:DS:GL:BD 0.45009157 0
1 233907842 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6072;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233907859 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0143;AVGPOST=0.9998;RSQ=0.9927;ERATE=0.0003;THETA=0.0007;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 233908009 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5709;ERATE=0.0006;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233908020 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.6338;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233908199 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1524;AVGPOST=0.9989;RSQ=0.9962;ERATE=0.0004;THETA=0.0003;AC=334;AN=2184 GT:DS:GL:BD 0.15293041 0
1 233908220 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9732;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233908280 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233908337 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0070;AVGPOST=0.9997;RSQ=0.9784;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 233908400 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2488;AVGPOST=0.9983;RSQ=0.9960;ERATE=0.0004;THETA=0.0005;AC=544;AN=2184 GT:DS:GL:BD 0.24908425 0
1 233908401 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0181;AVGPOST=0.9995;RSQ=0.9867;ERATE=0.0003;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 233908402 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9196;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233908429 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233908450 . TCTTC T 210 PASS INDEL;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0031;AVGPOST=0.9984;RSQ=0.7730;ERATE=0.0006;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233908471 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4648;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233908476 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0146;AVGPOST=0.9992;RSQ=0.9774;ERATE=0.0003;THETA=0.0002;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 233908490 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.4639;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233908507 . G GT 426 PASS INDEL;BAVGPOST=0.928;BRSQ=0.481;LDAF=0.0891;AVGPOST=0.9149;RSQ=0.6122;ERATE=0.0111;THETA=0.0003;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 233908515 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.776;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.5735;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233908516 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.946;LDAF=0.1544;AVGPOST=0.9829;RSQ=0.9475;ERATE=0.0048;THETA=0.0004;AC=333;AN=2184 GT:DS:GL:BD 0.15247253 0
1 233908534 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9460;ERATE=0.0002;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233908553 . GTTC G 31 PASS INDEL;BAVGPOST=1.000;BRSQ=0.729;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4657;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233908562 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0023;AVGPOST=0.9982;RSQ=0.6515;ERATE=0.0007;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233908571 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.680;LDAF=0.0065;AVGPOST=0.9984;RSQ=0.8849;ERATE=0.0004;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 233908629 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233908790 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233908916 . AC A 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5805;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233908943 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.4494;AVGPOST=0.9984;RSQ=0.9974;ERATE=0.0004;THETA=0.0003;AC=983;AN=2184 GT:DS:GL:BD 0.45009157 0
1 233908958 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0143;AVGPOST=0.9998;RSQ=0.9927;ERATE=0.0003;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 233908969 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.793;LDAF=0.0040;AVGPOST=0.9989;RSQ=0.8824;ERATE=0.0002;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233908990 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0045;AVGPOST=0.9992;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233909158 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4685;ERATE=0.0007;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233909238 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.2423;AVGPOST=0.9973;RSQ=0.9939;ERATE=0.0005;THETA=0.0006;AC=529;AN=2184 GT:DS:GL:BD 0.24221611 0
1 233909320 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0018;AVGPOST=0.9996;RSQ=0.9081;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233909434 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0181;AVGPOST=0.9988;RSQ=0.9781;ERATE=0.0003;THETA=0.0002;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 233909502 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8034;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233909577 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0177;AVGPOST=0.9991;RSQ=0.9802;ERATE=0.0002;THETA=0.0006;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 233909621 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9999;AVGPOST=0.9998;RSQ=0.0498;ERATE=0.0002;THETA=0.0004;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 233909696 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.851;LDAF=0.0023;AVGPOST=0.9983;RSQ=0.7519;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233909749 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9993;AVGPOST=0.9987;RSQ=0.3250;ERATE=0.0003;THETA=0.0003;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 233909751 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9993;AVGPOST=0.9986;RSQ=0.1989;ERATE=0.0003;THETA=0.0009;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 233909776 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.510;LDAF=0.9938;AVGPOST=0.9904;RSQ=0.4361;ERATE=0.0010;THETA=0.0004;AC=2176;AN=2184 GT:DS:GL:BD 0.99633700 1
1 233909843 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9992;RSQ=0.9041;ERATE=0.0002;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233909893 rs60641995 TGTGTAGTG T 23662 PASS INDEL;BAVGPOST=0.976;BRSQ=0.908;LDAF=0.1468;AVGPOST=0.9844;RSQ=0.9550;ERATE=0.0009;THETA=0.0007;AC=324;AN=2184 GT:DS:GL:BD 0.14835165 0
1 233910002 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9545;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233910506 . AC A 121 PASS INDEL;BAVGPOST=0.970;BRSQ=0.545;LDAF=0.0410;AVGPOST=0.9533;RSQ=0.5557;ERATE=0.0046;THETA=0.0009;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 233910633 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0077;AVGPOST=0.9953;RSQ=0.8115;ERATE=0.0002;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 233910709 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0144;AVGPOST=0.9995;RSQ=0.9856;ERATE=0.0003;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 233910920 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2939;AVGPOST=0.9970;RSQ=0.9945;ERATE=0.0005;THETA=0.0004;AC=643;AN=2184 GT:DS:GL:BD 0.29441392 0
1 233910960 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233910985 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8596;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233911007 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0197;AVGPOST=0.9995;RSQ=0.9879;ERATE=0.0003;THETA=0.0026;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 233911099 . ATT A 74 PASS INDEL;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9244;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233911242 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2488;AVGPOST=0.9988;RSQ=0.9973;ERATE=0.0004;THETA=0.0003;AC=543;AN=2184 GT:DS:GL:BD 0.24862637 0
1 233911250 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0128;AVGPOST=0.9991;RSQ=0.9775;ERATE=0.0004;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 233911255 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=0.9999;RSQ=0.9897;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 233911266 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0065;AVGPOST=0.9997;RSQ=0.9766;ERATE=0.0002;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 233911364 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0064;AVGPOST=0.9988;RSQ=0.9234;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 233911392 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1536;AVGPOST=0.9996;RSQ=0.9987;ERATE=0.0003;THETA=0.0004;AC=336;AN=2184 GT:DS:GL:BD 0.15384616 0
1 233911737 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233911833 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8069;ERATE=0.0007;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233911868 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233911886 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1537;AVGPOST=0.9997;RSQ=0.9989;ERATE=0.0002;THETA=0.0002;AC=336;AN=2184 GT:DS:GL:BD 0.15384616 0
1 233911898 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9711;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233911922 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233911926 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233911969 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0143;AVGPOST=0.9992;RSQ=0.9756;ERATE=0.0003;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 233912055 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0079;AVGPOST=0.9997;RSQ=0.9862;ERATE=0.0002;THETA=0.0032;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 233912217 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.7667;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233912282 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4565;AVGPOST=0.9964;RSQ=0.9950;ERATE=0.0005;THETA=0.0005;AC=997;AN=2184 GT:DS:GL:BD 0.45650184 0
1 233912556 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.793;LDAF=0.0037;AVGPOST=0.9983;RSQ=0.8020;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233912557 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233912750 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0028;AVGPOST=0.9991;RSQ=0.8821;ERATE=0.0002;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233912914 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233912967 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6322;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233913006 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6915;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233913221 rs34102775 AT A 28170 PASS INDEL;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.4599;AVGPOST=0.9963;RSQ=0.9944;ERATE=0.0008;THETA=0.0033;AC=1004;AN=2184 GT:DS:GL:BD 0.45970696 0
1 233913334 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1583;AVGPOST=0.9991;RSQ=0.9973;ERATE=0.0003;THETA=0.0037;AC=347;AN=2184 GT:DS:GL:BD 0.15888278 0
1 233913404 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.932;LDAF=0.0292;AVGPOST=0.9968;RSQ=0.9545;ERATE=0.0003;THETA=0.0004;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 233913418 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0066;AVGPOST=0.9996;RSQ=0.9704;ERATE=0.0003;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 233913530 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233913665 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0099;AVGPOST=0.9976;RSQ=0.9044;ERATE=0.0003;THETA=0.0016;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 233913720 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233913813 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9554;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233913879 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233913881 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0026;AVGPOST=0.9981;RSQ=0.7076;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233913887 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.979;LDAF=0.0372;AVGPOST=0.9980;RSQ=0.9813;ERATE=0.0005;THETA=0.0004;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 233913895 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.850;LDAF=0.0040;AVGPOST=0.9992;RSQ=0.9082;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233913944 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233913957 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.7494;AVGPOST=0.9946;RSQ=0.9891;ERATE=0.0005;THETA=0.0004;AC=1639;AN=2184 GT:DS:GL:BD 0.75045788 1
1 233914036 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.1505;AVGPOST=0.9973;RSQ=0.9919;ERATE=0.0004;THETA=0.0030;AC=328;AN=2184 GT:DS:GL:BD 0.15018316 0
1 233914044 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.773;LDAF=0.0091;AVGPOST=0.9974;RSQ=0.8945;ERATE=0.0004;THETA=0.0008;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 233914052 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233914089 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0080;AVGPOST=0.9996;RSQ=0.9781;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 233914199 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0038;AVGPOST=0.9979;RSQ=0.7851;ERATE=0.0003;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233914300 . T TAA 618 PASS INDEL;BAVGPOST=0.875;BRSQ=0.474;LDAF=0.1813;AVGPOST=0.8361;RSQ=0.5784;ERATE=0.0116;THETA=0.0006;AC=325;AN=2184 GT:DS:GL:BD 0.14880952 0
1 233914310 rs3037205 TA T 31 PASS INDEL;BAVGPOST=0.989;BRSQ=0.330;LDAF=0.0296;AVGPOST=0.9589;RSQ=0.4508;ERATE=0.0035;THETA=0.0009;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 233914358 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.887;LDAF=0.0323;AVGPOST=0.9954;RSQ=0.9427;ERATE=0.0007;THETA=0.0006;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 233914420 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.418;LDAF=0.0126;AVGPOST=0.9841;RSQ=0.4927;ERATE=0.0015;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 233914445 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.613;LDAF=0.0022;AVGPOST=0.9985;RSQ=0.7246;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233914464 rs112456722 A AAT 2030 PASS INDEL;BAVGPOST=0.986;BRSQ=0.844;LDAF=0.0613;AVGPOST=0.9629;RSQ=0.7539;ERATE=0.0034;THETA=0.0007;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 233914495 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0148;AVGPOST=0.9987;RSQ=0.9590;ERATE=0.0006;THETA=0.0019;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 233914506 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0048;AVGPOST=0.9977;RSQ=0.7928;ERATE=0.0006;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233914507 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0071;AVGPOST=0.9969;RSQ=0.8081;ERATE=0.0006;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 233914562 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0025;AVGPOST=0.9982;RSQ=0.7442;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233914600 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.725;LDAF=0.0023;AVGPOST=0.9987;RSQ=0.7539;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233914614 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0133;AVGPOST=0.9986;RSQ=0.9553;ERATE=0.0004;THETA=0.0007;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 233914674 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.4672;AVGPOST=0.9945;RSQ=0.9916;ERATE=0.0007;THETA=0.0005;AC=1022;AN=2184 GT:DS:GL:BD 0.46794870 0
1 233914680 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0185;AVGPOST=0.9982;RSQ=0.9649;ERATE=0.0003;THETA=0.0004;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 233914695 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9375;ERATE=0.0004;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233914806 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6496;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233914862 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8561;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233914939 . TG T 917 PASS INDEL;BAVGPOST=0.997;BRSQ=0.861;LDAF=0.0142;AVGPOST=0.9960;RSQ=0.8877;ERATE=0.0003;THETA=0.0008;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 233914955 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6436;ERATE=0.0004;THETA=0.0040;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233915055 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.945;LDAF=0.0223;AVGPOST=0.9993;RSQ=0.9850;ERATE=0.0004;THETA=0.0005;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 233915291 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0216;AVGPOST=0.9998;RSQ=0.9950;ERATE=0.0002;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 233915411 . GT G 38 PASS INDEL;BAVGPOST=0.999;BRSQ=0.788;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7070;ERATE=0.0007;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233915586 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0168;AVGPOST=0.9979;RSQ=0.9512;ERATE=0.0005;THETA=0.0006;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 233915627 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233915749 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0029;AVGPOST=0.9987;RSQ=0.8413;ERATE=0.0003;THETA=0.0024;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233915870 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.5627;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233915901 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6404;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233916114 . GTTGT G 16558 PASS INDEL;BAVGPOST=0.976;BRSQ=0.919;LDAF=0.1596;AVGPOST=0.9888;RSQ=0.9712;ERATE=0.0004;THETA=0.0013;AC=351;AN=2184 GT:DS:GL:BD 0.16071428 0
1 233916126 . TTTG T 5559 PASS INDEL;BAVGPOST=0.976;BRSQ=0.896;LDAF=0.1468;AVGPOST=0.9735;RSQ=0.9217;ERATE=0.0032;THETA=0.0005;AC=322;AN=2184 GT:DS:GL:BD 0.14743590 0
1 233916164 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7811;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233916186 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0033;AVGPOST=0.9995;RSQ=0.9485;ERATE=0.0002;THETA=0.0011;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233916230 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2148;AVGPOST=0.9973;RSQ=0.9948;ERATE=0.0009;THETA=0.0004;AC=469;AN=2184 GT:DS:GL:BD 0.21474358 0
1 233916262 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.755;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8061;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233916323 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0030;AVGPOST=0.9972;RSQ=0.6721;ERATE=0.0004;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233916398 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6639;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233916417 . A ATTG 69 PASS INDEL;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4718;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233916502 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.835;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9393;ERATE=0.0003;THETA=0.0012;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233916509 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.5750;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233916537 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.848;LDAF=0.0029;AVGPOST=0.9987;RSQ=0.8188;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233916571 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7905;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233916609 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233916896 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233916955 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0038;AVGPOST=0.9991;RSQ=0.9208;ERATE=0.0003;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233917033 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1668;AVGPOST=0.9995;RSQ=0.9982;ERATE=0.0003;THETA=0.0012;AC=365;AN=2184 GT:DS:GL:BD 0.16712454 0
1 233917201 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1906;AVGPOST=0.9995;RSQ=0.9985;ERATE=0.0002;THETA=0.0004;AC=417;AN=2184 GT:DS:GL:BD 0.19093406 0
1 233917211 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.870;LDAF=0.0073;AVGPOST=0.9977;RSQ=0.8754;ERATE=0.0004;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 233917249 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.6636;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233917491 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8399;ERATE=0.0002;THETA=0.0026;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233917583 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0075;AVGPOST=0.9995;RSQ=0.9710;ERATE=0.0004;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 233917658 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.762;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6008;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233917748 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233917748 . T TA 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7608;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233917755 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1499;AVGPOST=0.9999;RSQ=0.9997;ERATE=0.0002;THETA=0.0008;AC=328;AN=2184 GT:DS:GL:BD 0.15018316 0
1 233918005 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233918054 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5218;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233918082 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.7010;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233918128 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.5325;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233918270 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.989;LDAF=0.1838;AVGPOST=0.9984;RSQ=0.9953;ERATE=0.0006;THETA=0.0003;AC=402;AN=2184 GT:DS:GL:BD 0.18406594 0
1 233918278 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.494;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6689;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233918371 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.8005;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233918515 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0076;AVGPOST=0.9994;RSQ=0.9626;ERATE=0.0004;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 233918534 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0030;AVGPOST=0.9985;RSQ=0.7976;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233918641 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.661;LDAF=0.0074;AVGPOST=0.9964;RSQ=0.8094;ERATE=0.0005;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 233918717 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.964;LDAF=0.0323;AVGPOST=0.9964;RSQ=0.9537;ERATE=0.0004;THETA=0.0006;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 233918734 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0135;AVGPOST=0.9996;RSQ=0.9862;ERATE=0.0003;THETA=0.0013;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 233918736 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6070;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233918878 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0017;AVGPOST=0.9986;RSQ=0.6800;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233918956 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1569;AVGPOST=0.9992;RSQ=0.9972;ERATE=0.0004;THETA=0.0004;AC=343;AN=2184 GT:DS:GL:BD 0.15705128 0
1 233918977 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7520;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233919122 . T TA 162 PASS INDEL;BAVGPOST=0.986;BRSQ=0.548;LDAF=0.0321;AVGPOST=0.9582;RSQ=0.4746;ERATE=0.0047;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 233919241 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4872;ERATE=0.0002;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233919260 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1764;AVGPOST=0.9975;RSQ=0.9933;ERATE=0.0005;THETA=0.0006;AC=386;AN=2184 GT:DS:GL:BD 0.17673993 0
1 233919376 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6288;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233919466 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233919534 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0106;AVGPOST=0.9997;RSQ=0.9866;ERATE=0.0003;THETA=0.0009;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 233919735 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7190;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233919758 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1878;AVGPOST=0.9976;RSQ=0.9940;ERATE=0.0005;THETA=0.0029;AC=410;AN=2184 GT:DS:GL:BD 0.18772894 0
1 233919827 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7891;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233919877 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9732;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233919914 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5591;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233919985 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0162;AVGPOST=0.9995;RSQ=0.9871;ERATE=0.0004;THETA=0.0005;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 233920008 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0138;AVGPOST=0.9998;RSQ=0.9935;ERATE=0.0003;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 233920063 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1738;AVGPOST=0.9976;RSQ=0.9939;ERATE=0.0003;THETA=0.0003;AC=379;AN=2184 GT:DS:GL:BD 0.17353480 0
1 233920079 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1719;AVGPOST=0.9993;RSQ=0.9977;ERATE=0.0004;THETA=0.0009;AC=376;AN=2184 GT:DS:GL:BD 0.17216118 0
1 233920086 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0018;AVGPOST=0.9999;RSQ=0.9651;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233920187 . CT C 509 PASS INDEL;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0027;AVGPOST=0.9993;RSQ=0.9093;ERATE=0.0002;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233920228 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9649;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233920250 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1719;AVGPOST=0.9989;RSQ=0.9974;ERATE=0.0003;THETA=0.0005;AC=377;AN=2184 GT:DS:GL:BD 0.17261904 0
1 233920303 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7986;ERATE=0.0002;THETA=0.0022;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233920464 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5589;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233920465 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1719;AVGPOST=0.9982;RSQ=0.9955;ERATE=0.0004;THETA=0.0003;AC=376;AN=2184 GT:DS:GL:BD 0.17216118 0
1 233920472 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8756;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233920494 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.988;LDAF=0.1729;AVGPOST=0.9976;RSQ=0.9937;ERATE=0.0005;THETA=0.0004;AC=378;AN=2184 GT:DS:GL:BD 0.17307693 0
1 233920527 . C CT 1592 PASS INDEL;BAVGPOST=0.981;BRSQ=0.931;LDAF=0.1659;AVGPOST=0.9898;RSQ=0.9730;ERATE=0.0004;THETA=0.0008;AC=366;AN=2184 GT:DS:GL:BD 0.16758242 0
1 233920529 rs35882150 T TA 16125 PASS INDEL;BAVGPOST=0.983;BRSQ=0.941;LDAF=0.1715;AVGPOST=0.9981;RSQ=0.9954;ERATE=0.0003;THETA=0.0022;AC=375;AN=2184 GT:DS:GL:BD 0.17170329 0
1 233920701 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1725;AVGPOST=0.9993;RSQ=0.9976;ERATE=0.0004;THETA=0.0002;AC=377;AN=2184 GT:DS:GL:BD 0.17261904 0
1 233920753 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1724;AVGPOST=0.9995;RSQ=0.9982;ERATE=0.0004;THETA=0.0006;AC=377;AN=2184 GT:DS:GL:BD 0.17261904 0
1 233920764 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0244;AVGPOST=0.9995;RSQ=0.9902;ERATE=0.0003;THETA=0.0005;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 233920804 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1912;AVGPOST=0.9994;RSQ=0.9982;ERATE=0.0003;THETA=0.0005;AC=418;AN=2184 GT:DS:GL:BD 0.19139194 0
1 233920817 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.815;LDAF=0.0092;AVGPOST=0.9982;RSQ=0.9199;ERATE=0.0004;THETA=0.0010;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 233920860 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.776;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8448;ERATE=0.0003;THETA=0.0045;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233920973 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.6411;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233920992 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.966;LDAF=0.1717;AVGPOST=0.9954;RSQ=0.9872;ERATE=0.0008;THETA=0.0009;AC=377;AN=2184 GT:DS:GL:BD 0.17261904 0
1 233921000 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0041;AVGPOST=1.0000;RSQ=0.9947;ERATE=0.0002;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233921030 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1721;AVGPOST=0.9985;RSQ=0.9959;ERATE=0.0004;THETA=0.0048;AC=377;AN=2184 GT:DS:GL:BD 0.17261904 0
1 233921173 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.953;LDAF=0.1657;AVGPOST=0.9926;RSQ=0.9800;ERATE=0.0006;THETA=0.0008;AC=362;AN=2184 GT:DS:GL:BD 0.16575092 0
1 233921187 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.932;LDAF=0.1516;AVGPOST=0.9814;RSQ=0.9488;ERATE=0.0007;THETA=0.0006;AC=327;AN=2184 GT:DS:GL:BD 0.14972527 0
1 233921202 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.920;LDAF=0.1411;AVGPOST=0.9793;RSQ=0.9392;ERATE=0.0005;THETA=0.0004;AC=310;AN=2184 GT:DS:GL:BD 0.14194140 0
1 233921224 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.901;LDAF=0.1342;AVGPOST=0.9754;RSQ=0.9256;ERATE=0.0009;THETA=0.0016;AC=294;AN=2184 GT:DS:GL:BD 0.13461539 0
1 233921243 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.942;LDAF=0.1581;AVGPOST=0.9856;RSQ=0.9622;ERATE=0.0006;THETA=0.0014;AC=347;AN=2184 GT:DS:GL:BD 0.15888278 0
1 233921297 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1701;AVGPOST=0.9968;RSQ=0.9921;ERATE=0.0004;THETA=0.0010;AC=371;AN=2184 GT:DS:GL:BD 0.16987179 0
1 233921414 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0067;AVGPOST=0.9989;RSQ=0.9349;ERATE=0.0002;THETA=0.0017;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 233921419 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6328;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233921545 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0217;AVGPOST=0.9983;RSQ=0.9686;ERATE=0.0005;THETA=0.0008;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 233921546 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.776;LDAF=0.0030;AVGPOST=0.9974;RSQ=0.6963;ERATE=0.0004;THETA=0.0046;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233921648 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.1723;AVGPOST=0.9988;RSQ=0.9963;ERATE=0.0004;THETA=0.0005;AC=376;AN=2184 GT:DS:GL:BD 0.17216118 0
1 233921752 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0218;AVGPOST=0.9985;RSQ=0.9799;ERATE=0.0003;THETA=0.0007;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 233921835 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4607;AVGPOST=0.9963;RSQ=0.9942;ERATE=0.0005;THETA=0.0005;AC=1008;AN=2184 GT:DS:GL:BD 0.46153846 0
1 233921844 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0020;AVGPOST=0.9994;RSQ=0.8629;ERATE=0.0004;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233922071 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.956;BRSQ=0.825;LDAF=0.1506;AVGPOST=0.9738;RSQ=0.9257;ERATE=0.0008;THETA=0.0014;AC=331;AN=2184 GT:DS:GL:BD 0.15155677 0
1 233922076 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.956;BRSQ=0.827;LDAF=0.1489;AVGPOST=0.9769;RSQ=0.9334;ERATE=0.0005;THETA=0.0004;AC=327;AN=2184 GT:DS:GL:BD 0.14972527 0
1 233922084 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0080;AVGPOST=0.9964;RSQ=0.8032;ERATE=0.0006;THETA=0.0019;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 233922158 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0437;AVGPOST=0.9968;RSQ=0.9712;ERATE=0.0005;THETA=0.0004;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 233922167 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.928;LDAF=0.1653;AVGPOST=0.9879;RSQ=0.9688;ERATE=0.0006;THETA=0.0029;AC=361;AN=2184 GT:DS:GL:BD 0.16529304 0
1 233922190 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0065;AVGPOST=0.9978;RSQ=0.8587;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 233922249 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.739;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7946;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233922268 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.996;LDAF=0.2581;AVGPOST=0.9962;RSQ=0.9921;ERATE=0.0006;THETA=0.0004;AC=563;AN=2184 GT:DS:GL:BD 0.25778389 0
1 233922316 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.7383;AVGPOST=0.9941;RSQ=0.9884;ERATE=0.0007;THETA=0.0007;AC=1613;AN=2184 GT:DS:GL:BD 0.73855311 1
1 233922430 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.974;LDAF=0.0295;AVGPOST=0.9973;RSQ=0.9680;ERATE=0.0004;THETA=0.0004;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 233922504 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0107;AVGPOST=0.9981;RSQ=0.9274;ERATE=0.0003;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 233922530 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6493;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233922544 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.982;LDAF=0.1707;AVGPOST=0.9981;RSQ=0.9945;ERATE=0.0003;THETA=0.0004;AC=375;AN=2184 GT:DS:GL:BD 0.17170329 0
1 233922640 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.937;LDAF=0.1641;AVGPOST=0.9853;RSQ=0.9600;ERATE=0.0012;THETA=0.0004;AC=360;AN=2184 GT:DS:GL:BD 0.16483517 0
1 233922641 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.939;LDAF=0.1619;AVGPOST=0.9894;RSQ=0.9701;ERATE=0.0004;THETA=0.0002;AC=353;AN=2184 GT:DS:GL:BD 0.16163003 0
1 233922653 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.845;LDAF=0.0043;AVGPOST=0.9973;RSQ=0.7606;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233922872 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.978;LDAF=0.0248;AVGPOST=0.9987;RSQ=0.9793;ERATE=0.0003;THETA=0.0006;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 233922878 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.949;LDAF=0.1692;AVGPOST=0.9789;RSQ=0.9398;ERATE=0.0078;THETA=0.0004;AC=361;AN=2184 GT:DS:GL:BD 0.16529304 0
1 233922950 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6963;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233922989 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0138;AVGPOST=0.9997;RSQ=0.9905;ERATE=0.0003;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 233923019 . C CT 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.3951;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233923070 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.974;LDAF=0.4504;AVGPOST=0.9957;RSQ=0.9932;ERATE=0.0006;THETA=0.0005;AC=987;AN=2184 GT:DS:GL:BD 0.45192307 0
1 233923135 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.922;LDAF=0.0146;AVGPOST=0.9963;RSQ=0.9073;ERATE=0.0004;THETA=0.0001;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 233923238 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.779;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6302;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233923306 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.5274;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233923340 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8517;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233923491 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.838;LDAF=0.0222;AVGPOST=0.9966;RSQ=0.9450;ERATE=0.0004;THETA=0.0055;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 233923498 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.3956;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233923536 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.983;LDAF=0.4127;AVGPOST=0.9944;RSQ=0.9912;ERATE=0.0006;THETA=0.0003;AC=907;AN=2184 GT:DS:GL:BD 0.41529304 0
1 233923568 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.4045;AVGPOST=0.9969;RSQ=0.9949;ERATE=0.0008;THETA=0.0006;AC=885;AN=2184 GT:DS:GL:BD 0.40521979 0
1 233923619 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0041;AVGPOST=0.9985;RSQ=0.8628;ERATE=0.0004;THETA=0.0012;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233923652 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7571;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233923707 . A AT 98 PASS INDEL;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4941;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233923766 . TCTTG T 391 PASS INDEL;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.3943;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233923847 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9213;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233923864 . G GT 48 PASS INDEL;BAVGPOST=0.994;BRSQ=0.600;LDAF=0.0114;AVGPOST=0.9889;RSQ=0.6005;ERATE=0.0026;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 233923957 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.955;BRSQ=0.922;LDAF=0.4069;AVGPOST=0.9745;RSQ=0.9659;ERATE=0.0021;THETA=0.0005;AC=892;AN=2184 GT:DS:GL:BD 0.40842491 0
1 233924333 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.974;LDAF=0.0306;AVGPOST=0.9974;RSQ=0.9639;ERATE=0.0002;THETA=0.0056;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 233924390 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4187;AVGPOST=0.9972;RSQ=0.9954;ERATE=0.0005;THETA=0.0007;AC=915;AN=2184 GT:DS:GL:BD 0.41895604 0
1 233924396 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7265;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233924722 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4168;AVGPOST=0.9971;RSQ=0.9955;ERATE=0.0004;THETA=0.0004;AC=911;AN=2184 GT:DS:GL:BD 0.41712454 0
1 233924993 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0022;AVGPOST=0.9991;RSQ=0.8556;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233925171 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.6403;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233925323 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0053;AVGPOST=0.9981;RSQ=0.8436;ERATE=0.0004;THETA=0.0042;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 233925371 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.686;LDAF=0.0023;AVGPOST=0.9965;RSQ=0.4546;ERATE=0.0006;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233925400 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.841;LDAF=0.0093;AVGPOST=0.9945;RSQ=0.7763;ERATE=0.0005;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 233925533 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.932;LDAF=0.1505;AVGPOST=0.9924;RSQ=0.9755;ERATE=0.0011;THETA=0.0009;AC=333;AN=2184 GT:DS:GL:BD 0.15247253 0
1 233925550 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.810;LDAF=0.0038;AVGPOST=0.9979;RSQ=0.7536;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233925566 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.809;LDAF=0.0132;AVGPOST=0.9918;RSQ=0.7732;ERATE=0.0005;THETA=0.0008;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 233925583 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0031;AVGPOST=0.9991;RSQ=0.8653;ERATE=0.0004;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233925615 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5967;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233925759 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233926007 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0147;AVGPOST=0.9991;RSQ=0.9720;ERATE=0.0004;THETA=0.0005;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 233926128 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6105;AVGPOST=0.9958;RSQ=0.9935;ERATE=0.0006;THETA=0.0003;AC=1336;AN=2184 GT:DS:GL:BD 0.61172163 1
1 233926145 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0032;AVGPOST=0.9998;RSQ=0.9734;ERATE=0.0002;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233926149 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9479;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233926313 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.558;LDAF=0.0036;AVGPOST=0.9973;RSQ=0.6969;ERATE=0.0006;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233926342 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0061;AVGPOST=0.9997;RSQ=0.9783;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 233926345 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.689;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5994;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233926510 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7424;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233926513 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0220;AVGPOST=0.9999;RSQ=0.9982;ERATE=0.0002;THETA=0.0004;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 233926563 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1722;AVGPOST=0.9984;RSQ=0.9958;ERATE=0.0004;THETA=0.0020;AC=378;AN=2184 GT:DS:GL:BD 0.17307693 0
1 233926818 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6072;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233926878 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0145;AVGPOST=0.9993;RSQ=0.9848;ERATE=0.0002;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 233926930 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.896;LDAF=0.0095;AVGPOST=0.9984;RSQ=0.9227;ERATE=0.0006;THETA=0.0007;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 233926935 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6415;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233927002 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4615;AVGPOST=0.9985;RSQ=0.9981;ERATE=0.0002;THETA=0.0008;AC=1007;AN=2184 GT:DS:GL:BD 0.46108058 0
1 233927056 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0004;AVGPOST=0.9997;RSQ=0.6674;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233927089 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233927093 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6237;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233927135 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0148;AVGPOST=0.9990;RSQ=0.9715;ERATE=0.0004;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 233927159 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7442;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233927164 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6318;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233927180 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.2621;AVGPOST=0.9985;RSQ=0.9970;ERATE=0.0006;THETA=0.0004;AC=572;AN=2184 GT:DS:GL:BD 0.26190478 0
1 233927236 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.7752;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233927237 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0944;AVGPOST=0.9985;RSQ=0.9935;ERATE=0.0004;THETA=0.0003;AC=204;AN=2184 GT:DS:GL:BD 0.09340660 0
1 233927348 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233927363 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0033;AVGPOST=0.9992;RSQ=0.8997;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233927370 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6123;AVGPOST=0.9996;RSQ=0.9993;ERATE=0.0004;THETA=0.0005;AC=1338;AN=2184 GT:DS:GL:BD 0.61263734 1
1 233927375 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0154;AVGPOST=0.9995;RSQ=0.9887;ERATE=0.0002;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 233927381 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.7737;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233927451 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0015;AVGPOST=0.9981;RSQ=0.5410;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233927492 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6724;ERATE=0.0007;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233927530 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7559;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233927580 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4086;AVGPOST=0.9991;RSQ=0.9985;ERATE=0.0003;THETA=0.0005;AC=892;AN=2184 GT:DS:GL:BD 0.40842491 0
1 233927634 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5643;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233927645 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0189;AVGPOST=0.9989;RSQ=0.9765;ERATE=0.0003;THETA=0.0003;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 233927684 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0215;AVGPOST=0.9991;RSQ=0.9862;ERATE=0.0004;THETA=0.0006;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 233927685 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.0034;AVGPOST=0.9989;RSQ=0.8798;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233927691 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.945;LDAF=0.0115;AVGPOST=0.9991;RSQ=0.9677;ERATE=0.0003;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 233927721 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4103;AVGPOST=0.9961;RSQ=0.9945;ERATE=0.0010;THETA=0.0004;AC=897;AN=2184 GT:DS:GL:BD 0.41071430 0
1 233927868 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0216;AVGPOST=0.9997;RSQ=0.9938;ERATE=0.0004;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 233927909 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0147;AVGPOST=0.9984;RSQ=0.9633;ERATE=0.0003;THETA=0.0042;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 233928182 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0026;AVGPOST=0.9990;RSQ=0.8652;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233928249 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0024;AVGPOST=0.9968;RSQ=0.4874;ERATE=0.0009;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233928267 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.971;LDAF=0.2576;AVGPOST=0.9919;RSQ=0.9857;ERATE=0.0006;THETA=0.0003;AC=566;AN=2184 GT:DS:GL:BD 0.25915751 0
1 233928305 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7068;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233928322 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.570;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6027;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233928331 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.975;LDAF=0.6069;AVGPOST=0.9869;RSQ=0.9800;ERATE=0.0017;THETA=0.0005;AC=1332;AN=2184 GT:DS:GL:BD 0.60989010 1
1 233928373 rs71170443 C CA 388 PASS INDEL;BAVGPOST=0.420;BRSQ=0.074;LDAF=0.6210;AVGPOST=0.6801;RSQ=0.4286;ERATE=0.0122;THETA=0.0006;AC=1405;AN=2184 GT:DS:GL:BD 0.64331502 1
1 233928422 . A ACT 57 PASS INDEL;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7946;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233928430 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.7316;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233928549 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.722;LDAF=0.0283;AVGPOST=0.9768;RSQ=0.6658;ERATE=0.0109;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 233928550 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.987;LDAF=0.6598;AVGPOST=0.9960;RSQ=0.9933;ERATE=0.0005;THETA=0.0005;AC=1441;AN=2184 GT:DS:GL:BD 0.65979856 1
1 233928593 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5554;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233928597 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0031;AVGPOST=0.9985;RSQ=0.8476;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233928628 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1787;AVGPOST=0.9999;RSQ=0.9996;ERATE=0.0002;THETA=0.0002;AC=391;AN=2184 GT:DS:GL:BD 0.17902930 0
1 233928736 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2598;AVGPOST=0.9993;RSQ=0.9987;ERATE=0.0003;THETA=0.0003;AC=567;AN=2184 GT:DS:GL:BD 0.25961539 0
1 233928738 . TC T 1399 PASS INDEL;BAVGPOST=0.995;BRSQ=0.799;LDAF=0.0100;AVGPOST=0.9948;RSQ=0.8052;ERATE=0.0004;THETA=0.0009;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 233928751 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6297;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233928758 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0030;AVGPOST=0.9982;RSQ=0.7735;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233928834 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.1005;AVGPOST=0.9987;RSQ=0.9933;ERATE=0.0004;THETA=0.0003;AC=219;AN=2184 GT:DS:GL:BD 0.10027473 0
1 233928873 rs67114214 A AAT 486 PASS INDEL;BAVGPOST=0.972;BRSQ=0.625;LDAF=0.0424;AVGPOST=0.9777;RSQ=0.8042;ERATE=0.0009;THETA=0.0002;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 233928897 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0143;AVGPOST=0.9998;RSQ=0.9922;ERATE=0.0003;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 233928921 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1647;AVGPOST=0.9994;RSQ=0.9979;ERATE=0.0004;THETA=0.0002;AC=360;AN=2184 GT:DS:GL:BD 0.16483517 0
1 233928989 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.782;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6083;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233929052 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0151;AVGPOST=0.9987;RSQ=0.9713;ERATE=0.0003;THETA=0.0006;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 233929065 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233929086 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0153;AVGPOST=0.9995;RSQ=0.9864;ERATE=0.0003;THETA=0.0002;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 233929120 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4683;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233929141 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2605;AVGPOST=0.9989;RSQ=0.9982;ERATE=0.0003;THETA=0.0002;AC=568;AN=2184 GT:DS:GL:BD 0.26007327 0
1 233929184 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6428;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233929349 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2599;AVGPOST=0.9995;RSQ=0.9989;ERATE=0.0003;THETA=0.0003;AC=568;AN=2184 GT:DS:GL:BD 0.26007327 0
1 233929404 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0142;AVGPOST=0.9999;RSQ=0.9969;ERATE=0.0002;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 233929467 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1793;AVGPOST=0.9984;RSQ=0.9959;ERATE=0.0004;THETA=0.0002;AC=391;AN=2184 GT:DS:GL:BD 0.17902930 0
1 233929491 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0077;AVGPOST=0.9993;RSQ=0.9660;ERATE=0.0002;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 233929495 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.812;LDAF=0.0037;AVGPOST=0.9978;RSQ=0.7598;ERATE=0.0003;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233929507 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1654;AVGPOST=0.9982;RSQ=0.9949;ERATE=0.0004;THETA=0.0007;AC=361;AN=2184 GT:DS:GL:BD 0.16529304 0
1 233929805 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2598;AVGPOST=0.9990;RSQ=0.9982;ERATE=0.0004;THETA=0.0006;AC=568;AN=2184 GT:DS:GL:BD 0.26007327 0
1 233929836 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0144;AVGPOST=0.9996;RSQ=0.9875;ERATE=0.0004;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 233929849 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6136;AVGPOST=0.9974;RSQ=0.9959;ERATE=0.0004;THETA=0.0006;AC=1340;AN=2184 GT:DS:GL:BD 0.61355311 1
1 233929853 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1264;AVGPOST=0.9976;RSQ=0.9919;ERATE=0.0005;THETA=0.0002;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 233929921 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.967;LDAF=0.0144;AVGPOST=0.9995;RSQ=0.9821;ERATE=0.0003;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 233929965 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1645;AVGPOST=0.9995;RSQ=0.9985;ERATE=0.0003;THETA=0.0003;AC=360;AN=2184 GT:DS:GL:BD 0.16483517 0
1 233930029 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0143;AVGPOST=0.9997;RSQ=0.9909;ERATE=0.0002;THETA=0.0016;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 233930037 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233930102 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.726;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7728;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233930103 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5991;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233930151 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.8968;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233930301 . G GA 152 PASS INDEL;BAVGPOST=0.988;BRSQ=0.495;LDAF=0.0208;AVGPOST=0.9745;RSQ=0.4902;ERATE=0.0064;THETA=0.0009;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 233930344 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0226;AVGPOST=0.9986;RSQ=0.9758;ERATE=0.0002;THETA=0.0007;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 233930543 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7117;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233930602 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.785;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8546;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233930627 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6282;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233930679 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0166;AVGPOST=0.9996;RSQ=0.9894;ERATE=0.0003;THETA=0.0007;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 233930680 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8469;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233930706 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.764;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5932;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233930802 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0004;AVGPOST=0.9995;RSQ=0.5552;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233930823 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1642;AVGPOST=0.9992;RSQ=0.9975;ERATE=0.0003;THETA=0.0002;AC=360;AN=2184 GT:DS:GL:BD 0.16483517 0
1 233930867 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0143;AVGPOST=0.9998;RSQ=0.9937;ERATE=0.0002;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 233930963 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.742;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7334;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233931184 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0055;AVGPOST=0.9995;RSQ=0.9537;ERATE=0.0002;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 233931198 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5647;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233931276 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233931336 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7841;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233931560 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1043;AVGPOST=0.9997;RSQ=0.9984;ERATE=0.0002;THETA=0.0007;AC=227;AN=2184 GT:DS:GL:BD 0.10393773 0
1 233931590 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0038;AVGPOST=0.9995;RSQ=0.9448;ERATE=0.0002;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233931758 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8191;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233931777 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0214;AVGPOST=0.9992;RSQ=0.9887;ERATE=0.0002;THETA=0.0004;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 233931893 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0473;AVGPOST=0.9995;RSQ=0.9956;ERATE=0.0002;THETA=0.0003;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 233931981 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0500;ERATE=0.0002;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 233932057 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0142;AVGPOST=0.9999;RSQ=0.9969;ERATE=0.0002;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 233932117 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0426;AVGPOST=0.9993;RSQ=0.9930;ERATE=0.0003;THETA=0.0003;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 233932137 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0194;AVGPOST=0.9980;RSQ=0.9665;ERATE=0.0003;THETA=0.0003;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 233932187 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6012;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233932196 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0142;AVGPOST=0.9999;RSQ=0.9955;ERATE=0.0002;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 233932254 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233932285 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0143;AVGPOST=0.9998;RSQ=0.9939;ERATE=0.0002;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 233932343 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0143;AVGPOST=0.9998;RSQ=0.9937;ERATE=0.0002;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 233932379 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0142;AVGPOST=0.9999;RSQ=0.9968;ERATE=0.0002;THETA=0.0006;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 233932420 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0288;AVGPOST=0.9991;RSQ=0.9858;ERATE=0.0004;THETA=0.0004;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 233932449 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0144;AVGPOST=0.9995;RSQ=0.9846;ERATE=0.0003;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 233932478 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.785;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8472;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233932493 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.5921;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233932681 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0144;AVGPOST=0.9996;RSQ=0.9887;ERATE=0.0002;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 233932718 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5638;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233932807 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4423;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233932817 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0143;AVGPOST=0.9997;RSQ=0.9910;ERATE=0.0003;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 233932911 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0144;AVGPOST=0.9989;RSQ=0.9733;ERATE=0.0002;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 233932940 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0144;AVGPOST=0.9996;RSQ=0.9860;ERATE=0.0004;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 233932951 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8410;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233932967 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0144;AVGPOST=0.9995;RSQ=0.9814;ERATE=0.0003;THETA=0.0002;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 233933014 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1646;AVGPOST=0.9993;RSQ=0.9977;ERATE=0.0004;THETA=0.0005;AC=360;AN=2184 GT:DS:GL:BD 0.16483517 0
1 233933028 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0165;AVGPOST=0.9979;RSQ=0.9479;ERATE=0.0004;THETA=0.0002;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 233933029 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1269;AVGPOST=0.9990;RSQ=0.9966;ERATE=0.0004;THETA=0.0003;AC=277;AN=2184 GT:DS:GL:BD 0.12683150 0
1 233933030 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0146;AVGPOST=0.9990;RSQ=0.9684;ERATE=0.0004;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 233933110 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0022;AVGPOST=0.9995;RSQ=0.9135;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233933174 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0004;AVGPOST=0.9995;RSQ=0.5372;ERATE=0.0003;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 233933291 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8303;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233933316 rs35906636 C CT 7572 PASS INDEL;BAVGPOST=0.959;BRSQ=0.869;LDAF=0.2043;AVGPOST=0.8979;RSQ=0.7523;ERATE=0.0313;THETA=0.0003;AC=390;AN=2184 GT:DS:GL:BD 0.17857143 0
1 233933360 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.989;LDAF=0.1787;AVGPOST=0.9989;RSQ=0.9967;ERATE=0.0004;THETA=0.0004;AC=391;AN=2184 GT:DS:GL:BD 0.17902930 0
1 233933374 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9233;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233933506 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0189;AVGPOST=0.9975;RSQ=0.9504;ERATE=0.0002;THETA=0.0005;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 233933545 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233933546 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0234;AVGPOST=0.9960;RSQ=0.9409;ERATE=0.0008;THETA=0.0005;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 233933641 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0152;AVGPOST=0.9977;RSQ=0.9407;ERATE=0.0003;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 233933793 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7233;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233933803 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0028;AVGPOST=0.9994;RSQ=0.8978;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233933819 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0143;AVGPOST=0.9997;RSQ=0.9906;ERATE=0.0002;THETA=0.0013;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 233933899 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2599;AVGPOST=0.9962;RSQ=0.9924;ERATE=0.0008;THETA=0.0005;AC=568;AN=2184 GT:DS:GL:BD 0.26007327 0
1 233933986 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0144;AVGPOST=0.9996;RSQ=0.9862;ERATE=0.0003;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 233934020 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7513;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233934110 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0142;AVGPOST=1.0000;RSQ=0.9984;ERATE=0.0002;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 233934145 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0142;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0008;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 233934166 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=0.9999;RSQ=0.9781;ERATE=0.0002;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233934170 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7220;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233934171 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9687;ERATE=0.0002;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233934489 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6253;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233934559 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1646;AVGPOST=0.9991;RSQ=0.9972;ERATE=0.0003;THETA=0.0002;AC=360;AN=2184 GT:DS:GL:BD 0.16483517 0
1 233934590 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6234;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233934624 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9895;ERATE=0.0002;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233934669 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.771;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233934689 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0143;AVGPOST=0.9996;RSQ=0.9875;ERATE=0.0002;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 233934691 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.6011;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233934743 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.744;LDAF=0.0058;AVGPOST=0.9984;RSQ=0.8826;ERATE=0.0004;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 233934797 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4978;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233934844 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0153;AVGPOST=0.9982;RSQ=0.9529;ERATE=0.0004;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 233934889 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2054;AVGPOST=0.9984;RSQ=0.9960;ERATE=0.0005;THETA=0.0004;AC=449;AN=2184 GT:DS:GL:BD 0.20558608 0
1 233934969 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.727;LDAF=0.0024;AVGPOST=0.9976;RSQ=0.6661;ERATE=0.0004;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233935052 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0142;AVGPOST=0.9989;RSQ=0.9680;ERATE=0.0004;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 233935057 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8051;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233935146 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.698;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7691;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233935193 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.959;BRSQ=0.918;LDAF=0.2981;AVGPOST=0.9879;RSQ=0.9799;ERATE=0.0007;THETA=0.0006;AC=659;AN=2184 GT:DS:GL:BD 0.30173993 0
1 233935198 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5188;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233935206 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.8175;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233935245 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0039;AVGPOST=0.9989;RSQ=0.8944;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233935269 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2808;AVGPOST=0.9975;RSQ=0.9954;ERATE=0.0008;THETA=0.0002;AC=613;AN=2184 GT:DS:GL:BD 0.28067765 0
1 233935354 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.928;LDAF=0.0214;AVGPOST=0.9987;RSQ=0.9777;ERATE=0.0004;THETA=0.0008;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 233935373 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9066;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233935381 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0210;AVGPOST=0.9980;RSQ=0.9642;ERATE=0.0004;THETA=0.0006;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 233935384 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.995;LDAF=0.4448;AVGPOST=0.9986;RSQ=0.9978;ERATE=0.0003;THETA=0.0004;AC=973;AN=2184 GT:DS:GL:BD 0.44551283 0
1 233935415 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.992;LDAF=0.2583;AVGPOST=0.9962;RSQ=0.9928;ERATE=0.0004;THETA=0.0003;AC=565;AN=2184 GT:DS:GL:BD 0.25869963 0
1 233935425 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0146;AVGPOST=0.9983;RSQ=0.9475;ERATE=0.0005;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 233935467 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.974;LDAF=0.1625;AVGPOST=0.9953;RSQ=0.9869;ERATE=0.0005;THETA=0.0002;AC=357;AN=2184 GT:DS:GL:BD 0.16346154 0
1 233935500 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4587;AVGPOST=0.9986;RSQ=0.9978;ERATE=0.0003;THETA=0.0004;AC=1003;AN=2184 GT:DS:GL:BD 0.45924908 0
1 233935518 . TCA T 180 PASS INDEL;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233935553 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0266;AVGPOST=0.9998;RSQ=0.9969;ERATE=0.0003;THETA=0.0005;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 233935555 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.988;LDAF=0.1050;AVGPOST=0.9970;RSQ=0.9880;ERATE=0.0006;THETA=0.0042;AC=229;AN=2184 GT:DS:GL:BD 0.10485348 0
1 233935648 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.985;LDAF=0.6093;AVGPOST=0.9965;RSQ=0.9942;ERATE=0.0007;THETA=0.0004;AC=1333;AN=2184 GT:DS:GL:BD 0.61034799 1
1 233935699 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.981;LDAF=0.1636;AVGPOST=0.9972;RSQ=0.9924;ERATE=0.0002;THETA=0.0003;AC=359;AN=2184 GT:DS:GL:BD 0.16437729 0
1 233935703 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.979;LDAF=0.1422;AVGPOST=0.9972;RSQ=0.9914;ERATE=0.0002;THETA=0.0006;AC=312;AN=2184 GT:DS:GL:BD 0.14285715 0
1 233935749 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2812;AVGPOST=0.9984;RSQ=0.9974;ERATE=0.0003;THETA=0.0041;AC=613;AN=2184 GT:DS:GL:BD 0.28067765 0
1 233935770 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233935785 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1782;AVGPOST=0.9987;RSQ=0.9965;ERATE=0.0004;THETA=0.0004;AC=390;AN=2184 GT:DS:GL:BD 0.17857143 0
1 233935833 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1630;AVGPOST=0.9976;RSQ=0.9934;ERATE=0.0006;THETA=0.0003;AC=358;AN=2184 GT:DS:GL:BD 0.16391942 0
1 233935914 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0027;AVGPOST=0.9995;RSQ=0.9282;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233935951 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5081;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233936051 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7290;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233936060 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6131;AVGPOST=0.9986;RSQ=0.9976;ERATE=0.0005;THETA=0.0014;AC=1340;AN=2184 GT:DS:GL:BD 0.61355311 1
1 233936067 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1648;AVGPOST=0.9989;RSQ=0.9967;ERATE=0.0002;THETA=0.0004;AC=360;AN=2184 GT:DS:GL:BD 0.16483517 0
1 233936144 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.6215;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233936162 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0136;AVGPOST=0.9989;RSQ=0.9633;ERATE=0.0003;THETA=0.0001;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 233936166 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0156;AVGPOST=0.9998;RSQ=0.9943;ERATE=0.0002;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 233936180 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0002;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233936252 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0027;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233936267 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233936288 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.2737;AVGPOST=0.9979;RSQ=0.9960;ERATE=0.0003;THETA=0.0003;AC=598;AN=2184 GT:DS:GL:BD 0.27380952 0
1 233936307 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.2610;AVGPOST=0.9971;RSQ=0.9948;ERATE=0.0003;THETA=0.0003;AC=569;AN=2184 GT:DS:GL:BD 0.26053113 0
1 233936423 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7640;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233936435 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8359;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233936480 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7525;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233936517 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1648;AVGPOST=0.9993;RSQ=0.9977;ERATE=0.0003;THETA=0.0002;AC=360;AN=2184 GT:DS:GL:BD 0.16483517 0
1 233936615 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9770;ERATE=0.0003;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 233936693 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0002;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233936705 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.596;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7345;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233936809 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6404;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233936823 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0027;AVGPOST=0.9993;RSQ=0.8839;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233936830 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233936832 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0023;AVGPOST=0.9996;RSQ=0.9234;ERATE=0.0002;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233936839 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1647;AVGPOST=0.9986;RSQ=0.9957;ERATE=0.0004;THETA=0.0006;AC=360;AN=2184 GT:DS:GL:BD 0.16483517 0
1 233936864 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1646;AVGPOST=0.9992;RSQ=0.9976;ERATE=0.0002;THETA=0.0003;AC=360;AN=2184 GT:DS:GL:BD 0.16483517 0
1 233936871 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7150;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233936872 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6132;AVGPOST=0.9988;RSQ=0.9979;ERATE=0.0004;THETA=0.0002;AC=1340;AN=2184 GT:DS:GL:BD 0.61355311 1
1 233936906 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233936927 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9426;ERATE=0.0002;THETA=0.0001;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233936975 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.5678;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233937019 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.4640;AVGPOST=0.9976;RSQ=0.9960;ERATE=0.0004;THETA=0.0002;AC=1015;AN=2184 GT:DS:GL:BD 0.46474358 0
1 233937048 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0165;AVGPOST=0.9998;RSQ=0.9946;ERATE=0.0002;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 233937120 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6135;AVGPOST=0.9988;RSQ=0.9978;ERATE=0.0005;THETA=0.0003;AC=1340;AN=2184 GT:DS:GL:BD 0.61355311 1
1 233937165 . C CT 8 PASS INDEL;BAVGPOST=0.999;BRSQ=0.640;LDAF=0.0017;AVGPOST=0.9980;RSQ=0.5643;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233937219 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1646;AVGPOST=0.9998;RSQ=0.9992;ERATE=0.0002;THETA=0.0007;AC=360;AN=2184 GT:DS:GL:BD 0.16483517 0
1 233937220 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7905;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233937277 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.748;LDAF=0.0021;AVGPOST=0.9989;RSQ=0.7664;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233937338 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1785;AVGPOST=0.9985;RSQ=0.9957;ERATE=0.0005;THETA=0.0003;AC=390;AN=2184 GT:DS:GL:BD 0.17857143 0
1 233937434 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.5556;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233937698 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.778;LDAF=0.0031;AVGPOST=0.9995;RSQ=0.9423;ERATE=0.0002;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233937774 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0092;AVGPOST=0.9992;RSQ=0.9625;ERATE=0.0002;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 233937865 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.849;LDAF=0.0036;AVGPOST=0.9989;RSQ=0.8528;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233937878 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.601;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6669;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233937889 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233937948 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9895;ERATE=0.0002;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233937962 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0265;AVGPOST=1.0000;RSQ=0.9992;ERATE=0.0002;THETA=0.0006;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 233938053 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0026;AVGPOST=0.9992;RSQ=0.8715;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233938166 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1642;AVGPOST=0.9979;RSQ=0.9940;ERATE=0.0005;THETA=0.0004;AC=358;AN=2184 GT:DS:GL:BD 0.16391942 0
1 233938267 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.944;LDAF=0.0211;AVGPOST=0.9983;RSQ=0.9656;ERATE=0.0002;THETA=0.0011;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 233938276 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6980;ERATE=0.0002;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233938364 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.785;LDAF=0.0025;AVGPOST=0.9994;RSQ=0.8803;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233938400 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3100;AVGPOST=0.9989;RSQ=0.9980;ERATE=0.0004;THETA=0.0007;AC=678;AN=2184 GT:DS:GL:BD 0.31043956 0
1 233938442 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8675;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233938507 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233938515 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233938537 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3100;AVGPOST=0.9985;RSQ=0.9974;ERATE=0.0004;THETA=0.0007;AC=678;AN=2184 GT:DS:GL:BD 0.31043956 0
1 233938545 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.7069;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233938549 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.7907;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233938632 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0372;AVGPOST=0.9995;RSQ=0.9931;ERATE=0.0004;THETA=0.0005;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 233938656 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.3098;AVGPOST=0.9989;RSQ=0.9984;ERATE=0.0004;THETA=0.0002;AC=676;AN=2184 GT:DS:GL:BD 0.30952382 0
1 233938658 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.855;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5454;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233938672 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3097;AVGPOST=0.9992;RSQ=0.9989;ERATE=0.0003;THETA=0.0004;AC=676;AN=2184 GT:DS:GL:BD 0.30952382 0
1 233938682 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.778;LDAF=0.0032;AVGPOST=0.9994;RSQ=0.9292;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233938694 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233938775 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=0.9998;RSQ=0.9626;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233938865 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.3112;AVGPOST=0.9952;RSQ=0.9930;ERATE=0.0004;THETA=0.0002;AC=678;AN=2184 GT:DS:GL:BD 0.31043956 0
1 233938904 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.977;LDAF=0.3086;AVGPOST=0.9971;RSQ=0.9947;ERATE=0.0003;THETA=0.0004;AC=677;AN=2184 GT:DS:GL:BD 0.30998167 0
1 233938912 rs72387705 G GA 26702 PASS INDEL;BAVGPOST=0.988;BRSQ=0.976;LDAF=0.3097;AVGPOST=0.9939;RSQ=0.9895;ERATE=0.0006;THETA=0.0007;AC=679;AN=2184 GT:DS:GL:BD 0.31089744 0
1 233938918 . A AC 1593 PASS INDEL;BAVGPOST=0.887;BRSQ=0.743;LDAF=0.2185;AVGPOST=0.9144;RSQ=0.8349;ERATE=0.0012;THETA=0.0003;AC=491;AN=2184 GT:DS:GL:BD 0.22481684 0
1 233939035 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.3095;AVGPOST=0.9976;RSQ=0.9959;ERATE=0.0006;THETA=0.0004;AC=676;AN=2184 GT:DS:GL:BD 0.30952382 0
1 233939089 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0032;AVGPOST=0.9992;RSQ=0.9099;ERATE=0.0004;THETA=0.0034;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233939198 . C CT 17 PASS INDEL;BAVGPOST=1.000;BRSQ=0.757;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5721;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233939240 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3098;AVGPOST=0.9982;RSQ=0.9965;ERATE=0.0005;THETA=0.0004;AC=678;AN=2184 GT:DS:GL:BD 0.31043956 0
1 233939275 . CT C 2677 PASS INDEL;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0218;AVGPOST=0.9984;RSQ=0.9656;ERATE=0.0003;THETA=0.0002;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 233939349 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.3099;AVGPOST=0.9986;RSQ=0.9976;ERATE=0.0005;THETA=0.0004;AC=678;AN=2184 GT:DS:GL:BD 0.31043956 0
1 233939361 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6521;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233939422 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3093;AVGPOST=0.9968;RSQ=0.9943;ERATE=0.0008;THETA=0.0004;AC=676;AN=2184 GT:DS:GL:BD 0.30952382 0
1 233939581 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0021;AVGPOST=0.9988;RSQ=0.7589;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233939679 . TAG T 4223 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0216;AVGPOST=0.9998;RSQ=0.9964;ERATE=0.0003;THETA=0.0002;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 233939682 . CTA C 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5979;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233939698 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3100;AVGPOST=0.9989;RSQ=0.9980;ERATE=0.0003;THETA=0.0005;AC=678;AN=2184 GT:DS:GL:BD 0.31043956 0
1 233939767 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.979;LDAF=0.3076;AVGPOST=0.9935;RSQ=0.9884;ERATE=0.0011;THETA=0.0010;AC=675;AN=2184 GT:DS:GL:BD 0.30906594 0
1 233939812 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3090;AVGPOST=0.9974;RSQ=0.9958;ERATE=0.0005;THETA=0.0003;AC=677;AN=2184 GT:DS:GL:BD 0.30998167 0
1 233939860 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.603;LDAF=0.0242;AVGPOST=0.9751;RSQ=0.5895;ERATE=0.0061;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 233939873 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.954;BRSQ=0.901;LDAF=0.2831;AVGPOST=0.9704;RSQ=0.9505;ERATE=0.0006;THETA=0.0001;AC=635;AN=2184 GT:DS:GL:BD 0.29075092 0
1 233939886 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.947;BRSQ=0.883;LDAF=0.2820;AVGPOST=0.9691;RSQ=0.9482;ERATE=0.0005;THETA=0.0005;AC=631;AN=2184 GT:DS:GL:BD 0.28891942 0
1 233939925 rs60980904 A AG 9625 PASS INDEL;BAVGPOST=0.880;BRSQ=0.726;LDAF=0.2434;AVGPOST=0.8991;RSQ=0.8189;ERATE=0.0096;THETA=0.0004;AC=538;AN=2184 GT:DS:GL:BD 0.24633700 0
1 233939948 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.393;LDAF=0.0157;AVGPOST=0.9823;RSQ=0.5618;ERATE=0.0007;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 233940017 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233940056 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5253;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233940074 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.7028;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233940155 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0117;AVGPOST=0.9968;RSQ=0.9046;ERATE=0.0004;THETA=0.0007;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 233940169 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0026;AVGPOST=0.9957;RSQ=0.3815;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233940191 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0109;AVGPOST=0.9979;RSQ=0.9181;ERATE=0.0004;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 233940213 . AC A 526 PASS INDEL;BAVGPOST=0.994;BRSQ=0.871;LDAF=0.0276;AVGPOST=0.9872;RSQ=0.8155;ERATE=0.0012;THETA=0.0006;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 233940270 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3102;AVGPOST=0.9970;RSQ=0.9949;ERATE=0.0007;THETA=0.0003;AC=677;AN=2184 GT:DS:GL:BD 0.30998167 0
1 233940383 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3093;AVGPOST=0.9961;RSQ=0.9937;ERATE=0.0006;THETA=0.0007;AC=676;AN=2184 GT:DS:GL:BD 0.30952382 0
1 233940414 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0146;AVGPOST=0.9991;RSQ=0.9726;ERATE=0.0004;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 233940589 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7411;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233940610 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.819;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7257;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233940613 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3099;AVGPOST=0.9989;RSQ=0.9980;ERATE=0.0004;THETA=0.0005;AC=678;AN=2184 GT:DS:GL:BD 0.31043956 0
1 233940730 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3106;AVGPOST=0.9973;RSQ=0.9952;ERATE=0.0005;THETA=0.0004;AC=678;AN=2184 GT:DS:GL:BD 0.31043956 0
1 233940742 . AC A 53 PASS INDEL;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6305;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233940764 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1427;AVGPOST=0.9985;RSQ=0.9954;ERATE=0.0003;THETA=0.0002;AC=312;AN=2184 GT:DS:GL:BD 0.14285715 0
1 233940769 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3100;AVGPOST=0.9990;RSQ=0.9982;ERATE=0.0004;THETA=0.0004;AC=678;AN=2184 GT:DS:GL:BD 0.31043956 0
1 233940782 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233940826 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233940851 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0035;AVGPOST=0.9982;RSQ=0.7803;ERATE=0.0002;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233940864 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.830;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233940876 . A AC 4178 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0246;AVGPOST=0.9989;RSQ=0.9827;ERATE=0.0003;THETA=0.0002;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 233940930 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.989;LDAF=0.3117;AVGPOST=0.9925;RSQ=0.9874;ERATE=0.0010;THETA=0.0003;AC=680;AN=2184 GT:DS:GL:BD 0.31135532 0
1 233940941 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6431;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233940959 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9399;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233940999 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5546;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233941061 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3105;AVGPOST=0.9994;RSQ=0.9988;ERATE=0.0003;THETA=0.0005;AC=678;AN=2184 GT:DS:GL:BD 0.31043956 0
1 233941297 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7946;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233941300 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6135;AVGPOST=0.9968;RSQ=0.9949;ERATE=0.0004;THETA=0.0004;AC=1342;AN=2184 GT:DS:GL:BD 0.61446887 1
1 233941324 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.7494;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233941440 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0215;AVGPOST=0.9999;RSQ=0.9982;ERATE=0.0002;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 233941482 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8648;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233941487 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233941495 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2598;AVGPOST=0.9987;RSQ=0.9977;ERATE=0.0003;THETA=0.0025;AC=567;AN=2184 GT:DS:GL:BD 0.25961539 0
1 233941568 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0242;AVGPOST=0.9995;RSQ=0.9919;ERATE=0.0003;THETA=0.0043;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 233941592 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.874;LDAF=0.0181;AVGPOST=0.9950;RSQ=0.8909;ERATE=0.0005;THETA=0.0007;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 233941882 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=0.9998;RSQ=0.9702;ERATE=0.0002;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233941936 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6260;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233941971 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6220;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233941992 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0032;AVGPOST=0.9977;RSQ=0.7009;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233942145 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.956;LDAF=0.0415;AVGPOST=0.9954;RSQ=0.9559;ERATE=0.0002;THETA=0.0003;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 233942241 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0266;AVGPOST=0.9997;RSQ=0.9949;ERATE=0.0003;THETA=0.0002;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 233942247 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0371;AVGPOST=0.9986;RSQ=0.9829;ERATE=0.0004;THETA=0.0048;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 233942284 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.953;LDAF=0.0294;AVGPOST=0.9946;RSQ=0.9325;ERATE=0.0011;THETA=0.0004;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 233942294 . G GTA 40 PASS INDEL;BAVGPOST=0.998;BRSQ=0.645;LDAF=0.0043;AVGPOST=0.9956;RSQ=0.5600;ERATE=0.0009;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233942306 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.968;LDAF=0.1120;AVGPOST=0.9898;RSQ=0.9624;ERATE=0.0010;THETA=0.0006;AC=243;AN=2184 GT:DS:GL:BD 0.11126374 0
1 233942317 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.608;LDAF=0.0037;AVGPOST=0.9941;RSQ=0.3697;ERATE=0.0007;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233942362 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.550;LDAF=0.0347;AVGPOST=0.9676;RSQ=0.6135;ERATE=0.0029;THETA=0.0004;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 233942372 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.887;BRSQ=0.674;LDAF=0.2113;AVGPOST=0.8821;RSQ=0.7449;ERATE=0.0114;THETA=0.0004;AC=440;AN=2184 GT:DS:GL:BD 0.20146520 0
1 233942374 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.933;BRSQ=0.709;LDAF=0.1388;AVGPOST=0.9298;RSQ=0.7765;ERATE=0.0064;THETA=0.0004;AC=281;AN=2184 GT:DS:GL:BD 0.12866300 0
1 233942376 . CAT C 587 PASS INDEL;BAVGPOST=0.993;BRSQ=0.861;LDAF=0.0304;AVGPOST=0.9894;RSQ=0.8682;ERATE=0.0008;THETA=0.0026;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 233942652 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.689;LDAF=0.0036;AVGPOST=0.9986;RSQ=0.8586;ERATE=0.0004;THETA=0.0013;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233942710 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0054;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233942731 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8410;ERATE=0.0003;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233943014 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6997;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233943025 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.711;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5772;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233943028 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1059;AVGPOST=0.9992;RSQ=0.9971;ERATE=0.0002;THETA=0.0002;AC=232;AN=2184 GT:DS:GL:BD 0.10622711 0
1 233943031 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8476;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233943045 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1068;AVGPOST=0.9981;RSQ=0.9927;ERATE=0.0005;THETA=0.0026;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 233943082 rs35676129 TTAAC T 191 PASS INDEL;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7129;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233943184 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5606;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233943218 . G GT 12 PASS INDEL;BAVGPOST=0.995;BRSQ=0.574;LDAF=0.0086;AVGPOST=0.9878;RSQ=0.4648;ERATE=0.0022;THETA=0.0018;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233943228 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6151;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233943302 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.771;LDAF=0.0022;AVGPOST=0.9988;RSQ=0.7688;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233943331 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.950;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9871;ERATE=0.0002;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 233943364 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9191;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233943394 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0370;AVGPOST=0.9993;RSQ=0.9917;ERATE=0.0002;THETA=0.0006;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 233943447 . TAA T 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.5102;ERATE=0.0003;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233943450 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4911;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233943595 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.1467;AVGPOST=0.9975;RSQ=0.9920;ERATE=0.0004;THETA=0.0006;AC=320;AN=2184 GT:DS:GL:BD 0.14652015 0
1 233943598 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0209;AVGPOST=0.9990;RSQ=0.9811;ERATE=0.0003;THETA=0.0014;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 233943693 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7529;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233943705 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0168;AVGPOST=0.9994;RSQ=0.9836;ERATE=0.0003;THETA=0.0020;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 233943724 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4969;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233943861 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0033;AVGPOST=0.9996;RSQ=0.9483;ERATE=0.0004;THETA=0.0020;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233943893 rs60235910 AT A 6377 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0374;AVGPOST=0.9991;RSQ=0.9898;ERATE=0.0004;THETA=0.0008;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 233944008 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233944017 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0036;AVGPOST=0.9981;RSQ=0.7796;ERATE=0.0006;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233944143 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3001;AVGPOST=0.9979;RSQ=0.9958;ERATE=0.0004;THETA=0.0003;AC=656;AN=2184 GT:DS:GL:BD 0.30036631 0
1 233944187 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.6340;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233944248 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4794;AVGPOST=0.9969;RSQ=0.9950;ERATE=0.0006;THETA=0.0005;AC=1048;AN=2184 GT:DS:GL:BD 0.47985348 0
1 233944337 . TC T 28 PASS INDEL;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233944416 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0902;AVGPOST=0.9990;RSQ=0.9949;ERATE=0.0003;THETA=0.0004;AC=196;AN=2184 GT:DS:GL:BD 0.08974359 0
1 233944534 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0087;AVGPOST=0.9990;RSQ=0.9659;ERATE=0.0002;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 233944639 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233944723 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0374;AVGPOST=0.9989;RSQ=0.9894;ERATE=0.0003;THETA=0.0006;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 233944748 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9647;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233944790 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0033;AVGPOST=0.9986;RSQ=0.8374;ERATE=0.0004;THETA=0.0013;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233944792 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.849;LDAF=0.0066;AVGPOST=0.9966;RSQ=0.8001;ERATE=0.0005;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 233944885 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.5778;ERATE=0.0004;THETA=0.0044;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233944919 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8310;ERATE=0.0002;THETA=0.0035;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233944925 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1140;AVGPOST=0.9994;RSQ=0.9976;ERATE=0.0002;THETA=0.0005;AC=249;AN=2184 GT:DS:GL:BD 0.11401099 0
1 233944985 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9895;ERATE=0.0002;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233945078 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4826;ERATE=0.0003;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233945133 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0303;AVGPOST=0.9991;RSQ=0.9878;ERATE=0.0003;THETA=0.0005;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 233945169 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.977;LDAF=0.2606;AVGPOST=0.9869;RSQ=0.9776;ERATE=0.0090;THETA=0.0005;AC=568;AN=2184 GT:DS:GL:BD 0.26007327 0
1 233945199 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0032;AVGPOST=0.9998;RSQ=0.9788;ERATE=0.0002;THETA=0.0067;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233945206 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8824;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233945429 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8849;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233945480 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0002;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233945630 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233945755 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.809;LDAF=0.0037;AVGPOST=0.9991;RSQ=0.8937;ERATE=0.0002;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233945759 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2577;AVGPOST=0.9974;RSQ=0.9952;ERATE=0.0005;THETA=0.0042;AC=562;AN=2184 GT:DS:GL:BD 0.25732601 0
1 233945772 . CAAT C 1400 PASS INDEL;BAVGPOST=0.998;BRSQ=0.847;LDAF=0.0073;AVGPOST=0.9979;RSQ=0.8906;ERATE=0.0004;THETA=0.0011;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 233945837 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0048;AVGPOST=0.9987;RSQ=0.9056;ERATE=0.0003;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233945932 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6178;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233945976 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.715;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6467;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233945979 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0267;AVGPOST=0.9994;RSQ=0.9908;ERATE=0.0003;THETA=0.0004;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 233945991 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9375;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233945997 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5129;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233946219 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233946235 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1543;AVGPOST=0.9978;RSQ=0.9929;ERATE=0.0004;THETA=0.0006;AC=337;AN=2184 GT:DS:GL:BD 0.15430403 0
1 233946359 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.950;LDAF=0.0085;AVGPOST=0.9969;RSQ=0.8584;ERATE=0.0005;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 233946374 rs34026526 C CT 6991 PASS INDEL;BAVGPOST=0.971;BRSQ=0.865;LDAF=0.1359;AVGPOST=0.9480;RSQ=0.8355;ERATE=0.0067;THETA=0.0003;AC=266;AN=2184 GT:DS:GL:BD 0.12179487 0
1 233946375 . C CA 314 PASS INDEL;BAVGPOST=0.993;BRSQ=0.625;LDAF=0.0165;AVGPOST=0.9805;RSQ=0.5523;ERATE=0.0013;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 233946378 . C CCCA 767 PASS INDEL;BAVGPOST=0.993;BRSQ=0.711;LDAF=0.0202;AVGPOST=0.9887;RSQ=0.7814;ERATE=0.0007;THETA=0.0004;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 233946388 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.934;LDAF=0.1163;AVGPOST=0.9711;RSQ=0.9016;ERATE=0.0045;THETA=0.0003;AC=244;AN=2184 GT:DS:GL:BD 0.11172161 0
1 233946507 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0099;AVGPOST=0.9993;RSQ=0.9674;ERATE=0.0002;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 233946639 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8807;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233946739 . A AT 2363 PASS INDEL;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0181;AVGPOST=0.9985;RSQ=0.9684;ERATE=0.0004;THETA=0.0005;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 233946796 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.8161;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233946831 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0004;AVGPOST=0.9998;RSQ=0.7656;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233946973 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0044;AVGPOST=0.9992;RSQ=0.9133;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233946991 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7640;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233946999 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6098;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233947029 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.896;LDAF=0.0032;AVGPOST=0.9995;RSQ=0.9389;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233947265 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0035;AVGPOST=0.9984;RSQ=0.8195;ERATE=0.0006;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233947454 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6322;AVGPOST=0.9982;RSQ=0.9967;ERATE=0.0004;THETA=0.0006;AC=1381;AN=2184 GT:DS:GL:BD 0.63232601 1
1 233947534 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0059;AVGPOST=0.9996;RSQ=0.9792;ERATE=0.0002;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 233947540 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0082;AVGPOST=0.9996;RSQ=0.9785;ERATE=0.0004;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 233947565 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0106;AVGPOST=0.9999;RSQ=0.9937;ERATE=0.0002;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 233947574 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.9062;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233947580 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.958;LDAF=0.0252;AVGPOST=0.9980;RSQ=0.9733;ERATE=0.0003;THETA=0.0006;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 233947730 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0042;AVGPOST=0.9988;RSQ=0.8776;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233947797 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.728;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8847;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233947825 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1088;AVGPOST=0.9994;RSQ=0.9972;ERATE=0.0002;THETA=0.0003;AC=237;AN=2184 GT:DS:GL:BD 0.10851648 0
1 233947875 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233947935 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7642;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233948008 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6188;AVGPOST=0.9985;RSQ=0.9972;ERATE=0.0006;THETA=0.0004;AC=1352;AN=2184 GT:DS:GL:BD 0.61904764 1
1 233948042 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0438;AVGPOST=0.9992;RSQ=0.9926;ERATE=0.0003;THETA=0.0014;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 233948043 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6651;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233948153 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0024;AVGPOST=0.9972;RSQ=0.5118;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233948208 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0024;AVGPOST=0.9984;RSQ=0.7333;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233948222 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0020;AVGPOST=0.9991;RSQ=0.8049;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233948261 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.649;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.7372;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233948274 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7149;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233948295 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7563;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233948315 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.844;LDAF=0.0026;AVGPOST=0.9992;RSQ=0.8859;ERATE=0.0005;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233948377 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5741;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233948464 rs60897533 AG A 14346 PASS INDEL;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1090;AVGPOST=0.9987;RSQ=0.9941;ERATE=0.0006;THETA=0.0006;AC=237;AN=2184 GT:DS:GL:BD 0.10851648 0
1 233948551 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5433;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233948658 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8101;ERATE=0.0003;THETA=0.0018;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233948729 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.881;LDAF=0.0078;AVGPOST=0.9995;RSQ=0.9674;ERATE=0.0002;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 233948746 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7132;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233948779 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.8026;ERATE=0.0002;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233948905 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233948908 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0109;AVGPOST=0.9991;RSQ=0.9633;ERATE=0.0003;THETA=0.0011;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 233948921 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7841;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233948949 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7140;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233948995 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0476;AVGPOST=0.9974;RSQ=0.9827;ERATE=0.0002;THETA=0.0005;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 233949028 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0002;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233949033 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0014;AVGPOST=0.9996;RSQ=0.8847;ERATE=0.0002;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233949040 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0016;AVGPOST=0.9980;RSQ=0.5123;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233949069 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6738;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233949293 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0217;AVGPOST=0.9996;RSQ=0.9915;ERATE=0.0003;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 233949299 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0758;AVGPOST=0.9974;RSQ=0.9862;ERATE=0.0003;THETA=0.0003;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 233949303 . CAG C 279 PASS INDEL;BAVGPOST=0.977;BRSQ=0.658;LDAF=0.0616;AVGPOST=0.9361;RSQ=0.5533;ERATE=0.0215;THETA=0.0003;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 233949460 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1236;AVGPOST=0.9990;RSQ=0.9963;ERATE=0.0002;THETA=0.0004;AC=270;AN=2184 GT:DS:GL:BD 0.12362637 0
1 233949625 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0062;AVGPOST=0.9991;RSQ=0.9505;ERATE=0.0002;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 233949728 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.4147;ERATE=0.0006;THETA=0.0041;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233949744 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.743;LDAF=0.0046;AVGPOST=0.9984;RSQ=0.8451;ERATE=0.0005;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233949866 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6525;ERATE=0.0003;THETA=0.0039;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233949933 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0052;AVGPOST=0.9995;RSQ=0.9579;ERATE=0.0004;THETA=0.0010;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 233949948 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6883;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233949972 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4785;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233949980 . T TA 6 PASS INDEL;BAVGPOST=0.999;BRSQ=0.626;LDAF=0.0036;AVGPOST=0.9949;RSQ=0.5034;ERATE=0.0008;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233950012 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1239;AVGPOST=0.9992;RSQ=0.9965;ERATE=0.0004;THETA=0.0004;AC=270;AN=2184 GT:DS:GL:BD 0.12362637 0
1 233950041 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0115;AVGPOST=0.9979;RSQ=0.9291;ERATE=0.0002;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 233950072 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.655;LDAF=0.0024;AVGPOST=0.9960;RSQ=0.4588;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233950185 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.8179;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233950272 . TTG T 204 PASS INDEL;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6181;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233950276 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1418;AVGPOST=0.9978;RSQ=0.9927;ERATE=0.0003;THETA=0.0003;AC=310;AN=2184 GT:DS:GL:BD 0.14194140 0
1 233950433 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0002;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233950593 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5270;ERATE=0.0002;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233950893 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6229;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233950924 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.3378;AVGPOST=0.9967;RSQ=0.9938;ERATE=0.0005;THETA=0.0005;AC=738;AN=2184 GT:DS:GL:BD 0.33791208 0
1 233950967 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0217;AVGPOST=0.9995;RSQ=0.9904;ERATE=0.0003;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 233951025 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7143;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233951086 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233951132 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0032;AVGPOST=0.9974;RSQ=0.7462;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233951149 . TA T 113 PASS INDEL;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7550;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233951238 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233951284 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.845;LDAF=0.0038;AVGPOST=0.9986;RSQ=0.8318;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233951332 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0015;AVGPOST=0.9981;RSQ=0.5927;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233951333 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.7681;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233951391 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8118;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233951392 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4803;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233951573 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0262;AVGPOST=0.9996;RSQ=0.9945;ERATE=0.0003;THETA=0.0004;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 233951601 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.0766;AVGPOST=0.9988;RSQ=0.9938;ERATE=0.0003;THETA=0.0004;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 233951659 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.991;LDAF=0.6438;AVGPOST=0.9971;RSQ=0.9948;ERATE=0.0004;THETA=0.0003;AC=1404;AN=2184 GT:DS:GL:BD 0.64285713 1
1 233951671 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0216;AVGPOST=0.9997;RSQ=0.9933;ERATE=0.0003;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 233951708 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.6945;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233951859 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0018;AVGPOST=0.9976;RSQ=0.5276;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233951925 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0751;AVGPOST=0.9997;RSQ=0.9979;ERATE=0.0003;THETA=0.0004;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 233952014 rs34357717 AC A 20410 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1407;AVGPOST=0.9988;RSQ=0.9955;ERATE=0.0003;THETA=0.0006;AC=307;AN=2184 GT:DS:GL:BD 0.14056776 0
1 233952037 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5112;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233952117 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.6010;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233952189 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7814;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233952203 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8845;ERATE=0.0006;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233952266 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233952298 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233952307 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0749;AVGPOST=0.9997;RSQ=0.9979;ERATE=0.0003;THETA=0.0002;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 233952309 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3419;AVGPOST=0.9975;RSQ=0.9951;ERATE=0.0004;THETA=0.0003;AC=745;AN=2184 GT:DS:GL:BD 0.34111720 0
1 233952424 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8773;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233952467 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6190;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233952472 . GC G 53 PASS INDEL;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6329;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233952525 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0753;AVGPOST=0.9990;RSQ=0.9951;ERATE=0.0003;THETA=0.0005;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 233952580 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9944;ERATE=0.0002;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 233952608 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0759;AVGPOST=0.9995;RSQ=0.9968;ERATE=0.0004;THETA=0.0004;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 233952630 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0749;AVGPOST=0.9996;RSQ=0.9974;ERATE=0.0003;THETA=0.0007;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 233952631 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7332;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233952683 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5434;ERATE=0.0003;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233952698 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233952792 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233952844 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0750;AVGPOST=0.9996;RSQ=0.9977;ERATE=0.0003;THETA=0.0003;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 233952921 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.0746;AVGPOST=0.9989;RSQ=0.9935;ERATE=0.0003;THETA=0.0002;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 233952925 rs58510727 C CT 4316 PASS INDEL;BAVGPOST=0.975;BRSQ=0.838;LDAF=0.1006;AVGPOST=0.9529;RSQ=0.7990;ERATE=0.0144;THETA=0.0004;AC=195;AN=2184 GT:DS:GL:BD 0.08928572 0
1 233953044 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9896;ERATE=0.0002;THETA=0.0032;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233953051 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0700;AVGPOST=0.9998;RSQ=0.9987;ERATE=0.0002;THETA=0.0002;AC=153;AN=2184 GT:DS:GL:BD 0.07005495 0
1 233953264 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.708;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233953327 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0769;AVGPOST=0.9997;RSQ=0.9983;ERATE=0.0003;THETA=0.0002;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 233953363 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0041;AVGPOST=0.9994;RSQ=0.9383;ERATE=0.0002;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233953403 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7917;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233953431 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5209;ERATE=0.0005;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233953470 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0768;AVGPOST=0.9999;RSQ=0.9994;ERATE=0.0002;THETA=0.0005;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 233953559 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0021;AVGPOST=0.9991;RSQ=0.8427;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233953617 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0771;AVGPOST=0.9991;RSQ=0.9962;ERATE=0.0003;THETA=0.0002;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 233953643 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0047;AVGPOST=0.9979;RSQ=0.8330;ERATE=0.0005;THETA=0.0013;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233953837 . A AT 394 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0077;AVGPOST=0.9986;RSQ=0.9279;ERATE=0.0004;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 233953862 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5722;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233953923 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0279;AVGPOST=0.9991;RSQ=0.9875;ERATE=0.0003;THETA=0.0003;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 233953933 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0055;AVGPOST=0.9989;RSQ=0.9227;ERATE=0.0004;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 233953993 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233954057 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6521;AVGPOST=0.9981;RSQ=0.9967;ERATE=0.0004;THETA=0.0015;AC=1423;AN=2184 GT:DS:GL:BD 0.65155679 1
1 233954067 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0022;AVGPOST=0.9989;RSQ=0.8102;ERATE=0.0002;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233954122 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.743;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0002;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233954151 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6299;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233954197 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.1039;AVGPOST=0.9983;RSQ=0.9929;ERATE=0.0002;THETA=0.0020;AC=226;AN=2184 GT:DS:GL:BD 0.10347985 0
1 233954211 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0711;AVGPOST=0.9996;RSQ=0.9977;ERATE=0.0002;THETA=0.0003;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 233954228 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9034;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233954231 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0106;AVGPOST=0.9999;RSQ=0.9958;ERATE=0.0002;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 233954246 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.867;LDAF=0.0018;AVGPOST=0.9999;RSQ=0.9762;ERATE=0.0002;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233954265 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233954266 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0050;AVGPOST=0.9998;RSQ=0.9830;ERATE=0.0002;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 233954283 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.3518;AVGPOST=0.9967;RSQ=0.9940;ERATE=0.0005;THETA=0.0005;AC=767;AN=2184 GT:DS:GL:BD 0.35119048 0
1 233954580 . CCTT C 58 PASS INDEL;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0020;AVGPOST=0.9977;RSQ=0.4843;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233954613 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9438;ERATE=0.0002;THETA=0.0017;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233954701 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233954729 rs57713667 TG T 179 PASS INDEL;BAVGPOST=0.999;BRSQ=0.864;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7732;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233954771 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7109;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233954792 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9997;RSQ=0.9743;ERATE=0.0002;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 233954821 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6464;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233954869 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.6360;AVGPOST=0.9958;RSQ=0.9930;ERATE=0.0006;THETA=0.0047;AC=1388;AN=2184 GT:DS:GL:BD 0.63553113 1
1 233954949 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0026;AVGPOST=0.9992;RSQ=0.8618;ERATE=0.0002;THETA=0.0112;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233955064 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6919;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233955479 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0039;AVGPOST=0.9991;RSQ=0.8986;ERATE=0.0003;THETA=0.0052;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233955556 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7685;ERATE=0.0003;THETA=0.0054;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233955576 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6004;ERATE=0.0003;THETA=0.0123;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233955629 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0143;AVGPOST=0.9977;RSQ=0.9338;ERATE=0.0005;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 233955630 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7200;ERATE=0.0003;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233955697 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.6897;AVGPOST=0.9932;RSQ=0.9897;ERATE=0.0008;THETA=0.0013;AC=1507;AN=2184 GT:DS:GL:BD 0.69001830 1
1 233955738 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.1106;AVGPOST=0.9975;RSQ=0.9902;ERATE=0.0003;THETA=0.0005;AC=242;AN=2184 GT:DS:GL:BD 0.11080586 0
1 233955852 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.896;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233955858 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.6695;AVGPOST=0.9955;RSQ=0.9926;ERATE=0.0004;THETA=0.0053;AC=1461;AN=2184 GT:DS:GL:BD 0.66895604 1
1 233955920 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0051;AVGPOST=0.9990;RSQ=0.9281;ERATE=0.0005;THETA=0.0038;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 233956197 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6737;ERATE=0.0002;THETA=0.0132;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233956232 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7876;AVGPOST=0.9972;RSQ=0.9932;ERATE=0.0005;THETA=0.0005;AC=1720;AN=2184 GT:DS:GL:BD 0.78754580 1
1 233956236 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.723;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8639;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233956356 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9691;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233956363 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6850;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233956413 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.983;LDAF=0.1225;AVGPOST=0.9979;RSQ=0.9926;ERATE=0.0004;THETA=0.0006;AC=268;AN=2184 GT:DS:GL:BD 0.12271062 0
1 233956444 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0023;AVGPOST=0.9994;RSQ=0.8848;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233956451 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9741;ERATE=0.0002;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233956458 . CAGT C 1019 PASS INDEL;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0052;AVGPOST=0.9984;RSQ=0.8741;ERATE=0.0004;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 233956654 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.0036;AVGPOST=0.9979;RSQ=0.7788;ERATE=0.0006;THETA=0.0019;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233956877 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7355;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233956898 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.9030;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233956930 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6872;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233957017 . GC G 143 PASS INDEL;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9258;ERATE=0.0002;THETA=0.0029;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233957082 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.837;LDAF=0.0077;AVGPOST=0.9957;RSQ=0.7946;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 233957084 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9407;ERATE=0.0004;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233957094 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=1.000;LDAF=0.0434;AVGPOST=0.9989;RSQ=0.9894;ERATE=0.0004;THETA=0.0005;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 233957312 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7882;AVGPOST=0.9978;RSQ=0.9950;ERATE=0.0005;THETA=0.0006;AC=1720;AN=2184 GT:DS:GL:BD 0.78754580 1
1 233957343 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7881;AVGPOST=0.9968;RSQ=0.9932;ERATE=0.0003;THETA=0.0003;AC=1720;AN=2184 GT:DS:GL:BD 0.78754580 1
1 233957385 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.7395;AVGPOST=0.9936;RSQ=0.9892;ERATE=0.0004;THETA=0.0004;AC=1612;AN=2184 GT:DS:GL:BD 0.73809522 1
1 233957463 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6054;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233957469 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5571;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233957611 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.777;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.7637;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233957714 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.701;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6229;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233957722 . TG T 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4958;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233957759 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.776;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7853;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233957897 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0112;AVGPOST=0.9986;RSQ=0.9428;ERATE=0.0005;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 233957907 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0075;AVGPOST=0.9963;RSQ=0.8061;ERATE=0.0005;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 233957927 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.572;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.3976;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233957938 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.722;LDAF=0.0098;AVGPOST=0.9961;RSQ=0.8434;ERATE=0.0004;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 233957980 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5060;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233958041 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0433;AVGPOST=0.9996;RSQ=0.9970;ERATE=0.0002;THETA=0.0003;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 233958045 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0024;AVGPOST=0.9990;RSQ=0.8368;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233958198 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0395;AVGPOST=0.9989;RSQ=0.9887;ERATE=0.0004;THETA=0.0004;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 233958219 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0019;AVGPOST=0.9986;RSQ=0.7258;ERATE=0.0003;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233958238 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6322;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233958239 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.750;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4958;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233958295 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.965;LDAF=0.7811;AVGPOST=0.9920;RSQ=0.9830;ERATE=0.0008;THETA=0.0004;AC=1706;AN=2184 GT:DS:GL:BD 0.78113556 1
1 233958337 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.731;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4912;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233958462 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.516;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5262;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233958701 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.898;LDAF=0.0038;AVGPOST=0.9989;RSQ=0.9075;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233958815 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.777;LDAF=0.0015;AVGPOST=0.9978;RSQ=0.4214;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233958855 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1221;AVGPOST=0.9988;RSQ=0.9953;ERATE=0.0003;THETA=0.0007;AC=267;AN=2184 GT:DS:GL:BD 0.12225275 0
1 233958863 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7876;AVGPOST=0.9993;RSQ=0.9981;ERATE=0.0004;THETA=0.0003;AC=1720;AN=2184 GT:DS:GL:BD 0.78754580 1
1 233958894 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.992;LDAF=0.3896;AVGPOST=0.9961;RSQ=0.9933;ERATE=0.0004;THETA=0.0003;AC=850;AN=2184 GT:DS:GL:BD 0.38919413 0
1 233958902 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7147;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233959232 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0044;AVGPOST=0.9992;RSQ=0.9166;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233959258 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.959;LDAF=0.7643;AVGPOST=0.9761;RSQ=0.9516;ERATE=0.0064;THETA=0.0011;AC=1680;AN=2184 GT:DS:GL:BD 0.76923078 1
1 233959353 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9167;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233959433 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9738;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233959460 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.987;LDAF=0.7822;AVGPOST=0.9931;RSQ=0.9846;ERATE=0.0012;THETA=0.0003;AC=1711;AN=2184 GT:DS:GL:BD 0.78342491 1
1 233959490 rs58163618 G GA 54792 PASS INDEL;BAVGPOST=0.963;BRSQ=0.920;LDAF=0.6930;AVGPOST=0.9303;RSQ=0.8812;ERATE=0.0230;THETA=0.0003;AC=1544;AN=2184 GT:DS:GL:BD 0.70695972 1
1 233959626 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5488;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233959692 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.944;LDAF=0.7814;AVGPOST=0.9896;RSQ=0.9774;ERATE=0.0009;THETA=0.0004;AC=1711;AN=2184 GT:DS:GL:BD 0.78342491 1
1 233959715 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.949;LDAF=0.7801;AVGPOST=0.9886;RSQ=0.9754;ERATE=0.0007;THETA=0.0004;AC=1711;AN=2184 GT:DS:GL:BD 0.78342491 1
1 233959728 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.943;LDAF=0.7747;AVGPOST=0.9822;RSQ=0.9630;ERATE=0.0019;THETA=0.0003;AC=1703;AN=2184 GT:DS:GL:BD 0.77976191 1
1 233959796 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.966;LDAF=0.7347;AVGPOST=0.9896;RSQ=0.9803;ERATE=0.0007;THETA=0.0002;AC=1608;AN=2184 GT:DS:GL:BD 0.73626375 1
1 233959798 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.963;LDAF=0.7798;AVGPOST=0.9907;RSQ=0.9800;ERATE=0.0006;THETA=0.0007;AC=1707;AN=2184 GT:DS:GL:BD 0.78159338 1
1 233959825 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.980;LDAF=0.1740;AVGPOST=0.9964;RSQ=0.9909;ERATE=0.0004;THETA=0.0003;AC=381;AN=2184 GT:DS:GL:BD 0.17445055 0
1 233959862 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.688;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.3841;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233959977 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0027;AVGPOST=0.9978;RSQ=0.7239;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233960010 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6848;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233960104 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7853;AVGPOST=0.9973;RSQ=0.9939;ERATE=0.0005;THETA=0.0005;AC=1715;AN=2184 GT:DS:GL:BD 0.78525639 1
1 233960106 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0023;AVGPOST=0.9975;RSQ=0.6091;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233960108 . CATA C 3168 PASS INDEL;BAVGPOST=0.995;BRSQ=0.902;LDAF=0.0258;AVGPOST=0.9903;RSQ=0.8669;ERATE=0.0004;THETA=0.0004;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 233960135 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7872;AVGPOST=0.9984;RSQ=0.9965;ERATE=0.0004;THETA=0.0006;AC=1720;AN=2184 GT:DS:GL:BD 0.78754580 1
1 233960155 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0018;AVGPOST=0.9998;RSQ=0.9536;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233960226 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.988;LDAF=0.7843;AVGPOST=0.9944;RSQ=0.9882;ERATE=0.0013;THETA=0.0005;AC=1714;AN=2184 GT:DS:GL:BD 0.78479856 1
1 233960227 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.929;LDAF=0.0434;AVGPOST=0.9992;RSQ=0.9921;ERATE=0.0002;THETA=0.0004;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 233960237 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8079;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233960257 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5097;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233960291 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7350;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233960417 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.0439;AVGPOST=0.9994;RSQ=0.9939;ERATE=0.0003;THETA=0.0003;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 233960445 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0041;AVGPOST=1.0000;RSQ=0.9947;ERATE=0.0002;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233960481 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9802;ERATE=0.0002;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 233960508 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0025;AVGPOST=0.9992;RSQ=0.8641;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233960581 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233960603 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7883;AVGPOST=0.9984;RSQ=0.9962;ERATE=0.0004;THETA=0.0003;AC=1720;AN=2184 GT:DS:GL:BD 0.78754580 1
1 233960638 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0435;AVGPOST=0.9996;RSQ=0.9960;ERATE=0.0003;THETA=0.0017;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 233960647 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1758;AVGPOST=0.9980;RSQ=0.9955;ERATE=0.0002;THETA=0.0003;AC=383;AN=2184 GT:DS:GL:BD 0.17536630 0
1 233960706 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6681;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233960771 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0021;AVGPOST=0.9991;RSQ=0.8196;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233960821 . AAT A 72 PASS INDEL;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5112;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233960836 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.713;LDAF=0.0032;AVGPOST=0.9994;RSQ=0.9214;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233960968 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0027;AVGPOST=0.9968;RSQ=0.5675;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233960983 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.4402;AVGPOST=0.9930;RSQ=0.9889;ERATE=0.0007;THETA=0.0004;AC=963;AN=2184 GT:DS:GL:BD 0.44093406 0
1 233960996 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.5422;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233961014 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5101;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233961045 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.962;BRSQ=0.922;LDAF=0.7731;AVGPOST=0.9791;RSQ=0.9600;ERATE=0.0010;THETA=0.0002;AC=1702;AN=2184 GT:DS:GL:BD 0.77930403 1
1 233961182 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.7882;AVGPOST=0.9979;RSQ=0.9956;ERATE=0.0004;THETA=0.0003;AC=1721;AN=2184 GT:DS:GL:BD 0.78800368 1
1 233961204 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4526;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233961350 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.988;LDAF=0.7803;AVGPOST=0.9827;RSQ=0.9649;ERATE=0.0036;THETA=0.0009;AC=1710;AN=2184 GT:DS:GL:BD 0.78296703 1
1 233961381 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0015;AVGPOST=0.9983;RSQ=0.5032;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233961453 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7868;AVGPOST=0.9977;RSQ=0.9947;ERATE=0.0004;THETA=0.0011;AC=1720;AN=2184 GT:DS:GL:BD 0.78754580 1
1 233961459 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0026;AVGPOST=0.9985;RSQ=0.7309;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233961531 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4729;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233961541 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.7852;AVGPOST=0.9961;RSQ=0.9917;ERATE=0.0006;THETA=0.0003;AC=1715;AN=2184 GT:DS:GL:BD 0.78525639 1
1 233961616 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6583;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233961618 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.989;LDAF=0.3806;AVGPOST=0.9901;RSQ=0.9842;ERATE=0.0019;THETA=0.0003;AC=830;AN=2184 GT:DS:GL:BD 0.38003662 0
1 233961728 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0006;AVGPOST=0.9992;RSQ=0.3993;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233961743 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.637;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5183;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233961747 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.977;LDAF=0.7867;AVGPOST=0.9973;RSQ=0.9934;ERATE=0.0004;THETA=0.0006;AC=1720;AN=2184 GT:DS:GL:BD 0.78754580 1
1 233961777 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.947;BRSQ=0.883;LDAF=0.7303;AVGPOST=0.9123;RSQ=0.8365;ERATE=0.0236;THETA=0.0002;AC=1639;AN=2184 GT:DS:GL:BD 0.75045788 1
1 233961824 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6853;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233961957 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.721;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7249;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233962119 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.931;LDAF=0.0177;AVGPOST=0.9932;RSQ=0.8383;ERATE=0.0006;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 233962305 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.959;BRSQ=0.103;LDAF=0.1054;AVGPOST=0.8714;RSQ=0.4786;ERATE=0.0070;THETA=0.0002;AC=184;AN=2184 GT:DS:GL:BD 0.08424909 0
1 233962521 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.961;BRSQ=0.158;LDAF=0.0551;AVGPOST=0.9434;RSQ=0.6009;ERATE=0.0024;THETA=0.0005;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 233962778 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.903;BRSQ=0.174;LDAF=0.1447;AVGPOST=0.7887;RSQ=0.3250;ERATE=0.0209;THETA=0.0004;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 233963002 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.962;BRSQ=0.216;LDAF=0.0934;AVGPOST=0.8969;RSQ=0.5332;ERATE=0.0043;THETA=0.0001;AC=159;AN=2184 GT:DS:GL:BD 0.07280220 0
1 233963096 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.929;BRSQ=0.211;LDAF=0.1499;AVGPOST=0.7925;RSQ=0.3721;ERATE=0.0152;THETA=0.0004;AC=192;AN=2184 GT:DS:GL:BD 0.08791209 0
1 233963163 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.937;BRSQ=0.154;LDAF=0.1040;AVGPOST=0.8632;RSQ=0.4364;ERATE=0.0066;THETA=0.0004;AC=136;AN=2184 GT:DS:GL:BD 0.06227106 0
1 233963752 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.7878;AVGPOST=0.9988;RSQ=0.9970;ERATE=0.0004;THETA=0.0010;AC=1720;AN=2184 GT:DS:GL:BD 0.78754580 1
1 233963765 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.978;LDAF=0.1727;AVGPOST=0.9970;RSQ=0.9921;ERATE=0.0004;THETA=0.0003;AC=378;AN=2184 GT:DS:GL:BD 0.17307693 0
1 233963991 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.826;LDAF=0.0125;AVGPOST=0.9954;RSQ=0.8559;ERATE=0.0002;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 233963993 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.660;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4609;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233964048 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0048;AVGPOST=0.9953;RSQ=0.6242;ERATE=0.0005;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 233964225 . CTTTG C 43 PASS INDEL;BAVGPOST=1.000;BRSQ=0.767;LDAF=0.0032;AVGPOST=0.9959;RSQ=0.5363;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233964325 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1658;AVGPOST=0.9971;RSQ=0.9909;ERATE=0.0005;THETA=0.0002;AC=361;AN=2184 GT:DS:GL:BD 0.16529304 0
1 233964345 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4728;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233964360 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8675;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233964435 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.532;LDAF=0.0025;AVGPOST=0.9968;RSQ=0.5182;ERATE=0.0008;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233964607 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4839;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233964653 . TTGTTGA T 22744 PASS INDEL;BAVGPOST=0.987;BRSQ=0.957;LDAF=0.1696;AVGPOST=0.9949;RSQ=0.9863;ERATE=0.0007;THETA=0.0003;AC=372;AN=2184 GT:DS:GL:BD 0.17032968 0
1 233964807 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7437;AVGPOST=0.9977;RSQ=0.9957;ERATE=0.0006;THETA=0.0004;AC=1623;AN=2184 GT:DS:GL:BD 0.74313188 1
1 233965026 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.7443;AVGPOST=0.9994;RSQ=0.9985;ERATE=0.0004;THETA=0.0001;AC=1625;AN=2184 GT:DS:GL:BD 0.74404764 1
1 233965030 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.799;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8503;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233965135 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7878;AVGPOST=0.9994;RSQ=0.9984;ERATE=0.0002;THETA=0.0006;AC=1720;AN=2184 GT:DS:GL:BD 0.78754580 1
1 233965193 rs59396464 C CTTTAA 127243 PASS INDEL;BAVGPOST=0.989;BRSQ=0.980;LDAF=0.7761;AVGPOST=0.9763;RSQ=0.9505;ERATE=0.0048;THETA=0.0008;AC=1710;AN=2184 GT:DS:GL:BD 0.78296703 1
1 233965238 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5059;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233965287 . AT A 9479 PASS INDEL;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1232;AVGPOST=0.9952;RSQ=0.9835;ERATE=0.0009;THETA=0.0003;AC=268;AN=2184 GT:DS:GL:BD 0.12271062 0
1 233965295 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.774;LDAF=0.0157;AVGPOST=0.9860;RSQ=0.6675;ERATE=0.0024;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 233965339 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0332;AVGPOST=0.9978;RSQ=0.9755;ERATE=0.0003;THETA=0.0005;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 233965426 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5650;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233965441 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6329;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233965484 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.870;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6554;ERATE=0.0007;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233965493 . GT G 47 PASS INDEL;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0022;AVGPOST=0.9994;RSQ=0.8916;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233965506 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7876;AVGPOST=0.9986;RSQ=0.9971;ERATE=0.0004;THETA=0.0004;AC=1720;AN=2184 GT:DS:GL:BD 0.78754580 1
1 233965703 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0393;AVGPOST=0.9998;RSQ=0.9973;ERATE=0.0003;THETA=0.0004;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 233965749 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.786;LDAF=0.0037;AVGPOST=0.9997;RSQ=0.9652;ERATE=0.0002;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233965765 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6200;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233965813 . GT G 12195 PASS INDEL;BAVGPOST=0.965;BRSQ=0.920;LDAF=0.7397;AVGPOST=0.9322;RSQ=0.8742;ERATE=0.0233;THETA=0.0002;AC=1658;AN=2184 GT:DS:GL:BD 0.75915754 1
1 233965815 rs34178936 TC T 95928 PASS INDEL;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.7875;AVGPOST=0.9984;RSQ=0.9962;ERATE=0.0004;THETA=0.0005;AC=1719;AN=2184 GT:DS:GL:BD 0.78708792 1
1 233965841 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0021;AVGPOST=0.9987;RSQ=0.7490;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233965880 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1215;AVGPOST=0.9984;RSQ=0.9945;ERATE=0.0003;THETA=0.0003;AC=265;AN=2184 GT:DS:GL:BD 0.12133700 0
1 233965940 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.951;LDAF=0.7762;AVGPOST=0.9867;RSQ=0.9708;ERATE=0.0015;THETA=0.0002;AC=1699;AN=2184 GT:DS:GL:BD 0.77793038 1
1 233966080 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7682;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233966128 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233966350 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5357;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233966362 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7303;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233966374 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233966383 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233966411 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7878;AVGPOST=0.9991;RSQ=0.9979;ERATE=0.0003;THETA=0.0003;AC=1720;AN=2184 GT:DS:GL:BD 0.78754580 1
1 233966479 . G GT 135 PASS INDEL;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7333;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233966584 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.7445;AVGPOST=0.9981;RSQ=0.9961;ERATE=0.0005;THETA=0.0004;AC=1625;AN=2184 GT:DS:GL:BD 0.74404764 1
1 233966652 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7025;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233966659 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5433;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233966740 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0015;AVGPOST=0.9982;RSQ=0.6070;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233966848 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7440;AVGPOST=0.9979;RSQ=0.9960;ERATE=0.0004;THETA=0.0002;AC=1625;AN=2184 GT:DS:GL:BD 0.74404764 1
1 233966896 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7879;AVGPOST=0.9996;RSQ=0.9990;ERATE=0.0002;THETA=0.0009;AC=1720;AN=2184 GT:DS:GL:BD 0.78754580 1
1 233966932 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6660;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233966965 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0059;AVGPOST=0.9991;RSQ=0.9365;ERATE=0.0002;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 233967001 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0113;AVGPOST=0.9987;RSQ=0.9501;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 233967054 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233967151 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.820;LDAF=0.0068;AVGPOST=0.9959;RSQ=0.7789;ERATE=0.0004;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 233967248 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7868;AVGPOST=0.9993;RSQ=0.9981;ERATE=0.0003;THETA=0.0005;AC=1718;AN=2184 GT:DS:GL:BD 0.78663003 1
1 233967275 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.7222;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233967334 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0024;AVGPOST=0.9981;RSQ=0.6995;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233967362 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0139;AVGPOST=0.9995;RSQ=0.9809;ERATE=0.0004;THETA=0.0002;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 233967439 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6765;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233967441 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6419;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233967458 . CTT C 34 PASS INDEL;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.5890;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233967542 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5520;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233967552 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8199;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233967566 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6225;AVGPOST=0.9987;RSQ=0.9977;ERATE=0.0005;THETA=0.0003;AC=1358;AN=2184 GT:DS:GL:BD 0.62179488 1
1 233967611 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9552;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 233967654 . GTC G 13 PASS INDEL;BAVGPOST=0.996;BRSQ=0.572;LDAF=0.0035;AVGPOST=0.9953;RSQ=0.4896;ERATE=0.0010;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233967660 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.988;LDAF=0.2793;AVGPOST=0.9940;RSQ=0.9874;ERATE=0.0004;THETA=0.0002;AC=609;AN=2184 GT:DS:GL:BD 0.27884614 0
1 233967822 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6237;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233967823 . TTATC T 266 PASS INDEL;BAVGPOST=0.999;BRSQ=0.837;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9036;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233967861 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.7875;AVGPOST=0.9985;RSQ=0.9965;ERATE=0.0004;THETA=0.0004;AC=1720;AN=2184 GT:DS:GL:BD 0.78754580 1
1 233967913 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233967959 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5338;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233967964 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6324;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233968000 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7877;AVGPOST=0.9992;RSQ=0.9980;ERATE=0.0004;THETA=0.0004;AC=1720;AN=2184 GT:DS:GL:BD 0.78754580 1
1 233968033 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.605;LDAF=0.0019;AVGPOST=0.9973;RSQ=0.4986;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233968056 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6520;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233968095 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8368;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233968168 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.783;LDAF=0.0037;AVGPOST=0.9979;RSQ=0.7914;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233968187 rs35729947 C CAG 87902 PASS INDEL;BAVGPOST=0.981;BRSQ=0.960;LDAF=0.7548;AVGPOST=0.9532;RSQ=0.9077;ERATE=0.0127;THETA=0.0002;AC=1658;AN=2184 GT:DS:GL:BD 0.75915754 1
1 233968234 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0031;AVGPOST=0.9986;RSQ=0.8341;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233968263 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6745;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233968326 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7877;AVGPOST=0.9992;RSQ=0.9980;ERATE=0.0004;THETA=0.0006;AC=1720;AN=2184 GT:DS:GL:BD 0.78754580 1
1 233968354 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0045;AVGPOST=0.9991;RSQ=0.9206;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233968403 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7877;AVGPOST=0.9989;RSQ=0.9973;ERATE=0.0005;THETA=0.0003;AC=1720;AN=2184 GT:DS:GL:BD 0.78754580 1
1 233968420 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.7443;AVGPOST=0.9994;RSQ=0.9987;ERATE=0.0003;THETA=0.0002;AC=1625;AN=2184 GT:DS:GL:BD 0.74404764 1
1 233968447 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0340;AVGPOST=0.9991;RSQ=0.9890;ERATE=0.0003;THETA=0.0006;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 233968499 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0138;AVGPOST=0.9996;RSQ=0.9873;ERATE=0.0003;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 233968586 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7518;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233968603 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0434;AVGPOST=0.9999;RSQ=0.9985;ERATE=0.0002;THETA=0.0004;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 233968603 . C CTT 31 PASS INDEL;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7946;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233968608 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.6117;ERATE=0.0002;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233968644 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6392;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233968708 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233968747 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233968834 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0001;AVGPOST=0.9997;RSQ=0.0664;ERATE=0.0002;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 233968876 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8964;ERATE=0.0002;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233968909 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0394;AVGPOST=0.9997;RSQ=0.9962;ERATE=0.0004;THETA=0.0003;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 233968964 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8646;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233969190 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.752;LDAF=0.0028;AVGPOST=0.9981;RSQ=0.7220;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233969275 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0021;AVGPOST=0.9991;RSQ=0.8088;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233969302 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8061;ERATE=0.0002;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233969312 . CT C 213 PASS INDEL;BAVGPOST=0.997;BRSQ=0.671;LDAF=0.0049;AVGPOST=0.9963;RSQ=0.6664;ERATE=0.0005;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233969317 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.743;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7835;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233969320 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7299;ERATE=0.0006;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233969457 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.506;LDAF=0.0026;AVGPOST=0.9968;RSQ=0.5467;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233969489 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7211;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233969540 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.821;LDAF=0.0037;AVGPOST=0.9970;RSQ=0.6816;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233969629 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7871;AVGPOST=0.9979;RSQ=0.9952;ERATE=0.0004;THETA=0.0002;AC=1720;AN=2184 GT:DS:GL:BD 0.78754580 1
1 233969631 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7841;AVGPOST=0.9951;RSQ=0.9894;ERATE=0.0007;THETA=0.0005;AC=1713;AN=2184 GT:DS:GL:BD 0.78434068 1
1 233969727 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.961;LDAF=0.3834;AVGPOST=0.9905;RSQ=0.9836;ERATE=0.0004;THETA=0.0003;AC=841;AN=2184 GT:DS:GL:BD 0.38507327 0
1 233969768 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.726;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5218;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233969769 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.979;LDAF=0.7802;AVGPOST=0.9898;RSQ=0.9779;ERATE=0.0010;THETA=0.0003;AC=1706;AN=2184 GT:DS:GL:BD 0.78113556 1
1 233969850 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0048;AVGPOST=0.9983;RSQ=0.8452;ERATE=0.0004;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233969863 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.949;LDAF=0.7548;AVGPOST=0.9660;RSQ=0.9324;ERATE=0.0024;THETA=0.0004;AC=1666;AN=2184 GT:DS:GL:BD 0.76282054 1
1 233969867 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0038;AVGPOST=0.9976;RSQ=0.7590;ERATE=0.0005;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233969872 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.955;LDAF=0.7085;AVGPOST=0.9594;RSQ=0.9283;ERATE=0.0054;THETA=0.0008;AC=1567;AN=2184 GT:DS:GL:BD 0.71749085 1
1 233969905 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.974;LDAF=0.5959;AVGPOST=0.9692;RSQ=0.9543;ERATE=0.0039;THETA=0.0008;AC=1301;AN=2184 GT:DS:GL:BD 0.59569597 1
1 233969967 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7868;AVGPOST=0.9973;RSQ=0.9934;ERATE=0.0006;THETA=0.0002;AC=1720;AN=2184 GT:DS:GL:BD 0.78754580 1
1 233969991 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0436;AVGPOST=0.9995;RSQ=0.9946;ERATE=0.0004;THETA=0.0005;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 233969999 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.729;LDAF=0.0020;AVGPOST=0.9981;RSQ=0.6720;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233970005 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7874;AVGPOST=0.9973;RSQ=0.9938;ERATE=0.0006;THETA=0.0003;AC=1720;AN=2184 GT:DS:GL:BD 0.78754580 1
1 233970057 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7875;AVGPOST=0.9989;RSQ=0.9973;ERATE=0.0003;THETA=0.0003;AC=1720;AN=2184 GT:DS:GL:BD 0.78754580 1
1 233970065 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0045;AVGPOST=0.9981;RSQ=0.8219;ERATE=0.0005;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 233970180 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1755;AVGPOST=0.9954;RSQ=0.9875;ERATE=0.0004;THETA=0.0003;AC=382;AN=2184 GT:DS:GL:BD 0.17490843 0
1 233970186 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.860;LDAF=0.0105;AVGPOST=0.9963;RSQ=0.8727;ERATE=0.0004;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 233970257 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.699;LDAF=0.0037;AVGPOST=0.9958;RSQ=0.5616;ERATE=0.0009;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233970330 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.755;LDAF=0.0413;AVGPOST=0.9845;RSQ=0.8539;ERATE=0.0003;THETA=0.0002;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 233970530 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.450;LDAF=0.0081;AVGPOST=0.9919;RSQ=0.5728;ERATE=0.0014;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 233970796 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0026;AVGPOST=0.9992;RSQ=0.8623;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233971007 . CT C 74 PASS INDEL;BAVGPOST=0.999;BRSQ=0.797;LDAF=0.0033;AVGPOST=0.9974;RSQ=0.6552;ERATE=0.0005;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233971046 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.776;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5771;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233971093 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.802;LDAF=0.9942;AVGPOST=0.9977;RSQ=0.8163;ERATE=0.0004;THETA=0.0005;AC=2173;AN=2184 GT:DS:GL:BD 0.99496335 1
1 233971211 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0435;AVGPOST=0.9998;RSQ=0.9975;ERATE=0.0003;THETA=0.0005;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 233971481 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0436;AVGPOST=0.9995;RSQ=0.9948;ERATE=0.0002;THETA=0.0009;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 233971513 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0434;AVGPOST=0.9999;RSQ=0.9990;ERATE=0.0002;THETA=0.0003;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 233972099 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0087;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 233972285 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.873;BRSQ=0.760;LDAF=0.4249;AVGPOST=0.9682;RSQ=0.9480;ERATE=0.0008;THETA=0.0004;AC=930;AN=2184 GT:DS:GL:BD 0.42582417 0
1 233972408 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.902;BRSQ=0.807;LDAF=0.3987;AVGPOST=0.8071;RSQ=0.6772;ERATE=0.0155;THETA=0.0002;AC=817;AN=2184 GT:DS:GL:BD 0.37408423 0
1 233972416 . TTA T 111 PASS INDEL;BAVGPOST=0.982;BRSQ=0.166;LDAF=0.0803;AVGPOST=0.8789;RSQ=0.3443;ERATE=0.0092;THETA=0.0003;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 233972689 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.856;LDAF=0.0154;AVGPOST=0.9963;RSQ=0.9129;ERATE=0.0003;THETA=0.0012;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 233972726 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.624;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5157;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233972825 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0033;AVGPOST=0.9980;RSQ=0.7567;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233972826 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4575;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233972866 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.7474;AVGPOST=0.9953;RSQ=0.9909;ERATE=0.0007;THETA=0.0007;AC=1629;AN=2184 GT:DS:GL:BD 0.74587911 1
1 233972918 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.610;LDAF=0.0047;AVGPOST=0.9949;RSQ=0.5695;ERATE=0.0006;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233972926 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.965;LDAF=0.5995;AVGPOST=0.9452;RSQ=0.9171;ERATE=0.0101;THETA=0.0002;AC=1324;AN=2184 GT:DS:GL:BD 0.60622710 1
1 233972926 . A AG 5551 PASS INDEL;BAVGPOST=0.805;BRSQ=0.696;LDAF=0.4787;AVGPOST=0.7797;RSQ=0.6887;ERATE=0.0364;THETA=0.0012;AC=1111;AN=2184 GT:DS:GL:BD 0.50869966 1
1 233972931 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.975;LDAF=0.0409;AVGPOST=0.9975;RSQ=0.9737;ERATE=0.0004;THETA=0.0031;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 233973077 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6188;AVGPOST=0.9931;RSQ=0.9886;ERATE=0.0014;THETA=0.0004;AC=1351;AN=2184 GT:DS:GL:BD 0.61858976 1
1 233973145 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0088;AVGPOST=0.9989;RSQ=0.9422;ERATE=0.0003;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 233973203 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9375;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233973243 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.733;LDAF=0.0041;AVGPOST=0.9952;RSQ=0.5459;ERATE=0.0007;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233973244 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0066;AVGPOST=0.9994;RSQ=0.9542;ERATE=0.0004;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 233973309 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4942;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233973360 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0059;AVGPOST=0.9991;RSQ=0.9327;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 233973366 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0063;AVGPOST=0.9993;RSQ=0.9577;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 233973451 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4354;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233973489 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.895;LDAF=0.0103;AVGPOST=0.9963;RSQ=0.8725;ERATE=0.0004;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 233973584 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.987;LDAF=0.8053;AVGPOST=0.9936;RSQ=0.9834;ERATE=0.0009;THETA=0.0004;AC=1760;AN=2184 GT:DS:GL:BD 0.80586082 1
1 233973718 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0028;AVGPOST=0.9982;RSQ=0.7321;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233973729 rs11304098 TA T 28859 PASS INDEL;BAVGPOST=0.991;BRSQ=0.986;LDAF=0.4366;AVGPOST=0.9788;RSQ=0.9666;ERATE=0.0032;THETA=0.0002;AC=959;AN=2184 GT:DS:GL:BD 0.43910256 0
1 233973743 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0012;AVGPOST=0.9981;RSQ=0.3919;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233973802 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3885;AVGPOST=0.9935;RSQ=0.9885;ERATE=0.0007;THETA=0.0005;AC=847;AN=2184 GT:DS:GL:BD 0.38782051 0
1 233973928 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.776;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233973931 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233974032 . CAT C 629 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0045;AVGPOST=0.9990;RSQ=0.9091;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233974095 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1217;AVGPOST=0.9984;RSQ=0.9933;ERATE=0.0004;THETA=0.0004;AC=265;AN=2184 GT:DS:GL:BD 0.12133700 0
1 233974331 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0073;AVGPOST=0.9989;RSQ=0.9339;ERATE=0.0004;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 233974384 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.952;LDAF=0.0999;AVGPOST=0.9847;RSQ=0.9386;ERATE=0.0008;THETA=0.0004;AC=211;AN=2184 GT:DS:GL:BD 0.09661172 0
1 233974420 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5572;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233974503 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0139;AVGPOST=0.9987;RSQ=0.9595;ERATE=0.0004;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 233974563 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0053;AVGPOST=0.9994;RSQ=0.9434;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 233974579 . CA C 24 PASS INDEL;BAVGPOST=1.000;BRSQ=0.731;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4511;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233974610 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233974716 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0113;AVGPOST=0.9994;RSQ=0.9731;ERATE=0.0002;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 233974758 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233974843 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0032;AVGPOST=0.9985;RSQ=0.7980;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233974892 . GT G 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.668;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.4116;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233974951 . A AAAAG 5616 PASS INDEL;BAVGPOST=0.958;BRSQ=0.682;LDAF=0.0927;AVGPOST=0.9524;RSQ=0.7820;ERATE=0.0082;THETA=0.0002;AC=192;AN=2184 GT:DS:GL:BD 0.08791209 0
1 233975002 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.855;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9670;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233975238 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.943;LDAF=0.0131;AVGPOST=0.9982;RSQ=0.9414;ERATE=0.0005;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 233975327 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.761;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5301;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233975384 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0045;AVGPOST=0.9990;RSQ=0.9059;ERATE=0.0004;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233975459 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0063;AVGPOST=0.9989;RSQ=0.9335;ERATE=0.0004;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 233975606 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233975759 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.0067;AVGPOST=0.9970;RSQ=0.8211;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 233975762 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0026;AVGPOST=0.9967;RSQ=0.5674;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233976065 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233976170 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0138;AVGPOST=0.9990;RSQ=0.9698;ERATE=0.0003;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 233976367 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0035;AVGPOST=0.9989;RSQ=0.8756;ERATE=0.0004;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233976471 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.7879;AVGPOST=0.9944;RSQ=0.9871;ERATE=0.0008;THETA=0.0003;AC=1720;AN=2184 GT:DS:GL:BD 0.78754580 1
1 233976493 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.758;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5672;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233976515 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0012;AVGPOST=0.9983;RSQ=0.3716;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233976552 . CA C 649 PASS INDEL;BAVGPOST=0.995;BRSQ=0.834;LDAF=0.0100;AVGPOST=0.9952;RSQ=0.8007;ERATE=0.0004;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 233976634 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0051;AVGPOST=0.9985;RSQ=0.8870;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 233976729 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1763;AVGPOST=0.9967;RSQ=0.9904;ERATE=0.0006;THETA=0.0010;AC=384;AN=2184 GT:DS:GL:BD 0.17582418 0
1 233976778 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5491;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233976851 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7838;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233976885 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.799;LDAF=0.0041;AVGPOST=0.9984;RSQ=0.8313;ERATE=0.0005;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233976889 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.690;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.5471;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233976963 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.894;LDAF=0.0093;AVGPOST=0.9986;RSQ=0.9425;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 233976997 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4582;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233977084 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.806;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8821;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233977152 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0202;AVGPOST=0.9988;RSQ=0.9787;ERATE=0.0003;THETA=0.0002;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 233977165 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.752;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.5358;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233977234 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5994;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233977256 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7647;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233977303 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6612;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233977366 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9614;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233977397 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9453;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233977495 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0039;AVGPOST=0.9987;RSQ=0.8518;ERATE=0.0003;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233977556 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0027;AVGPOST=0.9955;RSQ=0.4351;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233977595 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0054;AVGPOST=0.9997;RSQ=0.9733;ERATE=0.0002;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 233977652 . G GA 44 PASS INDEL;BAVGPOST=0.996;BRSQ=0.373;LDAF=0.0062;AVGPOST=0.9910;RSQ=0.4184;ERATE=0.0027;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233977666 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0123;AVGPOST=0.9993;RSQ=0.9757;ERATE=0.0004;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 233977701 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0015;AVGPOST=0.9982;RSQ=0.5394;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233977702 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.6132;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233977714 . ACT A 222 PASS INDEL;BAVGPOST=0.999;BRSQ=0.854;LDAF=0.0034;AVGPOST=0.9991;RSQ=0.8776;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233977734 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0002;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233977783 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.824;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.8209;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233977815 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9768;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 233977981 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.903;LDAF=0.0105;AVGPOST=0.9976;RSQ=0.9097;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 233978100 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233978101 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0015;AVGPOST=0.9990;RSQ=0.7507;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233978115 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0002;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233978146 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.909;LDAF=0.0064;AVGPOST=0.9982;RSQ=0.8810;ERATE=0.0004;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 233978168 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0110;AVGPOST=0.9976;RSQ=0.9309;ERATE=0.0002;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 233978197 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9641;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233978260 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9741;ERATE=0.0002;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233978310 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0053;AVGPOST=0.9979;RSQ=0.8750;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 233978353 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8635;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233978362 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0041;AVGPOST=1.0000;RSQ=0.9947;ERATE=0.0002;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233978410 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7773;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233978433 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6675;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233978460 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0049;AVGPOST=0.9993;RSQ=0.9395;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 233978524 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233978602 . TA T 74 PASS INDEL;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.6500;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233978614 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0059;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0013;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 233978796 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8516;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233978856 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0065;AVGPOST=0.9997;RSQ=0.9767;ERATE=0.0002;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 233978895 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.858;LDAF=0.0097;AVGPOST=0.9981;RSQ=0.9218;ERATE=0.0003;THETA=0.0007;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 233979016 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9448;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233979122 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1672;AVGPOST=0.9961;RSQ=0.9896;ERATE=0.0004;THETA=0.0003;AC=365;AN=2184 GT:DS:GL:BD 0.16712454 0
1 233979126 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7150;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233979152 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6695;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233979214 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.981;LDAF=0.3875;AVGPOST=0.9885;RSQ=0.9803;ERATE=0.0012;THETA=0.0005;AC=844;AN=2184 GT:DS:GL:BD 0.38644689 0
1 233979245 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0096;AVGPOST=0.9994;RSQ=0.9680;ERATE=0.0004;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 233979284 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7457;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233979326 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.678;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6054;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233979347 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233979372 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.7076;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233979405 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6282;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233979438 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.946;LDAF=0.0110;AVGPOST=0.9978;RSQ=0.9147;ERATE=0.0003;THETA=0.0007;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 233979558 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0137;AVGPOST=0.9998;RSQ=0.9938;ERATE=0.0002;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 233979608 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0021;AVGPOST=0.9991;RSQ=0.8483;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233979853 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7198;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233979878 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0052;AVGPOST=0.9997;RSQ=0.9708;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 233979927 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8154;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233980026 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0021;AVGPOST=0.9990;RSQ=0.8196;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233980043 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.797;LDAF=0.0029;AVGPOST=0.9978;RSQ=0.7383;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233980108 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0161;AVGPOST=0.9999;RSQ=0.9962;ERATE=0.0002;THETA=0.0002;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 233980144 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0002;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233980151 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233980191 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5238;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233980200 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233980216 . TCTCA T 1350 PASS INDEL;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0099;AVGPOST=0.9989;RSQ=0.9513;ERATE=0.0002;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 233980257 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0002;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233980322 . C CT 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6252;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233980343 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0126;AVGPOST=0.9994;RSQ=0.9789;ERATE=0.0004;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 233980370 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6817;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233980394 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.680;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5910;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233980483 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8256;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233980541 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=1.0000;RSQ=0.9957;ERATE=0.0002;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 233980768 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.977;LDAF=0.1125;AVGPOST=0.9948;RSQ=0.9800;ERATE=0.0004;THETA=0.0006;AC=245;AN=2184 GT:DS:GL:BD 0.11217949 0
1 233980787 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0024;AVGPOST=0.9985;RSQ=0.7845;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233980956 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6819;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233981021 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.918;LDAF=0.0062;AVGPOST=0.9980;RSQ=0.8856;ERATE=0.0002;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 233981095 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8247;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233981173 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.799;LDAF=0.0018;AVGPOST=0.9995;RSQ=0.8781;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233981218 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5273;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233981230 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7041;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233981315 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.7100;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233981329 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0027;AVGPOST=0.9999;RSQ=0.9768;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233981355 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.963;LDAF=0.0340;AVGPOST=0.9971;RSQ=0.9661;ERATE=0.0005;THETA=0.0005;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 233981435 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.671;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233981714 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0041;AVGPOST=1.0000;RSQ=0.9947;ERATE=0.0002;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233981718 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9469;ERATE=0.0002;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233981727 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7452;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233981728 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0044;AVGPOST=0.9991;RSQ=0.9161;ERATE=0.0004;THETA=0.0013;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233981736 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8604;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233981813 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.912;LDAF=0.0110;AVGPOST=0.9977;RSQ=0.9178;ERATE=0.0005;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 233981916 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0003;AVGPOST=0.9994;RSQ=0.3673;ERATE=0.0004;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 233981943 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.782;LDAF=0.0026;AVGPOST=0.9984;RSQ=0.7513;ERATE=0.0004;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233982024 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1242;AVGPOST=0.9979;RSQ=0.9924;ERATE=0.0003;THETA=0.0002;AC=270;AN=2184 GT:DS:GL:BD 0.12362637 0
1 233982213 . TC T 175 PASS INDEL;BAVGPOST=0.998;BRSQ=0.824;LDAF=0.0044;AVGPOST=0.9983;RSQ=0.8330;ERATE=0.0003;THETA=0.0012;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233982252 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0021;AVGPOST=0.9977;RSQ=0.5547;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233982278 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9401;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233982380 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6171;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233982590 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.938;LDAF=0.0139;AVGPOST=0.9970;RSQ=0.9144;ERATE=0.0009;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 233982611 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9787;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 233982620 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.5880;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233982641 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.750;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.9110;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233982691 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7358;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233982844 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0081;AVGPOST=0.9983;RSQ=0.9125;ERATE=0.0004;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 233982858 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233982872 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0061;AVGPOST=0.9981;RSQ=0.8909;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 233982915 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.888;LDAF=0.0395;AVGPOST=0.9906;RSQ=0.9021;ERATE=0.0003;THETA=0.0009;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 233982944 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0046;AVGPOST=0.9996;RSQ=0.9595;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 233982970 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233982976 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7957;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233983035 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0002;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233983117 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0080;AVGPOST=0.9984;RSQ=0.9148;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 233983141 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9895;ERATE=0.0002;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233983144 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9747;ERATE=0.0003;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233983170 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0046;AVGPOST=0.9991;RSQ=0.9276;ERATE=0.0002;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233983247 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0048;AVGPOST=0.9987;RSQ=0.9027;ERATE=0.0002;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233983259 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5792;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233983335 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6195;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233983401 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9691;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233983503 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5650;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233983506 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0041;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233983571 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9738;ERATE=0.0002;THETA=0.0023;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233983612 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0110;AVGPOST=1.0000;RSQ=0.9980;ERATE=0.0002;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 233983780 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9691;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233983895 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.950;LDAF=0.0088;AVGPOST=0.9950;RSQ=0.7701;ERATE=0.0006;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 233983901 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0041;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233983917 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233983928 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9895;ERATE=0.0002;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233983945 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0052;AVGPOST=0.9995;RSQ=0.9557;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 233984021 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7257;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233984023 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0041;AVGPOST=0.9997;RSQ=0.9635;ERATE=0.0003;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233984059 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0029;AVGPOST=0.9998;RSQ=0.9634;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233984089 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7771;ERATE=0.0002;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233984105 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0195;AVGPOST=0.9991;RSQ=0.9836;ERATE=0.0002;THETA=0.0012;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 233984122 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.953;LDAF=0.0406;AVGPOST=0.9971;RSQ=0.9716;ERATE=0.0002;THETA=0.0002;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 233984264 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0048;AVGPOST=0.9987;RSQ=0.8816;ERATE=0.0004;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233984376 . ACT A 32 PASS INDEL;BAVGPOST=0.998;BRSQ=0.668;LDAF=0.0026;AVGPOST=0.9983;RSQ=0.7609;ERATE=0.0003;THETA=0.0044;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233984409 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233984422 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0014;AVGPOST=0.9996;RSQ=0.8819;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233984423 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0319;AVGPOST=0.9973;RSQ=0.9671;ERATE=0.0003;THETA=0.0004;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 233984584 . G GA 28 PASS INDEL;BAVGPOST=0.999;BRSQ=0.489;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5174;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233984634 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7608;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233984765 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9895;ERATE=0.0002;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233984772 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0041;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233984886 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233984887 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8303;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233984957 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9747;ERATE=0.0002;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233985043 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1595;AVGPOST=0.9968;RSQ=0.9909;ERATE=0.0004;THETA=0.0009;AC=349;AN=2184 GT:DS:GL:BD 0.15979853 0
1 233985056 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0002;THETA=0.0021;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233985071 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9895;ERATE=0.0002;THETA=0.0014;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233985114 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4235;AVGPOST=0.9963;RSQ=0.9937;ERATE=0.0004;THETA=0.0007;AC=922;AN=2184 GT:DS:GL:BD 0.42216116 0
1 233985154 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9895;ERATE=0.0002;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233985216 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0002;THETA=0.0029;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233985228 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1203;AVGPOST=0.9975;RSQ=0.9915;ERATE=0.0003;THETA=0.0020;AC=264;AN=2184 GT:DS:GL:BD 0.12087912 0
1 233985259 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0060;AVGPOST=0.9989;RSQ=0.9267;ERATE=0.0003;THETA=0.0041;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 233985263 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7298;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233985274 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1194;AVGPOST=0.9957;RSQ=0.9851;ERATE=0.0003;THETA=0.0011;AC=260;AN=2184 GT:DS:GL:BD 0.11904762 0
1 233985295 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233985320 . TGAG T 2139 PASS INDEL;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0158;AVGPOST=0.9993;RSQ=0.9806;ERATE=0.0002;THETA=0.0026;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 233985324 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.994;LDAF=0.4055;AVGPOST=0.9930;RSQ=0.9884;ERATE=0.0005;THETA=0.0072;AC=884;AN=2184 GT:DS:GL:BD 0.40476191 0
1 233985354 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0003;THETA=0.0085;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233985357 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0052;AVGPOST=0.9997;RSQ=0.9748;ERATE=0.0002;THETA=0.0067;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 233985449 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.666;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7315;ERATE=0.0002;THETA=0.0257;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233985489 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0066;AVGPOST=0.9995;RSQ=0.9668;ERATE=0.0003;THETA=0.0078;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 233985612 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.9016;ERATE=0.0002;THETA=0.0156;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233985683 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233985832 rs57899271 GA G 896 PASS INDEL;BAVGPOST=0.978;BRSQ=0.693;LDAF=0.0357;AVGPOST=0.9654;RSQ=0.6173;ERATE=0.0076;THETA=0.0050;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 233985864 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0023;AVGPOST=0.9995;RSQ=0.9040;ERATE=0.0002;THETA=0.0075;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233986003 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.943;LDAF=0.0108;AVGPOST=0.9990;RSQ=0.9627;ERATE=0.0003;THETA=0.0208;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 233986263 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.778;LDAF=0.0023;AVGPOST=0.9984;RSQ=0.7326;ERATE=0.0003;THETA=0.0050;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233986306 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.948;LDAF=0.0150;AVGPOST=0.9978;RSQ=0.9426;ERATE=0.0003;THETA=0.0116;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 233986393 . GT G 879 PASS INDEL;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0143;AVGPOST=0.9985;RSQ=0.9585;ERATE=0.0003;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 233986426 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0107;AVGPOST=0.9996;RSQ=0.9818;ERATE=0.0002;THETA=0.0048;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 233986468 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0024;AVGPOST=0.9995;RSQ=0.9111;ERATE=0.0004;THETA=0.0027;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233986531 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6616;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233986576 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0061;AVGPOST=0.9994;RSQ=0.9509;ERATE=0.0002;THETA=0.0170;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 233986579 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1338;AVGPOST=0.9948;RSQ=0.9833;ERATE=0.0004;THETA=0.0009;AC=291;AN=2184 GT:DS:GL:BD 0.13324176 0
1 233986603 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7185;ERATE=0.0003;THETA=0.0023;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233986657 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0103;AVGPOST=0.9995;RSQ=0.9765;ERATE=0.0003;THETA=0.0015;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 233986776 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0771;AVGPOST=0.9974;RSQ=0.9878;ERATE=0.0002;THETA=0.0050;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 233986809 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.675;LDAF=0.0083;AVGPOST=0.9941;RSQ=0.7185;ERATE=0.0005;THETA=0.0012;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 233986817 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.825;LDAF=0.0037;AVGPOST=0.9977;RSQ=0.7278;ERATE=0.0006;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233986839 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.500;LDAF=0.0101;AVGPOST=0.9909;RSQ=0.6195;ERATE=0.0007;THETA=0.0024;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 233986869 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0189;AVGPOST=0.9942;RSQ=0.8699;ERATE=0.0009;THETA=0.0039;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 233986976 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0050;AVGPOST=0.9943;RSQ=0.5657;ERATE=0.0005;THETA=0.0019;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233987066 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0783;AVGPOST=0.9980;RSQ=0.9902;ERATE=0.0004;THETA=0.0021;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 233987114 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0101;AVGPOST=0.9998;RSQ=0.9891;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 233987306 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.715;LDAF=0.0025;AVGPOST=0.9978;RSQ=0.6632;ERATE=0.0005;THETA=0.0029;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233987332 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9218;ERATE=0.0002;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233987433 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.741;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8388;ERATE=0.0002;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233987535 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233987565 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6497;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233987588 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0477;AVGPOST=0.9978;RSQ=0.9811;ERATE=0.0004;THETA=0.0023;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 233987595 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0345;AVGPOST=0.9994;RSQ=0.9924;ERATE=0.0002;THETA=0.0008;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 233987602 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.735;LDAF=0.0023;AVGPOST=0.9995;RSQ=0.9096;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233987606 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1315;AVGPOST=0.9973;RSQ=0.9906;ERATE=0.0005;THETA=0.0027;AC=286;AN=2184 GT:DS:GL:BD 0.13095239 0
1 233987771 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0109;AVGPOST=0.9993;RSQ=0.9706;ERATE=0.0003;THETA=0.0007;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 233987774 . ATTCT A 1765 PASS INDEL;BAVGPOST=0.996;BRSQ=0.920;LDAF=0.0128;AVGPOST=0.9984;RSQ=0.9462;ERATE=0.0003;THETA=0.0007;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 233987866 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0065;AVGPOST=0.9989;RSQ=0.9329;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 233987890 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9455;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233988285 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1881;AVGPOST=0.9984;RSQ=0.9959;ERATE=0.0003;THETA=0.0006;AC=411;AN=2184 GT:DS:GL:BD 0.18818681 0
1 233988319 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5492;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233988320 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7928;ERATE=0.0002;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233988328 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0520;AVGPOST=0.9986;RSQ=0.9886;ERATE=0.0003;THETA=0.0009;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 233988340 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7347;ERATE=0.0002;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233988366 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6903;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233988394 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1311;AVGPOST=0.9988;RSQ=0.9958;ERATE=0.0004;THETA=0.0016;AC=286;AN=2184 GT:DS:GL:BD 0.13095239 0
1 233988497 . C CA 164 PASS INDEL;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0038;AVGPOST=0.9978;RSQ=0.8112;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233988508 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233988524 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6678;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233988569 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7298;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233988592 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233988719 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8497;ERATE=0.0002;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233989049 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6122;ERATE=0.0002;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233989134 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1311;AVGPOST=0.9990;RSQ=0.9966;ERATE=0.0003;THETA=0.0012;AC=286;AN=2184 GT:DS:GL:BD 0.13095239 0
1 233989140 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.6946;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233989147 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233989200 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0015;AVGPOST=0.9982;RSQ=0.6289;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233989205 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0018;AVGPOST=0.9987;RSQ=0.7315;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233989231 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.840;LDAF=0.0041;AVGPOST=0.9996;RSQ=0.9540;ERATE=0.0002;THETA=0.0013;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233989245 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.780;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8441;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233989285 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.643;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7031;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233989311 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.3938;AVGPOST=0.9839;RSQ=0.9731;ERATE=0.0019;THETA=0.0002;AC=861;AN=2184 GT:DS:GL:BD 0.39423078 0
1 233989331 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.740;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5763;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233989334 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0068;AVGPOST=0.9979;RSQ=0.8503;ERATE=0.0005;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 233989347 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0120;AVGPOST=0.9973;RSQ=0.9134;ERATE=0.0006;THETA=0.0010;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 233989401 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.5726;ERATE=0.0002;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233989409 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5149;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233989519 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6927;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233989594 . CA C 131 PASS INDEL;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9465;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233989597 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0045;AVGPOST=0.9991;RSQ=0.9289;ERATE=0.0002;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233989642 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.982;LDAF=0.1307;AVGPOST=0.9984;RSQ=0.9944;ERATE=0.0005;THETA=0.0005;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 233989655 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0019;AVGPOST=0.9971;RSQ=0.4092;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233989733 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6141;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233989807 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.705;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6282;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233989888 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.953;LDAF=0.0324;AVGPOST=0.9988;RSQ=0.9826;ERATE=0.0005;THETA=0.0007;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 233989952 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0042;AVGPOST=0.9995;RSQ=0.9501;ERATE=0.0002;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233989953 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7303;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233990249 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.894;LDAF=0.0044;AVGPOST=0.9989;RSQ=0.9151;ERATE=0.0002;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233990325 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233990378 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233990456 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233990546 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.757;LDAF=0.0013;AVGPOST=0.9994;RSQ=0.8320;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233990566 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0316;AVGPOST=0.9998;RSQ=0.9967;ERATE=0.0002;THETA=0.0005;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 233990775 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9013;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233990908 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5240;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233990972 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8360;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233991001 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6114;AVGPOST=0.9968;RSQ=0.9950;ERATE=0.0003;THETA=0.0005;AC=1332;AN=2184 GT:DS:GL:BD 0.60989010 1
1 233991023 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233991050 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3680;AVGPOST=0.9984;RSQ=0.9971;ERATE=0.0004;THETA=0.0010;AC=802;AN=2184 GT:DS:GL:BD 0.36721611 0
1 233991064 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233991075 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0027;AVGPOST=0.9994;RSQ=0.8978;ERATE=0.0003;THETA=0.0014;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233991212 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0050;AVGPOST=0.9987;RSQ=0.8899;ERATE=0.0004;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 233991252 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6493;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233991420 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0416;AVGPOST=1.0000;RSQ=0.9995;ERATE=0.0002;THETA=0.0004;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 233991470 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8549;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233991489 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0473;AVGPOST=0.9994;RSQ=0.9936;ERATE=0.0003;THETA=0.0002;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 233991579 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0109;AVGPOST=0.9989;RSQ=0.9583;ERATE=0.0003;THETA=0.0010;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 233991725 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0316;AVGPOST=0.9999;RSQ=0.9980;ERATE=0.0002;THETA=0.0009;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 233991748 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9359;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233991766 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0315;AVGPOST=0.9997;RSQ=0.9957;ERATE=0.0002;THETA=0.0003;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 233991802 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0001;AVGPOST=0.9999;RSQ=0.0499;ERATE=0.0003;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 233991803 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6197;ERATE=0.0005;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233991847 rs34387179 T TCA 78950 PASS INDEL;BAVGPOST=0.975;BRSQ=0.958;LDAF=0.6082;AVGPOST=0.9798;RSQ=0.9713;ERATE=0.0005;THETA=0.0005;AC=1333;AN=2184 GT:DS:GL:BD 0.61034799 1
1 233991848 rs67630687 C CAT 22483 PASS INDEL;BAVGPOST=0.967;BRSQ=0.939;LDAF=0.5886;AVGPOST=0.9530;RSQ=0.9318;ERATE=0.0059;THETA=0.0003;AC=1300;AN=2184 GT:DS:GL:BD 0.59523809 1
1 233991849 rs72515907 A ACG 34232 PASS INDEL;BAVGPOST=0.968;BRSQ=0.941;LDAF=0.5913;AVGPOST=0.9553;RSQ=0.9350;ERATE=0.0063;THETA=0.0005;AC=1304;AN=2184 GT:DS:GL:BD 0.59706962 1
1 233991850 rs36073365 C CA 12287 PASS INDEL;BAVGPOST=0.939;BRSQ=0.883;LDAF=0.5150;AVGPOST=0.8824;RSQ=0.8186;ERATE=0.0426;THETA=0.0003;AC=1161;AN=2184 GT:DS:GL:BD 0.53159338 1
1 233991863 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0415;AVGPOST=0.9996;RSQ=0.9965;ERATE=0.0002;THETA=0.0009;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 233991989 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0141;AVGPOST=0.9992;RSQ=0.9762;ERATE=0.0002;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 233991990 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8742;ERATE=0.0003;THETA=0.0017;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233991998 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233992112 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.873;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7960;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233992129 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0101;AVGPOST=0.9998;RSQ=0.9913;ERATE=0.0003;THETA=0.0008;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 233992130 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1319;AVGPOST=0.9984;RSQ=0.9944;ERATE=0.0004;THETA=0.0004;AC=287;AN=2184 GT:DS:GL:BD 0.13141026 0
1 233992342 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9890;ERATE=0.0002;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 233992359 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233992402 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7813;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233992410 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0413;AVGPOST=0.9994;RSQ=0.9930;ERATE=0.0003;THETA=0.0003;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 233992477 . GTA G 7680 PASS INDEL;BAVGPOST=0.996;BRSQ=0.977;LDAF=0.0802;AVGPOST=0.9977;RSQ=0.9876;ERATE=0.0006;THETA=0.0003;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 233992512 . CAT C 293 PASS INDEL;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.8898;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233992778 . C CAT 26 PASS INDEL;BAVGPOST=1.000;BRSQ=0.723;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.5841;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233992812 . A AT 173 PASS INDEL;BAVGPOST=0.999;BRSQ=0.824;LDAF=0.0038;AVGPOST=0.9979;RSQ=0.7718;ERATE=0.0006;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233992966 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1237;AVGPOST=0.9933;RSQ=0.9775;ERATE=0.0005;THETA=0.0011;AC=268;AN=2184 GT:DS:GL:BD 0.12271062 0
1 233992967 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6798;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233993010 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5154;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233993019 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0015;AVGPOST=0.9985;RSQ=0.6310;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233993055 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7379;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233993162 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.764;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8368;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233993226 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0572;AVGPOST=0.9996;RSQ=0.9972;ERATE=0.0002;THETA=0.0002;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 233993248 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6683;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233993254 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7052;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233993274 . G GA 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.7095;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233993324 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233993427 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.689;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7529;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233993482 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0316;AVGPOST=0.9999;RSQ=0.9980;ERATE=0.0002;THETA=0.0004;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 233993503 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7303;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233993533 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9895;ERATE=0.0002;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233993546 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0041;AVGPOST=0.9997;RSQ=0.9642;ERATE=0.0002;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233993612 rs35351489 TAA T 9525 PASS INDEL;BAVGPOST=0.996;BRSQ=0.970;LDAF=0.0603;AVGPOST=0.9993;RSQ=0.9950;ERATE=0.0003;THETA=0.0003;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 233993636 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0026;AVGPOST=0.9996;RSQ=0.9296;ERATE=0.0002;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233993694 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0805;AVGPOST=0.9997;RSQ=0.9981;ERATE=0.0003;THETA=0.0006;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 233993771 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8476;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233993786 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233993808 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0413;AVGPOST=0.9997;RSQ=0.9968;ERATE=0.0003;THETA=0.0008;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 233993810 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0159;AVGPOST=0.9992;RSQ=0.9804;ERATE=0.0002;THETA=0.0001;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 233993871 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1836;AVGPOST=0.9993;RSQ=0.9984;ERATE=0.0003;THETA=0.0002;AC=400;AN=2184 GT:DS:GL:BD 0.18315019 0
1 233993917 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.1054;AVGPOST=0.9987;RSQ=0.9949;ERATE=0.0003;THETA=0.0005;AC=229;AN=2184 GT:DS:GL:BD 0.10485348 0
1 233993929 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0471;AVGPOST=0.9998;RSQ=0.9976;ERATE=0.0002;THETA=0.0003;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 233993931 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0949;AVGPOST=0.9992;RSQ=0.9964;ERATE=0.0003;THETA=0.0028;AC=206;AN=2184 GT:DS:GL:BD 0.09432235 0
1 233994000 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.6106;AVGPOST=0.9973;RSQ=0.9953;ERATE=0.0004;THETA=0.0002;AC=1332;AN=2184 GT:DS:GL:BD 0.60989010 1
1 233994073 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0027;AVGPOST=0.9999;RSQ=0.9841;ERATE=0.0002;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233994332 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7891;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233994373 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5611;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233994392 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0083;AVGPOST=0.9993;RSQ=0.9635;ERATE=0.0003;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 233994538 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.931;LDAF=0.0113;AVGPOST=0.9983;RSQ=0.9445;ERATE=0.0002;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 233994571 . TG T 367 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9147;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233994577 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233994671 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233994706 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0040;AVGPOST=0.9997;RSQ=0.9731;ERATE=0.0002;THETA=0.0017;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233994769 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0034;AVGPOST=0.9991;RSQ=0.8776;ERATE=0.0007;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233994791 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.9122;ERATE=0.0002;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233994811 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8315;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233994895 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0038;AVGPOST=0.9988;RSQ=0.9047;ERATE=0.0007;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233994949 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7842;ERATE=0.0002;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233994992 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0045;AVGPOST=0.9992;RSQ=0.9198;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233995053 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0295;AVGPOST=0.9992;RSQ=0.9893;ERATE=0.0002;THETA=0.0004;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 233995141 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233995150 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1058;AVGPOST=0.9988;RSQ=0.9944;ERATE=0.0004;THETA=0.0001;AC=231;AN=2184 GT:DS:GL:BD 0.10576923 0
1 233995199 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0105;AVGPOST=0.9999;RSQ=0.9958;ERATE=0.0002;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 233995263 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.8078;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233995425 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5934;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233995465 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0059;AVGPOST=0.9989;RSQ=0.9369;ERATE=0.0002;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 233995522 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0119;AVGPOST=0.9997;RSQ=0.9889;ERATE=0.0003;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 233995555 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.6172;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233995721 . T TC 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233995724 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1058;AVGPOST=0.9995;RSQ=0.9978;ERATE=0.0002;THETA=0.0004;AC=231;AN=2184 GT:DS:GL:BD 0.10576923 0
1 233995733 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.5131;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233995812 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0039;AVGPOST=0.9989;RSQ=0.8957;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233995918 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5049;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233996032 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.9045;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233996047 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6457;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233996143 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.7005;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233996167 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.722;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233996258 rs72164106 TTTTTTG T 34747 PASS INDEL;BAVGPOST=0.960;BRSQ=0.926;LDAF=0.4535;AVGPOST=0.9668;RSQ=0.9500;ERATE=0.0053;THETA=0.0005;AC=999;AN=2184 GT:DS:GL:BD 0.45741758 0
1 233996327 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.892;LDAF=0.0075;AVGPOST=0.9951;RSQ=0.7637;ERATE=0.0006;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 233996328 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0039;AVGPOST=0.9984;RSQ=0.8116;ERATE=0.0004;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233996355 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0264;AVGPOST=0.9993;RSQ=0.9896;ERATE=0.0003;THETA=0.0003;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 233996390 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.689;LDAF=0.0048;AVGPOST=0.9975;RSQ=0.8058;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233996488 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.669;LDAF=0.0029;AVGPOST=0.9978;RSQ=0.6744;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233996509 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.690;LDAF=0.0015;AVGPOST=0.9977;RSQ=0.3678;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233996512 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.689;LDAF=0.0035;AVGPOST=0.9950;RSQ=0.4145;ERATE=0.0009;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233996513 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.665;LDAF=0.0027;AVGPOST=0.9955;RSQ=0.3449;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233996532 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.4651;AVGPOST=0.9951;RSQ=0.9918;ERATE=0.0005;THETA=0.0004;AC=1016;AN=2184 GT:DS:GL:BD 0.46520147 0
1 233996618 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233996710 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0538;AVGPOST=0.9994;RSQ=0.9958;ERATE=0.0002;THETA=0.0004;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 233996717 . GCAAGAAGAGCA G 2233 PASS INDEL;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0041;AVGPOST=0.9986;RSQ=0.8471;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233996781 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5932;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233996786 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7117;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233996787 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.699;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7497;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233996804 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.7786;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233996845 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0068;AVGPOST=0.9988;RSQ=0.9319;ERATE=0.0002;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 233996958 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233996968 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=0.9986;RSQ=0.8844;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233997000 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233997026 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0569;AVGPOST=0.9996;RSQ=0.9968;ERATE=0.0002;THETA=0.0003;AC=124;AN=2184 GT:DS:GL:BD 0.05677656 0
1 233997062 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0138;AVGPOST=0.9998;RSQ=0.9939;ERATE=0.0003;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 233997073 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7966;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233997216 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0142;AVGPOST=0.9999;RSQ=0.9956;ERATE=0.0003;THETA=0.0006;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 233997254 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0570;AVGPOST=0.9990;RSQ=0.9922;ERATE=0.0003;THETA=0.0004;AC=124;AN=2184 GT:DS:GL:BD 0.05677656 0
1 233997332 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7587;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233997359 . T TC 820 PASS INDEL;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0269;AVGPOST=0.9993;RSQ=0.9887;ERATE=0.0004;THETA=0.0010;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 233997378 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.982;LDAF=0.1171;AVGPOST=0.9967;RSQ=0.9870;ERATE=0.0003;THETA=0.0005;AC=258;AN=2184 GT:DS:GL:BD 0.11813187 0
1 233997667 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.5717;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233997733 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.745;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.5779;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233997752 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.931;LDAF=0.0119;AVGPOST=0.9975;RSQ=0.9102;ERATE=0.0004;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 233997764 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.578;LDAF=0.0016;AVGPOST=0.9982;RSQ=0.4837;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233997852 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0040;AVGPOST=0.9999;RSQ=0.9855;ERATE=0.0002;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233997870 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.4374;AVGPOST=0.9973;RSQ=0.9952;ERATE=0.0006;THETA=0.0011;AC=954;AN=2184 GT:DS:GL:BD 0.43681318 0
1 233998039 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7172;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233998067 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3591;AVGPOST=0.9971;RSQ=0.9945;ERATE=0.0008;THETA=0.0003;AC=783;AN=2184 GT:DS:GL:BD 0.35851648 0
1 233998112 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6708;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233998193 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0055;AVGPOST=0.9997;RSQ=0.9770;ERATE=0.0002;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 233998285 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233998343 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0018;AVGPOST=0.9996;RSQ=0.9122;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233998408 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0069;AVGPOST=0.9998;RSQ=0.9843;ERATE=0.0002;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 233998612 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0629;AVGPOST=0.9976;RSQ=0.9848;ERATE=0.0003;THETA=0.0002;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 233998872 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1089;AVGPOST=0.9998;RSQ=0.9991;ERATE=0.0002;THETA=0.0002;AC=238;AN=2184 GT:DS:GL:BD 0.10897436 0
1 233999134 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6043;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233999167 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1254;AVGPOST=0.9990;RSQ=0.9960;ERATE=0.0004;THETA=0.0034;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 233999207 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0226;AVGPOST=0.9992;RSQ=0.9840;ERATE=0.0003;THETA=0.0004;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 233999366 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8057;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233999377 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0523;AVGPOST=0.9993;RSQ=0.9933;ERATE=0.0004;THETA=0.0005;AC=114;AN=2184 GT:DS:GL:BD 0.05219780 0
1 233999380 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8303;ERATE=0.0005;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233999615 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.921;LDAF=0.0224;AVGPOST=0.9941;RSQ=0.8943;ERATE=0.0005;THETA=0.0001;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 233999656 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0061;AVGPOST=0.9984;RSQ=0.9046;ERATE=0.0002;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 233999657 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4920;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233999687 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9267;ERATE=0.0003;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233999830 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.904;LDAF=0.0118;AVGPOST=0.9985;RSQ=0.9496;ERATE=0.0002;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 233999944 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5722;AVGPOST=0.9980;RSQ=0.9969;ERATE=0.0003;THETA=0.0005;AC=1247;AN=2184 GT:DS:GL:BD 0.57097071 1
1 233999974 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1085;AVGPOST=0.9997;RSQ=0.9987;ERATE=0.0002;THETA=0.0002;AC=237;AN=2184 GT:DS:GL:BD 0.10851648 0
1 234000069 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6236;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234000155 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0258;AVGPOST=0.9993;RSQ=0.9873;ERATE=0.0005;THETA=0.0002;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 234000175 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.8843;ERATE=0.0005;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234000224 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9995;RSQ=0.9548;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234000257 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.986;LDAF=0.1688;AVGPOST=0.9953;RSQ=0.9870;ERATE=0.0004;THETA=0.0004;AC=369;AN=2184 GT:DS:GL:BD 0.16895604 0
1 234000270 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0257;AVGPOST=0.9997;RSQ=0.9950;ERATE=0.0003;THETA=0.0002;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 234000315 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8666;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234000390 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6817;ERATE=0.0003;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234000403 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234000416 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0065;AVGPOST=0.9997;RSQ=0.9798;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234000555 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0027;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234000561 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0060;AVGPOST=0.9998;RSQ=0.9817;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234000565 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5965;AVGPOST=0.9980;RSQ=0.9964;ERATE=0.0004;THETA=0.0002;AC=1301;AN=2184 GT:DS:GL:BD 0.59569597 1
1 234000566 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8278;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234000759 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0522;AVGPOST=0.9998;RSQ=0.9979;ERATE=0.0002;THETA=0.0003;AC=114;AN=2184 GT:DS:GL:BD 0.05219780 0
1 234000760 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7951;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234000813 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.726;LDAF=0.0035;AVGPOST=0.9979;RSQ=0.7645;ERATE=0.0004;THETA=0.0001;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234000883 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1371;AVGPOST=0.9987;RSQ=0.9955;ERATE=0.0004;THETA=0.0002;AC=299;AN=2184 GT:DS:GL:BD 0.13690476 0
1 234000931 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1367;AVGPOST=0.9995;RSQ=0.9980;ERATE=0.0004;THETA=0.0002;AC=299;AN=2184 GT:DS:GL:BD 0.13690476 0
1 234000957 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8708;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234000983 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0531;AVGPOST=0.9980;RSQ=0.9866;ERATE=0.0003;THETA=0.0005;AC=114;AN=2184 GT:DS:GL:BD 0.05219780 0
1 234001016 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.6457;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234001077 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.846;LDAF=0.0050;AVGPOST=0.9982;RSQ=0.8639;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234001137 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5897;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234001270 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0172;AVGPOST=0.9993;RSQ=0.9826;ERATE=0.0003;THETA=0.0004;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 234001304 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0260;AVGPOST=0.9993;RSQ=0.9885;ERATE=0.0002;THETA=0.0004;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 234001341 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0081;AVGPOST=0.9975;RSQ=0.8703;ERATE=0.0010;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234001639 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0051;AVGPOST=0.9995;RSQ=0.9540;ERATE=0.0002;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234001645 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7143;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234001732 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.5724;AVGPOST=0.9963;RSQ=0.9947;ERATE=0.0005;THETA=0.0020;AC=1249;AN=2184 GT:DS:GL:BD 0.57188642 1
1 234001810 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5720;AVGPOST=0.9991;RSQ=0.9986;ERATE=0.0003;THETA=0.0005;AC=1248;AN=2184 GT:DS:GL:BD 0.57142860 1
1 234001857 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0522;AVGPOST=0.9999;RSQ=0.9987;ERATE=0.0002;THETA=0.0002;AC=114;AN=2184 GT:DS:GL:BD 0.05219780 0
1 234001885 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0064;AVGPOST=0.9995;RSQ=0.9665;ERATE=0.0002;THETA=0.0001;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234001943 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0050;AVGPOST=0.9967;RSQ=0.7475;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234001994 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.617;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5846;ERATE=0.0002;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234002036 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0091;AVGPOST=0.9976;RSQ=0.8974;ERATE=0.0007;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234002122 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0785;AVGPOST=0.9987;RSQ=0.9926;ERATE=0.0003;THETA=0.0002;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 234002267 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0059;AVGPOST=0.9992;RSQ=0.9431;ERATE=0.0002;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234002326 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.989;LDAF=0.4425;AVGPOST=0.9973;RSQ=0.9954;ERATE=0.0007;THETA=0.0004;AC=964;AN=2184 GT:DS:GL:BD 0.44139194 0
1 234002328 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0112;AVGPOST=0.9991;RSQ=0.9673;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234002550 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.835;LDAF=0.0035;AVGPOST=0.9985;RSQ=0.8275;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234002559 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6633;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234002594 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9799;ERATE=0.0002;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234002615 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9426;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234002647 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0522;AVGPOST=0.9997;RSQ=0.9975;ERATE=0.0003;THETA=0.0001;AC=114;AN=2184 GT:DS:GL:BD 0.05219780 0
1 234002650 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.4368;AVGPOST=0.9938;RSQ=0.9903;ERATE=0.0014;THETA=0.0002;AC=956;AN=2184 GT:DS:GL:BD 0.43772894 0
1 234002658 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6674;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234002685 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0072;AVGPOST=0.9995;RSQ=0.9689;ERATE=0.0002;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234002693 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5900;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234002709 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.4904;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234002781 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9179;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234002787 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0782;AVGPOST=0.9994;RSQ=0.9964;ERATE=0.0003;THETA=0.0001;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 234002872 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234003025 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0540;AVGPOST=0.9984;RSQ=0.9897;ERATE=0.0004;THETA=0.0002;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 234003086 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0532;AVGPOST=0.9978;RSQ=0.9810;ERATE=0.0004;THETA=0.0002;AC=114;AN=2184 GT:DS:GL:BD 0.05219780 0
1 234003236 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5722;AVGPOST=0.9947;RSQ=0.9912;ERATE=0.0009;THETA=0.0002;AC=1247;AN=2184 GT:DS:GL:BD 0.57097071 1
1 234003366 . TC T 330 PASS INDEL;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0034;AVGPOST=0.9987;RSQ=0.8258;ERATE=0.0006;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234003393 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7478;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234003409 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.886;LDAF=0.0192;AVGPOST=0.9955;RSQ=0.9122;ERATE=0.0002;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 234003446 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.596;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6897;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234003462 . TG T 147 PASS INDEL;BAVGPOST=0.980;BRSQ=0.538;LDAF=0.0301;AVGPOST=0.9676;RSQ=0.5872;ERATE=0.0070;THETA=0.0001;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 234003480 . G GT 1655 PASS INDEL;BAVGPOST=0.943;BRSQ=0.675;LDAF=0.1200;AVGPOST=0.9043;RSQ=0.6485;ERATE=0.0228;THETA=0.0002;AC=209;AN=2184 GT:DS:GL:BD 0.09569597 0
1 234003574 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.661;LDAF=0.0035;AVGPOST=0.9948;RSQ=0.4481;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234003727 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9107;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234003740 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0154;AVGPOST=0.9986;RSQ=0.9693;ERATE=0.0003;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 234003748 . AC A 53 PASS INDEL;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5785;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234003767 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.788;LDAF=0.0035;AVGPOST=0.9976;RSQ=0.7216;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234003814 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4355;AVGPOST=0.9976;RSQ=0.9961;ERATE=0.0004;THETA=0.0004;AC=950;AN=2184 GT:DS:GL:BD 0.43498167 0
1 234003828 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234004008 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0030;AVGPOST=0.9985;RSQ=0.8279;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234004062 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234004098 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.747;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7149;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234004113 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=0.9993;RSQ=0.9555;ERATE=0.0003;THETA=0.0008;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234004360 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9691;ERATE=0.0002;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234004533 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234004586 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.7008;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234004601 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7960;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234004602 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.752;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5797;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234004676 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5918;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234004705 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0063;AVGPOST=0.9994;RSQ=0.9644;ERATE=0.0002;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234004871 . G GCT 1187 PASS INDEL;BAVGPOST=0.999;BRSQ=0.880;LDAF=0.0061;AVGPOST=0.9988;RSQ=0.9032;ERATE=0.0005;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234004902 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0018;AVGPOST=0.9988;RSQ=0.7144;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234004960 . ACT A 759 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0066;AVGPOST=0.9991;RSQ=0.9392;ERATE=0.0004;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234005105 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.717;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4827;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234005365 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0086;AVGPOST=0.9993;RSQ=0.9654;ERATE=0.0003;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 234005448 . T TATGG 7288 PASS INDEL;BAVGPOST=0.865;BRSQ=0.710;LDAF=0.3913;AVGPOST=0.8312;RSQ=0.6846;ERATE=0.0985;THETA=0.0002;AC=821;AN=2184 GT:DS:GL:BD 0.37591577 0
1 234005454 rs71297714 T TAGAC 78584 PASS INDEL;BAVGPOST=0.993;BRSQ=0.987;LDAF=0.5623;AVGPOST=0.9749;RSQ=0.9619;ERATE=0.0053;THETA=0.0004;AC=1235;AN=2184 GT:DS:GL:BD 0.56547618 1
1 234005485 . T TA 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6558;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234005488 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.7993;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234005511 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.694;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234005604 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9366;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234005615 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7148;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234005715 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234005783 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.760;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7458;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234006011 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.7008;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234006039 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9220;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234006056 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9614;ERATE=0.0002;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234006112 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.5794;AVGPOST=0.9966;RSQ=0.9945;ERATE=0.0015;THETA=0.0004;AC=1264;AN=2184 GT:DS:GL:BD 0.57875460 1
1 234006177 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6686;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234006228 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.646;LDAF=0.0036;AVGPOST=0.9979;RSQ=0.7454;ERATE=0.0007;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234006309 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7262;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234006409 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.985;LDAF=0.0824;AVGPOST=0.9982;RSQ=0.9914;ERATE=0.0005;THETA=0.0007;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 234006457 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0023;AVGPOST=0.9984;RSQ=0.7215;ERATE=0.0006;THETA=0.0017;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234006482 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0412;AVGPOST=0.9989;RSQ=0.9894;ERATE=0.0003;THETA=0.0008;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 234006540 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.727;LDAF=0.0036;AVGPOST=0.9976;RSQ=0.7302;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234006702 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0057;AVGPOST=0.9979;RSQ=0.8612;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234006768 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.8059;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234006798 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234006924 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0106;AVGPOST=0.9999;RSQ=0.9937;ERATE=0.0002;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234006931 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234006938 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234007015 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0107;AVGPOST=0.9995;RSQ=0.9772;ERATE=0.0004;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234007151 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234007233 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4367;AVGPOST=0.9977;RSQ=0.9966;ERATE=0.0003;THETA=0.0002;AC=951;AN=2184 GT:DS:GL:BD 0.43543956 0
1 234007244 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0027;AVGPOST=0.9975;RSQ=0.6253;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234007354 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.7343;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234007414 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.6062;AVGPOST=0.9995;RSQ=0.9990;ERATE=0.0004;THETA=0.0004;AC=1322;AN=2184 GT:DS:GL:BD 0.60531133 1
1 234007514 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.1698;AVGPOST=0.9959;RSQ=0.9898;ERATE=0.0004;THETA=0.0008;AC=370;AN=2184 GT:DS:GL:BD 0.16941392 0
1 234007532 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7317;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234007563 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7290;ERATE=0.0003;THETA=0.0046;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234007601 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0066;AVGPOST=0.9984;RSQ=0.9114;ERATE=0.0003;THETA=0.0084;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234007601 . A AT 16 PASS INDEL;BAVGPOST=0.999;BRSQ=0.724;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234007728 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8006;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234007775 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8645;ERATE=0.0004;THETA=0.0001;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234007827 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.764;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8561;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234007929 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7337;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234007964 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.667;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.6956;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234008049 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0066;AVGPOST=0.9987;RSQ=0.9233;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234008132 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7653;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234008207 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=0.9999;RSQ=0.0499;ERATE=0.0002;THETA=0.0024;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 234008222 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0080;AVGPOST=0.9994;RSQ=0.9628;ERATE=0.0004;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 234008245 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0055;AVGPOST=0.9999;RSQ=0.9921;ERATE=0.0002;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234008249 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9277;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234008340 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6466;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234008364 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0079;AVGPOST=0.9990;RSQ=0.9451;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 234008522 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0047;AVGPOST=0.9988;RSQ=0.9037;ERATE=0.0002;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234008620 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.987;LDAF=0.5924;AVGPOST=0.9904;RSQ=0.9849;ERATE=0.0034;THETA=0.0005;AC=1291;AN=2184 GT:DS:GL:BD 0.59111720 1
1 234008630 . C CG 6452 PASS INDEL;BAVGPOST=0.993;BRSQ=0.943;LDAF=0.0667;AVGPOST=0.9930;RSQ=0.9561;ERATE=0.0009;THETA=0.0006;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 234008684 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.976;LDAF=0.3180;AVGPOST=0.9885;RSQ=0.9807;ERATE=0.0031;THETA=0.0062;AC=691;AN=2184 GT:DS:GL:BD 0.31639194 0
1 234008743 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.5654;AVGPOST=0.9962;RSQ=0.9941;ERATE=0.0008;THETA=0.0012;AC=1233;AN=2184 GT:DS:GL:BD 0.56456041 1
1 234008856 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.835;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8552;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234008886 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.849;LDAF=0.0096;AVGPOST=0.9952;RSQ=0.8158;ERATE=0.0005;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 234008928 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0074;AVGPOST=0.9995;RSQ=0.9675;ERATE=0.0002;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234008936 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5258;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234008963 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0045;AVGPOST=0.9955;RSQ=0.6676;ERATE=0.0004;THETA=0.0032;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234009048 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5592;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234009092 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234009147 . T TG 297 PASS INDEL;BAVGPOST=0.998;BRSQ=0.635;LDAF=0.0063;AVGPOST=0.9907;RSQ=0.3903;ERATE=0.0024;THETA=0.0026;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234009208 . T TG 85 PASS INDEL;BAVGPOST=1.000;BRSQ=0.700;LDAF=0.0028;AVGPOST=0.9958;RSQ=0.4592;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234009231 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.5923;AVGPOST=0.9912;RSQ=0.9862;ERATE=0.0009;THETA=0.0019;AC=1300;AN=2184 GT:DS:GL:BD 0.59523809 1
1 234009322 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6696;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234009530 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0125;AVGPOST=0.9995;RSQ=0.9844;ERATE=0.0002;THETA=0.0009;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 234009763 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1633;AVGPOST=0.9971;RSQ=0.9914;ERATE=0.0006;THETA=0.0005;AC=356;AN=2184 GT:DS:GL:BD 0.16300367 0
1 234009999 . AG A 95 PASS INDEL;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0045;AVGPOST=0.9969;RSQ=0.7261;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234010000 . GAGAA G 2880 PASS INDEL;BAVGPOST=0.985;BRSQ=0.839;LDAF=0.0322;AVGPOST=0.9929;RSQ=0.9192;ERATE=0.0003;THETA=0.0014;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 234010005 . AG A 100 PASS INDEL;BAVGPOST=0.990;BRSQ=0.468;LDAF=0.0160;AVGPOST=0.9869;RSQ=0.7076;ERATE=0.0008;THETA=0.0002;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 234010014 . G GA 143 PASS INDEL;BAVGPOST=0.995;BRSQ=0.729;LDAF=0.0121;AVGPOST=0.9863;RSQ=0.5693;ERATE=0.0019;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234010036 . GA G 522 PASS INDEL;BAVGPOST=0.992;BRSQ=0.828;LDAF=0.0241;AVGPOST=0.9936;RSQ=0.8894;ERATE=0.0006;THETA=0.0003;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 234010110 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0004;THETA=0.0028;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234010130 . GA G 335 PASS INDEL;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0091;AVGPOST=0.9953;RSQ=0.7902;ERATE=0.0007;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234010304 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0779;AVGPOST=0.9983;RSQ=0.9916;ERATE=0.0003;THETA=0.0002;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 234010345 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7739;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234010456 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7189;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234010468 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9614;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234010488 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6008;ERATE=0.0002;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234010489 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0071;AVGPOST=0.9990;RSQ=0.9519;ERATE=0.0003;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234010595 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0203;AVGPOST=0.9978;RSQ=0.9539;ERATE=0.0002;THETA=0.0005;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 234010822 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0635;AVGPOST=0.9989;RSQ=0.9926;ERATE=0.0003;THETA=0.0002;AC=138;AN=2184 GT:DS:GL:BD 0.06318682 0
1 234010924 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0110;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0001;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234011062 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7552;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234011119 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3552;AVGPOST=0.9968;RSQ=0.9945;ERATE=0.0004;THETA=0.0003;AC=777;AN=2184 GT:DS:GL:BD 0.35576922 0
1 234011148 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0073;AVGPOST=0.9992;RSQ=0.9483;ERATE=0.0004;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234011259 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9988;RSQ=0.9335;ERATE=0.0004;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234011378 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.5163;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234011436 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.5816;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234011442 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0029;AVGPOST=0.9966;RSQ=0.6142;ERATE=0.0004;THETA=0.0043;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234011464 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0390;AVGPOST=0.9996;RSQ=0.9951;ERATE=0.0002;THETA=0.0003;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 234011486 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0643;AVGPOST=0.9981;RSQ=0.9872;ERATE=0.0004;THETA=0.0006;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 234011496 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0151;AVGPOST=0.9994;RSQ=0.9857;ERATE=0.0002;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 234011497 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0639;AVGPOST=0.9988;RSQ=0.9916;ERATE=0.0004;THETA=0.0004;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 234011597 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.878;LDAF=0.0066;AVGPOST=0.9992;RSQ=0.9531;ERATE=0.0002;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234011611 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.9122;AVGPOST=0.9985;RSQ=0.9924;ERATE=0.0002;THETA=0.0007;AC=1992;AN=2184 GT:DS:GL:BD 0.91208792 1
1 234011612 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.971;LDAF=0.0630;AVGPOST=0.9971;RSQ=0.9826;ERATE=0.0004;THETA=0.0003;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 234011659 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.6380;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234011694 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7530;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234011729 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.786;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7166;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234011818 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0011;AVGPOST=0.9979;RSQ=0.2545;ERATE=0.0002;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 234011839 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.922;LDAF=0.0205;AVGPOST=0.9967;RSQ=0.9394;ERATE=0.0003;THETA=0.0002;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 234012021 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8541;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234012153 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.676;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234012217 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6941;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234012276 . G GGAGT 156 PASS INDEL;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6889;ERATE=0.0003;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234012348 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234012484 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0643;AVGPOST=0.9987;RSQ=0.9909;ERATE=0.0003;THETA=0.0004;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 234012549 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.5052;AVGPOST=0.9970;RSQ=0.9953;ERATE=0.0006;THETA=0.0004;AC=1103;AN=2184 GT:DS:GL:BD 0.50503665 1
1 234012557 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234012660 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0115;AVGPOST=0.9994;RSQ=0.9782;ERATE=0.0002;THETA=0.0008;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 234012764 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.7629;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234012784 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6066;AVGPOST=0.9984;RSQ=0.9972;ERATE=0.0004;THETA=0.0002;AC=1325;AN=2184 GT:DS:GL:BD 0.60668498 1
1 234012804 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0092;AVGPOST=1.0000;RSQ=0.9976;ERATE=0.0002;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234012840 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0120;AVGPOST=0.9986;RSQ=0.9635;ERATE=0.0002;THETA=0.0002;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 234012893 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3288;AVGPOST=0.9988;RSQ=0.9977;ERATE=0.0004;THETA=0.0002;AC=718;AN=2184 GT:DS:GL:BD 0.32875457 0
1 234012976 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0644;AVGPOST=0.9996;RSQ=0.9974;ERATE=0.0002;THETA=0.0001;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 234013005 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0638;AVGPOST=0.9991;RSQ=0.9930;ERATE=0.0005;THETA=0.0002;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 234013100 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7756;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234013288 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.5842;AVGPOST=0.9988;RSQ=0.9978;ERATE=0.0005;THETA=0.0001;AC=1276;AN=2184 GT:DS:GL:BD 0.58424908 1
1 234013431 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0037;AVGPOST=0.9985;RSQ=0.8408;ERATE=0.0005;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234013503 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6834;AVGPOST=0.9961;RSQ=0.9927;ERATE=0.0010;THETA=0.0004;AC=1493;AN=2184 GT:DS:GL:BD 0.68360806 1
1 234013725 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0050;AVGPOST=0.9994;RSQ=0.9514;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234013754 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234013795 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0638;AVGPOST=0.9995;RSQ=0.9953;ERATE=0.0003;THETA=0.0003;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 234013890 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0049;AVGPOST=0.9995;RSQ=0.9598;ERATE=0.0002;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234014024 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0074;AVGPOST=0.9989;RSQ=0.9383;ERATE=0.0003;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234014079 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0028;AVGPOST=0.9976;RSQ=0.6695;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234014137 . G GTA 182 PASS INDEL;BAVGPOST=0.995;BRSQ=0.590;LDAF=0.0227;AVGPOST=0.9739;RSQ=0.5575;ERATE=0.0032;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 234014157 . TAC T 2678 PASS INDEL;BAVGPOST=0.902;BRSQ=0.599;LDAF=0.2028;AVGPOST=0.8027;RSQ=0.4944;ERATE=0.0543;THETA=0.0005;AC=296;AN=2184 GT:DS:GL:BD 0.13553114 0
1 234014169 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.986;LDAF=0.6790;AVGPOST=0.9678;RSQ=0.9463;ERATE=0.0030;THETA=0.0002;AC=1482;AN=2184 GT:DS:GL:BD 0.67857140 1
1 234014215 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.954;LDAF=0.5668;AVGPOST=0.9626;RSQ=0.9439;ERATE=0.0055;THETA=0.0004;AC=1246;AN=2184 GT:DS:GL:BD 0.57051283 1
1 234014277 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5677;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234014288 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.6186;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234014469 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6340;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234014549 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.833;LDAF=0.0139;AVGPOST=0.9947;RSQ=0.8354;ERATE=0.0005;THETA=0.0007;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 234014550 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0018;AVGPOST=0.9986;RSQ=0.6754;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234014559 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.9117;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234014621 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1624;AVGPOST=0.9987;RSQ=0.9958;ERATE=0.0004;THETA=0.0002;AC=355;AN=2184 GT:DS:GL:BD 0.16254579 0
1 234014761 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0137;AVGPOST=0.9996;RSQ=0.9875;ERATE=0.0002;THETA=0.0002;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 234014770 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9282;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234014807 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9576;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234014873 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6777;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234015037 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0035;AVGPOST=0.9991;RSQ=0.8960;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234015085 . GATAC G 232 PASS INDEL;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7286;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234015111 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.997;LDAF=0.3296;AVGPOST=0.9990;RSQ=0.9983;ERATE=0.0003;THETA=0.0003;AC=719;AN=2184 GT:DS:GL:BD 0.32921246 0
1 234015244 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7129;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234015286 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.846;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4793;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234015344 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6983;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234015397 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8406;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234015628 . CATA C 18 PASS INDEL;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5018;ERATE=0.0002;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234015665 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3295;AVGPOST=0.9976;RSQ=0.9956;ERATE=0.0005;THETA=0.0002;AC=719;AN=2184 GT:DS:GL:BD 0.32921246 0
1 234015682 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.674;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8448;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234015875 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0391;AVGPOST=0.9993;RSQ=0.9920;ERATE=0.0004;THETA=0.0002;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 234015966 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234016049 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1632;AVGPOST=0.9995;RSQ=0.9982;ERATE=0.0003;THETA=0.0002;AC=357;AN=2184 GT:DS:GL:BD 0.16346154 0
1 234016287 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.909;LDAF=0.0109;AVGPOST=0.9971;RSQ=0.9057;ERATE=0.0002;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234016310 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.1675;AVGPOST=0.9976;RSQ=0.9934;ERATE=0.0004;THETA=0.0003;AC=365;AN=2184 GT:DS:GL:BD 0.16712454 0
1 234016318 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234016499 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1445;AVGPOST=0.9961;RSQ=0.9883;ERATE=0.0004;THETA=0.0002;AC=315;AN=2184 GT:DS:GL:BD 0.14423077 0
1 234016667 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5048;AVGPOST=0.9991;RSQ=0.9984;ERATE=0.0003;THETA=0.0003;AC=1103;AN=2184 GT:DS:GL:BD 0.50503665 1
1 234016759 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0120;AVGPOST=0.9995;RSQ=0.9786;ERATE=0.0003;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 234016958 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5594;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234016959 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8057;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234017052 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0636;AVGPOST=0.9997;RSQ=0.9976;ERATE=0.0002;THETA=0.0003;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 234017069 . GTC G 153 PASS INDEL;BAVGPOST=0.988;BRSQ=0.666;LDAF=0.0319;AVGPOST=0.9690;RSQ=0.5894;ERATE=0.0139;THETA=0.0003;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 234017103 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234017139 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0037;AVGPOST=0.9988;RSQ=0.8841;ERATE=0.0002;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234017163 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8470;ERATE=0.0002;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234017212 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0644;AVGPOST=0.9984;RSQ=0.9884;ERATE=0.0003;THETA=0.0002;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 234017288 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0110;AVGPOST=0.9999;RSQ=0.9940;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234017364 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6968;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234017659 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.987;LDAF=0.0378;AVGPOST=0.9988;RSQ=0.9862;ERATE=0.0003;THETA=0.0003;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 234017713 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0636;AVGPOST=0.9997;RSQ=0.9978;ERATE=0.0002;THETA=0.0001;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 234017719 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.988;LDAF=0.1627;AVGPOST=0.9985;RSQ=0.9955;ERATE=0.0004;THETA=0.0004;AC=357;AN=2184 GT:DS:GL:BD 0.16346154 0
1 234017741 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.598;LDAF=0.0220;AVGPOST=0.9737;RSQ=0.5437;ERATE=0.0062;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 234017784 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.5935;AVGPOST=0.9830;RSQ=0.9748;ERATE=0.0042;THETA=0.0003;AC=1304;AN=2184 GT:DS:GL:BD 0.59706962 1
1 234017904 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7102;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234017926 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234017970 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0004;AVGPOST=0.9997;RSQ=0.7164;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234018017 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0629;AVGPOST=0.9991;RSQ=0.9937;ERATE=0.0003;THETA=0.0001;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 234018071 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234018142 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9994;RSQ=0.9391;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234018179 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5169;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234018201 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0120;AVGPOST=0.9980;RSQ=0.9309;ERATE=0.0003;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 234018218 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.977;LDAF=0.3273;AVGPOST=0.9835;RSQ=0.9738;ERATE=0.0022;THETA=0.0005;AC=717;AN=2184 GT:DS:GL:BD 0.32829669 0
1 234018307 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.941;LDAF=0.1609;AVGPOST=0.9930;RSQ=0.9826;ERATE=0.0004;THETA=0.0004;AC=353;AN=2184 GT:DS:GL:BD 0.16163003 0
1 234018330 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.956;LDAF=0.6865;AVGPOST=0.9944;RSQ=0.9894;ERATE=0.0008;THETA=0.0004;AC=1503;AN=2184 GT:DS:GL:BD 0.68818682 1
1 234018336 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4192;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234018415 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0627;AVGPOST=0.9987;RSQ=0.9896;ERATE=0.0006;THETA=0.0002;AC=136;AN=2184 GT:DS:GL:BD 0.06227106 0
1 234018518 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7992;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234018584 rs77320132 CT C 7391 PASS INDEL;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0632;AVGPOST=0.9982;RSQ=0.9884;ERATE=0.0003;THETA=0.0002;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 234018598 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0791;AVGPOST=0.9989;RSQ=0.9940;ERATE=0.0003;THETA=0.0003;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 234018606 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0162;AVGPOST=0.9986;RSQ=0.9699;ERATE=0.0003;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 234018636 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0035;AVGPOST=0.9992;RSQ=0.8970;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234018653 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6909;AVGPOST=0.9980;RSQ=0.9962;ERATE=0.0004;THETA=0.0003;AC=1507;AN=2184 GT:DS:GL:BD 0.69001830 1
1 234018694 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0053;AVGPOST=0.9976;RSQ=0.8718;ERATE=0.0003;THETA=0.0012;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234018721 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0039;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234019020 . G GTA 33027 PASS INDEL;BAVGPOST=0.982;BRSQ=0.967;LDAF=0.5119;AVGPOST=0.9898;RSQ=0.9847;ERATE=0.0008;THETA=0.0004;AC=1121;AN=2184 GT:DS:GL:BD 0.51327837 1
1 234019022 rs35289108 A ATG 73166 PASS INDEL;BAVGPOST=0.981;BRSQ=0.966;LDAF=0.5104;AVGPOST=0.9896;RSQ=0.9842;ERATE=0.0010;THETA=0.0003;AC=1120;AN=2184 GT:DS:GL:BD 0.51282054 1
1 234019023 rs66546618 T TGG 17926 PASS INDEL;BAVGPOST=0.969;BRSQ=0.944;LDAF=0.4701;AVGPOST=0.9547;RSQ=0.9345;ERATE=0.0096;THETA=0.0003;AC=1037;AN=2184 GT:DS:GL:BD 0.47481686 0
1 234019122 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.967;LDAF=0.0230;AVGPOST=0.9974;RSQ=0.9507;ERATE=0.0003;THETA=0.0005;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 234019138 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0049;AVGPOST=0.9994;RSQ=0.9377;ERATE=0.0005;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234019333 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0064;AVGPOST=0.9979;RSQ=0.8894;ERATE=0.0004;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234019353 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9914;ERATE=0.0002;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234019354 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0073;AVGPOST=0.9991;RSQ=0.9537;ERATE=0.0002;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234019363 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0636;AVGPOST=0.9999;RSQ=0.9990;ERATE=0.0002;THETA=0.0008;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 234019370 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0032;AVGPOST=0.9995;RSQ=0.9309;ERATE=0.0002;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234019392 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0049;AVGPOST=0.9995;RSQ=0.9654;ERATE=0.0002;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234019453 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7873;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234019533 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6911;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234019577 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0309;AVGPOST=0.9994;RSQ=0.9905;ERATE=0.0003;THETA=0.0003;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 234019659 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0641;AVGPOST=0.9991;RSQ=0.9952;ERATE=0.0002;THETA=0.0002;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 234019684 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0148;AVGPOST=0.9997;RSQ=0.9915;ERATE=0.0003;THETA=0.0001;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 234019703 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3283;AVGPOST=0.9953;RSQ=0.9922;ERATE=0.0012;THETA=0.0002;AC=716;AN=2184 GT:DS:GL:BD 0.32783884 0
1 234019723 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6533;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234019766 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6134;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234019867 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8296;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234019905 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.752;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7200;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234019961 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9890;ERATE=0.0002;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234019974 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.870;LDAF=0.0043;AVGPOST=0.9988;RSQ=0.8789;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234020118 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0122;AVGPOST=0.9987;RSQ=0.9595;ERATE=0.0002;THETA=0.0006;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 234020126 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0055;AVGPOST=1.0000;RSQ=0.9960;ERATE=0.0002;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234020153 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2011;AVGPOST=0.9990;RSQ=0.9973;ERATE=0.0005;THETA=0.0002;AC=438;AN=2184 GT:DS:GL:BD 0.20054945 0
1 234020195 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4924;AVGPOST=0.9989;RSQ=0.9982;ERATE=0.0003;THETA=0.0001;AC=1076;AN=2184 GT:DS:GL:BD 0.49267399 0
1 234020200 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6395;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234020230 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3296;AVGPOST=0.9990;RSQ=0.9983;ERATE=0.0002;THETA=0.0003;AC=719;AN=2184 GT:DS:GL:BD 0.32921246 0
1 234020253 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0291;AVGPOST=0.9991;RSQ=0.9876;ERATE=0.0004;THETA=0.0007;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 234020261 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.664;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.8120;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234020285 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5047;AVGPOST=0.9984;RSQ=0.9974;ERATE=0.0004;THETA=0.0004;AC=1103;AN=2184 GT:DS:GL:BD 0.50503665 1
1 234020305 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8435;ERATE=0.0004;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234020310 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7797;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234020481 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3315;AVGPOST=0.9974;RSQ=0.9957;ERATE=0.0004;THETA=0.0002;AC=723;AN=2184 GT:DS:GL:BD 0.33104396 0
1 234020676 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234020690 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4990;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234020740 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6527;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234020841 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5050;AVGPOST=0.9975;RSQ=0.9958;ERATE=0.0007;THETA=0.0002;AC=1103;AN=2184 GT:DS:GL:BD 0.50503665 1
1 234020880 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.904;LDAF=0.0101;AVGPOST=0.9968;RSQ=0.8843;ERATE=0.0005;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 234020884 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0043;AVGPOST=0.9984;RSQ=0.8610;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234020929 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8316;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234020943 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8864;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234020978 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6228;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234020981 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234021103 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7563;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234021139 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234021165 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6951;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234021298 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8376;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234021327 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234021333 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8493;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234021340 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234021388 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9914;ERATE=0.0002;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234021414 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7931;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234021506 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5802;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234021511 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.555;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4959;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234021539 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5686;AVGPOST=0.9953;RSQ=0.9926;ERATE=0.0013;THETA=0.0002;AC=1242;AN=2184 GT:DS:GL:BD 0.56868130 1
1 234021562 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234021629 . CAA C 151 PASS INDEL;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.7629;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234021841 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0002;AVGPOST=0.9995;RSQ=0.4097;ERATE=0.0002;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 234021978 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0118;AVGPOST=0.9996;RSQ=0.9879;ERATE=0.0002;THETA=0.0002;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 234022013 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5308;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234022078 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5446;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234022118 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.680;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6231;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234022204 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.810;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7269;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234022213 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.994;LDAF=0.2655;AVGPOST=0.9957;RSQ=0.9920;ERATE=0.0005;THETA=0.0004;AC=579;AN=2184 GT:DS:GL:BD 0.26510990 0
1 234022229 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.845;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6708;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234022243 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0636;AVGPOST=0.9993;RSQ=0.9947;ERATE=0.0003;THETA=0.0003;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 234022272 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.986;LDAF=0.4899;AVGPOST=0.9768;RSQ=0.9654;ERATE=0.0071;THETA=0.0002;AC=1066;AN=2184 GT:DS:GL:BD 0.48809522 0
1 234022533 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0026;AVGPOST=0.9982;RSQ=0.7245;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234022586 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0037;AVGPOST=0.9997;RSQ=0.9595;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234022710 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9931;AVGPOST=1.0000;RSQ=0.9968;ERATE=0.0002;THETA=0.0002;AC=2169;AN=2184 GT:DS:GL:BD 0.99313188 1
1 234022793 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0152;AVGPOST=0.9999;RSQ=0.9956;ERATE=0.0002;THETA=0.0006;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 234022827 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3220;AVGPOST=0.9988;RSQ=0.9977;ERATE=0.0005;THETA=0.0002;AC=702;AN=2184 GT:DS:GL:BD 0.32142857 0
1 234022926 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6213;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234022959 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9817;ERATE=0.0002;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234022989 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7375;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234022995 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234023131 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7408;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234023144 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5050;AVGPOST=0.9988;RSQ=0.9979;ERATE=0.0004;THETA=0.0003;AC=1103;AN=2184 GT:DS:GL:BD 0.50503665 1
1 234023174 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4865;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234023176 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234023234 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234023238 . TCA T 190 PASS INDEL;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6350;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234023433 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0151;AVGPOST=1.0000;RSQ=0.9985;ERATE=0.0002;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 234023535 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234023559 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0545;AVGPOST=0.9991;RSQ=0.9925;ERATE=0.0003;THETA=0.0004;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 234023638 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9658;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234023826 rs5781769 AT A 25601 PASS INDEL;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.3233;AVGPOST=0.9900;RSQ=0.9840;ERATE=0.0015;THETA=0.0002;AC=701;AN=2184 GT:DS:GL:BD 0.32097068 0
1 234023945 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0049;AVGPOST=0.9983;RSQ=0.8656;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234024002 . A AG 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7756;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234024126 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234024194 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0139;AVGPOST=0.9995;RSQ=0.9851;ERATE=0.0003;THETA=0.0001;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 234024195 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0052;AVGPOST=0.9996;RSQ=0.9665;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234024228 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0154;AVGPOST=0.9991;RSQ=0.9749;ERATE=0.0003;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 234024243 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0033;AVGPOST=0.9988;RSQ=0.8700;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234024305 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5050;AVGPOST=0.9996;RSQ=0.9993;ERATE=0.0003;THETA=0.0003;AC=1103;AN=2184 GT:DS:GL:BD 0.50503665 1
1 234024437 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.822;LDAF=0.0031;AVGPOST=0.9981;RSQ=0.7760;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234024474 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0091;AVGPOST=0.9998;RSQ=0.9886;ERATE=0.0002;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234024492 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0052;AVGPOST=0.9984;RSQ=0.8815;ERATE=0.0002;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234024500 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0117;AVGPOST=0.9995;RSQ=0.9835;ERATE=0.0003;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 234024549 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.5944;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234024559 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234024646 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.5708;AVGPOST=0.9930;RSQ=0.9889;ERATE=0.0016;THETA=0.0003;AC=1245;AN=2184 GT:DS:GL:BD 0.57005495 1
1 234024721 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0636;AVGPOST=0.9996;RSQ=0.9969;ERATE=0.0002;THETA=0.0005;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 234024791 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0389;AVGPOST=0.9998;RSQ=0.9979;ERATE=0.0002;THETA=0.0003;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 234024793 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6651;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234024841 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0031;AVGPOST=0.9984;RSQ=0.8010;ERATE=0.0007;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234024842 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.7905;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234024874 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234024891 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0636;AVGPOST=0.9992;RSQ=0.9945;ERATE=0.0003;THETA=0.0003;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 234024942 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.972;LDAF=0.5762;AVGPOST=0.9875;RSQ=0.9807;ERATE=0.0015;THETA=0.0004;AC=1263;AN=2184 GT:DS:GL:BD 0.57829672 1
1 234024963 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0056;AVGPOST=0.9999;RSQ=0.9881;ERATE=0.0002;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234024967 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.850;LDAF=0.0027;AVGPOST=0.9984;RSQ=0.7456;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234025066 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.649;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5264;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234025076 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234025086 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.5717;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234025103 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.899;LDAF=0.0156;AVGPOST=0.9996;RSQ=0.9890;ERATE=0.0003;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 234025222 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.624;LDAF=0.0073;AVGPOST=0.9937;RSQ=0.6791;ERATE=0.0014;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234025224 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.793;LDAF=0.0037;AVGPOST=0.9986;RSQ=0.8483;ERATE=0.0002;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234025263 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0027;AVGPOST=0.9988;RSQ=0.8247;ERATE=0.0006;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234025296 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8176;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234025326 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1759;AVGPOST=0.9966;RSQ=0.9911;ERATE=0.0005;THETA=0.0003;AC=383;AN=2184 GT:DS:GL:BD 0.17536630 0
1 234025415 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234025517 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6646;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234025538 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0022;AVGPOST=0.9971;RSQ=0.5449;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234025558 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7425;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234025696 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.9062;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234025747 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0051;AVGPOST=0.9977;RSQ=0.8385;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234025748 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234025790 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234025865 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.914;LDAF=0.0104;AVGPOST=0.9984;RSQ=0.9460;ERATE=0.0002;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234026172 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1725;AVGPOST=0.9986;RSQ=0.9961;ERATE=0.0005;THETA=0.0003;AC=377;AN=2184 GT:DS:GL:BD 0.17261904 0
1 234026202 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5784;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234026207 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7795;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234026302 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0052;AVGPOST=0.9997;RSQ=0.9704;ERATE=0.0003;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234026347 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0181;AVGPOST=0.9992;RSQ=0.9802;ERATE=0.0003;THETA=0.0004;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 234026367 . CT C 1517 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0107;AVGPOST=0.9987;RSQ=0.9563;ERATE=0.0003;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234026389 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234026449 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0139;AVGPOST=0.9996;RSQ=0.9864;ERATE=0.0004;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 234026492 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3219;AVGPOST=0.9959;RSQ=0.9931;ERATE=0.0004;THETA=0.0004;AC=701;AN=2184 GT:DS:GL:BD 0.32097068 0
1 234026501 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4929;AVGPOST=0.9963;RSQ=0.9943;ERATE=0.0005;THETA=0.0004;AC=1077;AN=2184 GT:DS:GL:BD 0.49313188 0
1 234026557 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9206;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234026582 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.6919;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234026585 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0660;AVGPOST=0.9995;RSQ=0.9966;ERATE=0.0003;THETA=0.0002;AC=144;AN=2184 GT:DS:GL:BD 0.06593407 0
1 234026721 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.762;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8575;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234026765 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0165;AVGPOST=0.9986;RSQ=0.9640;ERATE=0.0003;THETA=0.0002;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 234026903 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9827;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234026963 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5558;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234026988 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7156;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234027035 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.987;LDAF=0.1439;AVGPOST=0.9928;RSQ=0.9777;ERATE=0.0004;THETA=0.0002;AC=312;AN=2184 GT:DS:GL:BD 0.14285715 0
1 234027075 . A AG 7922 PASS INDEL;BAVGPOST=0.890;BRSQ=0.808;LDAF=0.4450;AVGPOST=0.8302;RSQ=0.7557;ERATE=0.0393;THETA=0.0002;AC=1012;AN=2184 GT:DS:GL:BD 0.46336997 0
1 234027080 rs34207533 G GA 44515 PASS INDEL;BAVGPOST=0.983;BRSQ=0.976;LDAF=0.5623;AVGPOST=0.9782;RSQ=0.9680;ERATE=0.0031;THETA=0.0002;AC=1233;AN=2184 GT:DS:GL:BD 0.56456041 1
1 234027148 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5001;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234027213 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5980;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234027224 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0040;AVGPOST=0.9968;RSQ=0.6785;ERATE=0.0006;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234027225 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0022;AVGPOST=0.9978;RSQ=0.6223;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234027376 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8191;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234027417 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7186;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234027434 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0010;AVGPOST=0.9986;RSQ=0.3821;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234027496 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0044;AVGPOST=0.9989;RSQ=0.8891;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234027566 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.896;LDAF=0.0034;AVGPOST=0.9978;RSQ=0.7728;ERATE=0.0003;THETA=0.0001;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234027573 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5624;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234027652 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.745;LDAF=0.0021;AVGPOST=0.9975;RSQ=0.4882;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234027688 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0134;AVGPOST=0.9993;RSQ=0.9835;ERATE=0.0002;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 234027689 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5053;AVGPOST=0.9979;RSQ=0.9965;ERATE=0.0003;THETA=0.0003;AC=1104;AN=2184 GT:DS:GL:BD 0.50549453 1
1 234027735 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.975;LDAF=0.3198;AVGPOST=0.9951;RSQ=0.9916;ERATE=0.0009;THETA=0.0004;AC=701;AN=2184 GT:DS:GL:BD 0.32097068 0
1 234027848 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0666;AVGPOST=0.9982;RSQ=0.9876;ERATE=0.0005;THETA=0.0007;AC=144;AN=2184 GT:DS:GL:BD 0.06593407 0
1 234027858 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0145;AVGPOST=0.9988;RSQ=0.9724;ERATE=0.0003;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 234028002 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0607;AVGPOST=0.9984;RSQ=0.9895;ERATE=0.0004;THETA=0.0003;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 234028041 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1728;AVGPOST=0.9978;RSQ=0.9943;ERATE=0.0004;THETA=0.0006;AC=377;AN=2184 GT:DS:GL:BD 0.17261904 0
1 234028081 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7787;ERATE=0.0002;THETA=0.0026;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234028228 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.987;LDAF=0.1737;AVGPOST=0.9895;RSQ=0.9721;ERATE=0.0057;THETA=0.0006;AC=372;AN=2184 GT:DS:GL:BD 0.17032968 0
1 234028243 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0038;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234028359 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2650;AVGPOST=0.9949;RSQ=0.9904;ERATE=0.0005;THETA=0.0051;AC=578;AN=2184 GT:DS:GL:BD 0.26465201 0
1 234028404 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.883;LDAF=0.0083;AVGPOST=0.9979;RSQ=0.8937;ERATE=0.0004;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 234028453 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.704;LDAF=0.0040;AVGPOST=0.9958;RSQ=0.5800;ERATE=0.0013;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234028645 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0153;AVGPOST=0.9995;RSQ=0.9856;ERATE=0.0003;THETA=0.0006;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 234028870 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.982;LDAF=0.0632;AVGPOST=0.9977;RSQ=0.9842;ERATE=0.0006;THETA=0.0015;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 234028926 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0930;AVGPOST=0.9987;RSQ=0.9945;ERATE=0.0003;THETA=0.0004;AC=201;AN=2184 GT:DS:GL:BD 0.09203297 0
1 234028931 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0393;AVGPOST=0.9991;RSQ=0.9923;ERATE=0.0003;THETA=0.0005;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 234028965 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8976;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234028984 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0002;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234029115 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=0.9996;RSQ=0.9692;ERATE=0.0002;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234029163 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7063;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234029288 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0115;AVGPOST=0.9995;RSQ=0.9795;ERATE=0.0003;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 234029486 . AT A 53 PASS INDEL;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5979;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234029673 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0135;AVGPOST=0.9973;RSQ=0.9242;ERATE=0.0003;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 234029693 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.848;LDAF=0.0030;AVGPOST=0.9986;RSQ=0.7880;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234029747 . C CT 13 PASS INDEL;BAVGPOST=0.999;BRSQ=0.864;LDAF=0.0022;AVGPOST=0.9966;RSQ=0.4201;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234029916 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0395;AVGPOST=0.9983;RSQ=0.9825;ERATE=0.0003;THETA=0.0003;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 234029941 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0029;AVGPOST=0.9994;RSQ=0.9201;ERATE=0.0002;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234030083 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0041;AVGPOST=0.9991;RSQ=0.9025;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234030173 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0542;AVGPOST=0.9991;RSQ=0.9927;ERATE=0.0003;THETA=0.0006;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 234030213 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.814;LDAF=0.0051;AVGPOST=0.9981;RSQ=0.8286;ERATE=0.0005;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234030290 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0093;AVGPOST=0.9996;RSQ=0.9814;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234030312 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5657;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234030364 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0061;AVGPOST=0.9980;RSQ=0.8648;ERATE=0.0004;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234030378 rs55845315 CAT C 11971 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0923;AVGPOST=0.9988;RSQ=0.9948;ERATE=0.0003;THETA=0.0008;AC=199;AN=2184 GT:DS:GL:BD 0.09111722 0
1 234030485 . AG A 6 PASS INDEL;BAVGPOST=0.996;BRSQ=0.542;LDAF=0.0043;AVGPOST=0.9950;RSQ=0.5083;ERATE=0.0008;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234030486 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.977;LDAF=0.0902;AVGPOST=0.9981;RSQ=0.9907;ERATE=0.0003;THETA=0.0006;AC=196;AN=2184 GT:DS:GL:BD 0.08974359 0
1 234030608 . G GT 1305 PASS INDEL;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0169;AVGPOST=0.9978;RSQ=0.9510;ERATE=0.0003;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 234030781 . TC T 89 PASS INDEL;BAVGPOST=0.999;BRSQ=0.641;LDAF=0.0024;AVGPOST=0.9965;RSQ=0.4501;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234030787 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.684;LDAF=0.0016;AVGPOST=0.9976;RSQ=0.4412;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234030809 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0128;AVGPOST=0.9999;RSQ=0.9968;ERATE=0.0002;THETA=0.0006;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 234030880 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234030898 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8807;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234031096 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6525;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234031098 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6889;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234031116 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0540;AVGPOST=0.9996;RSQ=0.9969;ERATE=0.0003;THETA=0.0006;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 234031127 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5996;ERATE=0.0002;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 234031139 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.9073;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234031183 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.833;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6908;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234031216 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6968;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234031236 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0540;AVGPOST=0.9995;RSQ=0.9958;ERATE=0.0003;THETA=0.0007;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 234031308 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.898;LDAF=0.0099;AVGPOST=0.9984;RSQ=0.9260;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234031342 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0028;AVGPOST=0.9975;RSQ=0.6464;ERATE=0.0006;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234031349 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6720;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234031379 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.923;LDAF=0.0290;AVGPOST=0.9964;RSQ=0.9492;ERATE=0.0004;THETA=0.0005;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 234031380 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5576;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234031389 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0053;AVGPOST=0.9990;RSQ=0.9252;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234031467 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6021;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234031495 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7493;ERATE=0.0002;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234031496 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.7143;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234031516 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234031701 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0645;AVGPOST=0.9998;RSQ=0.9986;ERATE=0.0002;THETA=0.0004;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 234031794 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0093;AVGPOST=0.9996;RSQ=0.9810;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234031837 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0050;AVGPOST=0.9991;RSQ=0.9421;ERATE=0.0003;THETA=0.0011;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234031920 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.685;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234031949 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0114;AVGPOST=0.9999;RSQ=0.9942;ERATE=0.0002;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 234031979 . AG A 74 PASS INDEL;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7105;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234032006 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0062;AVGPOST=0.9995;RSQ=0.9655;ERATE=0.0002;THETA=0.0001;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234032054 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7311;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234032071 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.773;LDAF=0.0074;AVGPOST=0.9931;RSQ=0.6721;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234032210 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7966;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234032298 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0135;AVGPOST=0.9985;RSQ=0.9545;ERATE=0.0002;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 234032330 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0019;AVGPOST=0.9985;RSQ=0.7096;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234032457 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0101;AVGPOST=0.9998;RSQ=0.9890;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234032596 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0037;AVGPOST=0.9980;RSQ=0.7930;ERATE=0.0004;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234032650 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0052;AVGPOST=0.9996;RSQ=0.9627;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234032756 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0540;AVGPOST=0.9997;RSQ=0.9976;ERATE=0.0002;THETA=0.0007;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 234032792 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.860;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.9203;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234032985 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234033063 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.903;LDAF=0.0028;AVGPOST=0.9965;RSQ=0.6123;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234033074 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5874;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234033169 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0029;AVGPOST=0.9978;RSQ=0.6863;ERATE=0.0012;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234033217 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3364;AVGPOST=0.9985;RSQ=0.9973;ERATE=0.0004;THETA=0.0006;AC=732;AN=2184 GT:DS:GL:BD 0.33516484 0
1 234033268 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8864;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234033331 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4108;AVGPOST=0.9984;RSQ=0.9974;ERATE=0.0004;THETA=0.0003;AC=895;AN=2184 GT:DS:GL:BD 0.40979853 0
1 234033508 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234033605 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5489;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234033637 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.626;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8383;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234033796 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0253;AVGPOST=0.9992;RSQ=0.9862;ERATE=0.0002;THETA=0.0003;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 234033906 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.6366;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234033954 . G GGA 29 PASS INDEL;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0018;AVGPOST=0.9980;RSQ=0.5344;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234034075 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.701;LDAF=0.0029;AVGPOST=0.9986;RSQ=0.7902;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234034081 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.927;LDAF=0.0124;AVGPOST=0.9979;RSQ=0.9187;ERATE=0.0004;THETA=0.0002;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 234034136 . A AT 808 PASS INDEL;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0113;AVGPOST=0.9989;RSQ=0.9565;ERATE=0.0004;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234034151 rs112744908 TTAC T 873 PASS INDEL;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0109;AVGPOST=0.9988;RSQ=0.9547;ERATE=0.0004;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234034179 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4106;AVGPOST=0.9986;RSQ=0.9974;ERATE=0.0006;THETA=0.0003;AC=895;AN=2184 GT:DS:GL:BD 0.40979853 0
1 234034336 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2331;AVGPOST=0.9995;RSQ=0.9987;ERATE=0.0003;THETA=0.0004;AC=508;AN=2184 GT:DS:GL:BD 0.23260073 0
1 234034492 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0102;AVGPOST=0.9996;RSQ=0.9830;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234034619 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9131;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234034644 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0052;AVGPOST=0.9997;RSQ=0.9750;ERATE=0.0002;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234034667 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0048;AVGPOST=0.9996;RSQ=0.9587;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234034683 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0093;AVGPOST=0.9997;RSQ=0.9834;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234034702 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0053;AVGPOST=0.9992;RSQ=0.9391;ERATE=0.0002;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234034804 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6252;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234034823 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.674;LDAF=0.0075;AVGPOST=0.9926;RSQ=0.6067;ERATE=0.0011;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234034902 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6313;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234034968 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.720;LDAF=0.0036;AVGPOST=0.9967;RSQ=0.6016;ERATE=0.0007;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234034995 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0019;AVGPOST=0.9977;RSQ=0.5076;ERATE=0.0007;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234035005 . CAT C 125 PASS INDEL;BAVGPOST=0.995;BRSQ=0.737;LDAF=0.0216;AVGPOST=0.9748;RSQ=0.5222;ERATE=0.0029;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 234035036 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0041;AVGPOST=0.9990;RSQ=0.9020;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234035139 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8414;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234035162 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1913;AVGPOST=0.9946;RSQ=0.9862;ERATE=0.0019;THETA=0.0005;AC=417;AN=2184 GT:DS:GL:BD 0.19093406 0
1 234035222 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3367;AVGPOST=0.9968;RSQ=0.9946;ERATE=0.0009;THETA=0.0004;AC=732;AN=2184 GT:DS:GL:BD 0.33516484 0
1 234035300 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0092;AVGPOST=0.9996;RSQ=0.9786;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234035420 rs34796742 T TC 59899 PASS INDEL;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.5990;AVGPOST=0.9965;RSQ=0.9943;ERATE=0.0004;THETA=0.0005;AC=1306;AN=2184 GT:DS:GL:BD 0.59798533 1
1 234035422 . C CA 15421 PASS INDEL;BAVGPOST=0.962;BRSQ=0.930;LDAF=0.5509;AVGPOST=0.9317;RSQ=0.8992;ERATE=0.0253;THETA=0.0004;AC=1235;AN=2184 GT:DS:GL:BD 0.56547618 1
1 234035458 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.748;LDAF=0.0039;AVGPOST=0.9984;RSQ=0.8321;ERATE=0.0005;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234035815 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0059;AVGPOST=0.9991;RSQ=0.9299;ERATE=0.0003;THETA=0.0001;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234035865 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9914;ERATE=0.0002;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234035923 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.9930;AVGPOST=0.9991;RSQ=0.9403;ERATE=0.0003;THETA=0.0004;AC=2169;AN=2184 GT:DS:GL:BD 0.99313188 1
1 234036006 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.984;LDAF=0.3467;AVGPOST=0.9943;RSQ=0.9902;ERATE=0.0014;THETA=0.0005;AC=755;AN=2184 GT:DS:GL:BD 0.34569597 0
1 234036007 . C CT 842 PASS INDEL;BAVGPOST=0.940;BRSQ=0.751;LDAF=0.1297;AVGPOST=0.9360;RSQ=0.8017;ERATE=0.0042;THETA=0.0003;AC=289;AN=2184 GT:DS:GL:BD 0.13232601 0
1 234036016 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.921;LDAF=0.1625;AVGPOST=0.9725;RSQ=0.9222;ERATE=0.0040;THETA=0.0003;AC=344;AN=2184 GT:DS:GL:BD 0.15750916 0
1 234036134 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0932;AVGPOST=0.9989;RSQ=0.9952;ERATE=0.0004;THETA=0.0005;AC=201;AN=2184 GT:DS:GL:BD 0.09203297 0
1 234036185 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0102;AVGPOST=0.9995;RSQ=0.9748;ERATE=0.0003;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234036186 . TA T 696 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0100;AVGPOST=0.9997;RSQ=0.9852;ERATE=0.0003;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234036710 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.850;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7805;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234036807 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3524;AVGPOST=0.9986;RSQ=0.9976;ERATE=0.0004;THETA=0.0004;AC=767;AN=2184 GT:DS:GL:BD 0.35119048 0
1 234036880 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234037056 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.703;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234037115 . C CT 1310 PASS INDEL;BAVGPOST=0.955;BRSQ=0.625;LDAF=0.0695;AVGPOST=0.9686;RSQ=0.8167;ERATE=0.0019;THETA=0.0003;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 234037117 rs74864435 T TA 8911 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0413;AVGPOST=0.9995;RSQ=0.9952;ERATE=0.0003;THETA=0.0003;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 234037201 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6404;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234037333 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.789;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6575;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234037404 . TC T 436 PASS INDEL;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0151;AVGPOST=0.9973;RSQ=0.9201;ERATE=0.0005;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 234037409 . CT C 1323 PASS INDEL;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0126;AVGPOST=0.9976;RSQ=0.9205;ERATE=0.0005;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 234037507 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8519;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234037526 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4156;AVGPOST=0.9993;RSQ=0.9987;ERATE=0.0003;THETA=0.0002;AC=905;AN=2184 GT:DS:GL:BD 0.41437730 0
1 234037577 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0104;AVGPOST=0.9991;RSQ=0.9730;ERATE=0.0002;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234037588 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0938;AVGPOST=0.9997;RSQ=0.9984;ERATE=0.0003;THETA=0.0004;AC=203;AN=2184 GT:DS:GL:BD 0.09294872 0
1 234037606 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234037671 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0992;AVGPOST=0.9996;RSQ=0.9980;ERATE=0.0003;THETA=0.0005;AC=215;AN=2184 GT:DS:GL:BD 0.09844323 0
1 234037726 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0006;AVGPOST=0.9991;RSQ=0.5415;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234037804 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0034;AVGPOST=0.9985;RSQ=0.8578;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234037849 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5025;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234037860 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0130;AVGPOST=0.9996;RSQ=0.9866;ERATE=0.0003;THETA=0.0002;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 234037870 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0002;AVGPOST=0.9996;RSQ=0.3608;ERATE=0.0002;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 234037915 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9726;ERATE=0.0002;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234037975 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8693;ERATE=0.0002;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234038004 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5989;AVGPOST=0.9978;RSQ=0.9965;ERATE=0.0003;THETA=0.0002;AC=1308;AN=2184 GT:DS:GL:BD 0.59890109 1
1 234038065 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6787;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234038067 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.851;LDAF=0.0046;AVGPOST=0.9989;RSQ=0.9043;ERATE=0.0005;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234038116 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.5168;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234038258 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0041;AVGPOST=0.9984;RSQ=0.8833;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234038386 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0105;AVGPOST=0.9981;RSQ=0.9273;ERATE=0.0002;THETA=0.0001;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 234038633 . GCTT G 43 PASS INDEL;BAVGPOST=0.999;BRSQ=0.776;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6066;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234038641 . TC T 25 PASS INDEL;BAVGPOST=0.992;BRSQ=0.339;LDAF=0.0099;AVGPOST=0.9903;RSQ=0.6607;ERATE=0.0006;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 234038642 rs112110989 CT C 2868 PASS INDEL;BAVGPOST=0.994;BRSQ=0.926;LDAF=0.0396;AVGPOST=0.9979;RSQ=0.9759;ERATE=0.0007;THETA=0.0004;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 234038648 . TTCTC T 9424 PASS INDEL;BAVGPOST=0.984;BRSQ=0.915;LDAF=0.0948;AVGPOST=0.9937;RSQ=0.9724;ERATE=0.0006;THETA=0.0003;AC=204;AN=2184 GT:DS:GL:BD 0.09340660 0
1 234038657 . TC T 1146 PASS INDEL;BAVGPOST=0.977;BRSQ=0.886;LDAF=0.0997;AVGPOST=0.9697;RSQ=0.8836;ERATE=0.0026;THETA=0.0005;AC=211;AN=2184 GT:DS:GL:BD 0.09661172 0
1 234038661 . TC T 17616 PASS INDEL;BAVGPOST=0.980;BRSQ=0.969;LDAF=0.4095;AVGPOST=0.9746;RSQ=0.9600;ERATE=0.0045;THETA=0.0003;AC=901;AN=2184 GT:DS:GL:BD 0.41254580 0
1 234038826 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7530;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234038926 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0416;AVGPOST=0.9990;RSQ=0.9904;ERATE=0.0004;THETA=0.0001;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 234039000 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0052;AVGPOST=0.9997;RSQ=0.9708;ERATE=0.0002;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234039086 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0099;AVGPOST=0.9992;RSQ=0.9656;ERATE=0.0003;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 234039319 . T TA 272 PASS INDEL;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0041;AVGPOST=0.9984;RSQ=0.8454;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234039490 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9203;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234039582 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7858;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234039668 rs112854847 TA T 26038 PASS INDEL;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4176;AVGPOST=0.9931;RSQ=0.9884;ERATE=0.0013;THETA=0.0002;AC=908;AN=2184 GT:DS:GL:BD 0.41575092 0
1 234039674 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0057;AVGPOST=0.9995;RSQ=0.9539;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234039787 . TG T 620 PASS INDEL;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0061;AVGPOST=0.9974;RSQ=0.8287;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234039857 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4158;AVGPOST=0.9989;RSQ=0.9980;ERATE=0.0004;THETA=0.0013;AC=906;AN=2184 GT:DS:GL:BD 0.41483516 0
1 234039906 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.989;LDAF=0.3386;AVGPOST=0.9966;RSQ=0.9941;ERATE=0.0006;THETA=0.0003;AC=738;AN=2184 GT:DS:GL:BD 0.33791208 0
1 234039968 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0741;AVGPOST=0.9996;RSQ=0.9975;ERATE=0.0003;THETA=0.0002;AC=162;AN=2184 GT:DS:GL:BD 0.07417583 0
1 234039971 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234040137 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0102;AVGPOST=0.9979;RSQ=0.9192;ERATE=0.0004;THETA=0.0010;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234040264 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0052;AVGPOST=0.9996;RSQ=0.9668;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234040421 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.720;LDAF=0.0337;AVGPOST=0.9589;RSQ=0.5003;ERATE=0.0033;THETA=0.0004;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 234040436 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.823;LDAF=0.0572;AVGPOST=0.9451;RSQ=0.6128;ERATE=0.0023;THETA=0.0004;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 234040471 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.290;LDAF=0.0480;AVGPOST=0.9333;RSQ=0.4359;ERATE=0.0039;THETA=0.0037;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 234040544 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.946;BRSQ=0.739;LDAF=0.1112;AVGPOST=0.9621;RSQ=0.8551;ERATE=0.0019;THETA=0.0008;AC=219;AN=2184 GT:DS:GL:BD 0.10027473 0
1 234040742 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.982;LDAF=0.4224;AVGPOST=0.9934;RSQ=0.9902;ERATE=0.0004;THETA=0.0003;AC=921;AN=2184 GT:DS:GL:BD 0.42170331 0
1 234040848 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7548;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234040866 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234040897 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0014;AVGPOST=0.9992;RSQ=0.7556;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234040898 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0646;AVGPOST=0.9995;RSQ=0.9968;ERATE=0.0003;THETA=0.0004;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 234041029 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.976;LDAF=0.0944;AVGPOST=0.9933;RSQ=0.9714;ERATE=0.0010;THETA=0.0006;AC=200;AN=2184 GT:DS:GL:BD 0.09157509 0
1 234041114 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.556;LDAF=0.0093;AVGPOST=0.9898;RSQ=0.5619;ERATE=0.0013;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234041131 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0618;AVGPOST=0.9893;RSQ=0.9314;ERATE=0.0008;THETA=0.0004;AC=129;AN=2184 GT:DS:GL:BD 0.05906593 0
1 234041154 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0078;AVGPOST=0.9971;RSQ=0.8399;ERATE=0.0004;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234041317 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0544;AVGPOST=0.9999;RSQ=0.9992;ERATE=0.0002;THETA=0.0004;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 234041422 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.984;LDAF=0.4080;AVGPOST=0.9907;RSQ=0.9864;ERATE=0.0093;THETA=0.0007;AC=888;AN=2184 GT:DS:GL:BD 0.40659341 0
1 234041479 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0004;AVGPOST=0.9998;RSQ=0.8054;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234041576 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0293;AVGPOST=0.9987;RSQ=0.9848;ERATE=0.0002;THETA=0.0028;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 234041667 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.942;LDAF=0.0112;AVGPOST=0.9983;RSQ=0.9299;ERATE=0.0013;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234041728 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0046;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234041735 . ATC A 679 PASS INDEL;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0095;AVGPOST=0.9989;RSQ=0.9505;ERATE=0.0004;THETA=0.0045;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234041792 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0070;AVGPOST=0.9991;RSQ=0.9602;ERATE=0.0002;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234041886 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.8047;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234041936 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.615;LDAF=0.0011;AVGPOST=0.9984;RSQ=0.4893;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234042048 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9787;ERATE=0.0002;THETA=0.0012;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234042129 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.950;LDAF=0.0193;AVGPOST=0.9974;RSQ=0.9525;ERATE=0.0002;THETA=0.0028;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 234042168 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0544;AVGPOST=0.9997;RSQ=0.9972;ERATE=0.0003;THETA=0.0003;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 234042209 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234042231 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8576;ERATE=0.0002;THETA=0.0031;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234042383 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0167;AVGPOST=0.9989;RSQ=0.9746;ERATE=0.0002;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 234042473 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5558;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234042504 rs112487922 T TA 4910 PASS INDEL;BAVGPOST=0.996;BRSQ=0.982;LDAF=0.0653;AVGPOST=0.9867;RSQ=0.9180;ERATE=0.0029;THETA=0.0006;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 234042700 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.929;LDAF=0.0107;AVGPOST=0.9980;RSQ=0.9373;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234042804 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.707;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5316;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234042808 . AAAATT A 167 PASS INDEL;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4875;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234042834 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0065;AVGPOST=0.9995;RSQ=0.9636;ERATE=0.0002;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234042869 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5978;AVGPOST=0.9970;RSQ=0.9949;ERATE=0.0004;THETA=0.0004;AC=1304;AN=2184 GT:DS:GL:BD 0.59706962 1
1 234042910 . ATTC A 65 PASS INDEL;BAVGPOST=0.999;BRSQ=0.663;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4737;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234043131 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5974;AVGPOST=0.9976;RSQ=0.9960;ERATE=0.0003;THETA=0.0005;AC=1304;AN=2184 GT:DS:GL:BD 0.59706962 1
1 234043307 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0031;AVGPOST=0.9995;RSQ=0.9430;ERATE=0.0002;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234043488 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0546;AVGPOST=0.9995;RSQ=0.9961;ERATE=0.0003;THETA=0.0013;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 234043533 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0086;AVGPOST=0.9983;RSQ=0.9103;ERATE=0.0004;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 234043711 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.590;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.4139;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234043800 . CT C 124 PASS INDEL;BAVGPOST=0.999;BRSQ=0.668;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8064;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234043924 rs11453869 C CA 6395 PASS INDEL;BAVGPOST=0.989;BRSQ=0.953;LDAF=0.1253;AVGPOST=0.9700;RSQ=0.8986;ERATE=0.0057;THETA=0.0003;AC=260;AN=2184 GT:DS:GL:BD 0.11904762 0
1 234043943 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0137;AVGPOST=0.9982;RSQ=0.9439;ERATE=0.0004;THETA=0.0010;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 234044251 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.7036;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234044252 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7404;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234044261 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5315;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234044271 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0543;AVGPOST=0.9992;RSQ=0.9933;ERATE=0.0002;THETA=0.0003;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 234044381 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.566;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.6270;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234044527 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.918;LDAF=0.0486;AVGPOST=0.9904;RSQ=0.9354;ERATE=0.0005;THETA=0.0006;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 234044531 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.910;LDAF=0.0556;AVGPOST=0.9827;RSQ=0.8898;ERATE=0.0022;THETA=0.0006;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 234044559 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.918;LDAF=0.0099;AVGPOST=0.9984;RSQ=0.9296;ERATE=0.0004;THETA=0.0015;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 234044588 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.989;LDAF=0.4803;AVGPOST=0.9881;RSQ=0.9827;ERATE=0.0012;THETA=0.0022;AC=1050;AN=2184 GT:DS:GL:BD 0.48076922 0
1 234044631 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6231;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234044726 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0104;AVGPOST=0.9986;RSQ=0.9382;ERATE=0.0003;THETA=0.0073;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234044743 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0548;AVGPOST=0.9980;RSQ=0.9856;ERATE=0.0003;THETA=0.0003;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 234044771 . AT A 63 PASS INDEL;BAVGPOST=0.997;BRSQ=0.596;LDAF=0.0083;AVGPOST=0.9978;RSQ=0.8925;ERATE=0.0003;THETA=0.0043;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 234044803 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.763;LDAF=0.0029;AVGPOST=0.9972;RSQ=0.6021;ERATE=0.0005;THETA=0.0023;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234044879 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7278;ERATE=0.0005;THETA=0.0050;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234044983 rs113980261 CTG C 4241 PASS INDEL;BAVGPOST=0.998;BRSQ=0.980;LDAF=0.0227;AVGPOST=0.9983;RSQ=0.9735;ERATE=0.0003;THETA=0.0003;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 234045185 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0539;AVGPOST=0.9991;RSQ=0.9938;ERATE=0.0003;THETA=0.0007;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 234045298 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2338;AVGPOST=0.9965;RSQ=0.9924;ERATE=0.0004;THETA=0.0083;AC=510;AN=2184 GT:DS:GL:BD 0.23351648 0
1 234045310 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0546;AVGPOST=0.9996;RSQ=0.9973;ERATE=0.0002;THETA=0.0007;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 234045359 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7587;ERATE=0.0004;THETA=0.0051;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234045395 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.6908;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234045399 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5936;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234045452 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0040;AVGPOST=0.9995;RSQ=0.9609;ERATE=0.0002;THETA=0.0113;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234045516 . G GC 191 PASS INDEL;BAVGPOST=0.999;BRSQ=0.727;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6545;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234045624 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0056;AVGPOST=0.9996;RSQ=0.9688;ERATE=0.0003;THETA=0.0035;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234045673 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8495;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234045684 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234045696 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0078;AVGPOST=0.9995;RSQ=0.9751;ERATE=0.0003;THETA=0.0020;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 234045718 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.7083;AVGPOST=0.9948;RSQ=0.9914;ERATE=0.0003;THETA=0.0076;AC=1548;AN=2184 GT:DS:GL:BD 0.70879120 1
1 234045917 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234045947 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6991;ERATE=0.0003;THETA=0.0073;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234045997 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0030;AVGPOST=0.9989;RSQ=0.8483;ERATE=0.0003;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234046022 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0032;AVGPOST=0.9997;RSQ=0.9547;ERATE=0.0002;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234046035 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.979;LDAF=0.0563;AVGPOST=0.9982;RSQ=0.9870;ERATE=0.0003;THETA=0.0009;AC=122;AN=2184 GT:DS:GL:BD 0.05586081 0
1 234046062 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6797;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234046117 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0532;AVGPOST=0.9989;RSQ=0.9923;ERATE=0.0002;THETA=0.0019;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 234046168 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.893;LDAF=0.0093;AVGPOST=0.9978;RSQ=0.9012;ERATE=0.0003;THETA=0.0011;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 234046292 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0072;AVGPOST=0.9991;RSQ=0.9515;ERATE=0.0003;THETA=0.0014;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234046376 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0262;AVGPOST=0.9990;RSQ=0.9857;ERATE=0.0002;THETA=0.0017;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 234046429 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.755;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234046475 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0023;AVGPOST=0.9994;RSQ=0.8769;ERATE=0.0002;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234046554 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.984;LDAF=0.3588;AVGPOST=0.9892;RSQ=0.9835;ERATE=0.0004;THETA=0.0003;AC=782;AN=2184 GT:DS:GL:BD 0.35805860 0
1 234046603 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.7312;AVGPOST=0.9938;RSQ=0.9894;ERATE=0.0013;THETA=0.0020;AC=1598;AN=2184 GT:DS:GL:BD 0.73168498 1
1 234046629 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0145;AVGPOST=0.9974;RSQ=0.9325;ERATE=0.0003;THETA=0.0007;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 234046630 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.749;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234046681 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.7295;AVGPOST=0.9976;RSQ=0.9952;ERATE=0.0004;THETA=0.0014;AC=1595;AN=2184 GT:DS:GL:BD 0.73031133 1
1 234046734 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0549;AVGPOST=0.9968;RSQ=0.9784;ERATE=0.0003;THETA=0.0004;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 234046758 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8879;ERATE=0.0003;THETA=0.0023;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234046798 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0002;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234046871 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.960;LDAF=0.0773;AVGPOST=0.9936;RSQ=0.9667;ERATE=0.0003;THETA=0.0035;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 234046902 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.775;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7682;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234046935 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234046954 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0097;AVGPOST=0.9997;RSQ=0.9854;ERATE=0.0003;THETA=0.0055;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 234047018 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.8085;ERATE=0.0007;THETA=0.0031;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234047040 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.953;LDAF=0.0204;AVGPOST=0.9964;RSQ=0.9367;ERATE=0.0003;THETA=0.0055;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 234047083 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0052;AVGPOST=0.9990;RSQ=0.9280;ERATE=0.0003;THETA=0.0036;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234047109 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.711;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6269;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234047178 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8924;ERATE=0.0002;THETA=0.0013;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234047265 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.905;LDAF=0.0329;AVGPOST=0.9930;RSQ=0.9215;ERATE=0.0005;THETA=0.0005;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 234047297 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234047318 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0529;AVGPOST=0.9962;RSQ=0.9702;ERATE=0.0004;THETA=0.0052;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 234047461 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.974;LDAF=0.0464;AVGPOST=0.9974;RSQ=0.9754;ERATE=0.0003;THETA=0.0046;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 234047521 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0039;AVGPOST=0.9990;RSQ=0.9078;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234047643 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.982;LDAF=0.2626;AVGPOST=0.9876;RSQ=0.9755;ERATE=0.0005;THETA=0.0030;AC=571;AN=2184 GT:DS:GL:BD 0.26144689 0
1 234047649 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8667;ERATE=0.0002;THETA=0.0141;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234047718 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.972;LDAF=0.0385;AVGPOST=0.9948;RSQ=0.9524;ERATE=0.0006;THETA=0.0198;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 234047842 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0045;AVGPOST=0.9989;RSQ=0.9019;ERATE=0.0004;THETA=0.0052;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234047937 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5240;ERATE=0.0003;THETA=0.0050;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234047950 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0002;AVGPOST=0.9995;RSQ=0.0596;ERATE=0.0003;THETA=0.0213;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 234048031 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.864;BRSQ=0.771;LDAF=0.3878;AVGPOST=0.8351;RSQ=0.7555;ERATE=0.0740;THETA=0.0135;AC=791;AN=2184 GT:DS:GL:BD 0.36217949 0
1 234048117 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.731;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6288;ERATE=0.0003;THETA=0.0145;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234048120 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0054;AVGPOST=0.9988;RSQ=0.9017;ERATE=0.0003;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234048154 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.646;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4128;ERATE=0.0006;THETA=0.0053;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234048197 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.845;LDAF=0.0050;AVGPOST=0.9970;RSQ=0.7615;ERATE=0.0005;THETA=0.0072;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234048201 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.8677;ERATE=0.0003;THETA=0.0031;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234048209 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.610;LDAF=0.0015;AVGPOST=0.9982;RSQ=0.5366;ERATE=0.0004;THETA=0.0104;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234048218 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.692;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5451;ERATE=0.0003;THETA=0.0039;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234048297 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6941;ERATE=0.0003;THETA=0.0057;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234048324 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.886;LDAF=0.0064;AVGPOST=0.9984;RSQ=0.8903;ERATE=0.0003;THETA=0.0017;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234048363 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.670;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.5453;ERATE=0.0002;THETA=0.0053;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234048376 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.905;LDAF=0.0055;AVGPOST=0.9973;RSQ=0.8077;ERATE=0.0004;THETA=0.0043;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234048449 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0002;THETA=0.0061;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234048541 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0166;AVGPOST=0.9998;RSQ=0.9950;ERATE=0.0002;THETA=0.0026;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 234048614 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8136;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234048750 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0019;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234048794 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0165;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0019;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 234048809 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0028;AVGPOST=0.9984;RSQ=0.7997;ERATE=0.0003;THETA=0.0054;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234048862 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0064;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234048881 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.693;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5806;ERATE=0.0003;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234048944 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.837;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0003;THETA=0.0075;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234049096 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.8054;ERATE=0.0003;THETA=0.0059;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234049148 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0045;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234049245 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0087;AVGPOST=0.9999;RSQ=0.9949;ERATE=0.0002;THETA=0.0014;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 234049337 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9438;ERATE=0.0003;THETA=0.0106;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234049338 . GA G 87 PASS INDEL;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6282;ERATE=0.0004;THETA=0.0051;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234049371 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6745;ERATE=0.0003;THETA=0.0061;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234049385 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6944;ERATE=0.0003;THETA=0.0069;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234049607 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234049637 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0002;THETA=0.0082;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234049697 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.6629;ERATE=0.0003;THETA=0.0020;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234049703 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9165;ERATE=0.0002;THETA=0.0028;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234049801 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7348;ERATE=0.0002;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234049951 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7965;ERATE=0.0003;THETA=0.0149;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234050077 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9524;ERATE=0.0003;THETA=0.0061;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234050090 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9564;ERATE=0.0002;THETA=0.0128;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234050263 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0002;THETA=0.0063;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234050267 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8541;ERATE=0.0003;THETA=0.0056;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234050353 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3274;AVGPOST=0.9965;RSQ=0.9939;ERATE=0.0004;THETA=0.0008;AC=716;AN=2184 GT:DS:GL:BD 0.32783884 0
1 234050380 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234050500 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0070;AVGPOST=0.9992;RSQ=0.9539;ERATE=0.0003;THETA=0.0009;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234050557 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0134;AVGPOST=0.9997;RSQ=0.9903;ERATE=0.0003;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 234050571 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8338;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234050622 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234050627 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6193;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234050723 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6756;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234050754 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0073;AVGPOST=0.9993;RSQ=0.9566;ERATE=0.0003;THETA=0.0010;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234050759 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9756;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234050782 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0014;AVGPOST=0.9992;RSQ=0.7878;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234050809 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0002;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234050865 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5898;AVGPOST=0.9957;RSQ=0.9930;ERATE=0.0003;THETA=0.0007;AC=1288;AN=2184 GT:DS:GL:BD 0.58974361 1
1 234051054 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8509;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234051058 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0093;AVGPOST=0.9994;RSQ=0.9722;ERATE=0.0002;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234051073 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5805;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234051238 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8520;ERATE=0.0006;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234051286 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7966;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234051291 . G GT 2527 PASS INDEL;BAVGPOST=0.988;BRSQ=0.833;LDAF=0.0486;AVGPOST=0.9659;RSQ=0.7137;ERATE=0.0063;THETA=0.0008;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 234051299 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7903;ERATE=0.0004;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234051300 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.804;LDAF=0.0059;AVGPOST=0.9941;RSQ=0.6175;ERATE=0.0023;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234051338 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8664;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234051372 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0042;AVGPOST=0.9997;RSQ=0.9637;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234051378 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234051387 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.4933;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234051445 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.985;LDAF=0.1230;AVGPOST=0.9968;RSQ=0.9873;ERATE=0.0004;THETA=0.0006;AC=268;AN=2184 GT:DS:GL:BD 0.12271062 0
1 234051494 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234051508 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.932;LDAF=0.0580;AVGPOST=0.9890;RSQ=0.9228;ERATE=0.0006;THETA=0.0005;AC=126;AN=2184 GT:DS:GL:BD 0.05769231 0
1 234051521 . AAG A 187 PASS INDEL;BAVGPOST=0.998;BRSQ=0.666;LDAF=0.0039;AVGPOST=0.9946;RSQ=0.5093;ERATE=0.0010;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234051540 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5417;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234051598 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5402;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234051763 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.825;LDAF=0.0110;AVGPOST=0.9938;RSQ=0.7867;ERATE=0.0009;THETA=0.0010;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234051801 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8090;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234051824 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.6635;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234051924 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3071;AVGPOST=0.9959;RSQ=0.9925;ERATE=0.0008;THETA=0.0007;AC=670;AN=2184 GT:DS:GL:BD 0.30677655 0
1 234051987 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.814;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.5301;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234051998 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9267;AVGPOST=0.9984;RSQ=0.9928;ERATE=0.0004;THETA=0.0005;AC=2024;AN=2184 GT:DS:GL:BD 0.92673993 1
1 234052067 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0104;AVGPOST=0.9989;RSQ=0.9595;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234052094 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0119;AVGPOST=0.9972;RSQ=0.8954;ERATE=0.0004;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234052134 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0047;AVGPOST=0.9966;RSQ=0.7110;ERATE=0.0005;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234052263 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0234;AVGPOST=0.9993;RSQ=0.9855;ERATE=0.0004;THETA=0.0004;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 234052339 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3485;AVGPOST=0.9969;RSQ=0.9944;ERATE=0.0005;THETA=0.0003;AC=762;AN=2184 GT:DS:GL:BD 0.34890109 0
1 234052419 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7703;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234052439 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1008;AVGPOST=0.9976;RSQ=0.9909;ERATE=0.0003;THETA=0.0004;AC=221;AN=2184 GT:DS:GL:BD 0.10119048 0
1 234052466 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.9283;AVGPOST=0.9990;RSQ=0.9953;ERATE=0.0003;THETA=0.0003;AC=2028;AN=2184 GT:DS:GL:BD 0.92857140 1
1 234052574 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7548;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234052710 rs112624115 G GATTC 182461 PASS INDEL;BAVGPOST=0.994;BRSQ=0.963;LDAF=0.9256;AVGPOST=0.9982;RSQ=0.9908;ERATE=0.0004;THETA=0.0004;AC=2022;AN=2184 GT:DS:GL:BD 0.92582417 1
1 234052761 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5776;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234052821 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.729;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7110;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234052852 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7543;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234052897 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0383;AVGPOST=0.9991;RSQ=0.9912;ERATE=0.0003;THETA=0.0004;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 234052993 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6564;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234053017 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.5944;AVGPOST=0.9914;RSQ=0.9870;ERATE=0.0013;THETA=0.0002;AC=1293;AN=2184 GT:DS:GL:BD 0.59203297 1
1 234053070 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3365;AVGPOST=0.9974;RSQ=0.9958;ERATE=0.0003;THETA=0.0003;AC=737;AN=2184 GT:DS:GL:BD 0.33745420 0
1 234053074 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7452;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234053167 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0087;AVGPOST=0.9985;RSQ=0.9403;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 234053212 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234053320 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.973;LDAF=0.0090;AVGPOST=0.9986;RSQ=0.9295;ERATE=0.0004;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 234053343 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0242;AVGPOST=0.9995;RSQ=0.9915;ERATE=0.0002;THETA=0.0002;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 234053434 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234053691 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6589;ERATE=0.0002;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234053808 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0072;AVGPOST=0.9998;RSQ=0.9867;ERATE=0.0002;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234053865 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.934;LDAF=0.0080;AVGPOST=0.9979;RSQ=0.8872;ERATE=0.0005;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234053866 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0244;AVGPOST=0.9997;RSQ=0.9943;ERATE=0.0004;THETA=0.0005;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 234053881 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0112;AVGPOST=0.9996;RSQ=0.9823;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234053888 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0050;AVGPOST=0.9995;RSQ=0.9616;ERATE=0.0002;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234053918 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5638;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234054014 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.995;LDAF=0.4225;AVGPOST=0.9972;RSQ=0.9957;ERATE=0.0006;THETA=0.0005;AC=922;AN=2184 GT:DS:GL:BD 0.42216116 0
1 234054085 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0246;AVGPOST=0.9992;RSQ=0.9864;ERATE=0.0004;THETA=0.0005;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 234054114 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234054172 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0454;AVGPOST=0.9995;RSQ=0.9960;ERATE=0.0003;THETA=0.0004;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 234054179 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0444;AVGPOST=0.9994;RSQ=0.9950;ERATE=0.0003;THETA=0.0005;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 234054468 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0168;AVGPOST=0.9992;RSQ=0.9794;ERATE=0.0004;THETA=0.0006;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 234054524 . TTCTC T 17504 PASS INDEL;BAVGPOST=0.913;BRSQ=0.857;LDAF=0.3240;AVGPOST=0.9461;RSQ=0.9159;ERATE=0.0022;THETA=0.0024;AC=733;AN=2184 GT:DS:GL:BD 0.33562270 0
1 234054540 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.917;BRSQ=0.710;LDAF=0.1845;AVGPOST=0.8933;RSQ=0.6973;ERATE=0.0213;THETA=0.0004;AC=352;AN=2184 GT:DS:GL:BD 0.16117217 0
1 234054542 rs34711437 CTT C 11252 PASS INDEL;BAVGPOST=0.830;BRSQ=0.646;LDAF=0.3686;AVGPOST=0.7822;RSQ=0.6289;ERATE=0.0534;THETA=0.0003;AC=741;AN=2184 GT:DS:GL:BD 0.33928570 0
1 234054627 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9281;AVGPOST=0.9998;RSQ=0.9987;ERATE=0.0003;THETA=0.0003;AC=2027;AN=2184 GT:DS:GL:BD 0.92811358 1
1 234054630 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1017;AVGPOST=0.9974;RSQ=0.9894;ERATE=0.0004;THETA=0.0003;AC=218;AN=2184 GT:DS:GL:BD 0.09981685 0
1 234054721 . C CAGA 310 PASS INDEL;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6282;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234054763 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0265;AVGPOST=0.9989;RSQ=0.9850;ERATE=0.0003;THETA=0.0003;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 234054790 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0251;AVGPOST=0.9982;RSQ=0.9731;ERATE=0.0003;THETA=0.0003;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 234054872 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.704;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234055025 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.0329;AVGPOST=0.9989;RSQ=0.9875;ERATE=0.0003;THETA=0.0004;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 234055039 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3507;AVGPOST=0.9988;RSQ=0.9976;ERATE=0.0005;THETA=0.0003;AC=767;AN=2184 GT:DS:GL:BD 0.35119048 0
1 234055170 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6262;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234055244 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5359;AVGPOST=0.9976;RSQ=0.9962;ERATE=0.0006;THETA=0.0002;AC=1168;AN=2184 GT:DS:GL:BD 0.53479856 1
1 234055399 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.9282;AVGPOST=0.9998;RSQ=0.9990;ERATE=0.0003;THETA=0.0025;AC=2027;AN=2184 GT:DS:GL:BD 0.92811358 1
1 234055489 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0022;AVGPOST=0.9991;RSQ=0.8535;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234055584 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0170;AVGPOST=0.9999;RSQ=0.9962;ERATE=0.0003;THETA=0.0002;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 234055603 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.7145;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234055617 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0002;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234055631 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5459;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234055648 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0053;AVGPOST=0.9990;RSQ=0.9253;ERATE=0.0002;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234055769 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5370;AVGPOST=0.9990;RSQ=0.9985;ERATE=0.0004;THETA=0.0014;AC=1171;AN=2184 GT:DS:GL:BD 0.53617215 1
1 234055910 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0070;AVGPOST=0.9992;RSQ=0.9529;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234056149 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234056174 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3407;AVGPOST=0.9974;RSQ=0.9959;ERATE=0.0005;THETA=0.0035;AC=745;AN=2184 GT:DS:GL:BD 0.34111720 0
1 234056181 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0158;AVGPOST=0.9993;RSQ=0.9814;ERATE=0.0003;THETA=0.0007;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 234056242 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.9553;AVGPOST=0.9980;RSQ=0.9833;ERATE=0.0005;THETA=0.0003;AC=2087;AN=2184 GT:DS:GL:BD 0.95558608 1
1 234056363 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234056364 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9156;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234056380 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.6700;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234056431 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=1.0000;AVGPOST=1.0000;RSQ=0.0500;ERATE=0.0002;THETA=0.0002;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 234056436 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0029;AVGPOST=0.9994;RSQ=0.9026;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234056486 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0566;AVGPOST=0.9996;RSQ=0.9976;ERATE=0.0002;THETA=0.0005;AC=124;AN=2184 GT:DS:GL:BD 0.05677656 0
1 234056574 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0094;AVGPOST=0.9985;RSQ=0.9451;ERATE=0.0003;THETA=0.0008;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234056634 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0002;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234056767 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234056858 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0440;AVGPOST=0.9995;RSQ=0.9951;ERATE=0.0004;THETA=0.0003;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 234056957 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1008;AVGPOST=0.9992;RSQ=0.9961;ERATE=0.0005;THETA=0.0002;AC=218;AN=2184 GT:DS:GL:BD 0.09981685 0
1 234057007 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.1124;AVGPOST=0.9996;RSQ=0.9983;ERATE=0.0003;THETA=0.0005;AC=244;AN=2184 GT:DS:GL:BD 0.11172161 0
1 234057047 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5693;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234057145 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3741;AVGPOST=0.9982;RSQ=0.9967;ERATE=0.0004;THETA=0.0002;AC=818;AN=2184 GT:DS:GL:BD 0.37454212 0
1 234057223 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.5440;AVGPOST=0.9919;RSQ=0.9877;ERATE=0.0031;THETA=0.0004;AC=1187;AN=2184 GT:DS:GL:BD 0.54349816 1
1 234057306 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234057326 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8338;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234057446 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.726;LDAF=0.0325;AVGPOST=0.9797;RSQ=0.7543;ERATE=0.0015;THETA=0.0003;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 234057537 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.921;LDAF=0.0268;AVGPOST=0.9979;RSQ=0.9639;ERATE=0.0006;THETA=0.0004;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 234057574 . ATGT A 625 PASS INDEL;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0046;AVGPOST=0.9988;RSQ=0.8831;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234057658 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9412;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234057695 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8016;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234057779 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.955;LDAF=0.3926;AVGPOST=0.9657;RSQ=0.9490;ERATE=0.0087;THETA=0.0004;AC=864;AN=2184 GT:DS:GL:BD 0.39560440 0
1 234057820 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.950;LDAF=0.0717;AVGPOST=0.9966;RSQ=0.9791;ERATE=0.0005;THETA=0.0001;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 234057916 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0090;AVGPOST=0.9986;RSQ=0.9300;ERATE=0.0005;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 234058508 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5519;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234058551 . ATCT A 285 PASS INDEL;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0026;AVGPOST=0.9968;RSQ=0.5076;ERATE=0.0009;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234058586 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.923;BRSQ=0.868;LDAF=0.5053;AVGPOST=0.9324;RSQ=0.8997;ERATE=0.0059;THETA=0.0003;AC=1136;AN=2184 GT:DS:GL:BD 0.52014655 1
1 234058629 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.956;LDAF=0.0311;AVGPOST=0.9984;RSQ=0.9788;ERATE=0.0004;THETA=0.0004;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 234058654 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.836;LDAF=0.0109;AVGPOST=0.9956;RSQ=0.8285;ERATE=0.0007;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234058668 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0074;AVGPOST=0.9997;RSQ=0.9791;ERATE=0.0004;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234058680 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.799;LDAF=0.0176;AVGPOST=0.9862;RSQ=0.7170;ERATE=0.0004;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 234058696 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.563;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.3976;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234058698 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0234;AVGPOST=0.9982;RSQ=0.9659;ERATE=0.0004;THETA=0.0003;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 234058731 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0072;AVGPOST=0.9997;RSQ=0.9806;ERATE=0.0002;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234058872 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7966;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234058920 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.987;LDAF=0.2942;AVGPOST=0.9797;RSQ=0.9626;ERATE=0.0024;THETA=0.0003;AC=642;AN=2184 GT:DS:GL:BD 0.29395604 0
1 234058924 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.726;LDAF=0.0023;AVGPOST=0.9972;RSQ=0.5340;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234058934 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1086;AVGPOST=0.9947;RSQ=0.9775;ERATE=0.0007;THETA=0.0001;AC=231;AN=2184 GT:DS:GL:BD 0.10576923 0
1 234059121 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3987;AVGPOST=0.9963;RSQ=0.9945;ERATE=0.0005;THETA=0.0008;AC=870;AN=2184 GT:DS:GL:BD 0.39835164 0
1 234059145 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5123;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234059154 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0128;AVGPOST=0.9964;RSQ=0.8824;ERATE=0.0007;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234059155 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0135;AVGPOST=0.9984;RSQ=0.9472;ERATE=0.0004;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 234059255 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.1072;AVGPOST=0.9979;RSQ=0.9901;ERATE=0.0005;THETA=0.0002;AC=231;AN=2184 GT:DS:GL:BD 0.10576923 0
1 234059495 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0087;AVGPOST=0.9991;RSQ=0.9550;ERATE=0.0004;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 234059543 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6830;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234059545 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0152;AVGPOST=0.9998;RSQ=0.9948;ERATE=0.0003;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 234059567 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6373;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234059688 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.735;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8538;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234059694 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0268;AVGPOST=0.9988;RSQ=0.9842;ERATE=0.0003;THETA=0.0002;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 234059702 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234059723 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0020;AVGPOST=0.9993;RSQ=0.8354;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234059750 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0099;AVGPOST=0.9987;RSQ=0.9520;ERATE=0.0002;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 234059751 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0057;AVGPOST=0.9989;RSQ=0.9236;ERATE=0.0004;THETA=0.0001;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234059786 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.9251;AVGPOST=0.9937;RSQ=0.9677;ERATE=0.0011;THETA=0.0002;AC=2024;AN=2184 GT:DS:GL:BD 0.92673993 1
1 234059856 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0258;AVGPOST=0.9987;RSQ=0.9841;ERATE=0.0004;THETA=0.0004;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 234059863 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.981;LDAF=0.3321;AVGPOST=0.9891;RSQ=0.9834;ERATE=0.0010;THETA=0.0005;AC=728;AN=2184 GT:DS:GL:BD 0.33333334 0
1 234059875 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8105;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234059937 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0255;AVGPOST=0.9989;RSQ=0.9845;ERATE=0.0002;THETA=0.0002;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 234059949 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3987;AVGPOST=0.9954;RSQ=0.9933;ERATE=0.0006;THETA=0.0004;AC=873;AN=2184 GT:DS:GL:BD 0.39972529 0
1 234060024 . G GT 1372 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0117;AVGPOST=0.9984;RSQ=0.9378;ERATE=0.0005;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234060037 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.760;LDAF=0.0032;AVGPOST=0.9969;RSQ=0.6663;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234060103 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0077;AVGPOST=0.9985;RSQ=0.9124;ERATE=0.0003;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234060118 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.741;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.6355;ERATE=0.0010;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234060121 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0153;AVGPOST=0.9995;RSQ=0.9870;ERATE=0.0002;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 234060214 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.3408;AVGPOST=0.9875;RSQ=0.9807;ERATE=0.0016;THETA=0.0003;AC=743;AN=2184 GT:DS:GL:BD 0.34020147 0
1 234060226 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1064;AVGPOST=0.9987;RSQ=0.9939;ERATE=0.0005;THETA=0.0002;AC=231;AN=2184 GT:DS:GL:BD 0.10576923 0
1 234060227 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0019;AVGPOST=0.9976;RSQ=0.5037;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234060263 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.745;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5940;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234060319 . CA C 6479 PASS INDEL;BAVGPOST=0.995;BRSQ=0.974;LDAF=0.1072;AVGPOST=0.9974;RSQ=0.9895;ERATE=0.0006;THETA=0.0002;AC=231;AN=2184 GT:DS:GL:BD 0.10576923 0
1 234060361 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.979;LDAF=0.2972;AVGPOST=0.9913;RSQ=0.9840;ERATE=0.0011;THETA=0.0005;AC=656;AN=2184 GT:DS:GL:BD 0.30036631 0
1 234060387 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0078;AVGPOST=0.9980;RSQ=0.8884;ERATE=0.0005;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234060510 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.820;LDAF=0.9468;AVGPOST=0.9587;RSQ=0.7085;ERATE=0.0062;THETA=0.0003;AC=2094;AN=2184 GT:DS:GL:BD 0.95879120 1
1 234060549 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.3008;AVGPOST=0.9960;RSQ=0.9918;ERATE=0.0006;THETA=0.0003;AC=659;AN=2184 GT:DS:GL:BD 0.30173993 0
1 234060590 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.830;LDAF=0.0069;AVGPOST=0.9973;RSQ=0.8373;ERATE=0.0004;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234060910 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.5442;ERATE=0.0007;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234060950 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0143;AVGPOST=0.9972;RSQ=0.9193;ERATE=0.0006;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 234060966 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.983;LDAF=0.0437;AVGPOST=0.9989;RSQ=0.9892;ERATE=0.0004;THETA=0.0007;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 234061018 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.1018;AVGPOST=0.9972;RSQ=0.9868;ERATE=0.0006;THETA=0.0004;AC=221;AN=2184 GT:DS:GL:BD 0.10119048 0
1 234061020 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0023;AVGPOST=0.9973;RSQ=0.5138;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234061078 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0031;AVGPOST=0.9963;RSQ=0.6270;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234061146 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0285;AVGPOST=0.9983;RSQ=0.9754;ERATE=0.0005;THETA=0.0003;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 234061156 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.959;LDAF=0.3935;AVGPOST=0.9721;RSQ=0.9563;ERATE=0.0040;THETA=0.0004;AC=866;AN=2184 GT:DS:GL:BD 0.39652014 0
1 234061268 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4616;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234061368 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0223;AVGPOST=0.9935;RSQ=0.8794;ERATE=0.0008;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 234061415 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0158;AVGPOST=0.9989;RSQ=0.9676;ERATE=0.0004;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 234061470 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0950;AVGPOST=0.9971;RSQ=0.9864;ERATE=0.0007;THETA=0.0007;AC=203;AN=2184 GT:DS:GL:BD 0.09294872 0
1 234061560 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0099;AVGPOST=0.9984;RSQ=0.9265;ERATE=0.0005;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234061563 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0112;AVGPOST=0.9958;RSQ=0.8491;ERATE=0.0007;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234061845 . CAGTT C 246 PASS INDEL;BAVGPOST=0.999;BRSQ=0.770;LDAF=0.0037;AVGPOST=0.9973;RSQ=0.7280;ERATE=0.0004;THETA=0.0001;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234061874 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0046;AVGPOST=0.9986;RSQ=0.8651;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234061980 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0031;AVGPOST=0.9975;RSQ=0.6779;ERATE=0.0007;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234061983 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0111;AVGPOST=0.9997;RSQ=0.9880;ERATE=0.0003;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234061984 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234062063 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9301;AVGPOST=0.9990;RSQ=0.9942;ERATE=0.0004;THETA=0.0004;AC=2032;AN=2184 GT:DS:GL:BD 0.93040293 1
1 234062108 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.3770;AVGPOST=0.9959;RSQ=0.9934;ERATE=0.0005;THETA=0.0002;AC=824;AN=2184 GT:DS:GL:BD 0.37728938 0
1 234062126 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7577;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234062171 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.973;LDAF=0.0238;AVGPOST=0.9990;RSQ=0.9822;ERATE=0.0003;THETA=0.0004;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 234062192 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6710;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234062251 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1055;AVGPOST=0.9990;RSQ=0.9956;ERATE=0.0004;THETA=0.0002;AC=230;AN=2184 GT:DS:GL:BD 0.10531136 0
1 234062344 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0053;AVGPOST=0.9976;RSQ=0.8167;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234062367 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0110;AVGPOST=0.9998;RSQ=0.9899;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234062467 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0022;AVGPOST=0.9986;RSQ=0.7284;ERATE=0.0011;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234062501 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234062529 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6205;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234062546 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0080;AVGPOST=0.9993;RSQ=0.9672;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 234062708 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0265;AVGPOST=0.9992;RSQ=0.9865;ERATE=0.0004;THETA=0.0002;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 234062709 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0942;AVGPOST=0.9984;RSQ=0.9929;ERATE=0.0004;THETA=0.0004;AC=203;AN=2184 GT:DS:GL:BD 0.09294872 0
1 234062713 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0158;AVGPOST=0.9991;RSQ=0.9750;ERATE=0.0005;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 234062739 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.7407;AVGPOST=0.9989;RSQ=0.9983;ERATE=0.0003;THETA=0.0004;AC=1619;AN=2184 GT:DS:GL:BD 0.74130034 1
1 234062773 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6549;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234062776 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4540;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234062881 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.903;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.6973;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234062911 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0269;AVGPOST=0.9995;RSQ=0.9936;ERATE=0.0003;THETA=0.0003;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 234062943 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0263;AVGPOST=0.9994;RSQ=0.9909;ERATE=0.0003;THETA=0.0004;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 234062978 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0152;AVGPOST=0.9998;RSQ=0.9948;ERATE=0.0003;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 234063048 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1065;AVGPOST=0.9982;RSQ=0.9931;ERATE=0.0003;THETA=0.0005;AC=230;AN=2184 GT:DS:GL:BD 0.10531136 0
1 234063073 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0423;AVGPOST=0.9988;RSQ=0.9892;ERATE=0.0003;THETA=0.0002;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 234063089 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.988;LDAF=0.1053;AVGPOST=0.9990;RSQ=0.9956;ERATE=0.0005;THETA=0.0005;AC=230;AN=2184 GT:DS:GL:BD 0.10531136 0
1 234063140 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.933;LDAF=0.0155;AVGPOST=0.9979;RSQ=0.9504;ERATE=0.0003;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 234063158 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.3848;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234063197 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.732;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.7964;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234063261 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8167;ERATE=0.0005;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234063281 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4140;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234063283 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5601;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234063312 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0095;AVGPOST=0.9994;RSQ=0.9690;ERATE=0.0003;THETA=0.0007;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234063387 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.5084;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234063414 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.621;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4370;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234063436 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234063490 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6211;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234063516 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1054;AVGPOST=0.9993;RSQ=0.9968;ERATE=0.0003;THETA=0.0002;AC=230;AN=2184 GT:DS:GL:BD 0.10531136 0
1 234063543 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5177;AVGPOST=0.9956;RSQ=0.9927;ERATE=0.0005;THETA=0.0006;AC=1126;AN=2184 GT:DS:GL:BD 0.51556778 1
1 234063624 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0949;AVGPOST=0.9989;RSQ=0.9950;ERATE=0.0003;THETA=0.0001;AC=205;AN=2184 GT:DS:GL:BD 0.09386447 0
1 234063631 . TA T 346 PASS INDEL;BAVGPOST=0.995;BRSQ=0.723;LDAF=0.0056;AVGPOST=0.9970;RSQ=0.7891;ERATE=0.0005;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234063796 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4227;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234063801 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3983;AVGPOST=0.9960;RSQ=0.9935;ERATE=0.0010;THETA=0.0003;AC=872;AN=2184 GT:DS:GL:BD 0.39926741 0
1 234063821 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0261;AVGPOST=0.9998;RSQ=0.9969;ERATE=0.0003;THETA=0.0002;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 234063847 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0262;AVGPOST=0.9993;RSQ=0.9881;ERATE=0.0004;THETA=0.0002;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 234063911 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.765;LDAF=0.0035;AVGPOST=0.9974;RSQ=0.7073;ERATE=0.0006;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234063912 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3418;AVGPOST=0.9989;RSQ=0.9983;ERATE=0.0004;THETA=0.0002;AC=747;AN=2184 GT:DS:GL:BD 0.34203297 0
1 234064012 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0233;AVGPOST=0.9999;RSQ=0.9980;ERATE=0.0003;THETA=0.0004;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 234064021 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4149;AVGPOST=0.9980;RSQ=0.9964;ERATE=0.0008;THETA=0.0002;AC=908;AN=2184 GT:DS:GL:BD 0.41575092 0
1 234064060 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4899;AVGPOST=0.9990;RSQ=0.9983;ERATE=0.0004;THETA=0.0003;AC=1069;AN=2184 GT:DS:GL:BD 0.48946887 0
1 234064070 . CTGAG C 676 PASS INDEL;BAVGPOST=0.999;BRSQ=0.797;LDAF=0.0043;AVGPOST=0.9978;RSQ=0.7967;ERATE=0.0004;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234064094 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0233;AVGPOST=0.9991;RSQ=0.9839;ERATE=0.0004;THETA=0.0005;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 234064160 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3998;AVGPOST=0.9981;RSQ=0.9966;ERATE=0.0006;THETA=0.0003;AC=873;AN=2184 GT:DS:GL:BD 0.39972529 0
1 234064198 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6151;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234064301 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.768;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6591;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234064302 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.1047;AVGPOST=0.9996;RSQ=0.9980;ERATE=0.0003;THETA=0.0003;AC=228;AN=2184 GT:DS:GL:BD 0.10439561 0
1 234064317 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9309;AVGPOST=0.9999;RSQ=0.9994;ERATE=0.0003;THETA=0.0008;AC=2033;AN=2184 GT:DS:GL:BD 0.93086082 1
1 234064446 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0157;AVGPOST=0.9998;RSQ=0.9934;ERATE=0.0003;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 234064448 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0021;AVGPOST=0.9982;RSQ=0.6357;ERATE=0.0003;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234064466 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0008;AVGPOST=0.9988;RSQ=0.3691;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234064487 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.648;LDAF=0.0033;AVGPOST=0.9973;RSQ=0.7053;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234064570 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0111;AVGPOST=0.9997;RSQ=0.9867;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234064576 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0157;AVGPOST=0.9979;RSQ=0.9557;ERATE=0.0003;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 234064621 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6222;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234064643 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.749;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4883;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234064668 . AC A 509 PASS INDEL;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0066;AVGPOST=0.9996;RSQ=0.9698;ERATE=0.0004;THETA=0.0001;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234064743 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9335;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234064799 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0056;AVGPOST=0.9980;RSQ=0.8421;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234064872 . A AAT 20910 PASS INDEL;BAVGPOST=0.989;BRSQ=0.980;LDAF=0.5157;AVGPOST=0.9946;RSQ=0.9913;ERATE=0.0003;THETA=0.0003;AC=1126;AN=2184 GT:DS:GL:BD 0.51556778 1
1 234064876 rs10632102 T TAC 78884 PASS INDEL;BAVGPOST=0.982;BRSQ=0.978;LDAF=0.5156;AVGPOST=0.9918;RSQ=0.9872;ERATE=0.0014;THETA=0.0008;AC=1125;AN=2184 GT:DS:GL:BD 0.51510990 1
1 234064877 . A ACC 19867 PASS INDEL;BAVGPOST=0.979;BRSQ=0.970;LDAF=0.5120;AVGPOST=0.9904;RSQ=0.9846;ERATE=0.0009;THETA=0.0007;AC=1119;AN=2184 GT:DS:GL:BD 0.51236266 1
1 234064958 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5160;AVGPOST=0.9984;RSQ=0.9970;ERATE=0.0006;THETA=0.0002;AC=1126;AN=2184 GT:DS:GL:BD 0.51556778 1
1 234065042 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0238;AVGPOST=0.9989;RSQ=0.9798;ERATE=0.0003;THETA=0.0004;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 234065180 . CT C 92 PASS INDEL;BAVGPOST=0.999;BRSQ=0.807;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.9098;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234065185 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0261;AVGPOST=0.9998;RSQ=0.9962;ERATE=0.0004;THETA=0.0002;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 234065220 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234065232 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.5175;AVGPOST=0.9973;RSQ=0.9961;ERATE=0.0006;THETA=0.0003;AC=1128;AN=2184 GT:DS:GL:BD 0.51648355 1
1 234065250 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2880;AVGPOST=0.9988;RSQ=0.9976;ERATE=0.0004;THETA=0.0003;AC=629;AN=2184 GT:DS:GL:BD 0.28800365 0
1 234065345 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.5159;AVGPOST=0.9986;RSQ=0.9975;ERATE=0.0004;THETA=0.0002;AC=1126;AN=2184 GT:DS:GL:BD 0.51556778 1
1 234065503 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6958;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234065562 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234065580 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9309;AVGPOST=0.9998;RSQ=0.9989;ERATE=0.0003;THETA=0.0003;AC=2033;AN=2184 GT:DS:GL:BD 0.93086082 1
1 234065616 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5191;AVGPOST=0.9977;RSQ=0.9960;ERATE=0.0011;THETA=0.0004;AC=1132;AN=2184 GT:DS:GL:BD 0.51831502 1
1 234065809 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0112;AVGPOST=0.9995;RSQ=0.9786;ERATE=0.0003;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234065820 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3744;AVGPOST=0.9973;RSQ=0.9953;ERATE=0.0008;THETA=0.0001;AC=819;AN=2184 GT:DS:GL:BD 0.37500000 0
1 234065883 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.852;LDAF=0.0078;AVGPOST=0.9967;RSQ=0.8414;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234065915 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.864;LDAF=0.0098;AVGPOST=0.9976;RSQ=0.8987;ERATE=0.0006;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234065915 . G GA 259 PASS INDEL;BAVGPOST=0.997;BRSQ=0.803;LDAF=0.0097;AVGPOST=0.9984;RSQ=0.9232;ERATE=0.0005;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234066006 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.2859;AVGPOST=0.9985;RSQ=0.9970;ERATE=0.0005;THETA=0.0004;AC=625;AN=2184 GT:DS:GL:BD 0.28617215 0
1 234066024 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234066128 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0071;AVGPOST=0.9995;RSQ=0.9659;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234066132 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0113;AVGPOST=0.9994;RSQ=0.9746;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234066204 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.2864;AVGPOST=0.9991;RSQ=0.9982;ERATE=0.0003;THETA=0.0003;AC=626;AN=2184 GT:DS:GL:BD 0.28663003 0
1 234066215 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234066315 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234066333 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5161;AVGPOST=0.9987;RSQ=0.9976;ERATE=0.0005;THETA=0.0003;AC=1126;AN=2184 GT:DS:GL:BD 0.51556778 1
1 234066340 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0264;AVGPOST=0.9993;RSQ=0.9915;ERATE=0.0003;THETA=0.0006;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 234066379 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9300;AVGPOST=0.9984;RSQ=0.9917;ERATE=0.0003;THETA=0.0004;AC=2032;AN=2184 GT:DS:GL:BD 0.93040293 1
1 234066398 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0088;AVGPOST=0.9981;RSQ=0.9171;ERATE=0.0011;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 234066480 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234066506 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9306;AVGPOST=0.9991;RSQ=0.9948;ERATE=0.0004;THETA=0.0004;AC=2033;AN=2184 GT:DS:GL:BD 0.93086082 1
1 234066523 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5313;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234066531 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7882;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234066563 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.961;LDAF=0.2608;AVGPOST=0.9887;RSQ=0.9770;ERATE=0.0005;THETA=0.0001;AC=570;AN=2184 GT:DS:GL:BD 0.26098901 0
1 234066648 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3989;AVGPOST=0.9980;RSQ=0.9971;ERATE=0.0003;THETA=0.0005;AC=871;AN=2184 GT:DS:GL:BD 0.39880952 0
1 234066720 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.984;LDAF=0.3735;AVGPOST=0.9978;RSQ=0.9959;ERATE=0.0006;THETA=0.0005;AC=817;AN=2184 GT:DS:GL:BD 0.37408423 0
1 234066759 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.3736;AVGPOST=0.9957;RSQ=0.9929;ERATE=0.0011;THETA=0.0002;AC=816;AN=2184 GT:DS:GL:BD 0.37362638 0
1 234066811 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4081;AVGPOST=0.9954;RSQ=0.9920;ERATE=0.0011;THETA=0.0002;AC=892;AN=2184 GT:DS:GL:BD 0.40842491 0
1 234066944 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.5706;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234067067 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0167;AVGPOST=0.9992;RSQ=0.9786;ERATE=0.0004;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 234067152 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6819;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234067245 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.7617;AVGPOST=0.9920;RSQ=0.9869;ERATE=0.0017;THETA=0.0002;AC=1664;AN=2184 GT:DS:GL:BD 0.76190478 1
1 234067260 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0112;AVGPOST=0.9995;RSQ=0.9804;ERATE=0.0003;THETA=0.0001;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234067319 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.979;LDAF=0.0820;AVGPOST=0.9981;RSQ=0.9888;ERATE=0.0004;THETA=0.0003;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 234067350 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0157;AVGPOST=0.9994;RSQ=0.9832;ERATE=0.0003;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 234067472 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.3507;AVGPOST=0.9974;RSQ=0.9958;ERATE=0.0008;THETA=0.0003;AC=767;AN=2184 GT:DS:GL:BD 0.35119048 0
1 234067652 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.907;LDAF=0.0207;AVGPOST=0.9941;RSQ=0.8903;ERATE=0.0004;THETA=0.0003;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 234067675 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.813;LDAF=0.0059;AVGPOST=0.9972;RSQ=0.7874;ERATE=0.0003;THETA=0.0001;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234067705 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4867;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234067738 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234067763 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9718;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234067791 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0939;AVGPOST=0.9992;RSQ=0.9958;ERATE=0.0003;THETA=0.0010;AC=203;AN=2184 GT:DS:GL:BD 0.09294872 0
1 234067792 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0113;AVGPOST=0.9993;RSQ=0.9732;ERATE=0.0003;THETA=0.0006;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234067830 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.855;LDAF=0.0136;AVGPOST=0.9963;RSQ=0.8876;ERATE=0.0003;THETA=0.0002;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 234067863 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1071;AVGPOST=0.9963;RSQ=0.9852;ERATE=0.0008;THETA=0.0003;AC=230;AN=2184 GT:DS:GL:BD 0.10531136 0
1 234067894 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1134;AVGPOST=0.9984;RSQ=0.9930;ERATE=0.0006;THETA=0.0003;AC=246;AN=2184 GT:DS:GL:BD 0.11263736 0
1 234067924 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.972;LDAF=0.0271;AVGPOST=0.9976;RSQ=0.9629;ERATE=0.0006;THETA=0.0002;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 234067965 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.795;LDAF=0.0048;AVGPOST=0.9968;RSQ=0.7533;ERATE=0.0009;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234067992 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7231;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234068041 rs71574888 C CA 31712 PASS INDEL;BAVGPOST=0.990;BRSQ=0.984;LDAF=0.3404;AVGPOST=0.9896;RSQ=0.9829;ERATE=0.0026;THETA=0.0006;AC=738;AN=2184 GT:DS:GL:BD 0.33791208 0
1 234068087 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0112;AVGPOST=0.9986;RSQ=0.9534;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234068137 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.6188;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234068161 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.3491;AVGPOST=0.9977;RSQ=0.9962;ERATE=0.0004;THETA=0.0002;AC=762;AN=2184 GT:DS:GL:BD 0.34890109 0
1 234068216 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6525;ERATE=0.0003;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234068260 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0903;AVGPOST=0.9994;RSQ=0.9972;ERATE=0.0003;THETA=0.0002;AC=197;AN=2184 GT:DS:GL:BD 0.09020147 0
1 234068268 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234068332 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234068373 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7966;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234068375 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234068506 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.846;LDAF=0.0055;AVGPOST=0.9991;RSQ=0.9309;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234068558 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0940;AVGPOST=0.9984;RSQ=0.9933;ERATE=0.0004;THETA=0.0003;AC=203;AN=2184 GT:DS:GL:BD 0.09294872 0
1 234068618 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.801;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6917;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234068682 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9766;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234068743 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1058;AVGPOST=0.9994;RSQ=0.9972;ERATE=0.0005;THETA=0.0006;AC=230;AN=2184 GT:DS:GL:BD 0.10531136 0
1 234068817 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6351;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234068869 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7664;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234068881 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8546;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234068936 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0111;AVGPOST=0.9998;RSQ=0.9900;ERATE=0.0003;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234068987 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.9309;AVGPOST=0.9971;RSQ=0.9868;ERATE=0.0004;THETA=0.0003;AC=2034;AN=2184 GT:DS:GL:BD 0.93131870 1
1 234069099 . C CT 47 PASS INDEL;BAVGPOST=0.999;BRSQ=0.645;LDAF=0.0066;AVGPOST=0.9898;RSQ=0.4240;ERATE=0.0016;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234069122 . T TC 5030 PASS INDEL;BAVGPOST=0.992;BRSQ=0.962;LDAF=0.1013;AVGPOST=0.9947;RSQ=0.9787;ERATE=0.0004;THETA=0.0003;AC=222;AN=2184 GT:DS:GL:BD 0.10164835 0
1 234069124 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.962;LDAF=0.1023;AVGPOST=0.9948;RSQ=0.9791;ERATE=0.0003;THETA=0.0003;AC=224;AN=2184 GT:DS:GL:BD 0.10256410 0
1 234069125 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.962;LDAF=0.1016;AVGPOST=0.9950;RSQ=0.9800;ERATE=0.0003;THETA=0.0012;AC=222;AN=2184 GT:DS:GL:BD 0.10164835 0
1 234069257 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5912;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234069267 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0951;AVGPOST=0.9983;RSQ=0.9924;ERATE=0.0004;THETA=0.0004;AC=205;AN=2184 GT:DS:GL:BD 0.09386447 0
1 234069303 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0023;AVGPOST=0.9988;RSQ=0.7853;ERATE=0.0004;THETA=0.0022;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234069348 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0028;AVGPOST=0.9987;RSQ=0.8362;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234069443 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0770;AVGPOST=0.9983;RSQ=0.9905;ERATE=0.0004;THETA=0.0004;AC=167;AN=2184 GT:DS:GL:BD 0.07646520 0
1 234069502 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.858;LDAF=0.0102;AVGPOST=0.9962;RSQ=0.8579;ERATE=0.0005;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234069518 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0058;AVGPOST=0.9983;RSQ=0.8650;ERATE=0.0008;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234069621 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6142;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234069694 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0158;AVGPOST=0.9995;RSQ=0.9867;ERATE=0.0003;THETA=0.0001;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 234069710 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9717;ERATE=0.0003;THETA=0.0038;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234069869 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7132;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234069921 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3226;AVGPOST=0.9986;RSQ=0.9975;ERATE=0.0004;THETA=0.0002;AC=705;AN=2184 GT:DS:GL:BD 0.32280219 0
1 234070103 . G GT 2037 PASS INDEL;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0180;AVGPOST=0.9981;RSQ=0.9558;ERATE=0.0004;THETA=0.0002;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 234070125 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.782;LDAF=0.0039;AVGPOST=0.9978;RSQ=0.7814;ERATE=0.0006;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234070142 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.5067;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234070197 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0064;AVGPOST=0.9995;RSQ=0.9678;ERATE=0.0004;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234070351 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6729;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234070368 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.796;LDAF=0.0150;AVGPOST=0.9953;RSQ=0.8839;ERATE=0.0004;THETA=0.0007;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 234070387 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0094;AVGPOST=0.9993;RSQ=0.9656;ERATE=0.0004;THETA=0.0010;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234070510 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.7191;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234070544 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0246;AVGPOST=0.9991;RSQ=0.9873;ERATE=0.0004;THETA=0.0004;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 234070774 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3225;AVGPOST=0.9983;RSQ=0.9971;ERATE=0.0004;THETA=0.0008;AC=705;AN=2184 GT:DS:GL:BD 0.32280219 0
1 234070890 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0768;AVGPOST=0.9998;RSQ=0.9986;ERATE=0.0003;THETA=0.0008;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 234070891 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234071018 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0023;AVGPOST=0.9984;RSQ=0.7052;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234071089 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6996;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234071165 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.7079;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234071176 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4037;AVGPOST=0.9978;RSQ=0.9968;ERATE=0.0005;THETA=0.0005;AC=880;AN=2184 GT:DS:GL:BD 0.40293041 0
1 234071196 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4266;AVGPOST=0.9926;RSQ=0.9893;ERATE=0.0017;THETA=0.0003;AC=930;AN=2184 GT:DS:GL:BD 0.42582417 0
1 234071202 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.714;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7811;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234071476 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4275;AVGPOST=0.9968;RSQ=0.9953;ERATE=0.0006;THETA=0.0004;AC=932;AN=2184 GT:DS:GL:BD 0.42673993 0
1 234071612 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0236;AVGPOST=0.9995;RSQ=0.9938;ERATE=0.0003;THETA=0.0002;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 234071667 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9375;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234071694 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0055;AVGPOST=0.9987;RSQ=0.9127;ERATE=0.0004;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234071696 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0065;AVGPOST=0.9997;RSQ=0.9798;ERATE=0.0003;THETA=0.0009;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234071869 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.6063;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234071959 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.919;LDAF=0.0157;AVGPOST=0.9984;RSQ=0.9521;ERATE=0.0004;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 234071964 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6336;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234071989 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0124;AVGPOST=0.9984;RSQ=0.9511;ERATE=0.0004;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 234072007 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.968;LDAF=0.0255;AVGPOST=0.9994;RSQ=0.9915;ERATE=0.0003;THETA=0.0004;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 234072015 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234072262 rs67883909 TCTC T 27070 PASS INDEL;BAVGPOST=0.981;BRSQ=0.965;LDAF=0.4001;AVGPOST=0.9710;RSQ=0.9555;ERATE=0.0041;THETA=0.0010;AC=874;AN=2184 GT:DS:GL:BD 0.40018314 0
1 234072278 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0041;AVGPOST=0.9981;RSQ=0.8521;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234072293 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.891;LDAF=0.0073;AVGPOST=0.9991;RSQ=0.9458;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234072356 . TCTC T 56 PASS INDEL;BAVGPOST=0.998;BRSQ=0.729;LDAF=0.0072;AVGPOST=0.9941;RSQ=0.6678;ERATE=0.0034;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234072367 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8037;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234072474 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5407;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234072480 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0026;AVGPOST=0.9971;RSQ=0.5904;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234072590 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0056;AVGPOST=0.9994;RSQ=0.9515;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234072613 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0531;AVGPOST=0.9993;RSQ=0.9936;ERATE=0.0004;THETA=0.0004;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 234072657 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0027;AVGPOST=0.9989;RSQ=0.8286;ERATE=0.0013;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234072718 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.4684;AVGPOST=0.9973;RSQ=0.9959;ERATE=0.0003;THETA=0.0028;AC=1020;AN=2184 GT:DS:GL:BD 0.46703297 0
1 234072719 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0076;AVGPOST=0.9991;RSQ=0.9453;ERATE=0.0005;THETA=0.0046;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234072812 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8462;ERATE=0.0004;THETA=0.0152;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234072827 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0069;AVGPOST=0.9979;RSQ=0.8821;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234073104 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7921;ERATE=0.0006;THETA=0.0025;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234073162 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0021;AVGPOST=0.9975;RSQ=0.5972;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234073369 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0191;AVGPOST=0.9982;RSQ=0.9619;ERATE=0.0003;THETA=0.0007;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 234073416 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.0710;AVGPOST=0.9988;RSQ=0.9925;ERATE=0.0003;THETA=0.0013;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 234073510 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0061;AVGPOST=0.9996;RSQ=0.9773;ERATE=0.0003;THETA=0.0130;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234073592 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0046;AVGPOST=0.9988;RSQ=0.8960;ERATE=0.0006;THETA=0.0044;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234073628 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8656;ERATE=0.0003;THETA=0.0092;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234073691 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.3453;AVGPOST=0.9956;RSQ=0.9926;ERATE=0.0012;THETA=0.0050;AC=751;AN=2184 GT:DS:GL:BD 0.34386447 0
1 234073788 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1310;AVGPOST=0.9961;RSQ=0.9884;ERATE=0.0003;THETA=0.0008;AC=286;AN=2184 GT:DS:GL:BD 0.13095239 0
1 234073797 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7366;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234073908 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0348;AVGPOST=0.9979;RSQ=0.9779;ERATE=0.0004;THETA=0.0011;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 234073909 . TAGG T 1447 PASS INDEL;BAVGPOST=0.997;BRSQ=0.924;LDAF=0.0119;AVGPOST=0.9978;RSQ=0.9343;ERATE=0.0003;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 234073953 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0187;AVGPOST=0.9971;RSQ=0.9399;ERATE=0.0006;THETA=0.0051;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 234073994 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.623;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8696;ERATE=0.0003;THETA=0.0041;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234074016 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234074053 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.948;LDAF=0.0337;AVGPOST=0.9965;RSQ=0.9594;ERATE=0.0003;THETA=0.0006;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 234074103 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.3932;AVGPOST=0.9952;RSQ=0.9926;ERATE=0.0006;THETA=0.0036;AC=859;AN=2184 GT:DS:GL:BD 0.39331502 0
1 234074108 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0170;AVGPOST=0.9995;RSQ=0.9862;ERATE=0.0003;THETA=0.0007;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 234074118 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0170;AVGPOST=0.9995;RSQ=0.9870;ERATE=0.0003;THETA=0.0008;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 234074150 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234074420 rs112222121 GTGGA G 82804 PASS INDEL;BAVGPOST=0.993;BRSQ=0.629;LDAF=0.9849;AVGPOST=0.9817;RSQ=0.4910;ERATE=0.0054;THETA=0.0006;AC=2169;AN=2184 GT:DS:GL:BD 0.99313188 1
1 234074447 . AATGG A 500 PASS INDEL;BAVGPOST=0.991;BRSQ=0.741;LDAF=0.0197;AVGPOST=0.9781;RSQ=0.5532;ERATE=0.0052;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234074512 . AT A 2813 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0139;AVGPOST=0.9996;RSQ=0.9865;ERATE=0.0003;THETA=0.0011;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 234074754 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234074788 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234074845 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234074869 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8326;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234074882 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0955;AVGPOST=0.9995;RSQ=0.9974;ERATE=0.0003;THETA=0.0004;AC=206;AN=2184 GT:DS:GL:BD 0.09432235 0
1 234075023 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7883;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234075045 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9990;RSQ=0.9221;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234075060 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1247;AVGPOST=0.9996;RSQ=0.9987;ERATE=0.0003;THETA=0.0002;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 234075070 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3823;AVGPOST=0.9963;RSQ=0.9945;ERATE=0.0005;THETA=0.0005;AC=837;AN=2184 GT:DS:GL:BD 0.38324177 0
1 234075098 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7896;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234075112 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0038;AVGPOST=0.9975;RSQ=0.7811;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234075125 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0140;AVGPOST=0.9991;RSQ=0.9716;ERATE=0.0003;THETA=0.0002;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 234075136 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6406;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234075201 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5859;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234075202 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234075207 . GA G 66 PASS INDEL;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4597;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234075307 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0138;AVGPOST=0.9999;RSQ=0.9970;ERATE=0.0003;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 234075345 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234075397 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0017;AVGPOST=0.9986;RSQ=0.6729;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234075457 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6436;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234075505 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234075546 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.979;LDAF=0.0550;AVGPOST=0.9972;RSQ=0.9801;ERATE=0.0003;THETA=0.0003;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 234075610 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1248;AVGPOST=1.0000;RSQ=0.9998;ERATE=0.0003;THETA=0.0002;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 234075696 . ATTAAAC A 93 PASS INDEL;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.5446;ERATE=0.0005;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234075748 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9490;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234075838 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7834;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234075888 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0843;AVGPOST=0.9995;RSQ=0.9970;ERATE=0.0003;THETA=0.0005;AC=183;AN=2184 GT:DS:GL:BD 0.08379121 0
1 234075893 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8581;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234075897 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3660;AVGPOST=0.9964;RSQ=0.9950;ERATE=0.0003;THETA=0.0003;AC=799;AN=2184 GT:DS:GL:BD 0.36584249 0
1 234075944 . GCA G 35 PASS INDEL;BAVGPOST=0.994;BRSQ=0.693;LDAF=0.0166;AVGPOST=0.9816;RSQ=0.5530;ERATE=0.0053;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234075985 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234076097 rs72141150 GAC G 1611 PASS INDEL;BAVGPOST=0.889;BRSQ=0.496;LDAF=0.1635;AVGPOST=0.8464;RSQ=0.5221;ERATE=0.0550;THETA=0.0002;AC=240;AN=2184 GT:DS:GL:BD 0.10989011 0
1 234076186 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0137;AVGPOST=1.0000;RSQ=0.9985;ERATE=0.0003;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 234076202 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.637;LDAF=0.0022;AVGPOST=0.9989;RSQ=0.8083;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234076225 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234076418 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234076583 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9323;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234076611 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6213;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234076704 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234076749 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0140;AVGPOST=0.9979;RSQ=0.9412;ERATE=0.0003;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 234076761 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234076802 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4433;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234076817 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0065;AVGPOST=0.9988;RSQ=0.9277;ERATE=0.0003;THETA=0.0036;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234076877 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8890;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234076976 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0957;AVGPOST=0.9995;RSQ=0.9974;ERATE=0.0003;THETA=0.0004;AC=206;AN=2184 GT:DS:GL:BD 0.09432235 0
1 234077027 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234077246 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9871;ERATE=0.0003;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234077258 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7601;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234077259 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0054;AVGPOST=0.9990;RSQ=0.9269;ERATE=0.0004;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234077262 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7941;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234077294 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2518;AVGPOST=0.9952;RSQ=0.9908;ERATE=0.0015;THETA=0.0004;AC=545;AN=2184 GT:DS:GL:BD 0.24954212 0
1 234077465 . C CA 7240 PASS INDEL;BAVGPOST=0.997;BRSQ=0.981;LDAF=0.0963;AVGPOST=0.9968;RSQ=0.9850;ERATE=0.0009;THETA=0.0005;AC=206;AN=2184 GT:DS:GL:BD 0.09432235 0
1 234077526 . A AT 37 PASS INDEL;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0027;AVGPOST=0.9986;RSQ=0.8128;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234077555 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234077559 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.0403;AVGPOST=0.9996;RSQ=0.9961;ERATE=0.0003;THETA=0.0005;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 234077588 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0106;AVGPOST=0.9998;RSQ=0.9898;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234077607 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.4917;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234077614 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0009;AVGPOST=0.9987;RSQ=0.3726;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234077649 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0051;AVGPOST=0.9997;RSQ=0.9701;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234077667 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8648;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234077709 rs58576140 T TG 6795 PASS INDEL;BAVGPOST=0.895;BRSQ=0.758;LDAF=0.2643;AVGPOST=0.8895;RSQ=0.7964;ERATE=0.0095;THETA=0.0005;AC=594;AN=2184 GT:DS:GL:BD 0.27197802 0
1 234077744 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.700;LDAF=0.0046;AVGPOST=0.9955;RSQ=0.6116;ERATE=0.0008;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234077810 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.669;LDAF=0.0035;AVGPOST=0.9977;RSQ=0.7409;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234077997 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.726;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6629;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234078002 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0141;AVGPOST=0.9993;RSQ=0.9765;ERATE=0.0004;THETA=0.0020;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 234078065 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8268;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234078096 . GT G 2483 PASS INDEL;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0194;AVGPOST=0.9990;RSQ=0.9773;ERATE=0.0003;THETA=0.0002;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 234078127 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0329;AVGPOST=0.9970;RSQ=0.9711;ERATE=0.0003;THETA=0.0003;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 234078128 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0327;AVGPOST=0.9968;RSQ=0.9689;ERATE=0.0004;THETA=0.0006;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 234078150 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0353;AVGPOST=0.9998;RSQ=0.9977;ERATE=0.0003;THETA=0.0003;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 234078200 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6402;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234078223 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.770;LDAF=0.0029;AVGPOST=0.9984;RSQ=0.7969;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234078269 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0200;AVGPOST=0.9982;RSQ=0.9709;ERATE=0.0003;THETA=0.0002;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 234078295 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.7232;AVGPOST=0.9922;RSQ=0.9835;ERATE=0.0009;THETA=0.0003;AC=1579;AN=2184 GT:DS:GL:BD 0.72298533 1
1 234078311 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.819;LDAF=0.0143;AVGPOST=0.9934;RSQ=0.8187;ERATE=0.0004;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 234078523 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6495;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234078570 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9206;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234078705 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9169;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234078734 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0174;AVGPOST=0.9990;RSQ=0.9759;ERATE=0.0008;THETA=0.0004;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 234078757 . T TG 184 PASS INDEL;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234078815 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0140;AVGPOST=0.9990;RSQ=0.9711;ERATE=0.0004;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 234078825 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234078842 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5552;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234079013 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.9098;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234079053 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0023;AVGPOST=0.9995;RSQ=0.9094;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234079054 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0137;AVGPOST=0.9996;RSQ=0.9888;ERATE=0.0003;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 234079077 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0100;AVGPOST=0.9988;RSQ=0.9490;ERATE=0.0003;THETA=0.0011;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 234079691 . G GA 67 PASS INDEL;BAVGPOST=0.999;BRSQ=0.595;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6345;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234079754 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0141;AVGPOST=0.9991;RSQ=0.9731;ERATE=0.0003;THETA=0.0036;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 234079897 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0022;AVGPOST=0.9996;RSQ=0.9318;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234079970 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.887;LDAF=0.0075;AVGPOST=0.9989;RSQ=0.9307;ERATE=0.0003;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234080036 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.6044;AVGPOST=0.9947;RSQ=0.9911;ERATE=0.0013;THETA=0.0008;AC=1322;AN=2184 GT:DS:GL:BD 0.60531133 1
1 234080055 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0052;AVGPOST=0.9996;RSQ=0.9663;ERATE=0.0003;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234080281 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7750;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234080285 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7494;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234080337 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0127;AVGPOST=0.9984;RSQ=0.9478;ERATE=0.0003;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 234080361 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0024;AVGPOST=0.9970;RSQ=0.5182;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234080409 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0137;AVGPOST=0.9996;RSQ=0.9888;ERATE=0.0003;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 234080453 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7855;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234080479 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7457;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234080525 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0025;AVGPOST=0.9993;RSQ=0.8666;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234080526 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9907;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234080589 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9406;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234080595 . C CT 5003 PASS INDEL;BAVGPOST=0.995;BRSQ=0.982;LDAF=0.1480;AVGPOST=0.9713;RSQ=0.9161;ERATE=0.0006;THETA=0.0002;AC=320;AN=2184 GT:DS:GL:BD 0.14652015 0
1 234080597 rs11413006 T TA 20255 PASS INDEL;BAVGPOST=0.996;BRSQ=0.985;LDAF=0.1243;AVGPOST=0.9968;RSQ=0.9898;ERATE=0.0003;THETA=0.0005;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 234080598 . A AC 5380 PASS INDEL;BAVGPOST=0.996;BRSQ=0.983;LDAF=0.1224;AVGPOST=0.9964;RSQ=0.9883;ERATE=0.0004;THETA=0.0005;AC=269;AN=2184 GT:DS:GL:BD 0.12316850 0
1 234080599 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.3354;AVGPOST=0.9959;RSQ=0.9939;ERATE=0.0004;THETA=0.0005;AC=732;AN=2184 GT:DS:GL:BD 0.33516484 0
1 234080615 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.1384;AVGPOST=0.9970;RSQ=0.9926;ERATE=0.0003;THETA=0.0007;AC=303;AN=2184 GT:DS:GL:BD 0.13873626 0
1 234080626 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5778;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234080637 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0003;THETA=0.0037;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234080654 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7526;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234080742 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9733;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234080863 . AT A 95 PASS INDEL;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7568;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234080872 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2076;AVGPOST=0.9975;RSQ=0.9952;ERATE=0.0003;THETA=0.0004;AC=453;AN=2184 GT:DS:GL:BD 0.20741758 0
1 234081033 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0842;AVGPOST=0.9995;RSQ=0.9967;ERATE=0.0003;THETA=0.0002;AC=183;AN=2184 GT:DS:GL:BD 0.08379121 0
1 234081039 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0124;AVGPOST=0.9988;RSQ=0.9586;ERATE=0.0004;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 234081125 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6314;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234081170 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9992;RSQ=0.9371;ERATE=0.0004;THETA=0.0013;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234081255 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0013;AVGPOST=0.9997;RSQ=0.9159;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234081276 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0111;AVGPOST=0.9991;RSQ=0.9689;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234081294 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0080;AVGPOST=0.9995;RSQ=0.9710;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 234081344 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7822;ERATE=0.0003;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234081410 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6902;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234081509 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234081577 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1477;AVGPOST=0.9981;RSQ=0.9945;ERATE=0.0005;THETA=0.0006;AC=322;AN=2184 GT:DS:GL:BD 0.14743590 0
1 234081732 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8426;ERATE=0.0006;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234081890 . T TA 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0024;AVGPOST=0.9975;RSQ=0.6406;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234082063 . CT C 10 PASS INDEL;BAVGPOST=0.999;BRSQ=0.664;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6432;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234082065 . GA G 29 PASS INDEL;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5598;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234082176 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8758;ERATE=0.0007;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234082231 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.596;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4765;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234082394 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0948;AVGPOST=0.9985;RSQ=0.9927;ERATE=0.0003;THETA=0.0002;AC=204;AN=2184 GT:DS:GL:BD 0.09340660 0
1 234082486 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0030;AVGPOST=0.9990;RSQ=0.8614;ERATE=0.0005;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234082605 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7044;ERATE=0.0003;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234082735 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0029;AVGPOST=0.9998;RSQ=0.9618;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234082821 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0130;AVGPOST=0.9995;RSQ=0.9825;ERATE=0.0003;THETA=0.0011;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 234083013 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0224;AVGPOST=0.9996;RSQ=0.9918;ERATE=0.0003;THETA=0.0004;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 234083017 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0029;AVGPOST=0.9990;RSQ=0.8531;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234083226 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.813;LDAF=0.0079;AVGPOST=0.9980;RSQ=0.9044;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234083243 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0055;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234083272 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0371;AVGPOST=0.9984;RSQ=0.9815;ERATE=0.0005;THETA=0.0004;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 234083290 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0030;AVGPOST=0.9992;RSQ=0.8798;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234083302 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0044;AVGPOST=0.9983;RSQ=0.8508;ERATE=0.0005;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234083395 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7428;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234083429 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0160;AVGPOST=0.9990;RSQ=0.9743;ERATE=0.0003;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 234083499 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0205;AVGPOST=0.9953;RSQ=0.9097;ERATE=0.0006;THETA=0.0004;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 234083539 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0859;AVGPOST=0.9989;RSQ=0.9939;ERATE=0.0004;THETA=0.0004;AC=187;AN=2184 GT:DS:GL:BD 0.08562271 0
1 234083603 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.667;LDAF=0.0053;AVGPOST=0.9984;RSQ=0.8571;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234083672 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.711;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5693;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234083777 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.1189;AVGPOST=0.9941;RSQ=0.9787;ERATE=0.0004;THETA=0.0001;AC=256;AN=2184 GT:DS:GL:BD 0.11721612 0
1 234083782 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.952;LDAF=0.0876;AVGPOST=0.9880;RSQ=0.9395;ERATE=0.0026;THETA=0.0005;AC=182;AN=2184 GT:DS:GL:BD 0.08333334 0
1 234083783 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.849;LDAF=0.0032;AVGPOST=0.9971;RSQ=0.6288;ERATE=0.0014;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234083811 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7327;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234083882 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.832;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.8030;ERATE=0.0004;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234083904 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234083923 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0069;AVGPOST=0.9986;RSQ=0.9206;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234084058 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0366;AVGPOST=0.9947;RSQ=0.9516;ERATE=0.0004;THETA=0.0002;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 234084174 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0035;AVGPOST=0.9989;RSQ=0.8805;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234084190 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0861;AVGPOST=0.9989;RSQ=0.9946;ERATE=0.0003;THETA=0.0007;AC=188;AN=2184 GT:DS:GL:BD 0.08608059 0
1 234084349 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.594;LDAF=0.0017;AVGPOST=0.9982;RSQ=0.5430;ERATE=0.0006;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234084415 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0138;AVGPOST=0.9982;RSQ=0.9520;ERATE=0.0004;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 234084464 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.961;LDAF=0.0665;AVGPOST=0.9942;RSQ=0.9666;ERATE=0.0004;THETA=0.0004;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 234084516 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0076;AVGPOST=0.9942;RSQ=0.7290;ERATE=0.0006;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234084529 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.942;BRSQ=0.897;LDAF=0.5684;AVGPOST=0.9138;RSQ=0.8681;ERATE=0.0165;THETA=0.0005;AC=1272;AN=2184 GT:DS:GL:BD 0.58241761 1
1 234084607 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0036;AVGPOST=0.9978;RSQ=0.8134;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234084618 . GC G 296 PASS INDEL;BAVGPOST=0.998;BRSQ=0.781;LDAF=0.0050;AVGPOST=0.9964;RSQ=0.7678;ERATE=0.0003;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234084663 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.2458;AVGPOST=0.9904;RSQ=0.9818;ERATE=0.0004;THETA=0.0038;AC=541;AN=2184 GT:DS:GL:BD 0.24771062 0
1 234084723 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.819;LDAF=0.0051;AVGPOST=0.9989;RSQ=0.9019;ERATE=0.0003;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234084838 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0143;AVGPOST=0.9997;RSQ=0.9899;ERATE=0.0003;THETA=0.0006;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 234084854 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.671;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6626;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234084865 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234085194 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7533;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234085298 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5260;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234085344 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6236;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234085350 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0030;AVGPOST=0.9990;RSQ=0.8537;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234085372 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0223;AVGPOST=0.9983;RSQ=0.9688;ERATE=0.0005;THETA=0.0004;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 234085378 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9555;ERATE=0.0003;THETA=0.0036;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234085442 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0084;AVGPOST=0.9988;RSQ=0.9445;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 234085443 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0085;AVGPOST=0.9986;RSQ=0.9347;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 234085467 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.746;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5437;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234085468 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234085758 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234085808 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5929;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234085838 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0083;AVGPOST=0.9977;RSQ=0.8859;ERATE=0.0004;THETA=0.0010;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234085929 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.731;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5198;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234085993 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.624;LDAF=0.0020;AVGPOST=0.9969;RSQ=0.3036;ERATE=0.0008;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234086025 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0045;AVGPOST=0.9979;RSQ=0.7959;ERATE=0.0006;THETA=0.0013;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234086063 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.830;LDAF=0.0037;AVGPOST=0.9984;RSQ=0.8114;ERATE=0.0006;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234086067 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.636;LDAF=0.0107;AVGPOST=0.9864;RSQ=0.5140;ERATE=0.0010;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 234086131 rs72129185 C CA 1231 PASS INDEL;BAVGPOST=0.537;BRSQ=0.216;LDAF=0.4982;AVGPOST=0.6211;RSQ=0.3544;ERATE=0.0292;THETA=0.0004;AC=972;AN=2184 GT:DS:GL:BD 0.44505495 0
1 234086374 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4659;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234086530 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0046;AVGPOST=0.9981;RSQ=0.8437;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234086597 . T TA 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234086606 . CT C 2788 PASS INDEL;BAVGPOST=0.994;BRSQ=0.834;LDAF=0.0192;AVGPOST=0.9905;RSQ=0.8189;ERATE=0.0005;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 234086611 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0062;AVGPOST=0.9995;RSQ=0.9653;ERATE=0.0004;THETA=0.0019;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234086722 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0215;AVGPOST=0.9984;RSQ=0.9724;ERATE=0.0003;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 234086848 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.988;LDAF=0.7184;AVGPOST=0.9872;RSQ=0.9747;ERATE=0.0008;THETA=0.0009;AC=1569;AN=2184 GT:DS:GL:BD 0.71840662 1
1 234086881 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9450;ERATE=0.0003;THETA=0.0018;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234086926 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0022;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234086940 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0058;AVGPOST=0.9996;RSQ=0.9744;ERATE=0.0003;THETA=0.0009;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234086967 . TA T 359 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9376;ERATE=0.0004;THETA=0.0041;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234087041 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234087103 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8222;ERATE=0.0009;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234087187 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0137;AVGPOST=0.9983;RSQ=0.9506;ERATE=0.0003;THETA=0.0011;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 234087198 . T TA 65 PASS INDEL;BAVGPOST=0.989;BRSQ=0.549;LDAF=0.0190;AVGPOST=0.9771;RSQ=0.5052;ERATE=0.0081;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 234087250 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.478;LDAF=0.0017;AVGPOST=0.9981;RSQ=0.5471;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234087353 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.7012;ERATE=0.0004;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234087466 . TTG T 54 PASS INDEL;BAVGPOST=0.990;BRSQ=0.584;LDAF=0.0192;AVGPOST=0.9790;RSQ=0.5665;ERATE=0.0063;THETA=0.0019;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 234087482 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7362;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234087490 . G GT 40 PASS INDEL;BAVGPOST=0.998;BRSQ=0.575;LDAF=0.0029;AVGPOST=0.9960;RSQ=0.4769;ERATE=0.0015;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234087525 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234087570 . GGCCTCCCAAAGT G 839 PASS INDEL;BAVGPOST=0.998;BRSQ=0.820;LDAF=0.0029;AVGPOST=0.9984;RSQ=0.7805;ERATE=0.0004;THETA=0.0023;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234087592 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6555;ERATE=0.0003;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234087637 . C CAT 31 PASS INDEL;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0022;AVGPOST=0.9979;RSQ=0.5819;ERATE=0.0010;THETA=0.0062;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234087698 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0263;AVGPOST=0.9994;RSQ=0.9887;ERATE=0.0004;THETA=0.0023;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 234087725 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.8989;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234087867 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.769;LDAF=0.0044;AVGPOST=0.9974;RSQ=0.7598;ERATE=0.0003;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234087899 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0036;AVGPOST=0.9983;RSQ=0.8037;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234087902 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.879;LDAF=0.0040;AVGPOST=0.9978;RSQ=0.8100;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234087999 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8235;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234088002 . G GT 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.738;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5810;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234088121 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9506;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234088249 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7385;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234088258 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234088323 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6589;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234088380 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.815;LDAF=0.0051;AVGPOST=0.9979;RSQ=0.8380;ERATE=0.0005;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234088393 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234088614 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0033;AVGPOST=0.9994;RSQ=0.9131;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234088635 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234088884 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8858;ERATE=0.0004;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234088895 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0041;AVGPOST=0.9997;RSQ=0.9698;ERATE=0.0003;THETA=0.0043;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234088905 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234088999 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0271;AVGPOST=0.9987;RSQ=0.9832;ERATE=0.0003;THETA=0.0014;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 234089050 . GT G 70 PASS INDEL;BAVGPOST=0.999;BRSQ=0.738;LDAF=0.0028;AVGPOST=0.9959;RSQ=0.4842;ERATE=0.0007;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234089174 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.762;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234089193 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234089228 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9469;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234089304 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2588;AVGPOST=0.9967;RSQ=0.9943;ERATE=0.0003;THETA=0.0016;AC=564;AN=2184 GT:DS:GL:BD 0.25824177 0
1 234089425 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9895;ERATE=0.0003;THETA=0.0057;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234089435 . C CAG 6924 PASS INDEL;BAVGPOST=0.995;BRSQ=0.970;LDAF=0.0832;AVGPOST=0.9941;RSQ=0.9713;ERATE=0.0004;THETA=0.0025;AC=182;AN=2184 GT:DS:GL:BD 0.08333334 0
1 234089438 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.630;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6850;ERATE=0.0004;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234089439 rs60231061 T TA 33456 PASS INDEL;BAVGPOST=0.990;BRSQ=0.981;LDAF=0.2576;AVGPOST=0.9913;RSQ=0.9857;ERATE=0.0003;THETA=0.0007;AC=562;AN=2184 GT:DS:GL:BD 0.25732601 0
1 234089440 . A AC 9039 PASS INDEL;BAVGPOST=0.990;BRSQ=0.981;LDAF=0.2567;AVGPOST=0.9902;RSQ=0.9837;ERATE=0.0004;THETA=0.0122;AC=561;AN=2184 GT:DS:GL:BD 0.25686812 0
1 234089462 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.651;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0004;THETA=0.0081;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234089610 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0023;AVGPOST=0.9998;RSQ=0.9548;ERATE=0.0003;THETA=0.0127;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234089647 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0059;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234089695 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9132;ERATE=0.0004;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234089754 . C CT 973 PASS INDEL;BAVGPOST=0.755;BRSQ=0.237;LDAF=0.2536;AVGPOST=0.7230;RSQ=0.3621;ERATE=0.0267;THETA=0.0019;AC=344;AN=2184 GT:DS:GL:BD 0.15750916 0
1 234089844 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.542;LDAF=0.0043;AVGPOST=0.9926;RSQ=0.3186;ERATE=0.0006;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234089870 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.947;BRSQ=0.439;LDAF=0.9490;AVGPOST=0.9355;RSQ=0.4761;ERATE=0.0109;THETA=0.0071;AC=2120;AN=2184 GT:DS:GL:BD 0.97069597 1
1 234089878 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.645;LDAF=0.0024;AVGPOST=0.9970;RSQ=0.4309;ERATE=0.0006;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234089954 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.861;LDAF=0.0976;AVGPOST=0.9706;RSQ=0.8769;ERATE=0.0015;THETA=0.0099;AC=202;AN=2184 GT:DS:GL:BD 0.09249084 0
1 234089981 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.869;LDAF=0.0257;AVGPOST=0.9911;RSQ=0.8826;ERATE=0.0005;THETA=0.0027;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 234089988 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.960;BRSQ=0.918;LDAF=0.2505;AVGPOST=0.9508;RSQ=0.9085;ERATE=0.0031;THETA=0.0264;AC=540;AN=2184 GT:DS:GL:BD 0.24725275 0
1 234090047 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.512;LDAF=0.0018;AVGPOST=0.9974;RSQ=0.4226;ERATE=0.0006;THETA=0.0139;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234090464 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7839;ERATE=0.0003;THETA=0.0193;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234090588 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.754;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7425;ERATE=0.0005;THETA=0.0201;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234090592 . A AT 446 PASS INDEL;BAVGPOST=0.995;BRSQ=0.528;LDAF=0.0063;AVGPOST=0.9928;RSQ=0.5642;ERATE=0.0015;THETA=0.0170;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234090626 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.919;BRSQ=0.855;LDAF=0.4057;AVGPOST=0.9183;RSQ=0.8796;ERATE=0.0141;THETA=0.0218;AC=864;AN=2184 GT:DS:GL:BD 0.39560440 0
1 234090650 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.951;BRSQ=0.792;LDAF=0.1206;AVGPOST=0.9552;RSQ=0.8364;ERATE=0.0048;THETA=0.0039;AC=233;AN=2184 GT:DS:GL:BD 0.10668498 0
1 234090674 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.6512;ERATE=0.0003;THETA=0.0081;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234090699 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.751;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5403;ERATE=0.0004;THETA=0.0228;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234090746 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.711;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6016;ERATE=0.0006;THETA=0.0128;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234090751 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.612;LDAF=0.0027;AVGPOST=0.9977;RSQ=0.6975;ERATE=0.0004;THETA=0.0109;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234090777 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.570;LDAF=0.0025;AVGPOST=0.9984;RSQ=0.7177;ERATE=0.0004;THETA=0.0096;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234090791 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.578;LDAF=0.0046;AVGPOST=0.9968;RSQ=0.7328;ERATE=0.0005;THETA=0.0291;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234090848 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0047;AVGPOST=0.9979;RSQ=0.8172;ERATE=0.0004;THETA=0.0433;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234090864 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.780;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5545;ERATE=0.0006;THETA=0.0111;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234090870 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.818;LDAF=0.0453;AVGPOST=0.9829;RSQ=0.8588;ERATE=0.0003;THETA=0.0077;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 234090871 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.809;LDAF=0.0701;AVGPOST=0.9706;RSQ=0.8258;ERATE=0.0039;THETA=0.0183;AC=133;AN=2184 GT:DS:GL:BD 0.06089744 0
1 234090903 . G GA 369 PASS INDEL;BAVGPOST=0.999;BRSQ=0.768;LDAF=0.0039;AVGPOST=0.9963;RSQ=0.5876;ERATE=0.0015;THETA=0.0183;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234090931 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0018;AVGPOST=0.9996;RSQ=0.8990;ERATE=0.0003;THETA=0.0192;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234091027 . CAAG C 237 PASS INDEL;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6551;ERATE=0.0004;THETA=0.0148;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234091091 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8303;ERATE=0.0015;THETA=0.0245;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234091098 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6839;ERATE=0.0004;THETA=0.0147;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234091114 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0070;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234091118 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0040;AVGPOST=0.9987;RSQ=0.8785;ERATE=0.0003;THETA=0.0160;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234091139 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.936;LDAF=0.0336;AVGPOST=0.9951;RSQ=0.9524;ERATE=0.0004;THETA=0.0140;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 234091141 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0003;THETA=0.0118;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234091170 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.954;LDAF=0.0338;AVGPOST=0.9974;RSQ=0.9720;ERATE=0.0004;THETA=0.0157;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 234091174 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6180;ERATE=0.0003;THETA=0.0215;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234091178 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0221;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234091209 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.939;LDAF=0.0107;AVGPOST=0.9988;RSQ=0.9524;ERATE=0.0003;THETA=0.0264;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234091238 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0047;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234091379 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.955;LDAF=0.1048;AVGPOST=0.9884;RSQ=0.9523;ERATE=0.0012;THETA=0.0108;AC=224;AN=2184 GT:DS:GL:BD 0.10256410 0
1 234091496 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0045;AVGPOST=0.9989;RSQ=0.9065;ERATE=0.0003;THETA=0.0040;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234091506 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.727;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.5855;ERATE=0.0007;THETA=0.0040;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234091624 rs74545140 C CTT 2581 PASS INDEL;BAVGPOST=0.488;BRSQ=0.080;LDAF=0.6167;AVGPOST=0.6231;RSQ=0.2988;ERATE=0.0235;THETA=0.0110;AC=1437;AN=2184 GT:DS:GL:BD 0.65796703 1
1 234091640 . T TTC 41 PASS INDEL;BAVGPOST=0.998;BRSQ=0.582;LDAF=0.0058;AVGPOST=0.9952;RSQ=0.6670;ERATE=0.0008;THETA=0.0056;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234091668 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.730;LDAF=0.0051;AVGPOST=0.9962;RSQ=0.6967;ERATE=0.0005;THETA=0.0078;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234091759 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.941;LDAF=0.2080;AVGPOST=0.9740;RSQ=0.9448;ERATE=0.0008;THETA=0.0005;AC=450;AN=2184 GT:DS:GL:BD 0.20604396 0
1 234091791 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.493;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.6548;ERATE=0.0006;THETA=0.0035;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234091824 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4723;ERATE=0.0003;THETA=0.0046;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234091984 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.970;LDAF=0.0310;AVGPOST=0.9980;RSQ=0.9783;ERATE=0.0003;THETA=0.0032;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 234091998 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5338;ERATE=0.0003;THETA=0.0042;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234092093 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0112;AVGPOST=0.9990;RSQ=0.9698;ERATE=0.0003;THETA=0.0012;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 234092364 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0013;AVGPOST=0.9994;RSQ=0.8373;ERATE=0.0003;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234092381 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.0076;AVGPOST=0.9990;RSQ=0.9407;ERATE=0.0004;THETA=0.0059;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234092478 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.0029;AVGPOST=0.9994;RSQ=0.9002;ERATE=0.0004;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234092504 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.680;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8538;ERATE=0.0003;THETA=0.0045;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234092567 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1391;AVGPOST=0.9936;RSQ=0.9784;ERATE=0.0004;THETA=0.0060;AC=304;AN=2184 GT:DS:GL:BD 0.13919415 0
1 234092603 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234092645 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.582;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234093106 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8271;ERATE=0.0003;THETA=0.0013;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234093123 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9420;ERATE=0.0003;THETA=0.0034;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234093247 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234093331 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0706;AVGPOST=0.9940;RSQ=0.9642;ERATE=0.0007;THETA=0.0004;AC=153;AN=2184 GT:DS:GL:BD 0.07005495 0
1 234093378 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5072;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234093492 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.959;LDAF=0.9634;AVGPOST=0.9916;RSQ=0.9044;ERATE=0.0019;THETA=0.0007;AC=2109;AN=2184 GT:DS:GL:BD 0.96565932 1
1 234093561 rs71734550 C CA 5491 PASS INDEL;BAVGPOST=0.977;BRSQ=0.879;LDAF=0.1017;AVGPOST=0.9554;RSQ=0.8127;ERATE=0.0122;THETA=0.0005;AC=202;AN=2184 GT:DS:GL:BD 0.09249084 0
1 234093619 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0004;AVGPOST=0.9998;RSQ=0.8054;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234093694 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2254;AVGPOST=0.9976;RSQ=0.9948;ERATE=0.0004;THETA=0.0014;AC=493;AN=2184 GT:DS:GL:BD 0.22573259 0
1 234093897 . C CG 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234093948 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0241;AVGPOST=0.9995;RSQ=0.9922;ERATE=0.0003;THETA=0.0003;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 234094037 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8448;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234094067 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6368;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234094093 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6950;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234094110 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.958;LDAF=0.0260;AVGPOST=0.9975;RSQ=0.9590;ERATE=0.0004;THETA=0.0003;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 234094148 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7794;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234094366 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0166;AVGPOST=0.9996;RSQ=0.9903;ERATE=0.0003;THETA=0.0002;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 234094466 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6526;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234094562 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2262;AVGPOST=0.9987;RSQ=0.9968;ERATE=0.0004;THETA=0.0004;AC=494;AN=2184 GT:DS:GL:BD 0.22619048 0
1 234094565 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234094619 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.689;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6406;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234094655 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.784;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8672;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234094738 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234094787 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.6042;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234094866 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.2346;AVGPOST=0.9980;RSQ=0.9954;ERATE=0.0003;THETA=0.0003;AC=513;AN=2184 GT:DS:GL:BD 0.23489010 0
1 234094872 . C CTT 83 PASS INDEL;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234094876 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.2258;AVGPOST=0.9986;RSQ=0.9966;ERATE=0.0004;THETA=0.0002;AC=494;AN=2184 GT:DS:GL:BD 0.22619048 0
1 234095114 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7084;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234095158 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6457;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234095208 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.733;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.7068;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234095224 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234095258 . A AT 8 PASS INDEL;BAVGPOST=0.997;BRSQ=0.493;LDAF=0.0059;AVGPOST=0.9909;RSQ=0.4129;ERATE=0.0019;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234095273 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0088;AVGPOST=0.9995;RSQ=0.9763;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 234095334 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1343;AVGPOST=0.9989;RSQ=0.9960;ERATE=0.0003;THETA=0.0005;AC=293;AN=2184 GT:DS:GL:BD 0.13415751 0
1 234095338 . AGT A 150 PASS INDEL;BAVGPOST=0.999;BRSQ=0.785;LDAF=0.0024;AVGPOST=0.9990;RSQ=0.8425;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234095361 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6055;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234095399 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234095461 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9859;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234095494 . ATTTC A 2578 PASS INDEL;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0102;AVGPOST=0.9973;RSQ=0.8949;ERATE=0.0005;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234095503 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234095665 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234095697 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7529;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234095777 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8259;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234095778 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6283;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234095813 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3798;AVGPOST=0.9980;RSQ=0.9966;ERATE=0.0004;THETA=0.0006;AC=828;AN=2184 GT:DS:GL:BD 0.37912089 0
1 234095855 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234095908 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.767;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234095972 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.968;LDAF=0.1261;AVGPOST=0.9904;RSQ=0.9703;ERATE=0.0003;THETA=0.0004;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 234096016 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2255;AVGPOST=0.9990;RSQ=0.9977;ERATE=0.0003;THETA=0.0003;AC=494;AN=2184 GT:DS:GL:BD 0.22619048 0
1 234096060 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234096160 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0018;AVGPOST=0.9997;RSQ=0.9231;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234096212 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0243;AVGPOST=0.9998;RSQ=0.9965;ERATE=0.0003;THETA=0.0001;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 234096255 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0100;AVGPOST=0.9992;RSQ=0.9667;ERATE=0.0003;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 234096256 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7533;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234096343 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8939;ERATE=0.0003;THETA=0.0018;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234096366 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5157;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234096430 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0508;AVGPOST=0.9997;RSQ=0.9974;ERATE=0.0003;THETA=0.0002;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 234096452 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7158;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234096460 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9647;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234096530 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234096576 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0673;AVGPOST=0.9999;RSQ=0.9990;ERATE=0.0003;THETA=0.0004;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 234096601 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0068;AVGPOST=0.9995;RSQ=0.9680;ERATE=0.0003;THETA=0.0008;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234096758 . A AC 18 PASS INDEL;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0027;AVGPOST=0.9981;RSQ=0.6914;ERATE=0.0006;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234096935 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4962;AVGPOST=0.9990;RSQ=0.9983;ERATE=0.0003;THETA=0.0004;AC=1082;AN=2184 GT:DS:GL:BD 0.49542123 0
1 234096993 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0676;AVGPOST=0.9989;RSQ=0.9921;ERATE=0.0004;THETA=0.0004;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 234097138 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4979;AVGPOST=0.9952;RSQ=0.9928;ERATE=0.0009;THETA=0.0003;AC=1083;AN=2184 GT:DS:GL:BD 0.49587911 0
1 234097264 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0250;AVGPOST=0.9983;RSQ=0.9705;ERATE=0.0004;THETA=0.0003;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 234097293 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2343;AVGPOST=0.9985;RSQ=0.9963;ERATE=0.0004;THETA=0.0006;AC=513;AN=2184 GT:DS:GL:BD 0.23489010 0
1 234097324 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2348;AVGPOST=0.9987;RSQ=0.9969;ERATE=0.0004;THETA=0.0003;AC=513;AN=2184 GT:DS:GL:BD 0.23489010 0
1 234097332 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.717;LDAF=0.0109;AVGPOST=0.9948;RSQ=0.8242;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234097427 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0045;AVGPOST=0.9992;RSQ=0.9195;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234097472 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0674;AVGPOST=0.9993;RSQ=0.9953;ERATE=0.0004;THETA=0.0002;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 234097482 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0087;AVGPOST=0.9993;RSQ=0.9705;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 234097494 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.544;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5376;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234097524 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8005;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234097542 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5417;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234097543 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0678;AVGPOST=0.9995;RSQ=0.9973;ERATE=0.0003;THETA=0.0005;AC=148;AN=2184 GT:DS:GL:BD 0.06776557 0
1 234097546 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9687;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234097576 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234097619 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0020;AVGPOST=0.9994;RSQ=0.8739;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234097866 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.808;LDAF=0.0070;AVGPOST=0.9971;RSQ=0.8400;ERATE=0.0004;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234097908 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.4421;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234097948 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234098010 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0041;AVGPOST=0.9992;RSQ=0.9235;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234098086 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.673;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5468;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234098109 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234098168 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1215;AVGPOST=0.9982;RSQ=0.9934;ERATE=0.0004;THETA=0.0002;AC=265;AN=2184 GT:DS:GL:BD 0.12133700 0
1 234098220 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.883;LDAF=0.0092;AVGPOST=0.9981;RSQ=0.9205;ERATE=0.0004;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 234098251 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0065;AVGPOST=0.9998;RSQ=0.9831;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234098310 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0193;AVGPOST=0.9985;RSQ=0.9663;ERATE=0.0003;THETA=0.0004;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 234098403 . C CT 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8151;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234098409 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6616;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234098412 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0668;AVGPOST=0.9998;RSQ=0.9984;ERATE=0.0003;THETA=0.0003;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 234098452 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2251;AVGPOST=0.9990;RSQ=0.9977;ERATE=0.0004;THETA=0.0002;AC=492;AN=2184 GT:DS:GL:BD 0.22527473 0
1 234098480 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234098507 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234098741 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234098762 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.4974;AVGPOST=0.9992;RSQ=0.9985;ERATE=0.0005;THETA=0.0002;AC=1084;AN=2184 GT:DS:GL:BD 0.49633700 0
1 234098764 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0063;AVGPOST=0.9993;RSQ=0.9523;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234098788 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0672;AVGPOST=0.9998;RSQ=0.9987;ERATE=0.0003;THETA=0.0002;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 234098841 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234098918 . GGTCACT G 164 PASS INDEL;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6460;ERATE=0.0006;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234098925 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234098961 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234099011 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7339;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234099110 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.966;LDAF=0.8048;AVGPOST=0.9653;RSQ=0.9108;ERATE=0.0035;THETA=0.0001;AC=1781;AN=2184 GT:DS:GL:BD 0.81547618 1
1 234099114 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0122;AVGPOST=0.9936;RSQ=0.7737;ERATE=0.0006;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234099269 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0332;AVGPOST=0.9990;RSQ=0.9875;ERATE=0.0003;THETA=0.0002;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 234099272 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0022;AVGPOST=0.9974;RSQ=0.4633;ERATE=0.0006;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234099273 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0210;AVGPOST=0.9968;RSQ=0.9288;ERATE=0.0006;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 234099282 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1194;AVGPOST=0.9957;RSQ=0.9834;ERATE=0.0006;THETA=0.0003;AC=262;AN=2184 GT:DS:GL:BD 0.11996337 0
1 234099303 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.490;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4944;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234099378 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8222;AVGPOST=0.9996;RSQ=0.9988;ERATE=0.0003;THETA=0.0003;AC=1795;AN=2184 GT:DS:GL:BD 0.82188642 1
1 234099383 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.896;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7823;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234099392 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4711;AVGPOST=0.9972;RSQ=0.9950;ERATE=0.0008;THETA=0.0002;AC=1030;AN=2184 GT:DS:GL:BD 0.47161171 0
1 234099473 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0047;AVGPOST=0.9996;RSQ=0.9628;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234099504 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9255;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234099600 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1446;AVGPOST=0.9995;RSQ=0.9983;ERATE=0.0003;THETA=0.0001;AC=316;AN=2184 GT:DS:GL:BD 0.14468865 0
1 234099645 rs80155809 G GT 10323 PASS INDEL;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.1199;AVGPOST=0.9971;RSQ=0.9888;ERATE=0.0006;THETA=0.0004;AC=260;AN=2184 GT:DS:GL:BD 0.11904762 0
1 234099819 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.986;LDAF=0.0672;AVGPOST=0.9997;RSQ=0.9981;ERATE=0.0003;THETA=0.0002;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 234099867 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.658;LDAF=0.0019;AVGPOST=0.9992;RSQ=0.8223;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234099915 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.751;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8455;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234099923 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8397;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234099975 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0166;AVGPOST=0.9997;RSQ=0.9923;ERATE=0.0004;THETA=0.0006;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 234099979 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0244;AVGPOST=0.9996;RSQ=0.9936;ERATE=0.0003;THETA=0.0002;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 234099988 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234100013 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0672;AVGPOST=0.9999;RSQ=0.9990;ERATE=0.0003;THETA=0.0002;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 234100031 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0672;AVGPOST=0.9997;RSQ=0.9981;ERATE=0.0003;THETA=0.0002;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 234100050 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1012;AVGPOST=0.9995;RSQ=0.9979;ERATE=0.0003;THETA=0.0002;AC=221;AN=2184 GT:DS:GL:BD 0.10119048 0
1 234100317 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2239;AVGPOST=0.9999;RSQ=0.9998;ERATE=0.0003;THETA=0.0001;AC=490;AN=2184 GT:DS:GL:BD 0.22435898 0
1 234100326 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234100359 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1444;AVGPOST=0.9991;RSQ=0.9970;ERATE=0.0003;THETA=0.0004;AC=316;AN=2184 GT:DS:GL:BD 0.14468865 0
1 234100363 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.813;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8840;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234100471 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0023;AVGPOST=0.9996;RSQ=0.9249;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234100513 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.9236;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234100539 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8221;AVGPOST=0.9997;RSQ=0.9991;ERATE=0.0003;THETA=0.0003;AC=1795;AN=2184 GT:DS:GL:BD 0.82188642 1
1 234100554 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8416;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234100603 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0086;AVGPOST=0.9997;RSQ=0.9848;ERATE=0.0003;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 234100695 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8696;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234100778 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.806;LDAF=0.0035;AVGPOST=0.9988;RSQ=0.8647;ERATE=0.0003;THETA=0.0001;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234100806 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1385;AVGPOST=0.9985;RSQ=0.9950;ERATE=0.0003;THETA=0.0003;AC=302;AN=2184 GT:DS:GL:BD 0.13827839 0
1 234100936 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6710;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234101022 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0024;AVGPOST=0.9984;RSQ=0.7693;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234101115 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6695;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234101396 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3767;AVGPOST=0.9964;RSQ=0.9939;ERATE=0.0008;THETA=0.0004;AC=819;AN=2184 GT:DS:GL:BD 0.37500000 0
1 234101417 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3782;AVGPOST=0.9971;RSQ=0.9952;ERATE=0.0007;THETA=0.0003;AC=822;AN=2184 GT:DS:GL:BD 0.37637362 0
1 234101529 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234101540 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3451;AVGPOST=0.9990;RSQ=0.9984;ERATE=0.0003;THETA=0.0002;AC=755;AN=2184 GT:DS:GL:BD 0.34569597 0
1 234101545 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0681;AVGPOST=0.9992;RSQ=0.9951;ERATE=0.0003;THETA=0.0004;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 234101568 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0041;AVGPOST=0.9991;RSQ=0.9003;ERATE=0.0007;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234101626 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1197;AVGPOST=0.9995;RSQ=0.9980;ERATE=0.0003;THETA=0.0004;AC=262;AN=2184 GT:DS:GL:BD 0.11996337 0
1 234101644 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0181;AVGPOST=0.9985;RSQ=0.9710;ERATE=0.0003;THETA=0.0002;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 234101767 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.522;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4380;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234101799 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5979;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234101848 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6441;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234101856 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234101891 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9058;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234101959 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0039;AVGPOST=0.9986;RSQ=0.8524;ERATE=0.0006;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234102017 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234102072 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2257;AVGPOST=0.9995;RSQ=0.9988;ERATE=0.0003;THETA=0.0004;AC=494;AN=2184 GT:DS:GL:BD 0.22619048 0
1 234102321 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.3799;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234102332 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2259;AVGPOST=0.9993;RSQ=0.9982;ERATE=0.0004;THETA=0.0003;AC=494;AN=2184 GT:DS:GL:BD 0.22619048 0
1 234102374 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5972;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234102379 . TA T 1071 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0121;AVGPOST=0.9965;RSQ=0.8789;ERATE=0.0006;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234102504 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2255;AVGPOST=0.9991;RSQ=0.9978;ERATE=0.0003;THETA=0.0003;AC=494;AN=2184 GT:DS:GL:BD 0.22619048 0
1 234102537 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8156;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234102606 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.803;LDAF=0.0038;AVGPOST=0.9987;RSQ=0.8392;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234102635 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2258;AVGPOST=0.9989;RSQ=0.9973;ERATE=0.0004;THETA=0.0001;AC=494;AN=2184 GT:DS:GL:BD 0.22619048 0
1 234102661 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8051;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234102764 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2265;AVGPOST=0.9980;RSQ=0.9956;ERATE=0.0004;THETA=0.0003;AC=494;AN=2184 GT:DS:GL:BD 0.22619048 0
1 234102969 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0680;AVGPOST=0.9988;RSQ=0.9919;ERATE=0.0004;THETA=0.0008;AC=148;AN=2184 GT:DS:GL:BD 0.06776557 0
1 234102991 rs112661542 G GC 1042 PASS INDEL;BAVGPOST=0.989;BRSQ=0.822;LDAF=0.0270;AVGPOST=0.9844;RSQ=0.7858;ERATE=0.0042;THETA=0.0003;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 234103273 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0023;AVGPOST=0.9975;RSQ=0.6068;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234103365 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0015;AVGPOST=0.9983;RSQ=0.5612;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234103462 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0091;AVGPOST=0.9992;RSQ=0.9661;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 234103691 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.975;LDAF=0.0601;AVGPOST=0.9984;RSQ=0.9895;ERATE=0.0003;THETA=0.0002;AC=131;AN=2184 GT:DS:GL:BD 0.05998169 0
1 234103849 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234103882 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0098;AVGPOST=0.9983;RSQ=0.9234;ERATE=0.0004;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234103910 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0074;AVGPOST=0.9998;RSQ=0.9861;ERATE=0.0003;THETA=0.0010;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234103931 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0067;AVGPOST=0.9994;RSQ=0.9628;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234104021 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.982;LDAF=0.0691;AVGPOST=0.9983;RSQ=0.9893;ERATE=0.0003;THETA=0.0003;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 234104074 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0686;AVGPOST=0.9991;RSQ=0.9940;ERATE=0.0004;THETA=0.0003;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 234104086 . AC A 236 PASS INDEL;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0027;AVGPOST=0.9984;RSQ=0.7287;ERATE=0.0007;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234104095 . C CT 993 PASS INDEL;BAVGPOST=0.993;BRSQ=0.798;LDAF=0.0173;AVGPOST=0.9918;RSQ=0.8175;ERATE=0.0013;THETA=0.0002;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 234104327 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.818;LDAF=0.0059;AVGPOST=0.9989;RSQ=0.9175;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234104383 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0106;AVGPOST=0.9994;RSQ=0.9742;ERATE=0.0003;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234104427 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=0.9997;RSQ=0.9805;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234104451 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7682;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234104546 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0686;AVGPOST=0.9996;RSQ=0.9975;ERATE=0.0003;THETA=0.0003;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 234104603 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.9934;AVGPOST=0.9987;RSQ=0.9328;ERATE=0.0003;THETA=0.0003;AC=2171;AN=2184 GT:DS:GL:BD 0.99404764 1
1 234104604 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5993;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234104807 . G GC 1227 PASS INDEL;BAVGPOST=0.977;BRSQ=0.635;LDAF=0.0488;AVGPOST=0.9599;RSQ=0.6743;ERATE=0.0058;THETA=0.0002;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 234104809 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.838;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8724;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234104810 . G GGC 105 PASS INDEL;BAVGPOST=0.983;BRSQ=0.519;LDAF=0.0138;AVGPOST=0.9880;RSQ=0.6675;ERATE=0.0011;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 234104811 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1395;AVGPOST=0.9975;RSQ=0.9913;ERATE=0.0004;THETA=0.0002;AC=304;AN=2184 GT:DS:GL:BD 0.13919415 0
1 234104834 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4859;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234104839 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.898;LDAF=0.0038;AVGPOST=0.9995;RSQ=0.9437;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234104928 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5768;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234105103 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0331;AVGPOST=0.9995;RSQ=0.9930;ERATE=0.0003;THETA=0.0004;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 234105180 . CCTT C 973 PASS INDEL;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0080;AVGPOST=0.9982;RSQ=0.8961;ERATE=0.0007;THETA=0.0010;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234105201 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0244;AVGPOST=0.9996;RSQ=0.9950;ERATE=0.0003;THETA=0.0002;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 234105211 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2927;AVGPOST=0.9990;RSQ=0.9981;ERATE=0.0003;THETA=0.0035;AC=641;AN=2184 GT:DS:GL:BD 0.29349816 0
1 234105460 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234105461 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9545;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234105499 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8061;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234105526 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6380;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234105610 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0101;AVGPOST=0.9994;RSQ=0.9737;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234105721 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.963;LDAF=0.0142;AVGPOST=0.9988;RSQ=0.9711;ERATE=0.0003;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 234105844 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7640;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234105853 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.967;LDAF=0.0141;AVGPOST=0.9992;RSQ=0.9787;ERATE=0.0003;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 234106192 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3516;AVGPOST=0.9987;RSQ=0.9975;ERATE=0.0003;THETA=0.0002;AC=770;AN=2184 GT:DS:GL:BD 0.35256410 0
1 234106193 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.4923;AVGPOST=0.9989;RSQ=0.9982;ERATE=0.0003;THETA=0.0027;AC=1073;AN=2184 GT:DS:GL:BD 0.49130037 0
1 234106213 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0061;AVGPOST=0.9986;RSQ=0.9306;ERATE=0.0004;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234106426 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0584;AVGPOST=0.9989;RSQ=0.9930;ERATE=0.0004;THETA=0.0016;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 234106481 . CAGAG C 93 PASS INDEL;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5462;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234106604 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0042;AVGPOST=0.9997;RSQ=0.9648;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234106692 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5715;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234106694 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234106725 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234106732 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2283;AVGPOST=0.9991;RSQ=0.9978;ERATE=0.0003;THETA=0.0002;AC=500;AN=2184 GT:DS:GL:BD 0.22893773 0
1 234106741 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6105;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234106882 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0022;AVGPOST=0.9996;RSQ=0.9362;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234106891 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5247;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234106897 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1209;AVGPOST=0.9993;RSQ=0.9975;ERATE=0.0003;THETA=0.0006;AC=265;AN=2184 GT:DS:GL:BD 0.12133700 0
1 234107038 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8343;ERATE=0.0010;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234107063 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8894;ERATE=0.0004;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234107116 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234107183 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3513;AVGPOST=0.9989;RSQ=0.9980;ERATE=0.0004;THETA=0.0005;AC=769;AN=2184 GT:DS:GL:BD 0.35210621 0
1 234107188 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.761;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6528;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234107201 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0144;AVGPOST=0.9987;RSQ=0.9583;ERATE=0.0004;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 234107233 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0205;AVGPOST=0.9965;RSQ=0.9404;ERATE=0.0003;THETA=0.0002;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 234107274 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.705;LDAF=0.0102;AVGPOST=0.9937;RSQ=0.7338;ERATE=0.0006;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 234107275 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.4934;AVGPOST=0.9941;RSQ=0.9909;ERATE=0.0008;THETA=0.0002;AC=1082;AN=2184 GT:DS:GL:BD 0.49542123 0
1 234107314 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3517;AVGPOST=0.9979;RSQ=0.9963;ERATE=0.0004;THETA=0.0003;AC=769;AN=2184 GT:DS:GL:BD 0.35210621 0
1 234107322 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0061;AVGPOST=0.9988;RSQ=0.9256;ERATE=0.0003;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234107326 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0039;AVGPOST=0.9996;RSQ=0.9588;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234107328 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0021;AVGPOST=0.9975;RSQ=0.5269;ERATE=0.0005;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234107406 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.723;LDAF=0.0029;AVGPOST=0.9965;RSQ=0.5529;ERATE=0.0005;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234107508 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.2275;AVGPOST=0.9902;RSQ=0.9805;ERATE=0.0028;THETA=0.0003;AC=491;AN=2184 GT:DS:GL:BD 0.22481684 0
1 234107521 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.894;LDAF=0.0605;AVGPOST=0.9827;RSQ=0.8942;ERATE=0.0080;THETA=0.0002;AC=122;AN=2184 GT:DS:GL:BD 0.05586081 0
1 234107531 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.956;LDAF=0.0228;AVGPOST=0.9991;RSQ=0.9818;ERATE=0.0004;THETA=0.0005;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 234107567 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.989;LDAF=0.5043;AVGPOST=0.9885;RSQ=0.9846;ERATE=0.0053;THETA=0.0002;AC=1099;AN=2184 GT:DS:GL:BD 0.50320512 1
1 234107662 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0021;AVGPOST=0.9983;RSQ=0.6675;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234107677 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.831;LDAF=0.0054;AVGPOST=0.9984;RSQ=0.8738;ERATE=0.0004;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234107734 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0104;AVGPOST=0.9989;RSQ=0.9540;ERATE=0.0004;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234107748 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.676;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4641;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234107849 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7640;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234107863 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2269;AVGPOST=0.9991;RSQ=0.9980;ERATE=0.0003;THETA=0.0003;AC=496;AN=2184 GT:DS:GL:BD 0.22710623 0
1 234107868 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.909;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9376;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234107883 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4985;AVGPOST=0.9990;RSQ=0.9985;ERATE=0.0005;THETA=0.0002;AC=1091;AN=2184 GT:DS:GL:BD 0.49954212 0
1 234108006 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234108007 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9308;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234108019 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1213;AVGPOST=0.9996;RSQ=0.9985;ERATE=0.0003;THETA=0.0002;AC=265;AN=2184 GT:DS:GL:BD 0.12133700 0
1 234108065 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9879;AVGPOST=0.9996;RSQ=0.9867;ERATE=0.0003;THETA=0.0003;AC=2158;AN=2184 GT:DS:GL:BD 0.98809522 1
1 234108069 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0001;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234108081 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0665;AVGPOST=0.9989;RSQ=0.9942;ERATE=0.0003;THETA=0.0004;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 234108220 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0669;AVGPOST=0.9996;RSQ=0.9971;ERATE=0.0003;THETA=0.0003;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 234108368 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8148;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234108396 rs60128546 T TATC 14614 PASS INDEL;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.0581;AVGPOST=0.9976;RSQ=0.9848;ERATE=0.0006;THETA=0.0008;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 234108450 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0014;AVGPOST=0.9996;RSQ=0.8742;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234108451 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5305;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234108452 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0097;AVGPOST=0.9979;RSQ=0.9191;ERATE=0.0003;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234108453 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.887;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9843;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234108507 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0684;AVGPOST=0.9994;RSQ=0.9963;ERATE=0.0003;THETA=0.0002;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 234108633 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.4966;AVGPOST=0.9976;RSQ=0.9965;ERATE=0.0006;THETA=0.0002;AC=1087;AN=2184 GT:DS:GL:BD 0.49771062 0
1 234108665 . AC A 69 PASS INDEL;BAVGPOST=1.000;BRSQ=0.667;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5709;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234108985 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9722;ERATE=0.0003;THETA=0.0020;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234109124 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0104;AVGPOST=0.9990;RSQ=0.9606;ERATE=0.0003;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234109464 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2606;AVGPOST=0.9995;RSQ=0.9988;ERATE=0.0003;THETA=0.0007;AC=570;AN=2184 GT:DS:GL:BD 0.26098901 0
1 234109661 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0574;AVGPOST=0.9993;RSQ=0.9946;ERATE=0.0003;THETA=0.0002;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 234109847 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.740;LDAF=0.0015;AVGPOST=0.9990;RSQ=0.7371;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234109920 rs72087661 C CT 1478 PASS INDEL;BAVGPOST=0.522;BRSQ=0.135;LDAF=0.5731;AVGPOST=0.6774;RSQ=0.4465;ERATE=0.0229;THETA=0.0020;AC=1246;AN=2184 GT:DS:GL:BD 0.57051283 1
1 234110114 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.927;LDAF=0.0143;AVGPOST=0.9995;RSQ=0.9832;ERATE=0.0003;THETA=0.0002;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 234110126 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9187;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234110223 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0424;AVGPOST=0.9990;RSQ=0.9909;ERATE=0.0004;THETA=0.0003;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 234110307 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234110472 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234110505 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0029;AVGPOST=0.9992;RSQ=0.8819;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234110518 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6906;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234110532 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0156;AVGPOST=0.9989;RSQ=0.9735;ERATE=0.0003;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 234110575 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0074;AVGPOST=0.9999;RSQ=0.9923;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234110635 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0195;AVGPOST=0.9991;RSQ=0.9837;ERATE=0.0003;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 234110769 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4896;AVGPOST=0.9983;RSQ=0.9976;ERATE=0.0004;THETA=0.0003;AC=1070;AN=2184 GT:DS:GL:BD 0.48992673 0
1 234110780 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234110781 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7176;AVGPOST=0.9982;RSQ=0.9966;ERATE=0.0004;THETA=0.0002;AC=1570;AN=2184 GT:DS:GL:BD 0.71886444 1
1 234110786 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1019;AVGPOST=0.9996;RSQ=0.9980;ERATE=0.0003;THETA=0.0020;AC=223;AN=2184 GT:DS:GL:BD 0.10210623 0
1 234110847 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2605;AVGPOST=0.9998;RSQ=0.9996;ERATE=0.0003;THETA=0.0008;AC=570;AN=2184 GT:DS:GL:BD 0.26098901 0
1 234110872 rs58020624 T TCAGGC 20113 PASS INDEL;BAVGPOST=0.990;BRSQ=0.950;LDAF=0.1013;AVGPOST=0.9969;RSQ=0.9876;ERATE=0.0004;THETA=0.0004;AC=223;AN=2184 GT:DS:GL:BD 0.10210623 0
1 234110878 . C CA 285 PASS INDEL;BAVGPOST=0.965;BRSQ=0.557;LDAF=0.0456;AVGPOST=0.9655;RSQ=0.7424;ERATE=0.0005;THETA=0.0003;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 234110881 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0949;AVGPOST=0.9993;RSQ=0.9965;ERATE=0.0003;THETA=0.0003;AC=207;AN=2184 GT:DS:GL:BD 0.09478022 0
1 234111073 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.0044;AVGPOST=0.9984;RSQ=0.8651;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234111176 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5908;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234111212 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5827;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234111228 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7196;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234111312 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0031;AVGPOST=0.9983;RSQ=0.7932;ERATE=0.0005;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234111316 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6337;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234111381 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.550;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6309;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234111400 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0084;AVGPOST=0.9996;RSQ=0.9798;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 234111442 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.2098;AVGPOST=0.9974;RSQ=0.9942;ERATE=0.0004;THETA=0.0008;AC=460;AN=2184 GT:DS:GL:BD 0.21062271 0
1 234111465 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4169;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234111599 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0572;AVGPOST=0.9997;RSQ=0.9975;ERATE=0.0003;THETA=0.0023;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 234111604 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234111610 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0575;AVGPOST=0.9993;RSQ=0.9949;ERATE=0.0003;THETA=0.0003;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 234111640 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.941;LDAF=0.0207;AVGPOST=0.9963;RSQ=0.9297;ERATE=0.0003;THETA=0.0004;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 234111641 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0297;AVGPOST=0.9989;RSQ=0.9858;ERATE=0.0003;THETA=0.0003;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 234111676 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.6120;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234111739 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0196;AVGPOST=0.9997;RSQ=0.9930;ERATE=0.0003;THETA=0.0003;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 234111859 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.5540;AVGPOST=0.9903;RSQ=0.9869;ERATE=0.0036;THETA=0.0029;AC=1214;AN=2184 GT:DS:GL:BD 0.55586082 1
1 234111948 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9601;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234111997 . G GA 48 PASS INDEL;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4856;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234112214 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.626;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7248;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234112246 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0115;AVGPOST=0.9999;RSQ=0.9964;ERATE=0.0003;THETA=0.0058;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 234112360 . A AT 491 PASS INDEL;BAVGPOST=0.950;BRSQ=0.541;LDAF=0.0842;AVGPOST=0.9114;RSQ=0.5167;ERATE=0.0347;THETA=0.0002;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 234112381 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.699;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5289;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234112402 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.940;LDAF=0.3223;AVGPOST=0.9839;RSQ=0.9732;ERATE=0.0017;THETA=0.0006;AC=714;AN=2184 GT:DS:GL:BD 0.32692307 0
1 234112442 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.965;BRSQ=0.941;LDAF=0.5309;AVGPOST=0.9442;RSQ=0.9250;ERATE=0.0106;THETA=0.0004;AC=1180;AN=2184 GT:DS:GL:BD 0.54029304 1
1 234112511 . CA C 242 PASS INDEL;BAVGPOST=0.999;BRSQ=0.742;LDAF=0.0031;AVGPOST=0.9978;RSQ=0.7223;ERATE=0.0006;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234112544 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.2646;AVGPOST=0.9936;RSQ=0.9890;ERATE=0.0006;THETA=0.0003;AC=575;AN=2184 GT:DS:GL:BD 0.26327839 0
1 234112555 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1769;AVGPOST=0.9979;RSQ=0.9940;ERATE=0.0004;THETA=0.0005;AC=386;AN=2184 GT:DS:GL:BD 0.17673993 0
1 234112634 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0368;AVGPOST=0.9988;RSQ=0.9872;ERATE=0.0003;THETA=0.0003;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 234112652 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0116;AVGPOST=0.9997;RSQ=0.9876;ERATE=0.0003;THETA=0.0001;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 234112657 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0251;AVGPOST=0.9996;RSQ=0.9936;ERATE=0.0003;THETA=0.0002;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 234112713 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234112790 . GT G 86 PASS INDEL;BAVGPOST=0.999;BRSQ=0.835;LDAF=0.0018;AVGPOST=0.9981;RSQ=0.5750;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234113077 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0500;AVGPOST=0.9994;RSQ=0.9949;ERATE=0.0003;THETA=0.0003;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 234113095 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.844;LDAF=0.0053;AVGPOST=0.9974;RSQ=0.7926;ERATE=0.0004;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234113205 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0011;AVGPOST=0.9984;RSQ=0.4628;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234113242 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234113275 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0084;AVGPOST=0.9995;RSQ=0.9740;ERATE=0.0003;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 234113336 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8820;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234113346 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0025;AVGPOST=0.9994;RSQ=0.8865;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234113362 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0003;AVGPOST=0.9997;RSQ=0.6564;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234113383 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234113416 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0564;AVGPOST=0.9995;RSQ=0.9957;ERATE=0.0003;THETA=0.0003;AC=123;AN=2184 GT:DS:GL:BD 0.05631868 0
1 234113530 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5561;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234113607 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0066;AVGPOST=0.9996;RSQ=0.9733;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234113671 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234113712 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8749;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234113765 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0056;AVGPOST=0.9989;RSQ=0.9117;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234113772 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6105;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234113775 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0735;AVGPOST=0.9990;RSQ=0.9943;ERATE=0.0004;THETA=0.0005;AC=161;AN=2184 GT:DS:GL:BD 0.07371795 0
1 234113996 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.789;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7403;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234114076 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234114090 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234114104 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9643;ERATE=0.0003;THETA=0.0001;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234114220 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.641;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234114371 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0085;AVGPOST=0.9990;RSQ=0.9497;ERATE=0.0007;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 234114503 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0122;AVGPOST=0.9986;RSQ=0.9582;ERATE=0.0004;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 234114525 . CA C 7371 PASS INDEL;BAVGPOST=0.981;BRSQ=0.960;LDAF=0.2640;AVGPOST=0.9913;RSQ=0.9834;ERATE=0.0010;THETA=0.0004;AC=573;AN=2184 GT:DS:GL:BD 0.26236263 0
1 234114547 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.667;LDAF=0.0045;AVGPOST=0.9967;RSQ=0.6945;ERATE=0.0006;THETA=0.0013;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234114633 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2627;AVGPOST=0.9969;RSQ=0.9931;ERATE=0.0005;THETA=0.0002;AC=574;AN=2184 GT:DS:GL:BD 0.26282051 0
1 234114731 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0513;AVGPOST=0.9993;RSQ=0.9945;ERATE=0.0003;THETA=0.0004;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 234114826 . AAAAAAG A 790 PASS INDEL;BAVGPOST=0.998;BRSQ=0.845;LDAF=0.0087;AVGPOST=0.9977;RSQ=0.8862;ERATE=0.0006;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 234114897 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7059;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234115011 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5979;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234115099 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0667;AVGPOST=0.9996;RSQ=0.9974;ERATE=0.0004;THETA=0.0002;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 234115116 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.1021;AVGPOST=0.9993;RSQ=0.9967;ERATE=0.0003;THETA=0.0002;AC=223;AN=2184 GT:DS:GL:BD 0.10210623 0
1 234115248 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234115297 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234115315 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.677;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5631;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234115326 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0084;AVGPOST=0.9997;RSQ=0.9816;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 234115331 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0159;AVGPOST=0.9990;RSQ=0.9789;ERATE=0.0003;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 234115384 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0074;AVGPOST=0.9984;RSQ=0.9128;ERATE=0.0003;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234115450 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5665;AVGPOST=0.9977;RSQ=0.9968;ERATE=0.0004;THETA=0.0004;AC=1240;AN=2184 GT:DS:GL:BD 0.56776559 1
1 234115454 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0373;AVGPOST=0.9989;RSQ=0.9903;ERATE=0.0004;THETA=0.0005;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 234115519 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7441;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234115547 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.955;LDAF=0.0190;AVGPOST=0.9979;RSQ=0.9607;ERATE=0.0004;THETA=0.0003;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 234115597 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234115622 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9046;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234115781 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8421;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234115894 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0109;AVGPOST=0.9990;RSQ=0.9669;ERATE=0.0003;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234115914 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1760;AVGPOST=0.9992;RSQ=0.9976;ERATE=0.0004;THETA=0.0006;AC=385;AN=2184 GT:DS:GL:BD 0.17628205 0
1 234116039 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0576;AVGPOST=0.9998;RSQ=0.9982;ERATE=0.0003;THETA=0.0002;AC=126;AN=2184 GT:DS:GL:BD 0.05769231 0
1 234116084 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234116123 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234116169 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.6681;ERATE=0.0003;THETA=0.0032;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234116183 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5591;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234116342 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.864;LDAF=0.0158;AVGPOST=0.9956;RSQ=0.8953;ERATE=0.0004;THETA=0.0008;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 234116346 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0029;AVGPOST=0.9959;RSQ=0.4929;ERATE=0.0010;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234116364 . CT C 543 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0045;AVGPOST=0.9992;RSQ=0.9125;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234116408 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6390;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234116462 . AATG A 31 PASS INDEL;BAVGPOST=0.998;BRSQ=0.644;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8848;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234116511 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0083;AVGPOST=0.9998;RSQ=0.9868;ERATE=0.0004;THETA=0.0008;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 234116543 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8923;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234116544 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6798;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234116584 . TCA T 24 PASS INDEL;BAVGPOST=1.000;BRSQ=0.650;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5790;ERATE=0.0003;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234116636 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234116698 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.987;LDAF=0.3751;AVGPOST=0.9944;RSQ=0.9913;ERATE=0.0004;THETA=0.0003;AC=823;AN=2184 GT:DS:GL:BD 0.37683150 0
1 234116713 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.989;LDAF=0.3750;AVGPOST=0.9947;RSQ=0.9918;ERATE=0.0003;THETA=0.0069;AC=823;AN=2184 GT:DS:GL:BD 0.37683150 0
1 234117029 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234117072 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0041;AVGPOST=0.9989;RSQ=0.8846;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234117148 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0084;AVGPOST=0.9997;RSQ=0.9818;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 234117166 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.932;LDAF=0.0131;AVGPOST=0.9981;RSQ=0.9479;ERATE=0.0003;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 234117230 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.2271;AVGPOST=0.9953;RSQ=0.9899;ERATE=0.0006;THETA=0.0027;AC=496;AN=2184 GT:DS:GL:BD 0.22710623 0
1 234117271 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0111;AVGPOST=0.9987;RSQ=0.9512;ERATE=0.0003;THETA=0.0022;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234117384 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0022;AVGPOST=0.9990;RSQ=0.8162;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234117475 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0072;AVGPOST=0.9995;RSQ=0.9724;ERATE=0.0003;THETA=0.0009;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234117502 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0109;AVGPOST=0.9993;RSQ=0.9711;ERATE=0.0003;THETA=0.0008;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234117520 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1403;AVGPOST=0.9983;RSQ=0.9954;ERATE=0.0003;THETA=0.0080;AC=305;AN=2184 GT:DS:GL:BD 0.13965201 0
1 234117675 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.948;LDAF=0.0179;AVGPOST=0.9964;RSQ=0.9344;ERATE=0.0003;THETA=0.0005;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 234117712 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.718;LDAF=0.0027;AVGPOST=0.9963;RSQ=0.5407;ERATE=0.0005;THETA=0.0025;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234117940 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234118046 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.966;LDAF=0.0293;AVGPOST=0.9975;RSQ=0.9708;ERATE=0.0003;THETA=0.0005;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 234118223 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.956;BRSQ=0.931;LDAF=0.5412;AVGPOST=0.9331;RSQ=0.9077;ERATE=0.0137;THETA=0.0006;AC=1207;AN=2184 GT:DS:GL:BD 0.55265570 1
1 234118270 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.961;LDAF=0.0565;AVGPOST=0.9969;RSQ=0.9773;ERATE=0.0003;THETA=0.0079;AC=124;AN=2184 GT:DS:GL:BD 0.05677656 0
1 234118334 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.446;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5655;ERATE=0.0005;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234118446 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234118525 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0589;AVGPOST=0.9979;RSQ=0.9874;ERATE=0.0003;THETA=0.0013;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 234118540 . GT G 335 PASS INDEL;BAVGPOST=0.998;BRSQ=0.751;LDAF=0.0055;AVGPOST=0.9979;RSQ=0.8399;ERATE=0.0005;THETA=0.0011;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234118566 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0041;AVGPOST=0.9999;RSQ=0.9894;ERATE=0.0003;THETA=0.0021;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234118604 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0058;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234118610 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9459;ERATE=0.0003;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234118670 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0005;AVGPOST=0.9992;RSQ=0.3294;ERATE=0.0003;THETA=0.0017;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 234118685 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6204;ERATE=0.0003;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234118737 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5672;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234118747 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8815;ERATE=0.0003;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234118794 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8786;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234118824 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8757;ERATE=0.0004;THETA=0.0018;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234118863 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1422;AVGPOST=0.9982;RSQ=0.9946;ERATE=0.0004;THETA=0.0023;AC=309;AN=2184 GT:DS:GL:BD 0.14148352 0
1 234118917 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1444;AVGPOST=0.9978;RSQ=0.9934;ERATE=0.0004;THETA=0.0013;AC=313;AN=2184 GT:DS:GL:BD 0.14331502 0
1 234118930 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.979;LDAF=0.0506;AVGPOST=0.9970;RSQ=0.9781;ERATE=0.0004;THETA=0.0068;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 234118932 . CTCTA C 7857 PASS INDEL;BAVGPOST=0.992;BRSQ=0.963;LDAF=0.0711;AVGPOST=0.9899;RSQ=0.9452;ERATE=0.0004;THETA=0.0098;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 234119001 . TA T 32 PASS INDEL;BAVGPOST=0.996;BRSQ=0.309;LDAF=0.0021;AVGPOST=0.9968;RSQ=0.3891;ERATE=0.0009;THETA=0.0133;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234119004 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1426;AVGPOST=0.9948;RSQ=0.9828;ERATE=0.0004;THETA=0.0017;AC=311;AN=2184 GT:DS:GL:BD 0.14239927 0
1 234119074 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9187;ERATE=0.0003;THETA=0.0098;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234119124 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0130;AVGPOST=0.9977;RSQ=0.9420;ERATE=0.0004;THETA=0.0067;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 234119218 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.711;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5824;ERATE=0.0004;THETA=0.0071;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234119327 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7474;ERATE=0.0003;THETA=0.0025;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234119372 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.959;LDAF=0.0693;AVGPOST=0.9938;RSQ=0.9624;ERATE=0.0005;THETA=0.0005;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 234119376 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6781;ERATE=0.0005;THETA=0.0073;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234119470 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6428;ERATE=0.0003;THETA=0.0058;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234119476 rs113440189 CAA C 2971 PASS INDEL;BAVGPOST=0.993;BRSQ=0.936;LDAF=0.0334;AVGPOST=0.9953;RSQ=0.9453;ERATE=0.0005;THETA=0.0088;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 234119495 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.981;LDAF=0.1848;AVGPOST=0.9895;RSQ=0.9768;ERATE=0.0006;THETA=0.0149;AC=401;AN=2184 GT:DS:GL:BD 0.18360806 0
1 234119498 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.885;LDAF=0.0097;AVGPOST=0.9979;RSQ=0.9171;ERATE=0.0006;THETA=0.0069;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 234119583 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.961;LDAF=0.0288;AVGPOST=0.9972;RSQ=0.9563;ERATE=0.0003;THETA=0.0031;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 234119647 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0065;AVGPOST=0.9998;RSQ=0.9841;ERATE=0.0003;THETA=0.0107;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234119695 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.744;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5595;ERATE=0.0005;THETA=0.0147;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234119701 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234119767 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.964;LDAF=0.0556;AVGPOST=0.9953;RSQ=0.9704;ERATE=0.0005;THETA=0.0132;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 234119771 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6464;ERATE=0.0003;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234119810 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.986;LDAF=0.2495;AVGPOST=0.9927;RSQ=0.9863;ERATE=0.0005;THETA=0.0109;AC=544;AN=2184 GT:DS:GL:BD 0.24908425 0
1 234119845 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0026;AVGPOST=0.9965;RSQ=0.4753;ERATE=0.0006;THETA=0.0038;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234119852 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0018;AVGPOST=0.9979;RSQ=0.5319;ERATE=0.0009;THETA=0.0072;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234119979 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0713;AVGPOST=0.9982;RSQ=0.9901;ERATE=0.0003;THETA=0.0009;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 234119997 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0156;AVGPOST=1.0000;RSQ=0.9986;ERATE=0.0003;THETA=0.0007;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 234120074 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6151;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234120124 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.2994;AVGPOST=0.9957;RSQ=0.9928;ERATE=0.0007;THETA=0.0035;AC=652;AN=2184 GT:DS:GL:BD 0.29853481 0
1 234120236 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0177;AVGPOST=0.9980;RSQ=0.9526;ERATE=0.0003;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 234120266 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3451;AVGPOST=0.9988;RSQ=0.9977;ERATE=0.0004;THETA=0.0004;AC=754;AN=2184 GT:DS:GL:BD 0.34523809 0
1 234120412 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.6830;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234120438 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3465;AVGPOST=0.9989;RSQ=0.9979;ERATE=0.0003;THETA=0.0005;AC=757;AN=2184 GT:DS:GL:BD 0.34661171 0
1 234120480 . TG T 2994 PASS INDEL;BAVGPOST=0.991;BRSQ=0.871;LDAF=0.0226;AVGPOST=0.9957;RSQ=0.9218;ERATE=0.0005;THETA=0.0004;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 234120482 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7452;ERATE=0.0005;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234120511 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7081;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234120532 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6100;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234120633 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234120653 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7172;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234120670 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234120728 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0030;AVGPOST=0.9978;RSQ=0.6753;ERATE=0.0006;THETA=0.0014;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234120758 . G GT 901 PASS INDEL;BAVGPOST=0.956;BRSQ=0.815;LDAF=0.1161;AVGPOST=0.9540;RSQ=0.8486;ERATE=0.0004;THETA=0.0002;AC=255;AN=2184 GT:DS:GL:BD 0.11675824 0
1 234120760 rs59133633 T TG 21157 PASS INDEL;BAVGPOST=0.984;BRSQ=0.970;LDAF=0.3014;AVGPOST=0.9937;RSQ=0.9896;ERATE=0.0008;THETA=0.0006;AC=658;AN=2184 GT:DS:GL:BD 0.30128205 0
1 234120762 rs34725210 G GA 17771 PASS INDEL;BAVGPOST=0.959;BRSQ=0.894;LDAF=0.2242;AVGPOST=0.9535;RSQ=0.9107;ERATE=0.0005;THETA=0.0004;AC=491;AN=2184 GT:DS:GL:BD 0.22481684 0
1 234120767 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9988;RSQ=0.9104;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234120939 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234121014 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1819;AVGPOST=0.9984;RSQ=0.9955;ERATE=0.0004;THETA=0.0002;AC=397;AN=2184 GT:DS:GL:BD 0.18177655 0
1 234121046 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0431;AVGPOST=0.9998;RSQ=0.9977;ERATE=0.0003;THETA=0.0002;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 234121091 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0356;AVGPOST=0.9997;RSQ=0.9964;ERATE=0.0003;THETA=0.0003;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 234121106 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7951;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234121132 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234121177 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7153;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234121190 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8261;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234121343 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.664;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5958;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234121473 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234121506 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7618;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234121581 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7437;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234121614 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0038;AVGPOST=0.9995;RSQ=0.9392;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234121672 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0118;AVGPOST=0.9981;RSQ=0.9352;ERATE=0.0003;THETA=0.0007;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 234121703 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234121724 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8018;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234121738 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234121873 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2678;AVGPOST=0.9964;RSQ=0.9939;ERATE=0.0007;THETA=0.0002;AC=584;AN=2184 GT:DS:GL:BD 0.26739928 0
1 234121949 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0051;AVGPOST=0.9980;RSQ=0.8196;ERATE=0.0005;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234122124 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.3534;AVGPOST=0.9980;RSQ=0.9963;ERATE=0.0006;THETA=0.0002;AC=772;AN=2184 GT:DS:GL:BD 0.35347986 0
1 234122126 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0041;AVGPOST=0.9991;RSQ=0.8975;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234122340 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1114;AVGPOST=0.9989;RSQ=0.9957;ERATE=0.0004;THETA=0.0005;AC=242;AN=2184 GT:DS:GL:BD 0.11080586 0
1 234122399 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.6151;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234122473 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9812;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234122588 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9558;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234122852 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6037;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234122878 rs72025514 C CA 9708 PASS INDEL;BAVGPOST=0.978;BRSQ=0.933;LDAF=0.1713;AVGPOST=0.9814;RSQ=0.9545;ERATE=0.0015;THETA=0.0003;AC=376;AN=2184 GT:DS:GL:BD 0.17216118 0
1 234122943 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3489;AVGPOST=0.9970;RSQ=0.9949;ERATE=0.0008;THETA=0.0003;AC=763;AN=2184 GT:DS:GL:BD 0.34935898 0
1 234123067 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.7342;AVGPOST=0.9987;RSQ=0.9976;ERATE=0.0004;THETA=0.0004;AC=1602;AN=2184 GT:DS:GL:BD 0.73351645 1
1 234123123 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234123274 . C CT 154 PASS INDEL;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234123412 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0023;AVGPOST=0.9998;RSQ=0.9626;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234123428 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.812;LDAF=0.0068;AVGPOST=0.9990;RSQ=0.9413;ERATE=0.0004;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234123471 . TTC T 125 PASS INDEL;BAVGPOST=0.994;BRSQ=0.669;LDAF=0.0158;AVGPOST=0.9826;RSQ=0.5645;ERATE=0.0042;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234123512 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6678;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234123535 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8123;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234123603 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0211;AVGPOST=0.9990;RSQ=0.9825;ERATE=0.0003;THETA=0.0004;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 234123654 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5640;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234123786 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6432;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234123881 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0260;AVGPOST=0.9991;RSQ=0.9869;ERATE=0.0003;THETA=0.0027;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 234123901 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0029;AVGPOST=0.9984;RSQ=0.7899;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234123921 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9999;RSQ=0.9910;ERATE=0.0003;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234123942 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234123957 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9814;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234123977 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0428;AVGPOST=0.9995;RSQ=0.9947;ERATE=0.0003;THETA=0.0005;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 234124231 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2351;AVGPOST=0.9994;RSQ=0.9987;ERATE=0.0003;THETA=0.0005;AC=511;AN=2184 GT:DS:GL:BD 0.23397435 0
1 234124249 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0339;AVGPOST=0.9998;RSQ=0.9974;ERATE=0.0003;THETA=0.0002;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 234124329 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234124407 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234124513 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0499;AVGPOST=0.9995;RSQ=0.9955;ERATE=0.0003;THETA=0.0002;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 234124645 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8939;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234124725 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6733;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234124758 . A AT 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.705;LDAF=0.0046;AVGPOST=0.9958;RSQ=0.6731;ERATE=0.0004;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234124793 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.7339;AVGPOST=0.9975;RSQ=0.9956;ERATE=0.0004;THETA=0.0004;AC=1602;AN=2184 GT:DS:GL:BD 0.73351645 1
1 234124828 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6230;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234124891 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0109;AVGPOST=0.9989;RSQ=0.9599;ERATE=0.0003;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234124925 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.657;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5281;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234124939 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0061;AVGPOST=0.9992;RSQ=0.9464;ERATE=0.0003;THETA=0.0010;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234124946 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0062;AVGPOST=0.9983;RSQ=0.8941;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234125002 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.989;LDAF=0.3072;AVGPOST=0.9964;RSQ=0.9934;ERATE=0.0010;THETA=0.0002;AC=673;AN=2184 GT:DS:GL:BD 0.30815017 0
1 234125058 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0143;AVGPOST=0.9980;RSQ=0.9395;ERATE=0.0003;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 234125074 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0031;AVGPOST=0.9972;RSQ=0.6079;ERATE=0.0009;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234125097 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9543;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234125188 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.3090;AVGPOST=0.9968;RSQ=0.9949;ERATE=0.0006;THETA=0.0003;AC=673;AN=2184 GT:DS:GL:BD 0.30815017 0
1 234125236 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.853;LDAF=0.0088;AVGPOST=0.9957;RSQ=0.8079;ERATE=0.0004;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234125329 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.747;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234125397 . G GA 925 PASS INDEL;BAVGPOST=0.989;BRSQ=0.635;LDAF=0.0185;AVGPOST=0.9814;RSQ=0.6157;ERATE=0.0020;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 234125411 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5892;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234125641 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9244;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234125650 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.3532;AVGPOST=0.9903;RSQ=0.9841;ERATE=0.0015;THETA=0.0004;AC=772;AN=2184 GT:DS:GL:BD 0.35347986 0
1 234125703 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4823;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234125932 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.807;LDAF=0.0045;AVGPOST=0.9987;RSQ=0.8713;ERATE=0.0004;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234125948 . T TA 7 PASS INDEL;BAVGPOST=0.999;BRSQ=0.581;LDAF=0.0017;AVGPOST=0.9981;RSQ=0.4876;ERATE=0.0005;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234126108 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5752;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234126125 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9009;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234126159 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3091;AVGPOST=0.9994;RSQ=0.9988;ERATE=0.0004;THETA=0.0002;AC=675;AN=2184 GT:DS:GL:BD 0.30906594 0
1 234126176 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0029;AVGPOST=0.9982;RSQ=0.7493;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234126203 . CA C 7496 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0581;AVGPOST=0.9974;RSQ=0.9854;ERATE=0.0003;THETA=0.0002;AC=126;AN=2184 GT:DS:GL:BD 0.05769231 0
1 234126225 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7896;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234126263 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6440;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234126350 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5559;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234126360 rs56994064 T TCTCGCCATA 32823 PASS INDEL;BAVGPOST=0.982;BRSQ=0.947;LDAF=0.1545;AVGPOST=0.9862;RSQ=0.9636;ERATE=0.0029;THETA=0.0004;AC=338;AN=2184 GT:DS:GL:BD 0.15476191 0
1 234126411 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.3088;AVGPOST=0.9993;RSQ=0.9986;ERATE=0.0005;THETA=0.0002;AC=675;AN=2184 GT:DS:GL:BD 0.30906594 0
1 234126454 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234126516 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4442;AVGPOST=0.9988;RSQ=0.9980;ERATE=0.0003;THETA=0.0004;AC=971;AN=2184 GT:DS:GL:BD 0.44459707 0
1 234126676 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3498;AVGPOST=0.9989;RSQ=0.9979;ERATE=0.0004;THETA=0.0002;AC=764;AN=2184 GT:DS:GL:BD 0.34981686 0
1 234126736 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3494;AVGPOST=0.9993;RSQ=0.9986;ERATE=0.0004;THETA=0.0005;AC=764;AN=2184 GT:DS:GL:BD 0.34981686 0
1 234126816 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5566;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234126830 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7109;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234126855 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6492;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234126890 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0061;AVGPOST=0.9981;RSQ=0.8908;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234126919 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3903;AVGPOST=0.9992;RSQ=0.9984;ERATE=0.0005;THETA=0.0003;AC=853;AN=2184 GT:DS:GL:BD 0.39056778 0
1 234126990 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6196;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234127001 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2295;AVGPOST=0.9983;RSQ=0.9966;ERATE=0.0004;THETA=0.0002;AC=500;AN=2184 GT:DS:GL:BD 0.22893773 0
1 234127098 . GC G 97 PASS INDEL;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7775;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234127102 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.971;LDAF=0.0450;AVGPOST=0.9974;RSQ=0.9789;ERATE=0.0004;THETA=0.0002;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 234127156 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3498;AVGPOST=0.9995;RSQ=0.9991;ERATE=0.0003;THETA=0.0004;AC=764;AN=2184 GT:DS:GL:BD 0.34981686 0
1 234127163 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0496;AVGPOST=0.9994;RSQ=0.9945;ERATE=0.0003;THETA=0.0003;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 234127230 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3498;AVGPOST=0.9984;RSQ=0.9972;ERATE=0.0006;THETA=0.0002;AC=764;AN=2184 GT:DS:GL:BD 0.34981686 0
1 234127272 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0021;AVGPOST=0.9989;RSQ=0.7668;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234127282 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3067;AVGPOST=0.9990;RSQ=0.9982;ERATE=0.0004;THETA=0.0003;AC=668;AN=2184 GT:DS:GL:BD 0.30586082 0
1 234127319 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2330;AVGPOST=0.9987;RSQ=0.9973;ERATE=0.0005;THETA=0.0002;AC=507;AN=2184 GT:DS:GL:BD 0.23214285 0
1 234127392 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0032;AVGPOST=0.9974;RSQ=0.6769;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234127401 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.3506;AVGPOST=0.9969;RSQ=0.9953;ERATE=0.0004;THETA=0.0002;AC=765;AN=2184 GT:DS:GL:BD 0.35027471 0
1 234127426 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.3496;AVGPOST=0.9979;RSQ=0.9967;ERATE=0.0003;THETA=0.0002;AC=764;AN=2184 GT:DS:GL:BD 0.34981686 0
1 234127527 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234127553 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234127572 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0003;AVGPOST=0.9995;RSQ=0.3042;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 234127622 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9537;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234127642 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0045;AVGPOST=0.9991;RSQ=0.9265;ERATE=0.0004;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234127752 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0076;AVGPOST=0.9987;RSQ=0.9449;ERATE=0.0003;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234127770 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234127771 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9812;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234127772 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6464;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234127894 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6994;AVGPOST=0.9968;RSQ=0.9943;ERATE=0.0006;THETA=0.0002;AC=1527;AN=2184 GT:DS:GL:BD 0.69917583 1
1 234128107 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2338;AVGPOST=0.9979;RSQ=0.9964;ERATE=0.0004;THETA=0.0004;AC=507;AN=2184 GT:DS:GL:BD 0.23214285 0
1 234128121 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234128184 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0211;AVGPOST=0.9998;RSQ=0.9951;ERATE=0.0003;THETA=0.0003;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 234128206 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8314;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234128271 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3502;AVGPOST=0.9991;RSQ=0.9984;ERATE=0.0003;THETA=0.0005;AC=765;AN=2184 GT:DS:GL:BD 0.35027471 0
1 234128278 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7364;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234128287 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7232;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234128376 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6529;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234128407 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6216;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234128435 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3500;AVGPOST=0.9991;RSQ=0.9984;ERATE=0.0003;THETA=0.0002;AC=765;AN=2184 GT:DS:GL:BD 0.35027471 0
1 234128441 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3498;AVGPOST=0.9985;RSQ=0.9973;ERATE=0.0004;THETA=0.0003;AC=765;AN=2184 GT:DS:GL:BD 0.35027471 0
1 234128443 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9009;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234128453 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234128480 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234128514 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5996;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234128590 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.7000;AVGPOST=0.9982;RSQ=0.9967;ERATE=0.0003;THETA=0.0008;AC=1528;AN=2184 GT:DS:GL:BD 0.69963372 1
1 234128604 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3501;AVGPOST=0.9994;RSQ=0.9988;ERATE=0.0003;THETA=0.0003;AC=765;AN=2184 GT:DS:GL:BD 0.35027471 0
1 234128671 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0028;AVGPOST=0.9986;RSQ=0.7851;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234128720 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3516;AVGPOST=0.9964;RSQ=0.9944;ERATE=0.0005;THETA=0.0003;AC=767;AN=2184 GT:DS:GL:BD 0.35119048 0
1 234128724 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0127;AVGPOST=0.9994;RSQ=0.9821;ERATE=0.0003;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 234128760 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6495;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234128768 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0004;AVGPOST=0.9992;RSQ=0.2553;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 234128771 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3505;AVGPOST=0.9992;RSQ=0.9984;ERATE=0.0004;THETA=0.0003;AC=765;AN=2184 GT:DS:GL:BD 0.35027471 0
1 234128860 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5663;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234128874 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3501;AVGPOST=0.9984;RSQ=0.9969;ERATE=0.0007;THETA=0.0002;AC=765;AN=2184 GT:DS:GL:BD 0.35027471 0
1 234128967 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3499;AVGPOST=0.9975;RSQ=0.9956;ERATE=0.0005;THETA=0.0004;AC=765;AN=2184 GT:DS:GL:BD 0.35027471 0
1 234129145 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.6343;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234129209 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0255;AVGPOST=0.9992;RSQ=0.9877;ERATE=0.0003;THETA=0.0004;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 234129345 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0580;AVGPOST=0.9993;RSQ=0.9942;ERATE=0.0003;THETA=0.0003;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 234129369 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.790;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7581;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234129378 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4851;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234129501 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3503;AVGPOST=0.9994;RSQ=0.9989;ERATE=0.0003;THETA=0.0002;AC=765;AN=2184 GT:DS:GL:BD 0.35027471 0
1 234129596 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8916;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234129650 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234129653 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0030;AVGPOST=0.9990;RSQ=0.8545;ERATE=0.0015;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234129671 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=1.0000;RSQ=0.9952;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234129752 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0063;AVGPOST=0.9995;RSQ=0.9673;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234129768 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9998;RSQ=0.9859;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234129792 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3503;AVGPOST=0.9996;RSQ=0.9992;ERATE=0.0003;THETA=0.0002;AC=765;AN=2184 GT:DS:GL:BD 0.35027471 0
1 234129799 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234129810 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5425;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234129824 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0023;AVGPOST=0.9995;RSQ=0.9159;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234129876 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.698;LDAF=0.0026;AVGPOST=0.9982;RSQ=0.7122;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234129946 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6832;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234129957 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0211;AVGPOST=0.9998;RSQ=0.9961;ERATE=0.0003;THETA=0.0003;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 234130013 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7238;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234130064 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0508;AVGPOST=0.9997;RSQ=0.9971;ERATE=0.0003;THETA=0.0007;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 234130122 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7366;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234130123 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9857;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234130178 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=0.9997;RSQ=0.9558;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234130198 . T TCG 27272 PASS INDEL;BAVGPOST=0.909;BRSQ=0.845;LDAF=0.4373;AVGPOST=0.8892;RSQ=0.8468;ERATE=0.0250;THETA=0.0003;AC=915;AN=2184 GT:DS:GL:BD 0.41895604 0
1 234130504 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9647;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234130507 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0072;AVGPOST=0.9996;RSQ=0.9794;ERATE=0.0003;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234130508 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3506;AVGPOST=0.9976;RSQ=0.9958;ERATE=0.0006;THETA=0.0004;AC=765;AN=2184 GT:DS:GL:BD 0.35027471 0
1 234130646 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.805;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8701;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234130818 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234130854 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0021;AVGPOST=0.9989;RSQ=0.7986;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234130877 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234130954 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7439;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234131044 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0074;AVGPOST=0.9999;RSQ=0.9940;ERATE=0.0003;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234131145 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.963;LDAF=0.3173;AVGPOST=0.9828;RSQ=0.9743;ERATE=0.0005;THETA=0.0001;AC=694;AN=2184 GT:DS:GL:BD 0.31776556 0
1 234131146 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.963;LDAF=0.3177;AVGPOST=0.9833;RSQ=0.9748;ERATE=0.0006;THETA=0.0008;AC=696;AN=2184 GT:DS:GL:BD 0.31868133 0
1 234131158 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0056;AVGPOST=0.9979;RSQ=0.8471;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234131208 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234131234 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9858;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234131251 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0508;AVGPOST=0.9999;RSQ=0.9988;ERATE=0.0003;THETA=0.0005;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 234131370 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3501;AVGPOST=0.9998;RSQ=0.9996;ERATE=0.0003;THETA=0.0005;AC=765;AN=2184 GT:DS:GL:BD 0.35027471 0
1 234131454 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234131494 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234131518 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3501;AVGPOST=0.9999;RSQ=0.9997;ERATE=0.0003;THETA=0.0004;AC=765;AN=2184 GT:DS:GL:BD 0.35027471 0
1 234131626 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0357;AVGPOST=0.9998;RSQ=0.9976;ERATE=0.0003;THETA=0.0004;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 234131631 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3503;AVGPOST=0.9984;RSQ=0.9977;ERATE=0.0003;THETA=0.0002;AC=765;AN=2184 GT:DS:GL:BD 0.35027471 0
1 234131749 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3495;AVGPOST=0.9977;RSQ=0.9959;ERATE=0.0005;THETA=0.0004;AC=763;AN=2184 GT:DS:GL:BD 0.34935898 0
1 234131784 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0358;AVGPOST=0.9996;RSQ=0.9952;ERATE=0.0003;THETA=0.0003;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 234131861 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0075;AVGPOST=0.9997;RSQ=0.9794;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234131882 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3517;AVGPOST=0.9987;RSQ=0.9975;ERATE=0.0005;THETA=0.0002;AC=768;AN=2184 GT:DS:GL:BD 0.35164836 0
1 234131909 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0011;AVGPOST=0.9984;RSQ=0.4327;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234131910 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.836;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234131914 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3516;AVGPOST=0.9966;RSQ=0.9954;ERATE=0.0004;THETA=0.0003;AC=767;AN=2184 GT:DS:GL:BD 0.35119048 0
1 234131956 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6723;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234131982 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1220;AVGPOST=0.9994;RSQ=0.9981;ERATE=0.0003;THETA=0.0005;AC=266;AN=2184 GT:DS:GL:BD 0.12179487 0
1 234132035 . T TA 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234132094 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.3503;AVGPOST=0.9985;RSQ=0.9975;ERATE=0.0004;THETA=0.0003;AC=765;AN=2184 GT:DS:GL:BD 0.35027471 0
1 234132111 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.1294;AVGPOST=0.9984;RSQ=0.9953;ERATE=0.0004;THETA=0.0002;AC=283;AN=2184 GT:DS:GL:BD 0.12957875 0
1 234132142 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0130;AVGPOST=0.9992;RSQ=0.9738;ERATE=0.0004;THETA=0.0002;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 234132152 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3503;AVGPOST=0.9972;RSQ=0.9953;ERATE=0.0009;THETA=0.0007;AC=766;AN=2184 GT:DS:GL:BD 0.35073259 0
1 234132155 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3505;AVGPOST=0.9986;RSQ=0.9977;ERATE=0.0003;THETA=0.0005;AC=766;AN=2184 GT:DS:GL:BD 0.35073259 0
1 234132173 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3398;AVGPOST=0.9984;RSQ=0.9973;ERATE=0.0003;THETA=0.0002;AC=743;AN=2184 GT:DS:GL:BD 0.34020147 0
1 234132217 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3504;AVGPOST=0.9986;RSQ=0.9977;ERATE=0.0005;THETA=0.0007;AC=766;AN=2184 GT:DS:GL:BD 0.35073259 0
1 234132287 . T TTG 14160 PASS INDEL;BAVGPOST=0.968;BRSQ=0.931;LDAF=0.3182;AVGPOST=0.9659;RSQ=0.9400;ERATE=0.0050;THETA=0.0003;AC=700;AN=2184 GT:DS:GL:BD 0.32051283 0
1 234132292 . G GGA 15638 PASS INDEL;BAVGPOST=0.970;BRSQ=0.935;LDAF=0.3160;AVGPOST=0.9612;RSQ=0.9323;ERATE=0.0082;THETA=0.0013;AC=693;AN=2184 GT:DS:GL:BD 0.31730768 0
1 234132336 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.728;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7132;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234132414 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9894;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234132418 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3511;AVGPOST=0.9979;RSQ=0.9967;ERATE=0.0005;THETA=0.0005;AC=767;AN=2184 GT:DS:GL:BD 0.35119048 0
1 234132492 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.929;LDAF=0.0154;AVGPOST=0.9973;RSQ=0.9294;ERATE=0.0003;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 234132516 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0115;AVGPOST=0.9995;RSQ=0.9813;ERATE=0.0003;THETA=0.0001;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 234132521 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0494;AVGPOST=0.9998;RSQ=0.9979;ERATE=0.0003;THETA=0.0002;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 234132569 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234132579 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.6169;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234132580 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8474;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234132610 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234132653 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3036;AVGPOST=0.9972;RSQ=0.9955;ERATE=0.0005;THETA=0.0002;AC=660;AN=2184 GT:DS:GL:BD 0.30219781 0
1 234132662 rs11372267 A AC 2837 PASS INDEL;BAVGPOST=0.997;BRSQ=0.988;LDAF=0.0338;AVGPOST=0.9992;RSQ=0.9911;ERATE=0.0003;THETA=0.0003;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 234132692 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3677;AVGPOST=0.9990;RSQ=0.9983;ERATE=0.0005;THETA=0.0026;AC=803;AN=2184 GT:DS:GL:BD 0.36767399 0
1 234132835 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6506;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234132924 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3607;AVGPOST=0.9990;RSQ=0.9984;ERATE=0.0003;THETA=0.0004;AC=788;AN=2184 GT:DS:GL:BD 0.36080587 0
1 234132963 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7116;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234132964 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234133074 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3609;AVGPOST=0.9981;RSQ=0.9967;ERATE=0.0006;THETA=0.0002;AC=788;AN=2184 GT:DS:GL:BD 0.36080587 0
1 234133122 . G GA 209 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8177;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234133139 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2505;AVGPOST=0.9996;RSQ=0.9991;ERATE=0.0003;THETA=0.0004;AC=548;AN=2184 GT:DS:GL:BD 0.25091577 0
1 234133500 . CT C 34 PASS INDEL;BAVGPOST=0.985;BRSQ=0.428;LDAF=0.0298;AVGPOST=0.9582;RSQ=0.4445;ERATE=0.0079;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 234133522 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0522;AVGPOST=0.9967;RSQ=0.9774;ERATE=0.0004;THETA=0.0005;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 234133526 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.984;LDAF=0.2206;AVGPOST=0.9962;RSQ=0.9918;ERATE=0.0008;THETA=0.0002;AC=481;AN=2184 GT:DS:GL:BD 0.22023809 0
1 234133664 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.637;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.3785;ERATE=0.0005;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234133790 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5023;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234133794 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.2200;AVGPOST=0.9984;RSQ=0.9966;ERATE=0.0005;THETA=0.0004;AC=481;AN=2184 GT:DS:GL:BD 0.22023809 0
1 234133831 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0309;AVGPOST=0.9921;RSQ=0.9090;ERATE=0.0007;THETA=0.0003;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 234133832 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2205;AVGPOST=0.9975;RSQ=0.9951;ERATE=0.0004;THETA=0.0004;AC=483;AN=2184 GT:DS:GL:BD 0.22115384 0
1 234133846 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3367;AVGPOST=0.9978;RSQ=0.9967;ERATE=0.0004;THETA=0.0003;AC=736;AN=2184 GT:DS:GL:BD 0.33699635 0
1 234133856 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6461;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234133870 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4403;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234133879 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4520;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234133889 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2207;AVGPOST=0.9992;RSQ=0.9981;ERATE=0.0003;THETA=0.0002;AC=483;AN=2184 GT:DS:GL:BD 0.22115384 0
1 234133975 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2197;AVGPOST=0.9984;RSQ=0.9968;ERATE=0.0005;THETA=0.0006;AC=480;AN=2184 GT:DS:GL:BD 0.21978022 0
1 234134033 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5316;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234134068 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.979;LDAF=0.2138;AVGPOST=0.9911;RSQ=0.9832;ERATE=0.0011;THETA=0.0005;AC=469;AN=2184 GT:DS:GL:BD 0.21474358 0
1 234134182 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0878;AVGPOST=0.9997;RSQ=0.9984;ERATE=0.0003;THETA=0.0004;AC=192;AN=2184 GT:DS:GL:BD 0.08791209 0
1 234134187 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2194;AVGPOST=0.9992;RSQ=0.9980;ERATE=0.0004;THETA=0.0009;AC=480;AN=2184 GT:DS:GL:BD 0.21978022 0
1 234134192 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.5938;AVGPOST=0.9982;RSQ=0.9968;ERATE=0.0004;THETA=0.0005;AC=1295;AN=2184 GT:DS:GL:BD 0.59294873 1
1 234134197 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0116;AVGPOST=0.9995;RSQ=0.9796;ERATE=0.0003;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 234134200 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9481;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234134261 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234134418 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234134436 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2194;AVGPOST=0.9993;RSQ=0.9983;ERATE=0.0004;THETA=0.0001;AC=480;AN=2184 GT:DS:GL:BD 0.21978022 0
1 234134520 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2344;AVGPOST=0.9975;RSQ=0.9949;ERATE=0.0005;THETA=0.0005;AC=510;AN=2184 GT:DS:GL:BD 0.23351648 0
1 234134570 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.813;LDAF=0.0021;AVGPOST=0.9989;RSQ=0.7843;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234134594 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0207;AVGPOST=0.9996;RSQ=0.9909;ERATE=0.0003;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 234134709 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0004;AVGPOST=0.9998;RSQ=0.7656;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234134725 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0129;AVGPOST=0.9993;RSQ=0.9790;ERATE=0.0003;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 234134728 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2294;AVGPOST=0.9995;RSQ=0.9987;ERATE=0.0004;THETA=0.0004;AC=502;AN=2184 GT:DS:GL:BD 0.22985348 0
1 234134757 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.8974;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234134822 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2200;AVGPOST=0.9981;RSQ=0.9961;ERATE=0.0006;THETA=0.0004;AC=480;AN=2184 GT:DS:GL:BD 0.21978022 0
1 234134850 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9244;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234134893 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234134896 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0239;AVGPOST=0.9996;RSQ=0.9931;ERATE=0.0003;THETA=0.0014;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 234134949 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234134960 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0039;AVGPOST=0.9986;RSQ=0.8624;ERATE=0.0003;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234134961 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.7739;ERATE=0.0003;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234134962 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.940;LDAF=0.0180;AVGPOST=0.9977;RSQ=0.9479;ERATE=0.0003;THETA=0.0002;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 234134963 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0109;AVGPOST=0.9992;RSQ=0.9736;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234135028 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0004;AVGPOST=0.9998;RSQ=0.7709;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234135041 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8534;ERATE=0.0003;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234135053 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2243;AVGPOST=0.9989;RSQ=0.9977;ERATE=0.0004;THETA=0.0005;AC=490;AN=2184 GT:DS:GL:BD 0.22435898 0
1 234135115 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.957;LDAF=0.2055;AVGPOST=0.9875;RSQ=0.9744;ERATE=0.0003;THETA=0.0003;AC=454;AN=2184 GT:DS:GL:BD 0.20787546 0
1 234135148 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.3746;AVGPOST=0.9991;RSQ=0.9988;ERATE=0.0003;THETA=0.0003;AC=815;AN=2184 GT:DS:GL:BD 0.37316850 0
1 234135151 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234135173 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234135215 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.2237;AVGPOST=0.9991;RSQ=0.9980;ERATE=0.0003;THETA=0.0003;AC=490;AN=2184 GT:DS:GL:BD 0.22435898 0
1 234135243 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234135271 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.2239;AVGPOST=0.9996;RSQ=0.9990;ERATE=0.0004;THETA=0.0002;AC=490;AN=2184 GT:DS:GL:BD 0.22435898 0
1 234135353 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234135441 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7223;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234135463 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9745;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234135587 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234135616 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8990;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234135662 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0064;AVGPOST=0.9998;RSQ=0.9831;ERATE=0.0003;THETA=0.0029;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234135664 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0413;AVGPOST=0.9995;RSQ=0.9945;ERATE=0.0004;THETA=0.0001;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 234135738 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.794;LDAF=0.0081;AVGPOST=0.9968;RSQ=0.8487;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 234135758 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.5999;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234135919 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0045;AVGPOST=0.9995;RSQ=0.9511;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234135936 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.889;LDAF=0.0027;AVGPOST=0.9998;RSQ=0.9607;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234135943 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.880;LDAF=0.0067;AVGPOST=0.9979;RSQ=0.8732;ERATE=0.0004;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234136140 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0019;AVGPOST=0.9996;RSQ=0.9250;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234136162 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7121;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234136171 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9474;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234136185 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6694;AVGPOST=0.9967;RSQ=0.9937;ERATE=0.0007;THETA=0.0003;AC=1460;AN=2184 GT:DS:GL:BD 0.66849816 1
1 234136188 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0494;AVGPOST=0.9997;RSQ=0.9975;ERATE=0.0003;THETA=0.0002;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 234136487 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0036;AVGPOST=0.9993;RSQ=0.9333;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234136552 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0306;AVGPOST=0.9989;RSQ=0.9845;ERATE=0.0003;THETA=0.0003;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 234136646 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234136719 . A AG 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5677;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234136760 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.7076;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234136776 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.5038;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234136808 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6768;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234136859 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.889;LDAF=0.0027;AVGPOST=0.9996;RSQ=0.9362;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234136877 . C CCTAT 588 PASS INDEL;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9167;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234136962 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2050;AVGPOST=0.9994;RSQ=0.9985;ERATE=0.0003;THETA=0.0005;AC=448;AN=2184 GT:DS:GL:BD 0.20512821 0
1 234136989 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7186;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234137082 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.968;LDAF=0.0172;AVGPOST=0.9995;RSQ=0.9892;ERATE=0.0003;THETA=0.0006;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 234137143 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0034;AVGPOST=0.9994;RSQ=0.9268;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234137315 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6301;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234137367 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5465;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234137370 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6461;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234137469 rs55853866 AG A 35111 PASS INDEL;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2488;AVGPOST=0.9970;RSQ=0.9942;ERATE=0.0005;THETA=0.0005;AC=542;AN=2184 GT:DS:GL:BD 0.24816850 0
1 234137507 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0138;AVGPOST=0.9997;RSQ=0.9905;ERATE=0.0003;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 234137565 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0156;AVGPOST=0.9989;RSQ=0.9728;ERATE=0.0005;THETA=0.0002;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 234137567 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7847;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234137666 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7828;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234137716 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.972;LDAF=0.0936;AVGPOST=0.9984;RSQ=0.9932;ERATE=0.0003;THETA=0.0003;AC=204;AN=2184 GT:DS:GL:BD 0.09340660 0
1 234137724 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.756;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7267;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234137726 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1277;AVGPOST=0.9987;RSQ=0.9956;ERATE=0.0003;THETA=0.0004;AC=279;AN=2184 GT:DS:GL:BD 0.12774725 0
1 234137756 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.1970;AVGPOST=0.9985;RSQ=0.9968;ERATE=0.0004;THETA=0.0004;AC=430;AN=2184 GT:DS:GL:BD 0.19688645 0
1 234137769 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234137779 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8912;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234137899 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.6223;AVGPOST=0.9971;RSQ=0.9953;ERATE=0.0005;THETA=0.0004;AC=1358;AN=2184 GT:DS:GL:BD 0.62179488 1
1 234137929 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5708;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234138016 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5995;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234138202 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0207;AVGPOST=0.9996;RSQ=0.9921;ERATE=0.0003;THETA=0.0007;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 234138279 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7865;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234138289 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4888;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234138317 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234138336 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0117;AVGPOST=0.9979;RSQ=0.9242;ERATE=0.0003;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234138345 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.983;LDAF=0.1117;AVGPOST=0.9947;RSQ=0.9832;ERATE=0.0003;THETA=0.0003;AC=247;AN=2184 GT:DS:GL:BD 0.11309524 0
1 234138346 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.983;LDAF=0.1116;AVGPOST=0.9947;RSQ=0.9833;ERATE=0.0003;THETA=0.0001;AC=247;AN=2184 GT:DS:GL:BD 0.11309524 0
1 234138346 . A AT 9301 PASS INDEL;BAVGPOST=0.996;BRSQ=0.983;LDAF=0.1118;AVGPOST=0.9941;RSQ=0.9812;ERATE=0.0004;THETA=0.0003;AC=247;AN=2184 GT:DS:GL:BD 0.11309524 0
1 234138404 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234138532 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8142;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234138767 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234138787 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6818;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234138829 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0032;AVGPOST=0.9984;RSQ=0.8288;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234138874 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2464;AVGPOST=0.9992;RSQ=0.9982;ERATE=0.0003;THETA=0.0004;AC=539;AN=2184 GT:DS:GL:BD 0.24679486 0
1 234139316 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6894;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234139378 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234139413 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8118;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234139440 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6075;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234139448 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.0040;AVGPOST=0.9992;RSQ=0.9110;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234139555 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0018;AVGPOST=0.9987;RSQ=0.7140;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234139556 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0038;AVGPOST=0.9987;RSQ=0.8428;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234139581 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2038;AVGPOST=0.9992;RSQ=0.9980;ERATE=0.0003;THETA=0.0001;AC=446;AN=2184 GT:DS:GL:BD 0.20421246 0
1 234139610 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.950;LDAF=0.0347;AVGPOST=0.9951;RSQ=0.9518;ERATE=0.0003;THETA=0.0004;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 234139689 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8889;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234139729 . CTTATA C 59 PASS INDEL;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234139785 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0120;AVGPOST=0.9997;RSQ=0.9870;ERATE=0.0003;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 234139863 . GCAAA G 283 PASS INDEL;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0038;AVGPOST=0.9994;RSQ=0.9278;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234139907 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0062;AVGPOST=0.9983;RSQ=0.8987;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234140043 . CA C 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0017;AVGPOST=0.9981;RSQ=0.5403;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234140246 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8118;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234140325 rs71574893 T TC 60018 PASS INDEL;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.6096;AVGPOST=0.9751;RSQ=0.9617;ERATE=0.0034;THETA=0.0025;AC=1330;AN=2184 GT:DS:GL:BD 0.60897434 1
1 234140361 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.747;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4707;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234140430 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8415;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234140545 . GC G 31 PASS INDEL;BAVGPOST=0.960;BRSQ=0.038;LDAF=0.0786;AVGPOST=0.8929;RSQ=0.4280;ERATE=0.0050;THETA=0.0003;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 234140795 . GA G 34 PASS INDEL;BAVGPOST=0.999;BRSQ=0.518;LDAF=0.0030;AVGPOST=0.9955;RSQ=0.4610;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234140901 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.983;LDAF=0.1291;AVGPOST=0.9958;RSQ=0.9864;ERATE=0.0011;THETA=0.0005;AC=283;AN=2184 GT:DS:GL:BD 0.12957875 0
1 234140999 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0037;AVGPOST=0.9963;RSQ=0.5876;ERATE=0.0006;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234141011 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6496;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234141248 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.668;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7986;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234141264 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1277;AVGPOST=0.9990;RSQ=0.9966;ERATE=0.0004;THETA=0.0004;AC=279;AN=2184 GT:DS:GL:BD 0.12774725 0
1 234141598 . GC G 433 PASS INDEL;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9385;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234141698 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.558;LDAF=0.0040;AVGPOST=0.9947;RSQ=0.5258;ERATE=0.0007;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234141783 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234141792 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0130;AVGPOST=0.9990;RSQ=0.9674;ERATE=0.0003;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 234141913 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.651;LDAF=0.0016;AVGPOST=0.9983;RSQ=0.5457;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234141954 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0074;AVGPOST=0.9996;RSQ=0.9741;ERATE=0.0003;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234142025 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9558;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234142204 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0017;AVGPOST=0.9982;RSQ=0.5899;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234142206 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5828;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234142216 rs35395216 CG C 9575 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0577;AVGPOST=0.9996;RSQ=0.9968;ERATE=0.0003;THETA=0.0003;AC=126;AN=2184 GT:DS:GL:BD 0.05769231 0
1 234142242 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1204;AVGPOST=0.9992;RSQ=0.9965;ERATE=0.0004;THETA=0.0002;AC=262;AN=2184 GT:DS:GL:BD 0.11996337 0
1 234142316 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5330;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234142321 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9314;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234142437 MERGED_DEL_2_7739 TTGCAGAAGCCAGCATGGCTGCAGCAGAATGAGGGAGTGGAAGAAGAGATGAGAGCTGGGTACAAAGCATGAGGAGTAGAGGCCTGGTAAGGACTTTGCTTTTATGCTGAATGAAGTGGGGAGCTACCATAACTGTCATTGGACCTTCCTCCTGTGGCTATTCACTTGTATATTAAGTTCATTGATGGGA T . . SV;BAVGPOST=0.997;BRSQ=0.710;LDAF=0.0037;AVGPOST=0.9973;RSQ=0.6754;ERATE=0.0006;THETA=0.0003;CIEND=-125,33;CIPOS=-151,30;END=234143182;HOMLEN=106;HOMSEQ=TGCAGAAGCCAGCATGGCTGCAGCAGAATGAGGGAGT GT:DS:GL:BD 0.00228938 0
1 234142575 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.0819;AVGPOST=0.9989;RSQ=0.9948;ERATE=0.0004;THETA=0.0003;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 234142671 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8894;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234142710 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0340;AVGPOST=0.9991;RSQ=0.9918;ERATE=0.0003;THETA=0.0004;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 234142786 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.993;LDAF=0.2464;AVGPOST=0.9979;RSQ=0.9956;ERATE=0.0006;THETA=0.0003;AC=536;AN=2184 GT:DS:GL:BD 0.24542125 0
1 234142803 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0052;AVGPOST=0.9987;RSQ=0.8925;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234142958 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0074;AVGPOST=0.9998;RSQ=0.9882;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234142964 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0042;AVGPOST=0.9989;RSQ=0.8876;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234142999 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5574;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234143041 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234143130 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0177;AVGPOST=0.9980;RSQ=0.9583;ERATE=0.0003;THETA=0.0002;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 234143175 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.7162;AVGPOST=0.9974;RSQ=0.9954;ERATE=0.0005;THETA=0.0003;AC=1564;AN=2184 GT:DS:GL:BD 0.71611720 1
1 234143181 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0106;AVGPOST=0.9999;RSQ=0.9937;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234143185 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0179;AVGPOST=0.9989;RSQ=0.9759;ERATE=0.0004;THETA=0.0050;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 234143315 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0106;AVGPOST=0.9998;RSQ=0.9902;ERATE=0.0003;THETA=0.0022;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234143320 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9996;RSQ=0.9116;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234143445 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.1365;AVGPOST=0.9988;RSQ=0.9964;ERATE=0.0003;THETA=0.0025;AC=298;AN=2184 GT:DS:GL:BD 0.13644689 0
1 234143885 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.959;LDAF=0.1117;AVGPOST=0.9940;RSQ=0.9794;ERATE=0.0003;THETA=0.0003;AC=244;AN=2184 GT:DS:GL:BD 0.11172161 0
1 234143903 . A AT 35908 PASS INDEL;BAVGPOST=0.984;BRSQ=0.972;LDAF=0.6763;AVGPOST=0.9911;RSQ=0.9851;ERATE=0.0015;THETA=0.0002;AC=1478;AN=2184 GT:DS:GL:BD 0.67673993 1
1 234143905 rs11394835 T TC 104940 PASS INDEL;BAVGPOST=0.985;BRSQ=0.972;LDAF=0.6777;AVGPOST=0.9954;RSQ=0.9923;ERATE=0.0003;THETA=0.0004;AC=1480;AN=2184 GT:DS:GL:BD 0.67765570 1
1 234143961 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8951;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234143965 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234143998 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.4232;AVGPOST=0.9980;RSQ=0.9971;ERATE=0.0003;THETA=0.0004;AC=922;AN=2184 GT:DS:GL:BD 0.42216116 0
1 234144075 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0288;AVGPOST=0.9990;RSQ=0.9876;ERATE=0.0003;THETA=0.0003;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 234144079 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.862;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8962;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234144121 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0048;AVGPOST=0.9994;RSQ=0.9509;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234144123 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0229;AVGPOST=0.9998;RSQ=0.9966;ERATE=0.0003;THETA=0.0007;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 234144157 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.747;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234144169 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6168;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234144238 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234144266 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.8145;ERATE=0.0003;THETA=0.0026;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234144297 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0131;AVGPOST=0.9985;RSQ=0.9527;ERATE=0.0005;THETA=0.0011;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 234144326 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1947;AVGPOST=0.9986;RSQ=0.9966;ERATE=0.0005;THETA=0.0032;AC=425;AN=2184 GT:DS:GL:BD 0.19459707 0
1 234144370 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0975;AVGPOST=0.9990;RSQ=0.9956;ERATE=0.0003;THETA=0.0005;AC=212;AN=2184 GT:DS:GL:BD 0.09706960 0
1 234144379 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6373;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234144538 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0335;AVGPOST=0.9996;RSQ=0.9946;ERATE=0.0003;THETA=0.0003;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 234144597 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9311;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234144764 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0239;AVGPOST=0.9997;RSQ=0.9951;ERATE=0.0003;THETA=0.0004;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 234144895 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.743;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6589;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234145101 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0367;AVGPOST=0.9995;RSQ=0.9932;ERATE=0.0003;THETA=0.0004;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 234145116 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0035;AVGPOST=0.9986;RSQ=0.8596;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234145187 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.9049;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234145215 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1252;AVGPOST=0.9986;RSQ=0.9953;ERATE=0.0004;THETA=0.0003;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 234145223 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.629;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5640;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234145224 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0173;AVGPOST=0.9997;RSQ=0.9925;ERATE=0.0003;THETA=0.0011;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 234145363 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8650;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234145373 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6633;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234145414 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9812;ERATE=0.0003;THETA=0.0014;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234145415 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.9083;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234145504 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.836;LDAF=0.0019;AVGPOST=0.9993;RSQ=0.8458;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234145518 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0166;AVGPOST=0.9988;RSQ=0.9749;ERATE=0.0004;THETA=0.0005;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 234145588 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.793;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9569;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234145600 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6772;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234145650 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234145652 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0027;AVGPOST=0.9995;RSQ=0.9359;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234145763 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.812;LDAF=0.0073;AVGPOST=0.9982;RSQ=0.8880;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234145899 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.962;LDAF=0.0598;AVGPOST=0.9940;RSQ=0.9575;ERATE=0.0004;THETA=0.0008;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 234146354 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0076;AVGPOST=0.9979;RSQ=0.8901;ERATE=0.0004;THETA=0.0018;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234146384 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0049;AVGPOST=0.9983;RSQ=0.8767;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234146421 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7607;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234146424 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0046;AVGPOST=0.9996;RSQ=0.9647;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234146663 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1256;AVGPOST=0.9982;RSQ=0.9936;ERATE=0.0004;THETA=0.0016;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 234146693 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.5762;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234146726 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0013;AVGPOST=0.9997;RSQ=0.9159;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234146828 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.773;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234147089 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234147097 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6907;ERATE=0.0003;THETA=0.0054;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234147138 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0020;AVGPOST=0.9982;RSQ=0.6348;ERATE=0.0005;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234147235 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.7072;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234147242 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8972;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234147250 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0079;AVGPOST=0.9997;RSQ=0.9807;ERATE=0.0003;THETA=0.0009;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 234147298 . C CA 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234147507 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234147525 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6526;ERATE=0.0003;THETA=0.0046;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234147554 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0029;AVGPOST=0.9971;RSQ=0.6001;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234147676 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.971;LDAF=0.4014;AVGPOST=0.9791;RSQ=0.9708;ERATE=0.0024;THETA=0.0004;AC=877;AN=2184 GT:DS:GL:BD 0.40155679 0
1 234147703 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.786;LDAF=0.0045;AVGPOST=0.9989;RSQ=0.9125;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234147706 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8858;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234147710 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234147862 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.862;LDAF=0.0279;AVGPOST=0.9921;RSQ=0.8958;ERATE=0.0003;THETA=0.0011;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 234147867 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8894;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234147964 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0326;AVGPOST=0.9981;RSQ=0.9755;ERATE=0.0005;THETA=0.0007;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 234147980 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.726;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5552;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234147985 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0040;AVGPOST=0.9989;RSQ=0.8989;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234147997 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0069;AVGPOST=0.9976;RSQ=0.8537;ERATE=0.0003;THETA=0.0061;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234148253 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0473;AVGPOST=0.9984;RSQ=0.9871;ERATE=0.0004;THETA=0.0048;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 234148355 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0077;AVGPOST=0.9993;RSQ=0.9580;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234148381 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0330;AVGPOST=0.9996;RSQ=0.9947;ERATE=0.0003;THETA=0.0021;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 234148390 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0098;AVGPOST=0.9982;RSQ=0.9281;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234148403 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.563;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4994;ERATE=0.0006;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234148558 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4121;AVGPOST=0.9954;RSQ=0.9926;ERATE=0.0003;THETA=0.0004;AC=902;AN=2184 GT:DS:GL:BD 0.41300365 0
1 234148594 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8142;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234148601 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0260;AVGPOST=0.9998;RSQ=0.9972;ERATE=0.0003;THETA=0.0003;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 234148652 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.714;LDAF=0.0066;AVGPOST=0.9951;RSQ=0.7258;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234148710 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6133;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234148787 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7564;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234148929 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.774;LDAF=0.0034;AVGPOST=0.9968;RSQ=0.6397;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234149150 . TAAAC T 153 PASS INDEL;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5442;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234149279 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.762;LDAF=0.0025;AVGPOST=0.9963;RSQ=0.5368;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234149349 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6759;ERATE=0.0003;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234149413 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1141;AVGPOST=0.9984;RSQ=0.9936;ERATE=0.0003;THETA=0.0004;AC=248;AN=2184 GT:DS:GL:BD 0.11355311 0
1 234149638 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5166;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234149704 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1178;AVGPOST=0.9976;RSQ=0.9916;ERATE=0.0003;THETA=0.0004;AC=258;AN=2184 GT:DS:GL:BD 0.11813187 0
1 234149809 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0261;AVGPOST=0.9998;RSQ=0.9962;ERATE=0.0003;THETA=0.0003;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 234149825 . G GA 555 PASS INDEL;BAVGPOST=0.999;BRSQ=0.896;LDAF=0.0062;AVGPOST=0.9974;RSQ=0.8376;ERATE=0.0008;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234149866 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0411;AVGPOST=0.9993;RSQ=0.9931;ERATE=0.0003;THETA=0.0009;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 234149881 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7063;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234149910 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0260;AVGPOST=0.9998;RSQ=0.9969;ERATE=0.0003;THETA=0.0008;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 234149950 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0071;AVGPOST=0.9995;RSQ=0.9692;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234150071 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2508;AVGPOST=0.9965;RSQ=0.9926;ERATE=0.0003;THETA=0.0010;AC=545;AN=2184 GT:DS:GL:BD 0.24954212 0
1 234150153 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5993;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234150184 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0247;AVGPOST=0.9994;RSQ=0.9889;ERATE=0.0003;THETA=0.0004;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 234150241 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7597;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234150464 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0029;AVGPOST=0.9979;RSQ=0.7142;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234150516 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6160;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234150520 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0263;AVGPOST=0.9994;RSQ=0.9903;ERATE=0.0004;THETA=0.0005;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 234150863 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.662;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4133;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234151019 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.3887;ERATE=0.0007;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234151104 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.667;LDAF=0.0030;AVGPOST=0.9990;RSQ=0.8342;ERATE=0.0005;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234151224 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0330;AVGPOST=0.9998;RSQ=0.9973;ERATE=0.0003;THETA=0.0002;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 234151237 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0266;AVGPOST=0.9988;RSQ=0.9852;ERATE=0.0003;THETA=0.0003;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 234151250 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.874;LDAF=0.0073;AVGPOST=0.9982;RSQ=0.9119;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234151266 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6082;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234151391 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234151464 . CAT C 205 PASS INDEL;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0032;AVGPOST=0.9989;RSQ=0.8425;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234151674 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234151830 . T TA 1022 PASS INDEL;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0068;AVGPOST=0.9993;RSQ=0.9586;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234151981 . AT A 7 PASS INDEL;BAVGPOST=0.946;BRSQ=0.015;LDAF=0.0769;AVGPOST=0.8795;RSQ=0.3442;ERATE=0.0061;THETA=0.0004;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 234152086 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0796;AVGPOST=0.9997;RSQ=0.9983;ERATE=0.0003;THETA=0.0006;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 234152124 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234152153 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7986;ERATE=0.0003;THETA=0.0017;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234152572 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.729;LDAF=0.0040;AVGPOST=0.9977;RSQ=0.7858;ERATE=0.0009;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234152598 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7610;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234152628 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6419;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234152669 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0026;AVGPOST=0.9989;RSQ=0.8474;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234152713 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.870;LDAF=0.0074;AVGPOST=0.9984;RSQ=0.9199;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234152764 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6566;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234152795 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0797;AVGPOST=0.9995;RSQ=0.9969;ERATE=0.0004;THETA=0.0004;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 234152903 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234152939 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1082;AVGPOST=0.9979;RSQ=0.9916;ERATE=0.0003;THETA=0.0006;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 234153015 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5198;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234153068 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0031;AVGPOST=0.9994;RSQ=0.9296;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234153133 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.867;LDAF=0.0045;AVGPOST=0.9965;RSQ=0.7028;ERATE=0.0006;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234153188 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4359;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234153255 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.725;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.3689;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234153274 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.746;LDAF=0.0094;AVGPOST=0.9945;RSQ=0.7769;ERATE=0.0005;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234153295 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.711;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4124;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234153353 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.858;LDAF=0.0468;AVGPOST=0.9728;RSQ=0.7964;ERATE=0.0008;THETA=0.0005;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 234153391 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.981;LDAF=0.1087;AVGPOST=0.9971;RSQ=0.9888;ERATE=0.0004;THETA=0.0003;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 234153408 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.944;LDAF=0.0817;AVGPOST=0.9944;RSQ=0.9711;ERATE=0.0011;THETA=0.0025;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 234153409 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.662;LDAF=0.0069;AVGPOST=0.9923;RSQ=0.5715;ERATE=0.0014;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234153524 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.473;LDAF=0.0050;AVGPOST=0.9926;RSQ=0.4068;ERATE=0.0013;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234153761 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0362;AVGPOST=0.9996;RSQ=0.9957;ERATE=0.0003;THETA=0.0003;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 234153924 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8847;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234153970 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0330;AVGPOST=0.9996;RSQ=0.9941;ERATE=0.0003;THETA=0.0005;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 234153983 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9995;RSQ=0.9195;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234154066 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0329;AVGPOST=0.9999;RSQ=0.9980;ERATE=0.0003;THETA=0.0013;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 234154095 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5782;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234154215 . TC T 149 PASS INDEL;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6380;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234154223 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0361;AVGPOST=0.9999;RSQ=0.9989;ERATE=0.0003;THETA=0.0004;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 234154224 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0253;AVGPOST=0.9994;RSQ=0.9907;ERATE=0.0003;THETA=0.0003;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 234154335 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0185;AVGPOST=0.9991;RSQ=0.9837;ERATE=0.0003;THETA=0.0004;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 234154436 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5624;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234154643 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234154775 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0050;AVGPOST=0.9991;RSQ=0.9362;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234154862 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1231;AVGPOST=0.9982;RSQ=0.9944;ERATE=0.0003;THETA=0.0003;AC=270;AN=2184 GT:DS:GL:BD 0.12362637 0
1 234154902 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234154952 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.870;LDAF=0.0004;AVGPOST=0.9993;RSQ=0.1256;ERATE=0.0003;THETA=0.0013;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 234155021 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0090;AVGPOST=0.9989;RSQ=0.9520;ERATE=0.0003;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 234155088 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1079;AVGPOST=0.9999;RSQ=0.9996;ERATE=0.0003;THETA=0.0004;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 234155113 rs10631137 T TGA 24089 PASS INDEL;BAVGPOST=0.994;BRSQ=0.983;LDAF=0.1905;AVGPOST=0.9952;RSQ=0.9894;ERATE=0.0023;THETA=0.0004;AC=418;AN=2184 GT:DS:GL:BD 0.19139194 0
1 234155138 . CAG C 554 PASS INDEL;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0040;AVGPOST=0.9991;RSQ=0.9107;ERATE=0.0004;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234155296 . GT G 1085 PASS INDEL;BAVGPOST=0.995;BRSQ=0.873;LDAF=0.0235;AVGPOST=0.9908;RSQ=0.8482;ERATE=0.0010;THETA=0.0006;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 234155303 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0537;AVGPOST=0.9995;RSQ=0.9953;ERATE=0.0004;THETA=0.0005;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 234155362 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234155392 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0023;AVGPOST=0.9988;RSQ=0.7629;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234155407 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9695;ERATE=0.0003;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234155561 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0334;AVGPOST=0.9999;RSQ=0.9987;ERATE=0.0003;THETA=0.0002;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 234155589 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234155725 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7163;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234155735 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0364;AVGPOST=0.9994;RSQ=0.9935;ERATE=0.0003;THETA=0.0004;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 234155821 . CTA C 4396 PASS INDEL;BAVGPOST=0.996;BRSQ=0.936;LDAF=0.0211;AVGPOST=0.9975;RSQ=0.9471;ERATE=0.0004;THETA=0.0004;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 234155882 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.604;LDAF=0.0124;AVGPOST=0.9829;RSQ=0.5106;ERATE=0.0035;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234155943 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0078;AVGPOST=1.0000;RSQ=0.9972;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 234156081 . A AC 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0028;AVGPOST=0.9952;RSQ=0.3860;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234156106 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234156194 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1082;AVGPOST=0.9988;RSQ=0.9946;ERATE=0.0005;THETA=0.0005;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 234156219 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1969;AVGPOST=0.9952;RSQ=0.9888;ERATE=0.0007;THETA=0.0004;AC=428;AN=2184 GT:DS:GL:BD 0.19597070 0
1 234156255 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.968;LDAF=0.0371;AVGPOST=0.9977;RSQ=0.9800;ERATE=0.0004;THETA=0.0012;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 234156477 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.855;LDAF=0.0028;AVGPOST=0.9987;RSQ=0.8294;ERATE=0.0003;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234156636 . A AT 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0020;AVGPOST=0.9977;RSQ=0.5845;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234156851 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.865;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8793;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234156872 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6464;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234156934 rs111945960 C CCAGACCTTG 20347 PASS INDEL;BAVGPOST=0.981;BRSQ=0.915;LDAF=0.1127;AVGPOST=0.9791;RSQ=0.9317;ERATE=0.0017;THETA=0.0003;AC=251;AN=2184 GT:DS:GL:BD 0.11492674 0
1 234156947 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0047;AVGPOST=0.9962;RSQ=0.6947;ERATE=0.0005;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234156948 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.601;LDAF=0.0022;AVGPOST=0.9974;RSQ=0.5946;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234157118 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7417;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234157231 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6526;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234157415 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0873;AVGPOST=0.9995;RSQ=0.9969;ERATE=0.0003;THETA=0.0002;AC=191;AN=2184 GT:DS:GL:BD 0.08745421 0
1 234157478 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.947;LDAF=0.0181;AVGPOST=0.9990;RSQ=0.9817;ERATE=0.0003;THETA=0.0004;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 234157556 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.8026;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234157623 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234157643 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9571;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234157688 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234157721 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1079;AVGPOST=0.9999;RSQ=0.9994;ERATE=0.0003;THETA=0.0003;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 234157767 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0152;AVGPOST=0.9999;RSQ=0.9960;ERATE=0.0003;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 234157777 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7359;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234157804 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234158008 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1079;AVGPOST=0.9997;RSQ=0.9985;ERATE=0.0004;THETA=0.0004;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 234158043 . AAGAG A 209 PASS INDEL;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0039;AVGPOST=0.9987;RSQ=0.8542;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234158159 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.899;LDAF=0.0209;AVGPOST=0.9941;RSQ=0.8886;ERATE=0.0008;THETA=0.0004;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 234158215 rs71852512 GT G 55812 PASS INDEL;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.7284;AVGPOST=0.9958;RSQ=0.9924;ERATE=0.0010;THETA=0.0005;AC=1589;AN=2184 GT:DS:GL:BD 0.72756410 1
1 234158356 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6404;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234158449 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.745;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5442;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234158495 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0049;AVGPOST=0.9993;RSQ=0.9289;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234158514 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.7310;AVGPOST=0.9961;RSQ=0.9933;ERATE=0.0008;THETA=0.0003;AC=1595;AN=2184 GT:DS:GL:BD 0.73031133 1
1 234158543 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0517;AVGPOST=0.9991;RSQ=0.9932;ERATE=0.0003;THETA=0.0002;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 234158544 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0033;AVGPOST=0.9976;RSQ=0.7099;ERATE=0.0006;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234158570 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4420;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234158618 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0345;AVGPOST=0.9994;RSQ=0.9926;ERATE=0.0004;THETA=0.0003;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 234158655 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0041;AVGPOST=0.9999;RSQ=0.9841;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234158773 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0103;AVGPOST=0.9995;RSQ=0.9817;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234158847 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.6945;AVGPOST=0.9987;RSQ=0.9976;ERATE=0.0005;THETA=0.0003;AC=1515;AN=2184 GT:DS:GL:BD 0.69368130 1
1 234158951 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0030;AVGPOST=0.9991;RSQ=0.8793;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234159021 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0008;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234159036 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8468;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234159087 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6325;AVGPOST=0.9992;RSQ=0.9986;ERATE=0.0005;THETA=0.0002;AC=1380;AN=2184 GT:DS:GL:BD 0.63186812 1
1 234159106 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.780;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7374;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234159144 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.6146;AVGPOST=0.9977;RSQ=0.9969;ERATE=0.0004;THETA=0.0005;AC=1339;AN=2184 GT:DS:GL:BD 0.61309522 1
1 234159273 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234159321 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7876;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234159344 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234159428 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234159454 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6968;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234159461 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7330;AVGPOST=0.9983;RSQ=0.9971;ERATE=0.0004;THETA=0.0018;AC=1599;AN=2184 GT:DS:GL:BD 0.73214287 1
1 234159508 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6963;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234159672 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.7264;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234159698 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0339;AVGPOST=0.9996;RSQ=0.9949;ERATE=0.0003;THETA=0.0004;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 234159957 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.6227;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234160097 . GC G 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.754;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4037;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234160106 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0715;AVGPOST=0.9995;RSQ=0.9966;ERATE=0.0003;THETA=0.0004;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 234160110 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234160111 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5611;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234160181 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0793;AVGPOST=0.9993;RSQ=0.9964;ERATE=0.0003;THETA=0.0002;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 234160339 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1084;AVGPOST=0.9984;RSQ=0.9944;ERATE=0.0003;THETA=0.0005;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 234160347 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.7329;AVGPOST=0.9975;RSQ=0.9957;ERATE=0.0003;THETA=0.0005;AC=1599;AN=2184 GT:DS:GL:BD 0.73214287 1
1 234160467 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7095;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234160488 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8802;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234160556 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234160614 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234160661 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234160727 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7300;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234161001 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9766;ERATE=0.0004;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234161067 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0049;AVGPOST=0.9983;RSQ=0.8612;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234161118 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5285;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234161211 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.937;LDAF=0.0123;AVGPOST=0.9973;RSQ=0.9193;ERATE=0.0003;THETA=0.0008;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 234161265 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0028;AVGPOST=0.9976;RSQ=0.6913;ERATE=0.0004;THETA=0.0015;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234161328 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6432;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234161346 . TG T 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5995;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234161397 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8525;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234161512 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.854;LDAF=0.0046;AVGPOST=0.9990;RSQ=0.9214;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234161626 . C CA 9113 PASS INDEL;BAVGPOST=0.986;BRSQ=0.969;LDAF=0.2428;AVGPOST=0.9888;RSQ=0.9804;ERATE=0.0003;THETA=0.0003;AC=531;AN=2184 GT:DS:GL:BD 0.24313186 0
1 234161629 rs56218718 A AG 37305 PASS INDEL;BAVGPOST=0.987;BRSQ=0.969;LDAF=0.2427;AVGPOST=0.9885;RSQ=0.9797;ERATE=0.0003;THETA=0.0002;AC=531;AN=2184 GT:DS:GL:BD 0.24313186 0
1 234161630 . T TC 36862 PASS INDEL;BAVGPOST=0.987;BRSQ=0.969;LDAF=0.2431;AVGPOST=0.9881;RSQ=0.9791;ERATE=0.0003;THETA=0.0009;AC=531;AN=2184 GT:DS:GL:BD 0.24313186 0
1 234161723 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.660;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6533;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234161730 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0198;AVGPOST=0.9991;RSQ=0.9803;ERATE=0.0003;THETA=0.0006;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 234161743 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2537;AVGPOST=0.9982;RSQ=0.9967;ERATE=0.0004;THETA=0.0004;AC=552;AN=2184 GT:DS:GL:BD 0.25274727 0
1 234161747 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.950;LDAF=0.0333;AVGPOST=0.9949;RSQ=0.9392;ERATE=0.0003;THETA=0.0002;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 234161767 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.679;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4916;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234161782 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0034;AVGPOST=0.9979;RSQ=0.7531;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234161820 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9209;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234161823 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3760;AVGPOST=0.9984;RSQ=0.9974;ERATE=0.0004;THETA=0.0007;AC=820;AN=2184 GT:DS:GL:BD 0.37545788 0
1 234161860 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7894;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234161868 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0715;AVGPOST=0.9995;RSQ=0.9967;ERATE=0.0003;THETA=0.0003;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 234162144 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0351;AVGPOST=0.9987;RSQ=0.9890;ERATE=0.0003;THETA=0.0006;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 234162150 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8519;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234162162 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6295;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234162224 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5614;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234162245 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0350;AVGPOST=0.9984;RSQ=0.9855;ERATE=0.0003;THETA=0.0004;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 234162362 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7793;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234162376 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234162550 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2533;AVGPOST=0.9989;RSQ=0.9977;ERATE=0.0004;THETA=0.0004;AC=551;AN=2184 GT:DS:GL:BD 0.25228938 0
1 234162757 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234162781 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8540;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234162886 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8689;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234162957 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2507;AVGPOST=0.9994;RSQ=0.9990;ERATE=0.0003;THETA=0.0003;AC=546;AN=2184 GT:DS:GL:BD 0.25000000 0
1 234163041 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0032;AVGPOST=0.9978;RSQ=0.7669;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234163239 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5316;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234163341 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234163353 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0075;AVGPOST=0.9995;RSQ=0.9735;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234163399 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8036;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234163619 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6188;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234163789 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234163798 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6466;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234163840 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3040;AVGPOST=0.9963;RSQ=0.9939;ERATE=0.0007;THETA=0.0004;AC=663;AN=2184 GT:DS:GL:BD 0.30357143 0
1 234163954 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9687;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234163990 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0412;AVGPOST=0.9982;RSQ=0.9862;ERATE=0.0003;THETA=0.0002;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 234164017 . CTGT C 97 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6199;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234164051 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.4592;AVGPOST=0.9992;RSQ=0.9987;ERATE=0.0003;THETA=0.0004;AC=1002;AN=2184 GT:DS:GL:BD 0.45879120 0
1 234164190 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7896;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234164227 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.978;LDAF=0.0418;AVGPOST=0.9960;RSQ=0.9688;ERATE=0.0003;THETA=0.0003;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 234164287 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0084;AVGPOST=0.9986;RSQ=0.9384;ERATE=0.0003;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 234164343 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234164359 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0354;AVGPOST=0.9993;RSQ=0.9922;ERATE=0.0003;THETA=0.0003;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 234164383 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2273;AVGPOST=0.9990;RSQ=0.9977;ERATE=0.0006;THETA=0.0003;AC=497;AN=2184 GT:DS:GL:BD 0.22756410 0
1 234164432 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234164445 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8525;ERATE=0.0004;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234164510 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234164515 . A AAT 11060 PASS INDEL;BAVGPOST=0.985;BRSQ=0.975;LDAF=0.2983;AVGPOST=0.9906;RSQ=0.9837;ERATE=0.0006;THETA=0.0005;AC=655;AN=2184 GT:DS:GL:BD 0.29990843 0
1 234164516 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.3023;AVGPOST=0.9982;RSQ=0.9970;ERATE=0.0003;THETA=0.0003;AC=658;AN=2184 GT:DS:GL:BD 0.30128205 0
1 234164519 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.3023;AVGPOST=0.9981;RSQ=0.9968;ERATE=0.0003;THETA=0.0005;AC=658;AN=2184 GT:DS:GL:BD 0.30128205 0
1 234164640 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0714;AVGPOST=0.9995;RSQ=0.9968;ERATE=0.0003;THETA=0.0002;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 234164827 . TC T 130 PASS INDEL;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0022;AVGPOST=0.9996;RSQ=0.9270;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234164846 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.819;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7132;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234164877 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0041;AVGPOST=1.0000;RSQ=0.9946;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234164879 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2926;AVGPOST=0.9997;RSQ=0.9995;ERATE=0.0003;THETA=0.0003;AC=640;AN=2184 GT:DS:GL:BD 0.29304031 0
1 234164931 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5966;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234164937 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7110;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234164980 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5753;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234165006 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2212;AVGPOST=0.9993;RSQ=0.9985;ERATE=0.0004;THETA=0.0007;AC=484;AN=2184 GT:DS:GL:BD 0.22161172 0
1 234165257 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.966;LDAF=0.0251;AVGPOST=0.9985;RSQ=0.9782;ERATE=0.0003;THETA=0.0001;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 234165283 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0004;AVGPOST=0.9998;RSQ=0.7999;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234165357 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234165409 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0217;AVGPOST=0.9995;RSQ=0.9900;ERATE=0.0003;THETA=0.0006;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 234165481 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.664;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0003;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234165490 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2896;AVGPOST=0.9968;RSQ=0.9952;ERATE=0.0006;THETA=0.0004;AC=636;AN=2184 GT:DS:GL:BD 0.29120880 0
1 234165584 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.763;LDAF=0.0035;AVGPOST=0.9989;RSQ=0.8616;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234165719 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1189;AVGPOST=0.9979;RSQ=0.9934;ERATE=0.0006;THETA=0.0002;AC=261;AN=2184 GT:DS:GL:BD 0.11950549 0
1 234165803 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2218;AVGPOST=0.9989;RSQ=0.9976;ERATE=0.0005;THETA=0.0003;AC=486;AN=2184 GT:DS:GL:BD 0.22252747 0
1 234165852 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5204;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234165854 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5229;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234165888 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6705;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234165945 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0030;AVGPOST=0.9984;RSQ=0.7818;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234166056 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7416;AVGPOST=0.9993;RSQ=0.9985;ERATE=0.0003;THETA=0.0003;AC=1619;AN=2184 GT:DS:GL:BD 0.74130034 1
1 234166129 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2905;AVGPOST=0.9991;RSQ=0.9984;ERATE=0.0004;THETA=0.0004;AC=636;AN=2184 GT:DS:GL:BD 0.29120880 0
1 234166138 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2907;AVGPOST=0.9995;RSQ=0.9991;ERATE=0.0003;THETA=0.0004;AC=636;AN=2184 GT:DS:GL:BD 0.29120880 0
1 234166242 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.700;LDAF=0.0024;AVGPOST=0.9991;RSQ=0.8646;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234166302 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0114;AVGPOST=1.0000;RSQ=0.9983;ERATE=0.0003;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 234166362 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0686;AVGPOST=0.9997;RSQ=0.9982;ERATE=0.0003;THETA=0.0004;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 234166440 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0004;AVGPOST=0.9996;RSQ=0.6023;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234166447 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.815;LDAF=0.0061;AVGPOST=0.9970;RSQ=0.8008;ERATE=0.0009;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234166576 . AC A 100 PASS INDEL;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234166635 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1315;AVGPOST=0.9987;RSQ=0.9964;ERATE=0.0003;THETA=0.0001;AC=287;AN=2184 GT:DS:GL:BD 0.13141026 0
1 234166665 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234166752 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7858;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234166807 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2909;AVGPOST=0.9993;RSQ=0.9988;ERATE=0.0005;THETA=0.0003;AC=636;AN=2184 GT:DS:GL:BD 0.29120880 0
1 234166822 . CT C 243 PASS INDEL;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8104;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234166894 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0110;AVGPOST=1.0000;RSQ=0.9980;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234166937 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2907;AVGPOST=0.9992;RSQ=0.9987;ERATE=0.0003;THETA=0.0002;AC=636;AN=2184 GT:DS:GL:BD 0.29120880 0
1 234166967 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234167098 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5400;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234167136 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7417;AVGPOST=0.9997;RSQ=0.9993;ERATE=0.0003;THETA=0.0048;AC=1619;AN=2184 GT:DS:GL:BD 0.74130034 1
1 234167196 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.766;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234167202 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2902;AVGPOST=0.9993;RSQ=0.9988;ERATE=0.0004;THETA=0.0004;AC=635;AN=2184 GT:DS:GL:BD 0.29075092 0
1 234167222 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0042;AVGPOST=0.9991;RSQ=0.9173;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234167233 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2900;AVGPOST=0.9988;RSQ=0.9980;ERATE=0.0003;THETA=0.0004;AC=635;AN=2184 GT:DS:GL:BD 0.29075092 0
1 234167236 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.2900;AVGPOST=0.9987;RSQ=0.9978;ERATE=0.0004;THETA=0.0003;AC=635;AN=2184 GT:DS:GL:BD 0.29075092 0
1 234167297 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1577;AVGPOST=0.9994;RSQ=0.9980;ERATE=0.0003;THETA=0.0004;AC=345;AN=2184 GT:DS:GL:BD 0.15796703 0
1 234167298 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1332;AVGPOST=0.9986;RSQ=0.9964;ERATE=0.0004;THETA=0.0024;AC=290;AN=2184 GT:DS:GL:BD 0.13278389 0
1 234167350 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4619;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234167428 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1079;AVGPOST=0.9992;RSQ=0.9963;ERATE=0.0003;THETA=0.0025;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 234167561 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0072;AVGPOST=0.9994;RSQ=0.9690;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234167699 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2798;AVGPOST=0.9996;RSQ=0.9993;ERATE=0.0003;THETA=0.0003;AC=612;AN=2184 GT:DS:GL:BD 0.28021979 0
1 234167708 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2798;AVGPOST=0.9992;RSQ=0.9986;ERATE=0.0004;THETA=0.0002;AC=612;AN=2184 GT:DS:GL:BD 0.28021979 0
1 234167770 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.729;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7871;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234167793 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0110;AVGPOST=0.9984;RSQ=0.9449;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234167817 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2801;AVGPOST=0.9981;RSQ=0.9972;ERATE=0.0005;THETA=0.0003;AC=612;AN=2184 GT:DS:GL:BD 0.28021979 0
1 234167836 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8668;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234167843 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2798;AVGPOST=0.9970;RSQ=0.9953;ERATE=0.0006;THETA=0.0002;AC=613;AN=2184 GT:DS:GL:BD 0.28067765 0
1 234167857 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2794;AVGPOST=0.9982;RSQ=0.9971;ERATE=0.0004;THETA=0.0002;AC=612;AN=2184 GT:DS:GL:BD 0.28021979 0
1 234167924 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.640;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234167991 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6550;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234168028 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9341;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234168031 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0027;AVGPOST=0.9986;RSQ=0.7985;ERATE=0.0006;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234168034 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2798;AVGPOST=0.9978;RSQ=0.9969;ERATE=0.0004;THETA=0.0003;AC=614;AN=2184 GT:DS:GL:BD 0.28113553 0
1 234168039 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234168104 . A AT 2349 PASS INDEL;BAVGPOST=0.998;BRSQ=0.977;LDAF=0.0354;AVGPOST=0.9955;RSQ=0.9518;ERATE=0.0005;THETA=0.0003;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 234168116 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.966;LDAF=0.2652;AVGPOST=0.9663;RSQ=0.9439;ERATE=0.0097;THETA=0.0003;AC=578;AN=2184 GT:DS:GL:BD 0.26465201 0
1 234168150 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1579;AVGPOST=0.9991;RSQ=0.9971;ERATE=0.0003;THETA=0.0006;AC=346;AN=2184 GT:DS:GL:BD 0.15842491 0
1 234168151 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2819;AVGPOST=0.9975;RSQ=0.9954;ERATE=0.0006;THETA=0.0002;AC=613;AN=2184 GT:DS:GL:BD 0.28067765 0
1 234168199 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234168271 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6817;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234168293 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7479;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234168302 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6596;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234168401 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0688;AVGPOST=0.9994;RSQ=0.9960;ERATE=0.0003;THETA=0.0004;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 234168427 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0035;AVGPOST=0.9989;RSQ=0.8690;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234168534 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234168659 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1189;AVGPOST=0.9993;RSQ=0.9968;ERATE=0.0004;THETA=0.0003;AC=259;AN=2184 GT:DS:GL:BD 0.11858974 0
1 234168686 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5465;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234168697 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0217;AVGPOST=0.9993;RSQ=0.9860;ERATE=0.0004;THETA=0.0001;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 234168734 . T TA 41 PASS INDEL;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4899;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234168744 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6707;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234168915 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.863;LDAF=0.0126;AVGPOST=0.9974;RSQ=0.9349;ERATE=0.0003;THETA=0.0001;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 234168962 . C CT 61 PASS INDEL;BAVGPOST=0.999;BRSQ=0.854;LDAF=0.0041;AVGPOST=0.9967;RSQ=0.7067;ERATE=0.0011;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234168964 . T TG 59 PASS INDEL;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0050;AVGPOST=0.9942;RSQ=0.5710;ERATE=0.0022;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234168968 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.982;LDAF=0.2818;AVGPOST=0.9963;RSQ=0.9930;ERATE=0.0011;THETA=0.0003;AC=614;AN=2184 GT:DS:GL:BD 0.28113553 0
1 234169053 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.690;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234169081 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2906;AVGPOST=0.9983;RSQ=0.9972;ERATE=0.0006;THETA=0.0003;AC=635;AN=2184 GT:DS:GL:BD 0.29075092 0
1 234169089 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.715;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6885;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234169184 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0073;AVGPOST=0.9947;RSQ=0.7336;ERATE=0.0005;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234169268 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.9073;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234169324 . TG T 186 PASS INDEL;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.6875;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234169357 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0116;AVGPOST=0.9987;RSQ=0.9543;ERATE=0.0003;THETA=0.0001;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 234169385 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1195;AVGPOST=0.9995;RSQ=0.9984;ERATE=0.0003;THETA=0.0012;AC=261;AN=2184 GT:DS:GL:BD 0.11950549 0
1 234169462 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2812;AVGPOST=0.9986;RSQ=0.9973;ERATE=0.0006;THETA=0.0006;AC=612;AN=2184 GT:DS:GL:BD 0.28021979 0
1 234169466 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234169544 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0127;AVGPOST=0.9990;RSQ=0.9663;ERATE=0.0003;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 234169696 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234169765 . CTA C 528 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9979;RSQ=0.7661;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234169767 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1580;AVGPOST=0.9991;RSQ=0.9972;ERATE=0.0004;THETA=0.0002;AC=345;AN=2184 GT:DS:GL:BD 0.15796703 0
1 234169880 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7566;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234169913 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1079;AVGPOST=0.9992;RSQ=0.9964;ERATE=0.0004;THETA=0.0003;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 234169933 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2790;AVGPOST=0.9990;RSQ=0.9985;ERATE=0.0003;THETA=0.0004;AC=611;AN=2184 GT:DS:GL:BD 0.27976191 0
1 234170041 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2815;AVGPOST=0.9994;RSQ=0.9987;ERATE=0.0004;THETA=0.0002;AC=613;AN=2184 GT:DS:GL:BD 0.28067765 0
1 234170184 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234170260 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2816;AVGPOST=0.9980;RSQ=0.9965;ERATE=0.0004;THETA=0.0003;AC=613;AN=2184 GT:DS:GL:BD 0.28067765 0
1 234170290 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.6708;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234170306 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0096;AVGPOST=0.9978;RSQ=0.9121;ERATE=0.0004;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234170359 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.972;LDAF=0.1587;AVGPOST=0.9948;RSQ=0.9857;ERATE=0.0007;THETA=0.0002;AC=345;AN=2184 GT:DS:GL:BD 0.15796703 0
1 234170360 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.923;LDAF=0.0114;AVGPOST=0.9989;RSQ=0.9521;ERATE=0.0004;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234170378 . TGCCTCA T 11715 PASS INDEL;BAVGPOST=0.982;BRSQ=0.932;LDAF=0.1157;AVGPOST=0.9873;RSQ=0.9638;ERATE=0.0021;THETA=0.0003;AC=252;AN=2184 GT:DS:GL:BD 0.11538462 0
1 234170382 rs113229325 TCAGCCTCC T 28075 PASS INDEL;BAVGPOST=0.995;BRSQ=0.982;LDAF=0.1207;AVGPOST=0.9979;RSQ=0.9934;ERATE=0.0004;THETA=0.0003;AC=265;AN=2184 GT:DS:GL:BD 0.12133700 0
1 234170385 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.937;BRSQ=0.841;LDAF=0.2094;AVGPOST=0.9612;RSQ=0.9280;ERATE=0.0022;THETA=0.0002;AC=460;AN=2184 GT:DS:GL:BD 0.21062271 0
1 234170398 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0038;AVGPOST=0.9951;RSQ=0.5224;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234170427 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0145;AVGPOST=0.9962;RSQ=0.9113;ERATE=0.0006;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 234170534 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1195;AVGPOST=0.9994;RSQ=0.9979;ERATE=0.0004;THETA=0.0004;AC=261;AN=2184 GT:DS:GL:BD 0.11950549 0
1 234170698 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0025;AVGPOST=0.9971;RSQ=0.6174;ERATE=0.0003;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234170761 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1577;AVGPOST=0.9991;RSQ=0.9972;ERATE=0.0004;THETA=0.0004;AC=345;AN=2184 GT:DS:GL:BD 0.15796703 0
1 234170826 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8541;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234170887 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2792;AVGPOST=0.9995;RSQ=0.9990;ERATE=0.0004;THETA=0.0003;AC=611;AN=2184 GT:DS:GL:BD 0.27976191 0
1 234170940 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6530;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234171048 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.666;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5747;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234171051 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0091;AVGPOST=0.9999;RSQ=0.9952;ERATE=0.0003;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234171089 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0113;AVGPOST=0.9993;RSQ=0.9733;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234171222 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.7421;AVGPOST=0.9986;RSQ=0.9970;ERATE=0.0004;THETA=0.0002;AC=1620;AN=2184 GT:DS:GL:BD 0.74175823 1
1 234171371 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0029;AVGPOST=0.9982;RSQ=0.7494;ERATE=0.0005;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234171468 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234171497 . GCT G 86 PASS INDEL;BAVGPOST=1.000;BRSQ=0.782;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5394;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234171547 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5882;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234171579 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5632;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234171651 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.5292;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234171706 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9843;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234171714 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2809;AVGPOST=0.9980;RSQ=0.9961;ERATE=0.0004;THETA=0.0002;AC=613;AN=2184 GT:DS:GL:BD 0.28067765 0
1 234171741 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2468;AVGPOST=0.9980;RSQ=0.9963;ERATE=0.0003;THETA=0.0004;AC=538;AN=2184 GT:DS:GL:BD 0.24633700 0
1 234171759 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234171768 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0053;AVGPOST=0.9994;RSQ=0.9617;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234171789 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0587;AVGPOST=0.9997;RSQ=0.9976;ERATE=0.0003;THETA=0.0003;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 234171948 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9895;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234171954 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5085;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234172008 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.7935;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234172009 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0152;AVGPOST=0.9998;RSQ=0.9944;ERATE=0.0003;THETA=0.0002;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 234172057 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8519;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234172139 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234172161 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1194;AVGPOST=0.9997;RSQ=0.9989;ERATE=0.0003;THETA=0.0003;AC=261;AN=2184 GT:DS:GL:BD 0.11950549 0
1 234172179 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8154;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234172267 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234172410 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0628;AVGPOST=0.9996;RSQ=0.9970;ERATE=0.0004;THETA=0.0002;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 234172529 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234172655 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.922;LDAF=0.0071;AVGPOST=0.9992;RSQ=0.9470;ERATE=0.0004;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234172678 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7510;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234172729 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.632;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6643;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234172777 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234172782 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7905;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234172785 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234172854 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6913;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234172880 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0686;AVGPOST=0.9995;RSQ=0.9965;ERATE=0.0003;THETA=0.0004;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 234172937 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4521;AVGPOST=0.9978;RSQ=0.9970;ERATE=0.0004;THETA=0.0003;AC=985;AN=2184 GT:DS:GL:BD 0.45100734 0
1 234172944 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.7419;AVGPOST=0.9984;RSQ=0.9971;ERATE=0.0004;THETA=0.0003;AC=1620;AN=2184 GT:DS:GL:BD 0.74175823 1
1 234173096 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7605;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234173102 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.2867;AVGPOST=0.9989;RSQ=0.9982;ERATE=0.0004;THETA=0.0002;AC=628;AN=2184 GT:DS:GL:BD 0.28754580 0
1 234173103 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.461;LDAF=0.0027;AVGPOST=0.9974;RSQ=0.6301;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234173229 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234173357 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8468;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234173358 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9241;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234173362 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0043;AVGPOST=0.9989;RSQ=0.8968;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234173532 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0586;AVGPOST=0.9997;RSQ=0.9979;ERATE=0.0003;THETA=0.0005;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 234173598 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1261;AVGPOST=0.9975;RSQ=0.9918;ERATE=0.0005;THETA=0.0003;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 234173699 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.924;LDAF=0.0325;AVGPOST=0.9942;RSQ=0.9328;ERATE=0.0005;THETA=0.0002;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 234173762 . GGTTA G 10256 PASS INDEL;BAVGPOST=0.892;BRSQ=0.784;LDAF=0.2425;AVGPOST=0.9382;RSQ=0.9109;ERATE=0.0027;THETA=0.0002;AC=538;AN=2184 GT:DS:GL:BD 0.24633700 0
1 234173797 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.635;LDAF=0.0056;AVGPOST=0.9945;RSQ=0.5990;ERATE=0.0007;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234173859 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.915;LDAF=0.0212;AVGPOST=0.9908;RSQ=0.8345;ERATE=0.0012;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 234173970 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.985;LDAF=0.1590;AVGPOST=0.9981;RSQ=0.9934;ERATE=0.0005;THETA=0.0002;AC=348;AN=2184 GT:DS:GL:BD 0.15934066 0
1 234174017 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.978;LDAF=0.2837;AVGPOST=0.9883;RSQ=0.9789;ERATE=0.0011;THETA=0.0002;AC=617;AN=2184 GT:DS:GL:BD 0.28250915 0
1 234174029 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.968;LDAF=0.1297;AVGPOST=0.9952;RSQ=0.9845;ERATE=0.0009;THETA=0.0004;AC=280;AN=2184 GT:DS:GL:BD 0.12820514 0
1 234174088 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.930;BRSQ=0.432;LDAF=0.0751;AVGPOST=0.9453;RSQ=0.7247;ERATE=0.0016;THETA=0.0002;AC=162;AN=2184 GT:DS:GL:BD 0.07417583 0
1 234174092 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.934;BRSQ=0.440;LDAF=0.0725;AVGPOST=0.9437;RSQ=0.7011;ERATE=0.0010;THETA=0.0003;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 234174112 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.886;BRSQ=0.289;LDAF=0.0823;AVGPOST=0.9500;RSQ=0.7572;ERATE=0.0016;THETA=0.0001;AC=176;AN=2184 GT:DS:GL:BD 0.08058608 0
1 234174123 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.853;BRSQ=0.746;LDAF=0.6169;AVGPOST=0.8282;RSQ=0.7588;ERATE=0.0123;THETA=0.0004;AC=1409;AN=2184 GT:DS:GL:BD 0.64514655 1
1 234174151 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.857;LDAF=0.0924;AVGPOST=0.9757;RSQ=0.8985;ERATE=0.0006;THETA=0.0007;AC=206;AN=2184 GT:DS:GL:BD 0.09432235 0
1 234174256 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.968;LDAF=0.1262;AVGPOST=0.9920;RSQ=0.9773;ERATE=0.0014;THETA=0.0003;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 234174339 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.966;LDAF=0.1530;AVGPOST=0.9854;RSQ=0.9569;ERATE=0.0081;THETA=0.0002;AC=328;AN=2184 GT:DS:GL:BD 0.15018316 0
1 234174444 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0045;AVGPOST=0.9989;RSQ=0.9152;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234174456 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234174520 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1243;AVGPOST=0.9989;RSQ=0.9958;ERATE=0.0004;THETA=0.0006;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 234174521 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234174526 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234174583 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234174747 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0152;AVGPOST=0.9998;RSQ=0.9944;ERATE=0.0003;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 234174832 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1303;AVGPOST=0.9997;RSQ=0.9992;ERATE=0.0003;THETA=0.0003;AC=285;AN=2184 GT:DS:GL:BD 0.13049451 0
1 234174845 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1078;AVGPOST=0.9998;RSQ=0.9989;ERATE=0.0003;THETA=0.0004;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 234174849 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0027;AVGPOST=0.9993;RSQ=0.8752;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234174954 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7428;AVGPOST=0.9972;RSQ=0.9948;ERATE=0.0004;THETA=0.0003;AC=1621;AN=2184 GT:DS:GL:BD 0.74221611 1
1 234175020 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1303;AVGPOST=0.9997;RSQ=0.9992;ERATE=0.0003;THETA=0.0003;AC=285;AN=2184 GT:DS:GL:BD 0.13049451 0
1 234175031 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234175230 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0033;AVGPOST=0.9980;RSQ=0.7554;ERATE=0.0010;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234175283 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1080;AVGPOST=0.9998;RSQ=0.9992;ERATE=0.0003;THETA=0.0004;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 234175290 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1277;AVGPOST=0.9996;RSQ=0.9989;ERATE=0.0003;THETA=0.0003;AC=279;AN=2184 GT:DS:GL:BD 0.12774725 0
1 234175430 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2543;AVGPOST=0.9987;RSQ=0.9976;ERATE=0.0005;THETA=0.0002;AC=557;AN=2184 GT:DS:GL:BD 0.25503662 0
1 234175476 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0037;AVGPOST=0.9990;RSQ=0.8903;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234175561 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234175742 . TG T 335 PASS INDEL;BAVGPOST=0.772;BRSQ=0.178;LDAF=0.2500;AVGPOST=0.6766;RSQ=0.2589;ERATE=0.0261;THETA=0.0003;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 234176066 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9649;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234176070 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0065;AVGPOST=0.9998;RSQ=0.9842;ERATE=0.0003;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234176105 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0176;AVGPOST=0.9995;RSQ=0.9891;ERATE=0.0003;THETA=0.0002;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 234176110 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0073;AVGPOST=0.9990;RSQ=0.9486;ERATE=0.0004;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234176148 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234176199 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.766;LDAF=0.0027;AVGPOST=0.9989;RSQ=0.8333;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234176284 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8036;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234176533 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9385;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234176544 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6373;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234176560 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0176;AVGPOST=0.9995;RSQ=0.9903;ERATE=0.0003;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 234176602 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6840;AVGPOST=0.9991;RSQ=0.9984;ERATE=0.0004;THETA=0.0002;AC=1493;AN=2184 GT:DS:GL:BD 0.68360806 1
1 234176684 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9987;RSQ=0.9107;ERATE=0.0003;THETA=0.0001;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234176730 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9643;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234176733 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2909;AVGPOST=0.9991;RSQ=0.9985;ERATE=0.0005;THETA=0.0003;AC=636;AN=2184 GT:DS:GL:BD 0.29120880 0
1 234176739 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2905;AVGPOST=0.9996;RSQ=0.9994;ERATE=0.0003;THETA=0.0003;AC=636;AN=2184 GT:DS:GL:BD 0.29120880 0
1 234176772 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0152;AVGPOST=0.9997;RSQ=0.9926;ERATE=0.0003;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 234176776 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.793;LDAF=0.0095;AVGPOST=0.9934;RSQ=0.7562;ERATE=0.0009;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234176784 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8063;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234176928 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9998;RSQ=0.9858;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234176942 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0020;AVGPOST=0.9993;RSQ=0.8528;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234176996 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8063;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234177017 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234177076 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0152;AVGPOST=0.9997;RSQ=0.9904;ERATE=0.0003;THETA=0.0002;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 234177152 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1079;AVGPOST=0.9999;RSQ=0.9994;ERATE=0.0003;THETA=0.0002;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 234177506 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1742;AVGPOST=0.9990;RSQ=0.9980;ERATE=0.0003;THETA=0.0001;AC=380;AN=2184 GT:DS:GL:BD 0.17399268 0
1 234177524 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1607;AVGPOST=0.9992;RSQ=0.9976;ERATE=0.0004;THETA=0.0001;AC=352;AN=2184 GT:DS:GL:BD 0.16117217 0
1 234177584 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234177599 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234177658 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0047;AVGPOST=0.9989;RSQ=0.9200;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234177659 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3957;AVGPOST=0.9985;RSQ=0.9981;ERATE=0.0003;THETA=0.0002;AC=866;AN=2184 GT:DS:GL:BD 0.39652014 0
1 234177664 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.1070;AVGPOST=0.9982;RSQ=0.9938;ERATE=0.0003;THETA=0.0003;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 234177672 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234177749 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5768;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234177936 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7304;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234178160 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2378;AVGPOST=0.9994;RSQ=0.9986;ERATE=0.0004;THETA=0.0004;AC=519;AN=2184 GT:DS:GL:BD 0.23763736 0
1 234178273 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0334;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 234178290 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0073;AVGPOST=0.9991;RSQ=0.9477;ERATE=0.0004;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234178299 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.6773;AVGPOST=0.9941;RSQ=0.9914;ERATE=0.0017;THETA=0.0002;AC=1478;AN=2184 GT:DS:GL:BD 0.67673993 1
1 234178313 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0028;AVGPOST=0.9996;RSQ=0.9325;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234178319 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4876;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234178347 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3960;AVGPOST=0.9991;RSQ=0.9985;ERATE=0.0004;THETA=0.0003;AC=866;AN=2184 GT:DS:GL:BD 0.39652014 0
1 234178454 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7496;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234178489 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3466;AVGPOST=0.9994;RSQ=0.9987;ERATE=0.0003;THETA=0.0004;AC=755;AN=2184 GT:DS:GL:BD 0.34569597 0
1 234178502 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.934;LDAF=0.0190;AVGPOST=0.9982;RSQ=0.9579;ERATE=0.0003;THETA=0.0002;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 234178524 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7425;AVGPOST=0.9989;RSQ=0.9976;ERATE=0.0004;THETA=0.0002;AC=1621;AN=2184 GT:DS:GL:BD 0.74221611 1
1 234178616 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234178618 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.638;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6514;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234178625 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.6287;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234178632 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0024;AVGPOST=0.9995;RSQ=0.9038;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234178660 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1254;AVGPOST=0.9996;RSQ=0.9985;ERATE=0.0003;THETA=0.0003;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 234178710 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0628;AVGPOST=0.9995;RSQ=0.9964;ERATE=0.0003;THETA=0.0006;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 234178722 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1079;AVGPOST=0.9995;RSQ=0.9979;ERATE=0.0003;THETA=0.0003;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 234178743 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234178817 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234178924 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7755;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234179052 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0071;AVGPOST=0.9994;RSQ=0.9636;ERATE=0.0003;THETA=0.0001;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234179075 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7427;AVGPOST=0.9987;RSQ=0.9975;ERATE=0.0003;THETA=0.0005;AC=1621;AN=2184 GT:DS:GL:BD 0.74221611 1
1 234179179 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.3965;AVGPOST=0.9980;RSQ=0.9971;ERATE=0.0004;THETA=0.0004;AC=866;AN=2184 GT:DS:GL:BD 0.39652014 0
1 234179195 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.878;LDAF=0.0201;AVGPOST=0.9986;RSQ=0.9693;ERATE=0.0004;THETA=0.0003;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 234179212 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1103;AVGPOST=0.9989;RSQ=0.9953;ERATE=0.0004;THETA=0.0004;AC=240;AN=2184 GT:DS:GL:BD 0.10989011 0
1 234179256 . CAA C 22 PASS INDEL;BAVGPOST=1.000;BRSQ=0.760;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4561;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234179321 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7423;AVGPOST=0.9968;RSQ=0.9938;ERATE=0.0006;THETA=0.0005;AC=1621;AN=2184 GT:DS:GL:BD 0.74221611 1
1 234179532 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0018;AVGPOST=0.9986;RSQ=0.6886;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234179619 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7144;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234179688 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0687;AVGPOST=0.9998;RSQ=0.9985;ERATE=0.0003;THETA=0.0005;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 234179862 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.980;LDAF=0.0178;AVGPOST=0.9989;RSQ=0.9815;ERATE=0.0003;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 234179991 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0161;AVGPOST=0.9995;RSQ=0.9865;ERATE=0.0003;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 234180297 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0004;AVGPOST=0.9992;RSQ=0.1684;ERATE=0.0004;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 234180327 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5740;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234180365 . A AT 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5142;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234180536 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8939;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234180542 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2921;AVGPOST=0.9973;RSQ=0.9958;ERATE=0.0007;THETA=0.0007;AC=640;AN=2184 GT:DS:GL:BD 0.29304031 0
1 234180668 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0056;AVGPOST=0.9980;RSQ=0.8716;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234180679 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234180786 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1252;AVGPOST=0.9996;RSQ=0.9984;ERATE=0.0003;THETA=0.0004;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 234181021 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.6335;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234181081 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9150;ERATE=0.0003;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234181152 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8962;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234181433 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0083;AVGPOST=0.9999;RSQ=0.9920;ERATE=0.0003;THETA=0.0001;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 234181445 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1608;AVGPOST=0.9989;RSQ=0.9968;ERATE=0.0003;THETA=0.0006;AC=352;AN=2184 GT:DS:GL:BD 0.16117217 0
1 234181469 rs57918903 TA T 1267 PASS INDEL;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0155;AVGPOST=0.9991;RSQ=0.9733;ERATE=0.0004;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 234181497 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234181670 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.755;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5809;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234181687 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0023;AVGPOST=0.9996;RSQ=0.9266;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234181873 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7877;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234181895 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.739;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234181964 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.946;LDAF=0.0247;AVGPOST=0.9991;RSQ=0.9869;ERATE=0.0003;THETA=0.0003;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 234181979 . AT A 32 PASS INDEL;BAVGPOST=1.000;BRSQ=0.724;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4997;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234182184 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.932;LDAF=0.0181;AVGPOST=0.9984;RSQ=0.9704;ERATE=0.0003;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 234182197 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234182213 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1598;AVGPOST=0.9974;RSQ=0.9931;ERATE=0.0006;THETA=0.0002;AC=347;AN=2184 GT:DS:GL:BD 0.15888278 0
1 234182259 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1095;AVGPOST=0.9966;RSQ=0.9861;ERATE=0.0005;THETA=0.0005;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 234182305 . CTTTG C 192 PASS INDEL;BAVGPOST=0.999;BRSQ=0.778;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7810;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234182362 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.6349;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234182415 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.734;LDAF=0.0017;AVGPOST=0.9978;RSQ=0.5405;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234182430 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.983;LDAF=0.0364;AVGPOST=0.9982;RSQ=0.9808;ERATE=0.0005;THETA=0.0006;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 234182815 . G GT 36 PASS INDEL;BAVGPOST=1.000;BRSQ=0.756;LDAF=0.0024;AVGPOST=0.9962;RSQ=0.4232;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234182854 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0049;AVGPOST=0.9969;RSQ=0.7582;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234182918 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6555;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234182979 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0929;AVGPOST=0.9978;RSQ=0.9932;ERATE=0.0003;THETA=0.0003;AC=201;AN=2184 GT:DS:GL:BD 0.09203297 0
1 234182988 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0335;AVGPOST=0.9998;RSQ=0.9974;ERATE=0.0003;THETA=0.0005;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 234183129 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0445;AVGPOST=0.9995;RSQ=0.9945;ERATE=0.0003;THETA=0.0004;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 234183223 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0083;AVGPOST=0.9989;RSQ=0.9553;ERATE=0.0003;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 234183249 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0062;AVGPOST=0.9988;RSQ=0.9274;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234183250 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0062;AVGPOST=0.9988;RSQ=0.9247;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234183426 . TAC T 71 PASS INDEL;BAVGPOST=0.990;BRSQ=0.643;LDAF=0.0203;AVGPOST=0.9782;RSQ=0.5601;ERATE=0.0098;THETA=0.0002;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 234183444 rs5781776 TAC T 26764 PASS INDEL;BAVGPOST=0.984;BRSQ=0.967;LDAF=0.2695;AVGPOST=0.9597;RSQ=0.9330;ERATE=0.0166;THETA=0.0001;AC=571;AN=2184 GT:DS:GL:BD 0.26144689 0
1 234183468 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234183513 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0022;AVGPOST=0.9999;RSQ=0.9736;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234183575 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1630;AVGPOST=0.9997;RSQ=0.9990;ERATE=0.0003;THETA=0.0004;AC=357;AN=2184 GT:DS:GL:BD 0.16346154 0
1 234183648 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9858;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234183681 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0920;AVGPOST=0.9998;RSQ=0.9992;ERATE=0.0003;THETA=0.0003;AC=201;AN=2184 GT:DS:GL:BD 0.09203297 0
1 234183692 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234183709 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.2394;AVGPOST=0.9952;RSQ=0.9911;ERATE=0.0006;THETA=0.0004;AC=520;AN=2184 GT:DS:GL:BD 0.23809524 0
1 234183780 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.922;LDAF=0.9885;AVGPOST=0.9996;RSQ=0.9846;ERATE=0.0003;THETA=0.0003;AC=2159;AN=2184 GT:DS:GL:BD 0.98855311 1
1 234183915 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0920;AVGPOST=0.9996;RSQ=0.9983;ERATE=0.0003;THETA=0.0004;AC=201;AN=2184 GT:DS:GL:BD 0.09203297 0
1 234183921 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0066;AVGPOST=0.9996;RSQ=0.9711;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234183957 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234184053 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1615;AVGPOST=0.9985;RSQ=0.9955;ERATE=0.0004;THETA=0.0005;AC=352;AN=2184 GT:DS:GL:BD 0.16117217 0
1 234184153 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9063;ERATE=0.0007;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234184326 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9035;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234184440 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0588;AVGPOST=0.9989;RSQ=0.9921;ERATE=0.0004;THETA=0.0004;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 234184491 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7423;AVGPOST=0.9969;RSQ=0.9937;ERATE=0.0006;THETA=0.0002;AC=1621;AN=2184 GT:DS:GL:BD 0.74221611 1
1 234184494 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.979;LDAF=0.0356;AVGPOST=0.9997;RSQ=0.9967;ERATE=0.0003;THETA=0.0004;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 234184643 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7605;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234184679 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234184712 . ACTTGT A 1715 PASS INDEL;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0100;AVGPOST=0.9988;RSQ=0.9512;ERATE=0.0003;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 234184754 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8559;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234184788 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7280;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234184795 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0674;AVGPOST=0.9983;RSQ=0.9902;ERATE=0.0003;THETA=0.0008;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 234184808 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0055;AVGPOST=0.9981;RSQ=0.8841;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234184826 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234184960 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234184965 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234184986 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234185033 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9365;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234185048 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8470;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234185148 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234185155 . T TGC 394 PASS INDEL;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0048;AVGPOST=0.9975;RSQ=0.8042;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234185198 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8625;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234185214 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8628;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234185319 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2863;AVGPOST=0.9977;RSQ=0.9955;ERATE=0.0003;THETA=0.0009;AC=623;AN=2184 GT:DS:GL:BD 0.28525642 0
1 234185536 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.955;LDAF=0.0193;AVGPOST=0.9980;RSQ=0.9602;ERATE=0.0004;THETA=0.0006;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 234185645 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234185723 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0032;AVGPOST=0.9986;RSQ=0.8016;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234185876 . T TA 1025 PASS INDEL;BAVGPOST=0.991;BRSQ=0.789;LDAF=0.0205;AVGPOST=0.9946;RSQ=0.8950;ERATE=0.0007;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 234185911 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0160;AVGPOST=0.9988;RSQ=0.9692;ERATE=0.0003;THETA=0.0007;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 234186361 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.726;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.7515;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234186387 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.516;LDAF=0.0025;AVGPOST=0.9963;RSQ=0.4845;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234186462 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5763;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234186519 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0031;AVGPOST=0.9983;RSQ=0.7793;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234186661 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0022;AVGPOST=0.9975;RSQ=0.6072;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234186689 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0149;AVGPOST=0.9991;RSQ=0.9739;ERATE=0.0004;THETA=0.0006;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 234186697 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.778;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.7951;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234186816 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0033;AVGPOST=0.9980;RSQ=0.7223;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234187045 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9340;ERATE=0.0004;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234187187 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0350;AVGPOST=0.9967;RSQ=0.9616;ERATE=0.0008;THETA=0.0005;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 234187195 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0067;AVGPOST=0.9979;RSQ=0.8601;ERATE=0.0006;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234187283 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.763;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234187344 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0064;AVGPOST=0.9993;RSQ=0.9483;ERATE=0.0004;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234187356 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0691;AVGPOST=0.9991;RSQ=0.9942;ERATE=0.0003;THETA=0.0004;AC=151;AN=2184 GT:DS:GL:BD 0.06913920 0
1 234187391 . TG T 101 PASS INDEL;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0029;AVGPOST=0.9972;RSQ=0.6526;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234187421 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.629;LDAF=0.0063;AVGPOST=0.9937;RSQ=0.6253;ERATE=0.0006;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234187555 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0154;AVGPOST=0.9993;RSQ=0.9798;ERATE=0.0004;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 234187566 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234187574 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234187589 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.5665;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234187591 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234187603 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0684;AVGPOST=0.9993;RSQ=0.9962;ERATE=0.0003;THETA=0.0002;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 234187668 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5348;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234187685 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6199;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234187686 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0071;AVGPOST=0.9989;RSQ=0.9391;ERATE=0.0004;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234187690 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7895;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234187746 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.937;LDAF=0.1233;AVGPOST=0.9964;RSQ=0.9860;ERATE=0.0007;THETA=0.0002;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 234187754 . T TA 94 PASS INDEL;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0024;AVGPOST=0.9980;RSQ=0.6763;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234187757 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.722;LDAF=0.0020;AVGPOST=0.9977;RSQ=0.5932;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234187816 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0154;AVGPOST=0.9994;RSQ=0.9812;ERATE=0.0003;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 234187965 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0036;AVGPOST=0.9984;RSQ=0.7928;ERATE=0.0005;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234188010 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0056;AVGPOST=0.9976;RSQ=0.8487;ERATE=0.0004;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234188063 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.773;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234188089 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.742;LDAF=0.9962;AVGPOST=0.9979;RSQ=0.7548;ERATE=0.0004;THETA=0.0003;AC=2178;AN=2184 GT:DS:GL:BD 0.99725276 1
1 234188184 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1609;AVGPOST=0.9974;RSQ=0.9917;ERATE=0.0005;THETA=0.0004;AC=352;AN=2184 GT:DS:GL:BD 0.16117217 0
1 234188189 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0091;AVGPOST=0.9982;RSQ=0.9128;ERATE=0.0004;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 234188237 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0665;AVGPOST=0.9992;RSQ=0.9953;ERATE=0.0003;THETA=0.0012;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 234188310 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6362;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234188319 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234188362 . G GT 482 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9165;ERATE=0.0004;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234188433 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0037;AVGPOST=0.9978;RSQ=0.7426;ERATE=0.0005;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234188470 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1588;AVGPOST=0.9984;RSQ=0.9951;ERATE=0.0004;THETA=0.0006;AC=347;AN=2184 GT:DS:GL:BD 0.15888278 0
1 234188718 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0086;AVGPOST=0.9993;RSQ=0.9594;ERATE=0.0003;THETA=0.0001;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 234188758 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.929;LDAF=0.0575;AVGPOST=0.9907;RSQ=0.9381;ERATE=0.0007;THETA=0.0003;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 234188873 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0578;AVGPOST=0.9992;RSQ=0.9941;ERATE=0.0003;THETA=0.0003;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 234188888 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.685;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4332;ERATE=0.0007;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234188925 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.486;LDAF=0.0217;AVGPOST=0.9731;RSQ=0.5104;ERATE=0.0074;THETA=0.0002;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 234188948 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.654;LDAF=0.0188;AVGPOST=0.9931;RSQ=0.8491;ERATE=0.0010;THETA=0.0007;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 234188968 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.784;LDAF=0.0073;AVGPOST=0.9973;RSQ=0.8581;ERATE=0.0004;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234189102 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0152;AVGPOST=0.9997;RSQ=0.9903;ERATE=0.0003;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 234189136 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0042;AVGPOST=0.9996;RSQ=0.9539;ERATE=0.0004;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234189158 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.940;LDAF=0.0550;AVGPOST=0.9951;RSQ=0.9680;ERATE=0.0003;THETA=0.0004;AC=123;AN=2184 GT:DS:GL:BD 0.05631868 0
1 234189261 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.961;LDAF=0.0372;AVGPOST=0.9906;RSQ=0.9080;ERATE=0.0003;THETA=0.0003;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 234189283 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.983;LDAF=0.2456;AVGPOST=0.9949;RSQ=0.9900;ERATE=0.0003;THETA=0.0004;AC=536;AN=2184 GT:DS:GL:BD 0.24542125 0
1 234189803 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0019;AVGPOST=0.9976;RSQ=0.5029;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234189839 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6671;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234189883 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0090;AVGPOST=0.9993;RSQ=0.9666;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234189970 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1579;AVGPOST=0.9981;RSQ=0.9938;ERATE=0.0006;THETA=0.0004;AC=345;AN=2184 GT:DS:GL:BD 0.15796703 0
1 234189988 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9485;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234189991 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.755;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6335;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234190011 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.6673;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234190032 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234190178 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234190196 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0588;AVGPOST=0.9973;RSQ=0.9855;ERATE=0.0004;THETA=0.0005;AC=129;AN=2184 GT:DS:GL:BD 0.05906593 0
1 234190199 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8329;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234190258 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4915;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234190308 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0054;AVGPOST=0.9996;RSQ=0.9720;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234190353 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7841;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234190394 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9691;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234190442 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0062;AVGPOST=0.9995;RSQ=0.9617;ERATE=0.0004;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234190463 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.8986;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234190629 . G GGTCT 359 PASS INDEL;BAVGPOST=1.000;BRSQ=0.762;LDAF=0.0034;AVGPOST=0.9960;RSQ=0.5272;ERATE=0.0009;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234190639 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.739;LDAF=0.0017;AVGPOST=0.9981;RSQ=0.5418;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234190686 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0019;AVGPOST=0.9977;RSQ=0.5173;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234190693 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6200;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234190719 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6294;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234190772 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.7386;AVGPOST=0.9897;RSQ=0.9804;ERATE=0.0011;THETA=0.0005;AC=1619;AN=2184 GT:DS:GL:BD 0.74130034 1
1 234190891 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0029;AVGPOST=0.9983;RSQ=0.7877;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234191052 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0024;AVGPOST=0.9973;RSQ=0.5479;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234191154 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1081;AVGPOST=0.9990;RSQ=0.9956;ERATE=0.0003;THETA=0.0007;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 234191255 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0037;AVGPOST=0.9988;RSQ=0.8746;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234191259 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234191272 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234191303 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.5595;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234191351 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0017;AVGPOST=0.9973;RSQ=0.3330;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234191445 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0034;AVGPOST=0.9968;RSQ=0.6023;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234191477 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.742;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5776;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234191478 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.696;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7384;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234191488 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.779;LDAF=0.0074;AVGPOST=0.9974;RSQ=0.8593;ERATE=0.0004;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234191490 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.714;LDAF=0.0037;AVGPOST=0.9957;RSQ=0.5826;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234191567 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0449;AVGPOST=0.9980;RSQ=0.9840;ERATE=0.0003;THETA=0.0004;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 234191661 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9385;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234191738 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.898;LDAF=0.0150;AVGPOST=0.9959;RSQ=0.8851;ERATE=0.0003;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 234191745 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9545;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234191766 . G GT 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0029;AVGPOST=0.9965;RSQ=0.5285;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234191777 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0026;AVGPOST=0.9992;RSQ=0.8684;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234191898 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234191988 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0028;AVGPOST=0.9988;RSQ=0.8362;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234192003 . GAT G 5451 PASS INDEL;BAVGPOST=0.954;BRSQ=0.893;LDAF=0.2533;AVGPOST=0.9552;RSQ=0.9210;ERATE=0.0022;THETA=0.0006;AC=568;AN=2184 GT:DS:GL:BD 0.26007327 0
1 234192005 . TATA T 37120 PASS INDEL;BAVGPOST=0.975;BRSQ=0.945;LDAF=0.2698;AVGPOST=0.9761;RSQ=0.9609;ERATE=0.0012;THETA=0.0002;AC=594;AN=2184 GT:DS:GL:BD 0.27197802 0
1 234192009 rs79437702 ATAT A 10673 PASS INDEL;BAVGPOST=0.974;BRSQ=0.943;LDAF=0.2674;AVGPOST=0.9780;RSQ=0.9629;ERATE=0.0007;THETA=0.0004;AC=591;AN=2184 GT:DS:GL:BD 0.27060440 0
1 234192010 . TATTA T 159 PASS INDEL;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0039;AVGPOST=0.9966;RSQ=0.6555;ERATE=0.0006;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234192102 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0690;AVGPOST=0.9989;RSQ=0.9934;ERATE=0.0003;THETA=0.0002;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 234192178 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6077;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234192205 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0026;AVGPOST=0.9982;RSQ=0.6962;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234192214 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234192276 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7270;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234192281 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6674;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234192311 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234192664 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0034;AVGPOST=0.9981;RSQ=0.7565;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234192684 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.755;LDAF=0.0039;AVGPOST=0.9991;RSQ=0.8995;ERATE=0.0003;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234192686 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2813;AVGPOST=0.9990;RSQ=0.9981;ERATE=0.0004;THETA=0.0005;AC=613;AN=2184 GT:DS:GL:BD 0.28067765 0
1 234192748 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0061;AVGPOST=0.9988;RSQ=0.9241;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234192904 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6616;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234192993 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9998;RSQ=0.9822;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234193014 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.2812;AVGPOST=0.9971;RSQ=0.9948;ERATE=0.0006;THETA=0.0003;AC=613;AN=2184 GT:DS:GL:BD 0.28067765 0
1 234193098 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234193219 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.807;LDAF=0.0026;AVGPOST=0.9990;RSQ=0.8382;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234193442 . GC G 11 PASS INDEL;BAVGPOST=0.999;BRSQ=0.582;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5536;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234193454 . GTCTT G 8380 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0586;AVGPOST=0.9994;RSQ=0.9955;ERATE=0.0003;THETA=0.0007;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 234193568 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234193627 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2485;AVGPOST=0.9944;RSQ=0.9906;ERATE=0.0008;THETA=0.0002;AC=545;AN=2184 GT:DS:GL:BD 0.24954212 0
1 234193700 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.726;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6603;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234193749 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8824;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234193884 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6555;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234193916 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.980;LDAF=0.1569;AVGPOST=0.9979;RSQ=0.9934;ERATE=0.0005;THETA=0.0006;AC=345;AN=2184 GT:DS:GL:BD 0.15796703 0
1 234193937 . G GT 34 PASS INDEL;BAVGPOST=0.989;BRSQ=0.461;LDAF=0.0174;AVGPOST=0.9818;RSQ=0.5879;ERATE=0.0038;THETA=0.0002;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 234193946 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0157;AVGPOST=0.9996;RSQ=0.9881;ERATE=0.0003;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 234193947 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.792;LDAF=0.0069;AVGPOST=0.9967;RSQ=0.8128;ERATE=0.0004;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234194074 rs56960667 A AT 2710 PASS INDEL;BAVGPOST=0.611;BRSQ=0.187;LDAF=0.6939;AVGPOST=0.7435;RSQ=0.5040;ERATE=0.0133;THETA=0.0004;AC=1614;AN=2184 GT:DS:GL:BD 0.73901099 1
1 234194156 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0102;AVGPOST=0.9985;RSQ=0.9409;ERATE=0.0004;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 234194176 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234194196 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0588;AVGPOST=0.9992;RSQ=0.9941;ERATE=0.0005;THETA=0.0003;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 234194247 . TGCTCA T 1363 PASS INDEL;BAVGPOST=0.998;BRSQ=0.898;LDAF=0.0086;AVGPOST=0.9969;RSQ=0.8469;ERATE=0.0004;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234194306 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1079;AVGPOST=0.9989;RSQ=0.9949;ERATE=0.0004;THETA=0.0003;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 234194360 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234194369 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6962;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234194394 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0335;AVGPOST=0.9995;RSQ=0.9932;ERATE=0.0003;THETA=0.0003;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 234194410 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.7570;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234194420 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234194454 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6784;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234194514 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6523;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234194547 . T TG 1364 PASS INDEL;BAVGPOST=0.992;BRSQ=0.774;LDAF=0.0194;AVGPOST=0.9978;RSQ=0.9553;ERATE=0.0005;THETA=0.0004;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 234194550 . G GT 804 PASS INDEL;BAVGPOST=0.995;BRSQ=0.915;LDAF=0.0271;AVGPOST=0.9905;RSQ=0.8721;ERATE=0.0019;THETA=0.0003;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 234194591 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1080;AVGPOST=0.9991;RSQ=0.9961;ERATE=0.0003;THETA=0.0003;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 234194667 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7527;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234194685 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0030;AVGPOST=0.9990;RSQ=0.8528;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234194728 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6555;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234194876 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0044;AVGPOST=0.9981;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234194918 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.816;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8575;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234194919 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4876;AVGPOST=0.9977;RSQ=0.9962;ERATE=0.0008;THETA=0.0003;AC=1063;AN=2184 GT:DS:GL:BD 0.48672161 0
1 234194979 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0049;AVGPOST=0.9956;RSQ=0.6871;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234195145 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0587;AVGPOST=0.9994;RSQ=0.9955;ERATE=0.0003;THETA=0.0006;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 234195173 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5030;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234195237 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8292;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234195325 . ATAGAGC A 8607 PASS INDEL;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0644;AVGPOST=0.9947;RSQ=0.9681;ERATE=0.0011;THETA=0.0006;AC=138;AN=2184 GT:DS:GL:BD 0.06318682 0
1 234195379 . CA C 1326 PASS INDEL;BAVGPOST=0.982;BRSQ=0.813;LDAF=0.0616;AVGPOST=0.9625;RSQ=0.7412;ERATE=0.0102;THETA=0.0003;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 234195409 rs55790666 CAT C 1206 PASS INDEL;BAVGPOST=0.983;BRSQ=0.787;LDAF=0.0577;AVGPOST=0.9580;RSQ=0.6819;ERATE=0.0136;THETA=0.0005;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 234195558 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9432;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234195581 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6723;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234195604 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234195669 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0043;AVGPOST=0.9968;RSQ=0.6908;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234195760 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7511;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234195800 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0051;AVGPOST=0.9974;RSQ=0.8041;ERATE=0.0006;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234195895 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234196021 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0585;AVGPOST=0.9995;RSQ=0.9966;ERATE=0.0003;THETA=0.0003;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 234196188 . GTATT G 61 PASS INDEL;BAVGPOST=0.996;BRSQ=0.702;LDAF=0.0112;AVGPOST=0.9880;RSQ=0.5373;ERATE=0.0037;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234196192 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0032;AVGPOST=0.9984;RSQ=0.8072;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234196217 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0342;AVGPOST=0.9982;RSQ=0.9817;ERATE=0.0003;THETA=0.0002;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 234196406 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6077;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234196567 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9641;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234196581 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0115;AVGPOST=0.9998;RSQ=0.9919;ERATE=0.0003;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 234196599 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234196731 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0668;AVGPOST=0.9996;RSQ=0.9975;ERATE=0.0003;THETA=0.0007;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 234196807 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6850;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234196810 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1079;AVGPOST=0.9995;RSQ=0.9976;ERATE=0.0003;THETA=0.0005;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 234196884 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.984;LDAF=0.2446;AVGPOST=0.9955;RSQ=0.9916;ERATE=0.0004;THETA=0.0002;AC=536;AN=2184 GT:DS:GL:BD 0.24542125 0
1 234196971 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.836;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8000;ERATE=0.0005;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234196972 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7408;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234197045 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.7565;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234197075 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9995;RSQ=0.9049;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234197115 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0057;AVGPOST=0.9994;RSQ=0.9502;ERATE=0.0004;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234197123 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8832;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234197169 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5222;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234197255 . GA G 877 PASS INDEL;BAVGPOST=0.733;BRSQ=0.554;LDAF=0.3176;AVGPOST=0.7920;RSQ=0.6682;ERATE=0.0201;THETA=0.0003;AC=664;AN=2184 GT:DS:GL:BD 0.30402932 0
1 234197288 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.607;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.5973;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234197508 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.981;LDAF=0.1577;AVGPOST=0.9979;RSQ=0.9932;ERATE=0.0004;THETA=0.0002;AC=345;AN=2184 GT:DS:GL:BD 0.15796703 0
1 234197542 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234197572 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0023;AVGPOST=0.9998;RSQ=0.9626;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234197579 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9335;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234197612 rs60286451 ATCTTTATCTTT A 3763 PASS INDEL;BAVGPOST=0.996;BRSQ=0.866;LDAF=0.0140;AVGPOST=0.9978;RSQ=0.9358;ERATE=0.0003;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 234197642 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.918;LDAF=0.0176;AVGPOST=0.9955;RSQ=0.9069;ERATE=0.0003;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 234197810 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234197908 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9356;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234198042 . CAGT C 218 PASS INDEL;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6373;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234198111 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9989;RSQ=0.9216;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234198182 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.644;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234198222 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5796;AVGPOST=0.9983;RSQ=0.9971;ERATE=0.0003;THETA=0.0003;AC=1264;AN=2184 GT:DS:GL:BD 0.57875460 1
1 234198308 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.787;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7478;ERATE=0.0009;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234198316 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5287;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234198423 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0031;AVGPOST=0.9974;RSQ=0.7007;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234198512 . GC G 77 PASS INDEL;BAVGPOST=1.000;BRSQ=0.731;LDAF=0.0047;AVGPOST=0.9944;RSQ=0.5280;ERATE=0.0007;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234198589 . AATTTTTT A 127 PASS INDEL;BAVGPOST=0.994;BRSQ=0.526;LDAF=0.0123;AVGPOST=0.9911;RSQ=0.7286;ERATE=0.0006;THETA=0.0002;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 234198637 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0196;AVGPOST=0.9944;RSQ=0.9109;ERATE=0.0003;THETA=0.0010;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 234198645 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0335;AVGPOST=0.9995;RSQ=0.9936;ERATE=0.0004;THETA=0.0005;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 234198748 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.742;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6675;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234198873 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7525;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234198892 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4782;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234198927 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.625;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7661;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234198965 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1587;AVGPOST=0.9991;RSQ=0.9970;ERATE=0.0003;THETA=0.0014;AC=347;AN=2184 GT:DS:GL:BD 0.15888278 0
1 234199125 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.847;LDAF=0.0076;AVGPOST=0.9984;RSQ=0.9134;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234199128 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.598;LDAF=0.0027;AVGPOST=0.9961;RSQ=0.4617;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234199261 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0033;AVGPOST=0.9993;RSQ=0.9052;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234199266 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0448;AVGPOST=0.9987;RSQ=0.9885;ERATE=0.0003;THETA=0.0008;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 234199315 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5417;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234199511 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0027;AVGPOST=0.9983;RSQ=0.8071;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234199738 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1252;AVGPOST=0.9996;RSQ=0.9985;ERATE=0.0003;THETA=0.0002;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 234199761 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0066;AVGPOST=0.9994;RSQ=0.9697;ERATE=0.0003;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234199830 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.755;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7052;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234199843 . A AT 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5058;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234199845 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0029;AVGPOST=0.9988;RSQ=0.8563;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234199861 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8097;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234199865 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8126;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234199957 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6854;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234199982 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9696;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234200081 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4947;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234200085 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0076;AVGPOST=0.9995;RSQ=0.9695;ERATE=0.0005;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234200118 . CT C 71 PASS INDEL;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5296;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234200220 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8182;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234200311 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0177;AVGPOST=0.9986;RSQ=0.9698;ERATE=0.0003;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 234200399 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.923;LDAF=0.0290;AVGPOST=0.9969;RSQ=0.9569;ERATE=0.0004;THETA=0.0006;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 234200475 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234200605 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0079;AVGPOST=0.9992;RSQ=0.9671;ERATE=0.0003;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 234200645 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234200698 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234200717 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234200721 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9233;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234200767 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.877;LDAF=0.0146;AVGPOST=0.9980;RSQ=0.9504;ERATE=0.0004;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 234200962 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.497;LDAF=0.0028;AVGPOST=0.9986;RSQ=0.7735;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234201024 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.688;LDAF=0.0036;AVGPOST=0.9972;RSQ=0.6664;ERATE=0.0006;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234201028 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.5352;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234201053 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.978;LDAF=0.2465;AVGPOST=0.9831;RSQ=0.9697;ERATE=0.0022;THETA=0.0067;AC=535;AN=2184 GT:DS:GL:BD 0.24496336 0
1 234201054 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.978;LDAF=0.0353;AVGPOST=0.9987;RSQ=0.9871;ERATE=0.0003;THETA=0.0007;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 234201055 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.621;LDAF=0.0019;AVGPOST=0.9977;RSQ=0.5650;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234201143 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0105;AVGPOST=0.9984;RSQ=0.9296;ERATE=0.0007;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234201155 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0211;AVGPOST=0.9957;RSQ=0.9292;ERATE=0.0005;THETA=0.0007;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 234201185 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1271;AVGPOST=0.9980;RSQ=0.9922;ERATE=0.0007;THETA=0.0004;AC=276;AN=2184 GT:DS:GL:BD 0.12637363 0
1 234201327 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234201364 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234201409 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9654;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234201452 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6191;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234201676 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.813;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9289;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234201683 . TGTC T 28 PASS INDEL;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5374;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234201700 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.1085;AVGPOST=0.9992;RSQ=0.9966;ERATE=0.0003;THETA=0.0003;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 234201843 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8962;ERATE=0.0003;THETA=0.0020;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234201948 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.863;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7952;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234202007 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234202027 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1247;AVGPOST=0.9990;RSQ=0.9963;ERATE=0.0003;THETA=0.0053;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 234202037 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234202043 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.8974;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234202145 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.2350;AVGPOST=0.9966;RSQ=0.9934;ERATE=0.0006;THETA=0.0005;AC=511;AN=2184 GT:DS:GL:BD 0.23397435 0
1 234202266 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9277;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234202378 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.950;LDAF=0.0060;AVGPOST=0.9987;RSQ=0.9162;ERATE=0.0003;THETA=0.0011;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234202400 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1094;AVGPOST=0.9973;RSQ=0.9904;ERATE=0.0004;THETA=0.0004;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 234202500 . CCT C 21961 PASS INDEL;BAVGPOST=0.970;BRSQ=0.422;LDAF=0.9485;AVGPOST=0.9318;RSQ=0.4450;ERATE=0.0135;THETA=0.0008;AC=2119;AN=2184 GT:DS:GL:BD 0.97023809 1
1 234202553 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0662;AVGPOST=0.9977;RSQ=0.9866;ERATE=0.0005;THETA=0.0005;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 234202603 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.829;LDAF=0.0057;AVGPOST=0.9987;RSQ=0.9127;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234202713 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.673;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234202763 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7129;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234202765 . TATA T 48 PASS INDEL;BAVGPOST=0.982;BRSQ=0.047;LDAF=0.0224;AVGPOST=0.9662;RSQ=0.4143;ERATE=0.0011;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 234202903 rs71574898 A AT 8711 PASS INDEL;BAVGPOST=0.992;BRSQ=0.968;LDAF=0.1165;AVGPOST=0.9829;RSQ=0.9408;ERATE=0.0032;THETA=0.0005;AC=242;AN=2184 GT:DS:GL:BD 0.11080586 0
1 234202906 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9335;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234202957 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.885;LDAF=0.0211;AVGPOST=0.9956;RSQ=0.9226;ERATE=0.0003;THETA=0.0005;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 234203005 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0620;AVGPOST=0.9985;RSQ=0.9910;ERATE=0.0003;THETA=0.0009;AC=136;AN=2184 GT:DS:GL:BD 0.06227106 0
1 234203025 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.0638;AVGPOST=0.9980;RSQ=0.9882;ERATE=0.0004;THETA=0.0002;AC=138;AN=2184 GT:DS:GL:BD 0.06318682 0
1 234203085 . T TA 261 PASS INDEL;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0029;AVGPOST=0.9990;RSQ=0.8842;ERATE=0.0005;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234203155 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2699;AVGPOST=0.9988;RSQ=0.9978;ERATE=0.0003;THETA=0.0004;AC=589;AN=2184 GT:DS:GL:BD 0.26968864 0
1 234203172 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=1.0000;RSQ=0.9947;ERATE=0.0003;THETA=0.0019;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234203222 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8938;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234203225 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234203556 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.756;LDAF=0.9988;AVGPOST=0.9991;RSQ=0.7180;ERATE=0.0003;THETA=0.0009;AC=2182;AN=2184 GT:DS:GL:BD 0.99908423 1
1 234203567 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9845;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234203618 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1251;AVGPOST=0.9992;RSQ=0.9971;ERATE=0.0003;THETA=0.0006;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 234203729 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8388;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234203826 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234203975 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.722;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6072;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234204000 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234204030 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8648;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234204153 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6592;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234204180 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0245;AVGPOST=0.9986;RSQ=0.9802;ERATE=0.0003;THETA=0.0008;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 234204359 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0065;AVGPOST=0.9978;RSQ=0.8619;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234204379 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0042;AVGPOST=0.9996;RSQ=0.9589;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234204380 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0045;AVGPOST=0.9977;RSQ=0.7812;ERATE=0.0008;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234204468 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.5726;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234204561 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.992;LDAF=0.5825;AVGPOST=0.9821;RSQ=0.9729;ERATE=0.0018;THETA=0.0002;AC=1275;AN=2184 GT:DS:GL:BD 0.58379120 1
1 234204599 . ATATG A 231 PASS INDEL;BAVGPOST=0.789;BRSQ=0.146;LDAF=0.2217;AVGPOST=0.6972;RSQ=0.2778;ERATE=0.0243;THETA=0.0002;AC=227;AN=2184 GT:DS:GL:BD 0.10393773 0
1 234204612 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.246;LDAF=0.0330;AVGPOST=0.9706;RSQ=0.6827;ERATE=0.0011;THETA=0.0006;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 234204624 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.721;BRSQ=0.541;LDAF=0.4990;AVGPOST=0.8702;RSQ=0.8173;ERATE=0.0092;THETA=0.0003;AC=1107;AN=2184 GT:DS:GL:BD 0.50686812 1
1 234204632 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.965;BRSQ=0.140;LDAF=0.0406;AVGPOST=0.9540;RSQ=0.5523;ERATE=0.0023;THETA=0.0003;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 234204691 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.901;BRSQ=0.066;LDAF=0.0528;AVGPOST=0.9329;RSQ=0.4700;ERATE=0.0023;THETA=0.0004;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 234204699 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.858;BRSQ=0.058;LDAF=0.2150;AVGPOST=0.6802;RSQ=0.2219;ERATE=0.0272;THETA=0.0008;AC=181;AN=2184 GT:DS:GL:BD 0.08287546 0
1 234204731 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.459;BRSQ=0.102;LDAF=0.5471;AVGPOST=0.6958;RSQ=0.5228;ERATE=0.0144;THETA=0.0006;AC=1212;AN=2184 GT:DS:GL:BD 0.55494505 1
1 234204789 . T TTAC 227 PASS INDEL;BAVGPOST=0.831;BRSQ=0.034;LDAF=0.1774;AVGPOST=0.7338;RSQ=0.2561;ERATE=0.0159;THETA=0.0003;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 234204797 . AAT A 37 PASS INDEL;BAVGPOST=0.886;BRSQ=0.019;LDAF=0.1717;AVGPOST=0.7280;RSQ=0.2185;ERATE=0.0182;THETA=0.0007;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 234204825 . A AAT 1717 PASS INDEL;BAVGPOST=0.665;BRSQ=0.377;LDAF=0.5685;AVGPOST=0.8012;RSQ=0.6857;ERATE=0.0136;THETA=0.0005;AC=1251;AN=2184 GT:DS:GL:BD 0.57280219 1
1 234204835 . A AT 580 PASS INDEL;BAVGPOST=0.776;BRSQ=0.561;LDAF=0.5421;AVGPOST=0.7016;RSQ=0.5181;ERATE=0.0176;THETA=0.0003;AC=1195;AN=2184 GT:DS:GL:BD 0.54716116 1
1 234204882 . AATAT A 90 PASS INDEL;BAVGPOST=0.916;BRSQ=0.071;LDAF=0.0972;AVGPOST=0.8502;RSQ=0.3300;ERATE=0.0078;THETA=0.0005;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 234204884 . TATATA T 470 PASS INDEL;BAVGPOST=0.922;BRSQ=0.082;LDAF=0.1108;AVGPOST=0.8321;RSQ=0.3452;ERATE=0.0058;THETA=0.0006;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 234204889 . AATAT A 159 PASS INDEL;BAVGPOST=0.934;BRSQ=0.092;LDAF=0.1112;AVGPOST=0.8319;RSQ=0.3420;ERATE=0.0051;THETA=0.0005;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 234204892 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.856;BRSQ=0.707;LDAF=0.5052;AVGPOST=0.6847;RSQ=0.4866;ERATE=0.0318;THETA=0.0004;AC=1123;AN=2184 GT:DS:GL:BD 0.51419413 1
1 234205002 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.962;BRSQ=0.429;LDAF=0.0602;AVGPOST=0.9358;RSQ=0.5656;ERATE=0.0049;THETA=0.0008;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 234205026 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.951;BRSQ=0.887;LDAF=0.2430;AVGPOST=0.9753;RSQ=0.9533;ERATE=0.0014;THETA=0.0005;AC=534;AN=2184 GT:DS:GL:BD 0.24450549 0
1 234205191 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.744;LDAF=0.0038;AVGPOST=0.9971;RSQ=0.6876;ERATE=0.0006;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234205277 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.644;LDAF=0.0046;AVGPOST=0.9953;RSQ=0.5861;ERATE=0.0005;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234205297 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.970;LDAF=0.0171;AVGPOST=0.9995;RSQ=0.9851;ERATE=0.0004;THETA=0.0002;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 234205338 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7189;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234205379 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.970;LDAF=0.1758;AVGPOST=0.9968;RSQ=0.9911;ERATE=0.0004;THETA=0.0004;AC=385;AN=2184 GT:DS:GL:BD 0.17628205 0
1 234205662 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.987;LDAF=0.8279;AVGPOST=0.9988;RSQ=0.9961;ERATE=0.0003;THETA=0.0004;AC=1808;AN=2184 GT:DS:GL:BD 0.82783884 1
1 234205749 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.5809;AVGPOST=0.9969;RSQ=0.9949;ERATE=0.0007;THETA=0.0008;AC=1267;AN=2184 GT:DS:GL:BD 0.58012819 1
1 234205775 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234205817 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234205857 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6777;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234205985 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.714;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0004;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234206103 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8704;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234206164 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.928;LDAF=0.0144;AVGPOST=0.9973;RSQ=0.9378;ERATE=0.0003;THETA=0.0017;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 234206216 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7102;ERATE=0.0003;THETA=0.0057;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234206247 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8845;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234206313 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.923;LDAF=0.9843;AVGPOST=0.9995;RSQ=0.9848;ERATE=0.0003;THETA=0.0004;AC=2150;AN=2184 GT:DS:GL:BD 0.98443222 1
1 234206319 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234206489 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.973;LDAF=0.3878;AVGPOST=0.9885;RSQ=0.9835;ERATE=0.0005;THETA=0.0019;AC=849;AN=2184 GT:DS:GL:BD 0.38873628 0
1 234206501 rs34460072 GT G 40789 PASS INDEL;BAVGPOST=0.982;BRSQ=0.964;LDAF=0.6558;AVGPOST=0.9838;RSQ=0.9736;ERATE=0.0016;THETA=0.0004;AC=1437;AN=2184 GT:DS:GL:BD 0.65796703 1
1 234206530 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0024;AVGPOST=0.9968;RSQ=0.5526;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234206593 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.981;LDAF=0.2916;AVGPOST=0.9923;RSQ=0.9870;ERATE=0.0005;THETA=0.0030;AC=638;AN=2184 GT:DS:GL:BD 0.29212454 0
1 234206808 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8537;ERATE=0.0003;THETA=0.0174;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234206857 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0027;AVGPOST=0.9993;RSQ=0.8917;ERATE=0.0003;THETA=0.0080;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234206872 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.975;LDAF=0.0170;AVGPOST=0.9988;RSQ=0.9745;ERATE=0.0003;THETA=0.0027;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 234206930 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0064;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234207021 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.8233;ERATE=0.0004;THETA=0.0045;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234207259 . CTT C 1416 PASS INDEL;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0085;AVGPOST=0.9974;RSQ=0.8813;ERATE=0.0004;THETA=0.0247;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 234207291 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0037;AVGPOST=0.9997;RSQ=0.9601;ERATE=0.0003;THETA=0.0084;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234207352 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.9073;ERATE=0.0003;THETA=0.0116;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234207451 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6626;ERATE=0.0003;THETA=0.0139;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234207520 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0061;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234207635 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0184;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234207752 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0128;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234207804 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.884;LDAF=0.0069;AVGPOST=0.9987;RSQ=0.9166;ERATE=0.0004;THETA=0.0045;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234207931 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7748;ERATE=0.0003;THETA=0.0222;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234208125 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.921;LDAF=0.0045;AVGPOST=0.9991;RSQ=0.9072;ERATE=0.0004;THETA=0.0122;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234208207 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7697;ERATE=0.0003;THETA=0.0119;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234208229 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0079;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234208300 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.928;LDAF=0.0795;AVGPOST=0.9835;RSQ=0.9274;ERATE=0.0007;THETA=0.0348;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 234208328 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0051;AVGPOST=0.9989;RSQ=0.9066;ERATE=0.0003;THETA=0.0113;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234208334 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6944;ERATE=0.0004;THETA=0.0195;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234208348 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.880;LDAF=0.0128;AVGPOST=0.9972;RSQ=0.9116;ERATE=0.0004;THETA=0.0139;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 234208364 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8999;ERATE=0.0003;THETA=0.0298;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234208428 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9756;ERATE=0.0003;THETA=0.0138;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234208570 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.8890;ERATE=0.0003;THETA=0.0197;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234208675 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8890;ERATE=0.0003;THETA=0.0151;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234208803 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.948;LDAF=0.0552;AVGPOST=0.9917;RSQ=0.9473;ERATE=0.0017;THETA=0.0242;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 234208910 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.816;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8858;ERATE=0.0003;THETA=0.0090;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234209015 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.860;LDAF=0.0032;AVGPOST=0.9989;RSQ=0.8672;ERATE=0.0003;THETA=0.0302;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234209087 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.955;BRSQ=0.883;LDAF=0.8152;AVGPOST=0.9591;RSQ=0.9016;ERATE=0.0021;THETA=0.0164;AC=1790;AN=2184 GT:DS:GL:BD 0.81959707 1
1 234209617 . AT A 31 PASS INDEL;BAVGPOST=0.998;BRSQ=0.787;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.8001;ERATE=0.0003;THETA=0.0280;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234209667 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9787;ERATE=0.0003;THETA=0.0311;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234209757 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0085;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234209797 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.8135;ERATE=0.0003;THETA=0.0105;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234209841 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8595;ERATE=0.0003;THETA=0.0129;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234209850 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0074;AVGPOST=0.9997;RSQ=0.9826;ERATE=0.0003;THETA=0.0067;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234209937 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6674;ERATE=0.0003;THETA=0.0077;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234210250 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.988;LDAF=0.8369;AVGPOST=0.9911;RSQ=0.9756;ERATE=0.0005;THETA=0.0027;AC=1832;AN=2184 GT:DS:GL:BD 0.83882785 1
1 234210346 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0028;AVGPOST=0.9991;RSQ=0.8657;ERATE=0.0003;THETA=0.0074;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234210465 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9236;ERATE=0.0005;THETA=0.0083;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234210491 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.988;LDAF=0.2734;AVGPOST=0.9908;RSQ=0.9819;ERATE=0.0004;THETA=0.0013;AC=596;AN=2184 GT:DS:GL:BD 0.27289379 0
1 234210638 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7052;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234210657 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234210684 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8289;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234210715 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8689;ERATE=0.0003;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234210755 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6618;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234210819 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.968;LDAF=0.0806;AVGPOST=0.9956;RSQ=0.9787;ERATE=0.0004;THETA=0.0004;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 234210829 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.915;LDAF=0.0115;AVGPOST=0.9974;RSQ=0.9231;ERATE=0.0003;THETA=0.0009;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 234210840 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0032;AVGPOST=0.9993;RSQ=0.9084;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234210976 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8664;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234211003 . GAAAC G 172 PASS INDEL;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5650;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234211080 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.653;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5945;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234211153 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6329;ERATE=0.0004;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234211244 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.0891;AVGPOST=0.9990;RSQ=0.9960;ERATE=0.0003;THETA=0.0005;AC=196;AN=2184 GT:DS:GL:BD 0.08974359 0
1 234211351 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8702;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234211412 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0062;AVGPOST=0.9995;RSQ=0.9588;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234211440 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234211471 . AAAAT A 697 PASS INDEL;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0055;AVGPOST=0.9991;RSQ=0.9291;ERATE=0.0003;THETA=0.0010;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234211534 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8480;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234211544 rs75015281 AG A 13365 PASS INDEL;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.0821;AVGPOST=0.9990;RSQ=0.9957;ERATE=0.0003;THETA=0.0005;AC=180;AN=2184 GT:DS:GL:BD 0.08241758 0
1 234211580 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234211616 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.880;LDAF=0.0064;AVGPOST=0.9984;RSQ=0.8887;ERATE=0.0007;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234211627 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.2416;AVGPOST=0.9955;RSQ=0.9919;ERATE=0.0003;THETA=0.0006;AC=527;AN=2184 GT:DS:GL:BD 0.24130036 0
1 234211671 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.663;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7683;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234211742 rs6143675 ACAGACCG A 7812 PASS INDEL;BAVGPOST=0.996;BRSQ=0.962;LDAF=0.0348;AVGPOST=0.9950;RSQ=0.9499;ERATE=0.0005;THETA=0.0012;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 234211823 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5704;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234211859 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0029;AVGPOST=0.9965;RSQ=0.5694;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234211869 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.2036;AVGPOST=0.9952;RSQ=0.9905;ERATE=0.0005;THETA=0.0004;AC=444;AN=2184 GT:DS:GL:BD 0.20329671 0
1 234211980 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.937;LDAF=0.0148;AVGPOST=0.9955;RSQ=0.8746;ERATE=0.0003;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 234212022 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7149;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234212049 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.664;LDAF=0.0007;AVGPOST=0.9989;RSQ=0.3191;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234212081 rs3040127 T TGCCTCA 84161 PASS INDEL;BAVGPOST=0.957;BRSQ=0.940;LDAF=0.4945;AVGPOST=0.9729;RSQ=0.9673;ERATE=0.0006;THETA=0.0011;AC=1084;AN=2184 GT:DS:GL:BD 0.49633700 0
1 234212082 . G GCCTCAC 33851 PASS INDEL;BAVGPOST=0.953;BRSQ=0.933;LDAF=0.4863;AVGPOST=0.9544;RSQ=0.9439;ERATE=0.0045;THETA=0.0002;AC=1071;AN=2184 GT:DS:GL:BD 0.49038461 0
1 234212197 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0021;AVGPOST=0.9974;RSQ=0.5235;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234212298 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.620;LDAF=0.0087;AVGPOST=0.9937;RSQ=0.6936;ERATE=0.0008;THETA=0.0010;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234212322 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.980;LDAF=0.0901;AVGPOST=0.9983;RSQ=0.9916;ERATE=0.0004;THETA=0.0004;AC=197;AN=2184 GT:DS:GL:BD 0.09020147 0
1 234212356 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.799;LDAF=0.0052;AVGPOST=0.9985;RSQ=0.8696;ERATE=0.0003;THETA=0.0013;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234212407 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0057;AVGPOST=0.9976;RSQ=0.8254;ERATE=0.0005;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234212571 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0101;AVGPOST=0.9963;RSQ=0.8616;ERATE=0.0005;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 234212587 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.752;LDAF=0.0026;AVGPOST=0.9983;RSQ=0.7513;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234212665 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7041;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234212731 . A AG 2827 PASS INDEL;BAVGPOST=0.927;BRSQ=0.822;LDAF=0.2175;AVGPOST=0.9606;RSQ=0.9259;ERATE=0.0013;THETA=0.0006;AC=480;AN=2184 GT:DS:GL:BD 0.21978022 0
1 234212734 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.919;LDAF=0.2366;AVGPOST=0.9588;RSQ=0.9262;ERATE=0.0052;THETA=0.0005;AC=512;AN=2184 GT:DS:GL:BD 0.23443224 0
1 234213408 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0266;AVGPOST=0.9985;RSQ=0.9749;ERATE=0.0003;THETA=0.0002;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 234213409 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0038;AVGPOST=0.9992;RSQ=0.9063;ERATE=0.0006;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234213483 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5979;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234213563 . C CAG 99 PASS INDEL;BAVGPOST=0.999;BRSQ=0.806;LDAF=0.0022;AVGPOST=0.9985;RSQ=0.7530;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234213640 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.920;LDAF=0.0031;AVGPOST=0.9996;RSQ=0.9519;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234213673 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234213675 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234213740 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234213800 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0264;AVGPOST=0.9998;RSQ=0.9970;ERATE=0.0003;THETA=0.0004;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 234213985 . CT C 533 PASS INDEL;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0044;AVGPOST=0.9983;RSQ=0.8397;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234214136 . A AT 370 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9335;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234214198 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.0892;AVGPOST=0.9995;RSQ=0.9976;ERATE=0.0003;THETA=0.0005;AC=195;AN=2184 GT:DS:GL:BD 0.08928572 0
1 234214201 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9995;RSQ=0.9121;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234214216 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9451;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234214234 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0079;AVGPOST=0.9998;RSQ=0.9860;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 234214355 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0263;AVGPOST=0.9982;RSQ=0.9737;ERATE=0.0010;THETA=0.0007;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 234214471 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0257;AVGPOST=0.9996;RSQ=0.9939;ERATE=0.0003;THETA=0.0004;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 234214474 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8384;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234214513 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.882;LDAF=0.0267;AVGPOST=0.9950;RSQ=0.9236;ERATE=0.0003;THETA=0.0002;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 234214526 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.654;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4296;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234214555 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.987;LDAF=0.1738;AVGPOST=0.9934;RSQ=0.9852;ERATE=0.0005;THETA=0.0005;AC=377;AN=2184 GT:DS:GL:BD 0.17261904 0
1 234214582 . A AC 12 PASS INDEL;BAVGPOST=0.999;BRSQ=0.702;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6445;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234214597 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7561;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234214634 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0018;AVGPOST=0.9986;RSQ=0.7265;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234214711 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.732;LDAF=0.0025;AVGPOST=0.9967;RSQ=0.5682;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234214714 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9814;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234214716 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.824;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7820;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234214813 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234214847 rs35948197 T TG 36742 PASS INDEL;BAVGPOST=0.994;BRSQ=0.989;LDAF=0.2396;AVGPOST=0.9957;RSQ=0.9918;ERATE=0.0005;THETA=0.0006;AC=525;AN=2184 GT:DS:GL:BD 0.24038461 0
1 234215005 . TC T 36 PASS INDEL;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6208;ERATE=0.0003;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234215138 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.933;LDAF=0.0138;AVGPOST=0.9967;RSQ=0.9104;ERATE=0.0004;THETA=0.0011;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 234215185 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0023;AVGPOST=0.9998;RSQ=0.9518;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234215367 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6523;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234215485 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6160;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234215486 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4530;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234215711 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0004;AVGPOST=0.9995;RSQ=0.5338;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234215786 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0075;AVGPOST=0.9995;RSQ=0.9706;ERATE=0.0004;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234216107 . AG A 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6223;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234216146 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234216177 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2792;AVGPOST=0.9948;RSQ=0.9905;ERATE=0.0003;THETA=0.0003;AC=610;AN=2184 GT:DS:GL:BD 0.27930403 0
1 234216193 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0073;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234216467 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.7476;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234216552 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.5757;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234216553 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.674;LDAF=0.0028;AVGPOST=0.9963;RSQ=0.5134;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234216628 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9463;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234216682 . ATTGC A 61 PASS INDEL;BAVGPOST=0.999;BRSQ=0.809;LDAF=0.0036;AVGPOST=0.9956;RSQ=0.5108;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234216686 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.822;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8155;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234216696 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6340;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234216777 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234216915 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234216996 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.776;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5224;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234217219 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0073;AVGPOST=0.9996;RSQ=0.9738;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234217223 . A AG 955 PASS INDEL;BAVGPOST=0.996;BRSQ=0.744;LDAF=0.0094;AVGPOST=0.9944;RSQ=0.7321;ERATE=0.0006;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234217237 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.8229;AVGPOST=0.9958;RSQ=0.9893;ERATE=0.0004;THETA=0.0003;AC=1799;AN=2184 GT:DS:GL:BD 0.82371795 1
1 234217242 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6195;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234217292 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6216;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234217355 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0818;AVGPOST=0.9991;RSQ=0.9954;ERATE=0.0003;THETA=0.0012;AC=179;AN=2184 GT:DS:GL:BD 0.08195971 0
1 234217385 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234217388 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6659;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234217447 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234217501 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.874;LDAF=0.0125;AVGPOST=0.9967;RSQ=0.8842;ERATE=0.0003;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 234217614 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0156;AVGPOST=0.9904;RSQ=0.7771;ERATE=0.0007;THETA=0.0009;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 234217629 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.492;LDAF=0.0028;AVGPOST=0.9972;RSQ=0.5631;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234217633 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.615;LDAF=0.0035;AVGPOST=0.9973;RSQ=0.6901;ERATE=0.0006;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234217643 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0081;AVGPOST=0.9950;RSQ=0.7806;ERATE=0.0005;THETA=0.0009;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234217694 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0801;AVGPOST=0.9974;RSQ=0.9872;ERATE=0.0005;THETA=0.0003;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 234217793 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.763;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6343;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234217794 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6236;ERATE=0.0003;THETA=0.0044;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234217835 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0040;AVGPOST=0.9995;RSQ=0.9462;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234217852 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.8847;AVGPOST=0.9939;RSQ=0.9784;ERATE=0.0004;THETA=0.0003;AC=1933;AN=2184 GT:DS:GL:BD 0.88507324 1
1 234217878 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7150;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234217907 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0042;AVGPOST=0.9992;RSQ=0.9174;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234217968 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0078;AVGPOST=0.9990;RSQ=0.9445;ERATE=0.0004;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234218105 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234218147 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.985;LDAF=0.2450;AVGPOST=0.9913;RSQ=0.9823;ERATE=0.0030;THETA=0.0079;AC=532;AN=2184 GT:DS:GL:BD 0.24358974 0
1 234218181 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.983;LDAF=0.1009;AVGPOST=0.9915;RSQ=0.9689;ERATE=0.0005;THETA=0.0020;AC=218;AN=2184 GT:DS:GL:BD 0.09981685 0
1 234218190 . GT G 133 PASS INDEL;BAVGPOST=0.999;BRSQ=0.748;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0114;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234218391 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.949;LDAF=0.2809;AVGPOST=0.9746;RSQ=0.9525;ERATE=0.0029;THETA=0.0043;AC=616;AN=2184 GT:DS:GL:BD 0.28205130 0
1 234218439 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.927;LDAF=0.1319;AVGPOST=0.9685;RSQ=0.9097;ERATE=0.0045;THETA=0.0011;AC=283;AN=2184 GT:DS:GL:BD 0.12957875 0
1 234218441 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.945;LDAF=0.0282;AVGPOST=0.9941;RSQ=0.9293;ERATE=0.0003;THETA=0.0038;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 234218572 . GA G 113 PASS INDEL;BAVGPOST=0.999;BRSQ=0.668;LDAF=0.0028;AVGPOST=0.9977;RSQ=0.6728;ERATE=0.0006;THETA=0.0050;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234218603 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.912;LDAF=0.0050;AVGPOST=0.9988;RSQ=0.8990;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234218738 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0080;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234218739 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.862;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234218803 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0035;AVGPOST=0.9984;RSQ=0.8326;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234218913 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8015;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234218925 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0134;AVGPOST=0.9984;RSQ=0.9512;ERATE=0.0003;THETA=0.0079;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 234218955 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.639;LDAF=0.0027;AVGPOST=0.9979;RSQ=0.6992;ERATE=0.0005;THETA=0.0028;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234219079 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7049;ERATE=0.0004;THETA=0.0025;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234219151 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.9929;AVGPOST=0.9985;RSQ=0.9259;ERATE=0.0003;THETA=0.0024;AC=2168;AN=2184 GT:DS:GL:BD 0.99267399 1
1 234219212 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.975;LDAF=0.0944;AVGPOST=0.9949;RSQ=0.9791;ERATE=0.0004;THETA=0.0017;AC=208;AN=2184 GT:DS:GL:BD 0.09523810 0
1 234219314 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7559;ERATE=0.0003;THETA=0.0048;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234219431 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0059;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234219614 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.955;LDAF=0.2700;AVGPOST=0.9793;RSQ=0.9719;ERATE=0.0009;THETA=0.0005;AC=593;AN=2184 GT:DS:GL:BD 0.27152014 0
1 234219692 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.719;LDAF=0.0036;AVGPOST=0.9954;RSQ=0.5180;ERATE=0.0006;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234219744 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6455;ERATE=0.0005;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234219937 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0089;AVGPOST=0.9980;RSQ=0.9097;ERATE=0.0004;THETA=0.0028;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 234219964 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0181;AVGPOST=0.9979;RSQ=0.9546;ERATE=0.0004;THETA=0.0022;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 234220043 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0078;AVGPOST=0.9996;RSQ=0.9802;ERATE=0.0004;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 234220133 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6056;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234220214 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.960;LDAF=0.0125;AVGPOST=0.9995;RSQ=0.9810;ERATE=0.0003;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 234220255 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0033;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234220379 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234220391 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.953;LDAF=0.0113;AVGPOST=0.9979;RSQ=0.9351;ERATE=0.0003;THETA=0.0027;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234220418 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0081;AVGPOST=0.9991;RSQ=0.9610;ERATE=0.0004;THETA=0.0027;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 234220450 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0065;AVGPOST=0.9998;RSQ=0.9864;ERATE=0.0003;THETA=0.0035;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234220550 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.786;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7754;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234220559 rs34515048 G GAT 56320 PASS INDEL;BAVGPOST=0.981;BRSQ=0.978;LDAF=0.2959;AVGPOST=0.9830;RSQ=0.9779;ERATE=0.0004;THETA=0.0009;AC=647;AN=2184 GT:DS:GL:BD 0.29624543 0
1 234220636 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.966;LDAF=0.0271;AVGPOST=0.9986;RSQ=0.9767;ERATE=0.0003;THETA=0.0006;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 234220653 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6963;ERATE=0.0003;THETA=0.0040;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234220737 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7511;ERATE=0.0003;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234220806 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7263;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234220827 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0065;AVGPOST=0.9997;RSQ=0.9798;ERATE=0.0003;THETA=0.0011;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234221126 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7267;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234221296 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0017;AVGPOST=0.9997;RSQ=0.9322;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234221302 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.978;LDAF=0.8826;AVGPOST=0.9931;RSQ=0.9754;ERATE=0.0004;THETA=0.0005;AC=1930;AN=2184 GT:DS:GL:BD 0.88369966 1
1 234221341 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234221505 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234221606 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0039;AVGPOST=0.9996;RSQ=0.9502;ERATE=0.0003;THETA=0.0053;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234221658 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8689;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234221989 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234222040 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0068;AVGPOST=0.9998;RSQ=0.9881;ERATE=0.0003;THETA=0.0009;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234222045 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0051;AVGPOST=0.9976;RSQ=0.8051;ERATE=0.0007;THETA=0.0012;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234222074 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6413;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234222129 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7415;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234222159 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0097;AVGPOST=0.9997;RSQ=0.9867;ERATE=0.0003;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 234222334 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0019;AVGPOST=0.9993;RSQ=0.8411;ERATE=0.0008;THETA=0.0032;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234222479 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234222624 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0064;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234222668 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9647;ERATE=0.0003;THETA=0.0026;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234222674 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8768;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234222710 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0043;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234222928 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234222930 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0019;AVGPOST=0.9996;RSQ=0.9026;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234223060 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0070;AVGPOST=0.9997;RSQ=0.9853;ERATE=0.0003;THETA=0.0048;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234223073 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6817;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234223179 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234223278 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0003;THETA=0.0027;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234223284 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0052;AVGPOST=0.9991;RSQ=0.9211;ERATE=0.0003;THETA=0.0017;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234223342 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7426;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234223402 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0064;AVGPOST=0.9998;RSQ=0.9863;ERATE=0.0003;THETA=0.0017;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234223684 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0129;AVGPOST=0.9995;RSQ=0.9862;ERATE=0.0003;THETA=0.0006;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 234223844 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9771;ERATE=0.0003;THETA=0.0015;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234223848 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234223968 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.974;LDAF=0.1258;AVGPOST=0.9926;RSQ=0.9763;ERATE=0.0006;THETA=0.0006;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 234223992 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4588;ERATE=0.0004;THETA=0.0044;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234224015 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9284;ERATE=0.0003;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234224112 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.7679;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234224158 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.975;LDAF=0.0207;AVGPOST=0.9977;RSQ=0.9595;ERATE=0.0003;THETA=0.0032;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 234224178 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.759;LDAF=0.0029;AVGPOST=0.9961;RSQ=0.5088;ERATE=0.0006;THETA=0.0049;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234224346 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0092;AVGPOST=0.9996;RSQ=0.9809;ERATE=0.0003;THETA=0.0048;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234224362 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0027;AVGPOST=0.9988;RSQ=0.7925;ERATE=0.0004;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234224372 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0060;AVGPOST=0.9995;RSQ=0.9642;ERATE=0.0003;THETA=0.0018;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234224404 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6116;ERATE=0.0003;THETA=0.0078;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234224418 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0075;AVGPOST=0.9997;RSQ=0.9835;ERATE=0.0003;THETA=0.0017;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234224420 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234224429 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234224593 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5623;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234224855 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7702;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234224898 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8064;ERATE=0.0003;THETA=0.0059;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234224923 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0201;AVGPOST=1.0000;RSQ=0.9990;ERATE=0.0003;THETA=0.0047;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 234225078 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5697;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234225081 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0212;AVGPOST=0.9985;RSQ=0.9706;ERATE=0.0003;THETA=0.0034;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 234225122 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0043;AVGPOST=0.9986;RSQ=0.8809;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234225137 . AAGC A 4840 PASS INDEL;BAVGPOST=0.998;BRSQ=0.967;LDAF=0.0241;AVGPOST=0.9945;RSQ=0.9143;ERATE=0.0005;THETA=0.0004;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 234225368 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0004;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234225395 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9451;ERATE=0.0003;THETA=0.0052;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234225447 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7682;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234225517 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0074;AVGPOST=0.9996;RSQ=0.9763;ERATE=0.0003;THETA=0.0042;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234225596 rs112442484 AACAG A 4732 PASS INDEL;BAVGPOST=0.995;BRSQ=0.942;LDAF=0.0204;AVGPOST=0.9979;RSQ=0.9564;ERATE=0.0007;THETA=0.0031;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 234225625 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0095;AVGPOST=0.9995;RSQ=0.9798;ERATE=0.0003;THETA=0.0008;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 234225696 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6980;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234225752 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0202;AVGPOST=0.9997;RSQ=0.9939;ERATE=0.0003;THETA=0.0050;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 234225951 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0106;AVGPOST=0.9996;RSQ=0.9820;ERATE=0.0003;THETA=0.0017;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234225979 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.654;LDAF=0.0142;AVGPOST=0.9837;RSQ=0.5674;ERATE=0.0056;THETA=0.0015;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234226193 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0003;AVGPOST=0.9995;RSQ=0.3770;ERATE=0.0003;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 234226234 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0023;AVGPOST=0.9998;RSQ=0.9628;ERATE=0.0003;THETA=0.0047;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234226282 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.966;LDAF=0.0135;AVGPOST=0.9987;RSQ=0.9661;ERATE=0.0003;THETA=0.0010;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 234226408 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0003;AVGPOST=0.9995;RSQ=0.3430;ERATE=0.0003;THETA=0.0048;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 234226470 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.915;LDAF=0.0119;AVGPOST=0.9973;RSQ=0.9040;ERATE=0.0003;THETA=0.0035;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234226476 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234226590 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7891;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234226620 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234226631 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0190;AVGPOST=0.9992;RSQ=0.9833;ERATE=0.0003;THETA=0.0037;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 234226695 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9791;ERATE=0.0003;THETA=0.0023;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234226705 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9483;ERATE=0.0003;THETA=0.0013;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234226737 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5826;ERATE=0.0003;THETA=0.0126;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234226964 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0003;THETA=0.0088;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234227005 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9557;ERATE=0.0003;THETA=0.0024;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234227083 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234227084 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.769;LDAF=0.0018;AVGPOST=0.9987;RSQ=0.7169;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234227127 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.976;LDAF=0.0896;AVGPOST=0.9948;RSQ=0.9762;ERATE=0.0003;THETA=0.0038;AC=194;AN=2184 GT:DS:GL:BD 0.08882784 0
1 234227202 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0074;AVGPOST=0.9998;RSQ=0.9907;ERATE=0.0003;THETA=0.0010;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234227367 . T TA 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5519;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234227375 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7995;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234227580 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7877;ERATE=0.0003;THETA=0.0024;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234227626 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9460;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234227790 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.808;LDAF=0.0041;AVGPOST=0.9968;RSQ=0.6725;ERATE=0.0010;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234227821 . T TG 7 PASS INDEL;BAVGPOST=0.998;BRSQ=0.711;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6262;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234227971 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234228102 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0007;AVGPOST=0.9988;RSQ=0.3638;ERATE=0.0005;THETA=0.0011;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 234228154 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.3145;AVGPOST=0.9895;RSQ=0.9878;ERATE=0.0005;THETA=0.0004;AC=690;AN=2184 GT:DS:GL:BD 0.31593406 0
1 234228567 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0067;AVGPOST=0.9980;RSQ=0.8936;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234228780 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234228860 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234229059 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234229278 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9793;ERATE=0.0003;THETA=0.0013;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234229329 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5752;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234229461 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.685;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.5580;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234229521 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9271;ERATE=0.0003;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234229533 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6057;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234229559 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0073;AVGPOST=0.9991;RSQ=0.9397;ERATE=0.0005;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234229595 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234229600 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234229704 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.6131;ERATE=0.0003;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234229753 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0116;AVGPOST=0.9967;RSQ=0.8971;ERATE=0.0008;THETA=0.0013;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234229928 . AC A 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5514;ERATE=0.0005;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234230064 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234230154 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=0.9990;RSQ=0.9714;ERATE=0.0003;THETA=0.0046;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234230295 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0034;AVGPOST=0.9976;RSQ=0.7639;ERATE=0.0005;THETA=0.0020;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234230336 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0027;AVGPOST=0.9988;RSQ=0.8441;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234230388 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4256;AVGPOST=0.9960;RSQ=0.9949;ERATE=0.0010;THETA=0.0005;AC=930;AN=2184 GT:DS:GL:BD 0.42582417 0
1 234230462 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234230611 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.823;LDAF=0.0037;AVGPOST=0.9995;RSQ=0.9410;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234230630 . CAT C 28 PASS INDEL;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.6404;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234230641 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234230642 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.6158;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234231104 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0039;AVGPOST=0.9986;RSQ=0.8500;ERATE=0.0003;THETA=0.0035;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234231105 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.890;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9628;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234231228 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6262;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234231274 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7600;ERATE=0.0003;THETA=0.0056;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234231285 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4166;AVGPOST=0.9976;RSQ=0.9972;ERATE=0.0003;THETA=0.0005;AC=910;AN=2184 GT:DS:GL:BD 0.41666666 0
1 234231364 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.766;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7959;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234231429 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3177;AVGPOST=0.9995;RSQ=0.9992;ERATE=0.0005;THETA=0.0005;AC=695;AN=2184 GT:DS:GL:BD 0.31822345 0
1 234231460 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8860;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234231504 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6199;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234231664 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.775;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234231668 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0052;AVGPOST=0.9995;RSQ=0.9530;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234231811 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0018;AVGPOST=0.9996;RSQ=0.9134;ERATE=0.0003;THETA=0.0030;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234231814 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3269;AVGPOST=0.9986;RSQ=0.9981;ERATE=0.0004;THETA=0.0017;AC=715;AN=2184 GT:DS:GL:BD 0.32738096 0
1 234232006 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.757;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7921;ERATE=0.0004;THETA=0.0094;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234232020 rs111594630 C CCTCT 81809 PASS INDEL;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.3307;AVGPOST=0.9948;RSQ=0.9938;ERATE=0.0009;THETA=0.0011;AC=725;AN=2184 GT:DS:GL:BD 0.33195969 0
1 234232049 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5721;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234232062 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.733;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.7298;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234232219 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234232257 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0057;AVGPOST=0.9994;RSQ=0.9584;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234232341 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0916;AVGPOST=0.9978;RSQ=0.9909;ERATE=0.0003;THETA=0.0010;AC=199;AN=2184 GT:DS:GL:BD 0.09111722 0
1 234232523 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.5808;AVGPOST=0.9933;RSQ=0.9906;ERATE=0.0006;THETA=0.0013;AC=1269;AN=2184 GT:DS:GL:BD 0.58104396 1
1 234232598 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7063;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234232605 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0021;AVGPOST=0.9991;RSQ=0.8234;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234232609 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0059;AVGPOST=0.9991;RSQ=0.9412;ERATE=0.0003;THETA=0.0001;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234232781 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0033;AVGPOST=0.9975;RSQ=0.7110;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234233076 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0023;AVGPOST=0.9997;RSQ=0.9458;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234233117 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234233218 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3110;AVGPOST=0.9984;RSQ=0.9979;ERATE=0.0003;THETA=0.0006;AC=680;AN=2184 GT:DS:GL:BD 0.31135532 0
1 234233232 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.9073;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234233319 . GT G 32 PASS INDEL;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234233557 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9936;ERATE=0.0003;THETA=0.0023;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234233584 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9313;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234233674 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.616;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5883;ERATE=0.0004;THETA=0.0034;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234233683 . AG A 448 PASS INDEL;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9662;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234233710 . TTGG T 904 PASS INDEL;BAVGPOST=0.998;BRSQ=0.913;LDAF=0.0044;AVGPOST=0.9991;RSQ=0.9191;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234233780 . TTGG T 109 PASS INDEL;BAVGPOST=0.999;BRSQ=0.781;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6599;ERATE=0.0004;THETA=0.0085;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234233883 . ATGG A 181 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0018;AVGPOST=0.9993;RSQ=0.8405;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234234233 . TTGG T 1054 PASS INDEL;BAVGPOST=0.998;BRSQ=0.869;LDAF=0.0072;AVGPOST=0.9979;RSQ=0.8913;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234234269 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234234507 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0102;AVGPOST=0.9996;RSQ=0.9850;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234234577 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0184;AVGPOST=0.9997;RSQ=0.9926;ERATE=0.0003;THETA=0.0004;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 234234578 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.952;LDAF=0.0237;AVGPOST=0.9967;RSQ=0.9486;ERATE=0.0003;THETA=0.0014;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 234234704 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0275;AVGPOST=0.9985;RSQ=0.9792;ERATE=0.0004;THETA=0.0005;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 234234736 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234234740 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.8026;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234234891 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9333;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234234937 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9372;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234234939 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0055;AVGPOST=0.9996;RSQ=0.9691;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234234940 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0055;AVGPOST=0.9996;RSQ=0.9662;ERATE=0.0003;THETA=0.0040;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234235012 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.967;LDAF=0.0363;AVGPOST=0.9981;RSQ=0.9775;ERATE=0.0003;THETA=0.0004;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 234235092 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.959;LDAF=0.2965;AVGPOST=0.9824;RSQ=0.9776;ERATE=0.0011;THETA=0.0003;AC=658;AN=2184 GT:DS:GL:BD 0.30128205 0
1 234235291 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.961;BRSQ=0.939;LDAF=0.5549;AVGPOST=0.9766;RSQ=0.9667;ERATE=0.0006;THETA=0.0004;AC=1221;AN=2184 GT:DS:GL:BD 0.55906594 1
1 234235292 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0043;AVGPOST=0.9969;RSQ=0.6688;ERATE=0.0006;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234235327 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.774;LDAF=0.0042;AVGPOST=0.9937;RSQ=0.4404;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234235369 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.946;LDAF=0.0202;AVGPOST=0.9946;RSQ=0.8970;ERATE=0.0017;THETA=0.0005;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 234235436 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0136;AVGPOST=0.9992;RSQ=0.9786;ERATE=0.0003;THETA=0.0007;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 234235638 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.7627;AVGPOST=0.9967;RSQ=0.9929;ERATE=0.0004;THETA=0.0003;AC=1665;AN=2184 GT:DS:GL:BD 0.76236266 1
1 234235642 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0005;AVGPOST=0.9992;RSQ=0.3493;ERATE=0.0004;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 234235763 . GC G 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0037;AVGPOST=0.9946;RSQ=0.4204;ERATE=0.0006;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234235857 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6768;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234235911 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234236069 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3134;AVGPOST=0.9989;RSQ=0.9986;ERATE=0.0003;THETA=0.0006;AC=686;AN=2184 GT:DS:GL:BD 0.31410256 0
1 234236256 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234236257 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9435;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234236353 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234236399 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0060;AVGPOST=0.9997;RSQ=0.9748;ERATE=0.0004;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234236642 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6841;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234236655 . C CA 1381 PASS INDEL;BAVGPOST=0.996;BRSQ=0.758;LDAF=0.0067;AVGPOST=0.9976;RSQ=0.8521;ERATE=0.0004;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234236677 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6772;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234236908 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234236946 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.893;LDAF=0.0127;AVGPOST=0.9974;RSQ=0.9205;ERATE=0.0009;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 234236975 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9843;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234236985 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6393;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234237187 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7044;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234237344 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.684;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7797;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234237489 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0058;AVGPOST=0.9995;RSQ=0.9607;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234237498 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6836;ERATE=0.0014;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234237537 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5235;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234237583 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0244;AVGPOST=0.9962;RSQ=0.9499;ERATE=0.0003;THETA=0.0006;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 234237604 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6745;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234237631 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.879;LDAF=0.0144;AVGPOST=0.9943;RSQ=0.8579;ERATE=0.0005;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 234237641 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234237679 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0003;THETA=0.0034;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234237689 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9752;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234237691 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.3134;AVGPOST=0.9994;RSQ=0.9992;ERATE=0.0004;THETA=0.0006;AC=685;AN=2184 GT:DS:GL:BD 0.31364468 0
1 234237737 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0185;AVGPOST=0.9992;RSQ=0.9824;ERATE=0.0003;THETA=0.0007;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 234237856 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0060;AVGPOST=0.9997;RSQ=0.9811;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234237885 . CT C 523 PASS INDEL;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0123;AVGPOST=0.9917;RSQ=0.7625;ERATE=0.0004;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234237925 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234238217 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234238423 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.985;LDAF=0.2831;AVGPOST=0.9893;RSQ=0.9869;ERATE=0.0003;THETA=0.0003;AC=622;AN=2184 GT:DS:GL:BD 0.28479853 0
1 234238424 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.985;LDAF=0.2832;AVGPOST=0.9896;RSQ=0.9871;ERATE=0.0004;THETA=0.0005;AC=622;AN=2184 GT:DS:GL:BD 0.28479853 0
1 234238529 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3073;AVGPOST=0.9975;RSQ=0.9969;ERATE=0.0006;THETA=0.0004;AC=673;AN=2184 GT:DS:GL:BD 0.30815017 0
1 234238578 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7848;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234238600 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7425;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234238641 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0215;AVGPOST=0.9999;RSQ=0.9971;ERATE=0.0003;THETA=0.0005;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 234238826 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7144;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234239006 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0237;AVGPOST=0.9967;RSQ=0.9441;ERATE=0.0003;THETA=0.0004;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 234239162 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.940;LDAF=0.0221;AVGPOST=0.9954;RSQ=0.9255;ERATE=0.0003;THETA=0.0002;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 234239164 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.999;LDAF=0.3076;AVGPOST=0.9995;RSQ=0.9992;ERATE=0.0003;THETA=0.0005;AC=673;AN=2184 GT:DS:GL:BD 0.30815017 0
1 234239327 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6746;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234239360 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234239398 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.735;LDAF=0.0035;AVGPOST=0.9986;RSQ=0.8307;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234239447 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6021;ERATE=0.0003;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234239506 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.6398;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234239511 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9561;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234239520 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6216;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234239561 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5637;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234239572 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234239586 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6701;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234239679 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9736;ERATE=0.0003;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234239913 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234239919 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9799;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234240099 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.806;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.8021;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234240149 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0051;AVGPOST=0.9983;RSQ=0.8796;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234240152 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234240170 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9824;ERATE=0.0003;THETA=0.0011;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234240220 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0014;AVGPOST=0.9993;RSQ=0.7822;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234240293 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3084;AVGPOST=0.9986;RSQ=0.9980;ERATE=0.0003;THETA=0.0004;AC=674;AN=2184 GT:DS:GL:BD 0.30860806 0
1 234240348 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.5011;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234240426 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.774;LDAF=0.0023;AVGPOST=0.9993;RSQ=0.8777;ERATE=0.0003;THETA=0.0019;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234240465 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3082;AVGPOST=0.9995;RSQ=0.9992;ERATE=0.0004;THETA=0.0003;AC=674;AN=2184 GT:DS:GL:BD 0.30860806 0
1 234240613 . AT A 24 PASS INDEL;BAVGPOST=0.999;BRSQ=0.661;LDAF=0.0030;AVGPOST=0.9957;RSQ=0.4247;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234240650 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.599;LDAF=0.0024;AVGPOST=0.9977;RSQ=0.5791;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234240651 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.655;LDAF=0.0025;AVGPOST=0.9992;RSQ=0.8538;ERATE=0.0005;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234240731 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.860;LDAF=0.0068;AVGPOST=0.9979;RSQ=0.8653;ERATE=0.0005;THETA=0.0012;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234240743 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.692;LDAF=0.0106;AVGPOST=0.9907;RSQ=0.6815;ERATE=0.0008;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 234240869 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.715;LDAF=0.0214;AVGPOST=0.9881;RSQ=0.7788;ERATE=0.0005;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 234240972 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.825;LDAF=0.0022;AVGPOST=0.9995;RSQ=0.9163;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234240974 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3071;AVGPOST=0.9981;RSQ=0.9980;ERATE=0.0004;THETA=0.0005;AC=672;AN=2184 GT:DS:GL:BD 0.30769232 0
1 234241017 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.6889;AVGPOST=0.9940;RSQ=0.9900;ERATE=0.0010;THETA=0.0004;AC=1505;AN=2184 GT:DS:GL:BD 0.68910259 1
1 234241040 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234241055 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0068;AVGPOST=0.9990;RSQ=0.9448;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234241137 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.978;LDAF=0.6462;AVGPOST=0.9902;RSQ=0.9859;ERATE=0.0004;THETA=0.0002;AC=1412;AN=2184 GT:DS:GL:BD 0.64652014 1
1 234241138 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.982;LDAF=0.2892;AVGPOST=0.9910;RSQ=0.9888;ERATE=0.0003;THETA=0.0005;AC=634;AN=2184 GT:DS:GL:BD 0.29029304 0
1 234241317 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7403;ERATE=0.0005;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234241385 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7011;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234241502 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6396;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234241558 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.957;LDAF=0.0201;AVGPOST=0.9959;RSQ=0.9228;ERATE=0.0006;THETA=0.0002;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 234241604 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234241703 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0136;AVGPOST=0.9994;RSQ=0.9834;ERATE=0.0003;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 234241717 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0021;AVGPOST=0.9989;RSQ=0.8046;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234241720 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0018;AVGPOST=0.9997;RSQ=0.9264;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234241819 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.987;LDAF=0.1456;AVGPOST=0.9984;RSQ=0.9948;ERATE=0.0004;THETA=0.0002;AC=318;AN=2184 GT:DS:GL:BD 0.14560440 0
1 234241926 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.899;LDAF=0.0317;AVGPOST=0.9965;RSQ=0.9519;ERATE=0.0006;THETA=0.0019;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 234242163 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.679;LDAF=0.0007;AVGPOST=0.9987;RSQ=0.2428;ERATE=0.0003;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 234242212 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3150;AVGPOST=0.9994;RSQ=0.9991;ERATE=0.0003;THETA=0.0005;AC=689;AN=2184 GT:DS:GL:BD 0.31547618 0
1 234242280 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7745;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234242305 . A AG 67 PASS INDEL;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6507;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234242373 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234242504 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0013;AVGPOST=0.9997;RSQ=0.8972;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234242619 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3080;AVGPOST=0.9998;RSQ=0.9997;ERATE=0.0003;THETA=0.0005;AC=674;AN=2184 GT:DS:GL:BD 0.30860806 0
1 234242690 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3084;AVGPOST=0.9989;RSQ=0.9987;ERATE=0.0003;THETA=0.0005;AC=674;AN=2184 GT:DS:GL:BD 0.30860806 0
1 234242760 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3076;AVGPOST=0.9993;RSQ=0.9990;ERATE=0.0004;THETA=0.0004;AC=673;AN=2184 GT:DS:GL:BD 0.30815017 0
1 234242776 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234242964 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.881;LDAF=0.0023;AVGPOST=0.9996;RSQ=0.9261;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234243059 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3343;AVGPOST=0.9988;RSQ=0.9985;ERATE=0.0003;THETA=0.0004;AC=731;AN=2184 GT:DS:GL:BD 0.33470696 0
1 234243253 . A AT 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0019;AVGPOST=0.9973;RSQ=0.4736;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234243318 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234243343 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234243459 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5021;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234243496 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3134;AVGPOST=0.9994;RSQ=0.9991;ERATE=0.0003;THETA=0.0008;AC=686;AN=2184 GT:DS:GL:BD 0.31410256 0
1 234243498 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6934;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234243553 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234243732 . G GTA 305 PASS INDEL;BAVGPOST=0.999;BRSQ=0.739;LDAF=0.0043;AVGPOST=0.9979;RSQ=0.8126;ERATE=0.0004;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234243794 . G GA 37 PASS INDEL;BAVGPOST=0.995;BRSQ=0.316;LDAF=0.0117;AVGPOST=0.9847;RSQ=0.4521;ERATE=0.0019;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234243901 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0061;AVGPOST=0.9976;RSQ=0.8765;ERATE=0.0003;THETA=0.0016;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234243909 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.716;LDAF=0.0068;AVGPOST=0.9957;RSQ=0.7601;ERATE=0.0004;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234243966 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.933;BRSQ=0.736;LDAF=0.1400;AVGPOST=0.9299;RSQ=0.7906;ERATE=0.0017;THETA=0.0010;AC=285;AN=2184 GT:DS:GL:BD 0.13049451 0
1 234243976 . A AT 35 PASS INDEL;BAVGPOST=0.977;BRSQ=0.133;LDAF=0.0989;AVGPOST=0.8640;RSQ=0.4062;ERATE=0.0069;THETA=0.0003;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 234243991 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.854;BRSQ=0.215;LDAF=0.1635;AVGPOST=0.8542;RSQ=0.6018;ERATE=0.0054;THETA=0.0003;AC=301;AN=2184 GT:DS:GL:BD 0.13782051 0
1 234244018 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.929;BRSQ=0.075;LDAF=0.0604;AVGPOST=0.9433;RSQ=0.6230;ERATE=0.0021;THETA=0.0004;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 234244026 . AT A 262 PASS INDEL;BAVGPOST=0.860;BRSQ=0.084;LDAF=0.1720;AVGPOST=0.7527;RSQ=0.2940;ERATE=0.0174;THETA=0.0005;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 234244031 . T TTA 6569 PASS INDEL;BAVGPOST=0.791;BRSQ=0.620;LDAF=0.5973;AVGPOST=0.7948;RSQ=0.6735;ERATE=0.0056;THETA=0.0004;AC=1334;AN=2184 GT:DS:GL:BD 0.61080587 1
1 234244032 . T TAN 1635 PASS INDEL;BAVGPOST=0.709;BRSQ=0.504;LDAF=0.5826;AVGPOST=0.8352;RSQ=0.7439;ERATE=0.0018;THETA=0.0006;AC=1318;AN=2184 GT:DS:GL:BD 0.60347986 1
1 234244038 rs59253152 T TATA 1998 PASS INDEL;BAVGPOST=0.750;BRSQ=0.561;LDAF=0.5722;AVGPOST=0.7500;RSQ=0.5988;ERATE=0.0121;THETA=0.0007;AC=1315;AN=2184 GT:DS:GL:BD 0.60210621 1
1 234244086 . TA T 96 PASS INDEL;BAVGPOST=0.866;BRSQ=0.043;LDAF=0.1151;AVGPOST=0.8318;RSQ=0.3399;ERATE=0.0083;THETA=0.0006;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 234244087 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.806;BRSQ=0.067;LDAF=0.1882;AVGPOST=0.7436;RSQ=0.3206;ERATE=0.0136;THETA=0.0029;AC=212;AN=2184 GT:DS:GL:BD 0.09706960 0
1 234244109 rs71574899 T TAAAA 921 PASS INDEL;BAVGPOST=0.738;BRSQ=0.042;LDAF=0.2226;AVGPOST=0.6968;RSQ=0.2586;ERATE=0.0219;THETA=0.0004;AC=250;AN=2184 GT:DS:GL:BD 0.11446887 0
1 234244179 . G GAT 399 PASS INDEL;BAVGPOST=0.851;BRSQ=0.029;LDAF=0.1420;AVGPOST=0.7973;RSQ=0.3413;ERATE=0.0075;THETA=0.0011;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 234244191 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.835;BRSQ=0.051;LDAF=0.1602;AVGPOST=0.7764;RSQ=0.3188;ERATE=0.0120;THETA=0.0011;AC=162;AN=2184 GT:DS:GL:BD 0.07417583 0
1 234244218 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.920;BRSQ=0.021;LDAF=0.1251;AVGPOST=0.8251;RSQ=0.3655;ERATE=0.0063;THETA=0.0005;AC=151;AN=2184 GT:DS:GL:BD 0.06913920 0
1 234244224 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.895;BRSQ=0.053;LDAF=0.1178;AVGPOST=0.8176;RSQ=0.2963;ERATE=0.0076;THETA=0.0016;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 234244242 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.907;BRSQ=0.066;LDAF=0.0996;AVGPOST=0.8939;RSQ=0.5413;ERATE=0.0047;THETA=0.0005;AC=167;AN=2184 GT:DS:GL:BD 0.07646520 0
1 234244258 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.604;BRSQ=0.095;LDAF=0.2409;AVGPOST=0.6948;RSQ=0.3060;ERATE=0.0189;THETA=0.0003;AC=298;AN=2184 GT:DS:GL:BD 0.13644689 0
1 234244271 rs59972679 T TTA 585 PASS INDEL;BAVGPOST=0.745;BRSQ=0.033;LDAF=0.2192;AVGPOST=0.6924;RSQ=0.2660;ERATE=0.0167;THETA=0.0003;AC=230;AN=2184 GT:DS:GL:BD 0.10531136 0
1 234244284 . ATATATAT A 32 PASS INDEL;BAVGPOST=0.880;BRSQ=0.023;LDAF=0.0947;AVGPOST=0.8589;RSQ=0.3662;ERATE=0.0054;THETA=0.0013;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 234244286 rs72048724 ATATATTATT A 163 PASS INDEL;BAVGPOST=0.845;BRSQ=0.025;LDAF=0.1375;AVGPOST=0.7971;RSQ=0.3128;ERATE=0.0085;THETA=0.0004;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 234244339 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.870;BRSQ=0.060;LDAF=0.1548;AVGPOST=0.7839;RSQ=0.3415;ERATE=0.0085;THETA=0.0015;AC=188;AN=2184 GT:DS:GL:BD 0.08608059 0
1 234244373 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.914;BRSQ=0.063;LDAF=0.1160;AVGPOST=0.8132;RSQ=0.2550;ERATE=0.0128;THETA=0.0004;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 234244410 . TA T 1247 PASS INDEL;BAVGPOST=0.764;BRSQ=0.110;LDAF=0.1824;AVGPOST=0.8627;RSQ=0.6461;ERATE=0.0041;THETA=0.0021;AC=310;AN=2184 GT:DS:GL:BD 0.14194140 0
1 234244472 . AAT A 236 PASS INDEL;BAVGPOST=0.752;BRSQ=0.114;LDAF=0.2325;AVGPOST=0.7640;RSQ=0.4724;ERATE=0.0102;THETA=0.0006;AC=371;AN=2184 GT:DS:GL:BD 0.16987179 0
1 234244473 rs56911999 AT A 796 PASS INDEL;BAVGPOST=0.783;BRSQ=0.246;LDAF=0.1980;AVGPOST=0.8435;RSQ=0.6039;ERATE=0.0065;THETA=0.0002;AC=343;AN=2184 GT:DS:GL:BD 0.15705128 0
1 234244486 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.715;BRSQ=0.171;LDAF=0.3193;AVGPOST=0.6512;RSQ=0.3037;ERATE=0.0329;THETA=0.0007;AC=464;AN=2184 GT:DS:GL:BD 0.21245421 0
1 234244508 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.774;BRSQ=0.111;LDAF=0.2258;AVGPOST=0.6916;RSQ=0.2660;ERATE=0.0282;THETA=0.0007;AC=233;AN=2184 GT:DS:GL:BD 0.10668498 0
1 234244508 rs71848027 AAT A 5441 PASS INDEL;BAVGPOST=0.950;BRSQ=0.016;LDAF=0.9380;AVGPOST=0.9197;RSQ=0.4758;ERATE=0.0023;THETA=0.0003;AC=2088;AN=2184 GT:DS:GL:BD 0.95604396 1
1 234244550 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.211;LDAF=0.0215;AVGPOST=0.9689;RSQ=0.4213;ERATE=0.0020;THETA=0.0007;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 234244579 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3077;AVGPOST=0.9958;RSQ=0.9943;ERATE=0.0005;THETA=0.0002;AC=674;AN=2184 GT:DS:GL:BD 0.30860806 0
1 234244643 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3078;AVGPOST=0.9981;RSQ=0.9975;ERATE=0.0005;THETA=0.0005;AC=674;AN=2184 GT:DS:GL:BD 0.30860806 0
1 234244669 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.670;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4187;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234244750 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.695;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234244763 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4872;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234244766 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3076;AVGPOST=0.9985;RSQ=0.9981;ERATE=0.0004;THETA=0.0016;AC=673;AN=2184 GT:DS:GL:BD 0.30815017 0
1 234244838 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8372;ERATE=0.0004;THETA=0.0024;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234244886 . A AT 2447 PASS INDEL;BAVGPOST=0.994;BRSQ=0.973;LDAF=0.0857;AVGPOST=0.9884;RSQ=0.9466;ERATE=0.0011;THETA=0.0005;AC=182;AN=2184 GT:DS:GL:BD 0.08333334 0
1 234244888 . T TG 12045 PASS INDEL;BAVGPOST=0.996;BRSQ=0.984;LDAF=0.0804;AVGPOST=0.9968;RSQ=0.9843;ERATE=0.0005;THETA=0.0004;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 234244890 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3084;AVGPOST=0.9972;RSQ=0.9963;ERATE=0.0005;THETA=0.0008;AC=674;AN=2184 GT:DS:GL:BD 0.30860806 0
1 234244912 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3076;AVGPOST=0.9981;RSQ=0.9976;ERATE=0.0004;THETA=0.0006;AC=673;AN=2184 GT:DS:GL:BD 0.30815017 0
1 234244960 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0183;AVGPOST=0.9982;RSQ=0.9618;ERATE=0.0003;THETA=0.0010;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 234245054 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3076;AVGPOST=0.9993;RSQ=0.9990;ERATE=0.0003;THETA=0.0004;AC=673;AN=2184 GT:DS:GL:BD 0.30815017 0
1 234245291 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9181;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234245382 rs35374005 TAGGG T 138 PASS INDEL;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9721;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234245419 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234245421 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234245433 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234245443 . ACTGT A 135 PASS INDEL;BAVGPOST=0.999;BRSQ=0.791;LDAF=0.0028;AVGPOST=0.9973;RSQ=0.6229;ERATE=0.0007;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234245456 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7783;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234245573 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234245611 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5383;AVGPOST=0.9980;RSQ=0.9971;ERATE=0.0006;THETA=0.0002;AC=1177;AN=2184 GT:DS:GL:BD 0.53891939 1
1 234245632 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8379;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234245646 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0039;AVGPOST=0.9982;RSQ=0.7984;ERATE=0.0004;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234245647 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1250;AVGPOST=0.9995;RSQ=0.9978;ERATE=0.0004;THETA=0.0003;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 234245705 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6398;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234245706 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.982;LDAF=0.1605;AVGPOST=0.9957;RSQ=0.9878;ERATE=0.0004;THETA=0.0008;AC=350;AN=2184 GT:DS:GL:BD 0.16025642 0
1 234245718 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6856;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234245771 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6244;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234245783 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5874;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234245801 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0143;AVGPOST=0.9987;RSQ=0.9596;ERATE=0.0003;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 234245806 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7309;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234245859 rs71170461 T TGAG 110335 PASS INDEL;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.6896;AVGPOST=0.9931;RSQ=0.9883;ERATE=0.0006;THETA=0.0006;AC=1508;AN=2184 GT:DS:GL:BD 0.69047618 1
1 234246080 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.6283;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234246121 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0066;AVGPOST=0.9995;RSQ=0.9690;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234246173 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9187;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234246195 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234246304 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8879;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234246436 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0757;AVGPOST=0.9992;RSQ=0.9958;ERATE=0.0003;THETA=0.0005;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 234246477 rs58476451 AT A 45956 PASS INDEL;BAVGPOST=0.993;BRSQ=0.988;LDAF=0.3071;AVGPOST=0.9971;RSQ=0.9960;ERATE=0.0006;THETA=0.0007;AC=672;AN=2184 GT:DS:GL:BD 0.30769232 0
1 234246480 . TG T 7124 PASS INDEL;BAVGPOST=0.955;BRSQ=0.926;LDAF=0.3073;AVGPOST=0.9503;RSQ=0.9331;ERATE=0.0026;THETA=0.0006;AC=679;AN=2184 GT:DS:GL:BD 0.31089744 0
1 234246497 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7987;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234246703 . CTTAT C 45 PASS INDEL;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5771;ERATE=0.0005;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234246707 . T TA 156 PASS INDEL;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0040;AVGPOST=0.9984;RSQ=0.8395;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234246713 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0224;AVGPOST=0.9995;RSQ=0.9905;ERATE=0.0003;THETA=0.0012;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 234246770 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9996;RSQ=0.9601;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234246903 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.771;LDAF=0.0106;AVGPOST=0.9988;RSQ=0.9518;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234246981 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.726;LDAF=0.0042;AVGPOST=0.9989;RSQ=0.9098;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234247007 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234247059 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0214;AVGPOST=0.9952;RSQ=0.9229;ERATE=0.0005;THETA=0.0033;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 234247067 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0075;AVGPOST=0.9987;RSQ=0.9257;ERATE=0.0004;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234247068 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.984;LDAF=0.2983;AVGPOST=0.9931;RSQ=0.9913;ERATE=0.0004;THETA=0.0006;AC=653;AN=2184 GT:DS:GL:BD 0.29899266 0
1 234247138 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.846;LDAF=0.0058;AVGPOST=0.9972;RSQ=0.7907;ERATE=0.0006;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234247147 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.649;LDAF=0.0096;AVGPOST=0.9910;RSQ=0.6357;ERATE=0.0008;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 234247173 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0062;AVGPOST=0.9985;RSQ=0.9056;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234247228 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.672;LDAF=0.0026;AVGPOST=0.9973;RSQ=0.5477;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234247290 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7217;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234247294 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.970;LDAF=0.2990;AVGPOST=0.9874;RSQ=0.9841;ERATE=0.0007;THETA=0.0005;AC=659;AN=2184 GT:DS:GL:BD 0.30173993 0
1 234247326 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.984;LDAF=0.4371;AVGPOST=0.9954;RSQ=0.9938;ERATE=0.0008;THETA=0.0004;AC=958;AN=2184 GT:DS:GL:BD 0.43864468 0
1 234247340 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.3068;AVGPOST=0.9972;RSQ=0.9968;ERATE=0.0004;THETA=0.0003;AC=673;AN=2184 GT:DS:GL:BD 0.30815017 0
1 234247503 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234247567 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0070;AVGPOST=0.9997;RSQ=0.9779;ERATE=0.0003;THETA=0.0013;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234247746 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3108;AVGPOST=0.9985;RSQ=0.9979;ERATE=0.0004;THETA=0.0004;AC=680;AN=2184 GT:DS:GL:BD 0.31135532 0
1 234247898 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.728;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.6267;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234247932 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0063;AVGPOST=0.9994;RSQ=0.9512;ERATE=0.0004;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234247953 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.758;LDAF=0.0037;AVGPOST=0.9982;RSQ=0.7746;ERATE=0.0006;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234247964 . G GTGCATGCC 1485 PASS INDEL;BAVGPOST=0.997;BRSQ=0.704;LDAF=0.0108;AVGPOST=0.9930;RSQ=0.7737;ERATE=0.0004;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 234248019 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1277;AVGPOST=0.9988;RSQ=0.9959;ERATE=0.0004;THETA=0.0005;AC=278;AN=2184 GT:DS:GL:BD 0.12728938 0
1 234248108 . C CA 28 PASS INDEL;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0025;AVGPOST=0.9978;RSQ=0.6529;ERATE=0.0005;THETA=0.0053;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234248130 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0019;AVGPOST=0.9994;RSQ=0.8577;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234248164 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.885;LDAF=0.0167;AVGPOST=0.9979;RSQ=0.9454;ERATE=0.0003;THETA=0.0004;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 234248215 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3072;AVGPOST=0.9992;RSQ=0.9989;ERATE=0.0004;THETA=0.0006;AC=672;AN=2184 GT:DS:GL:BD 0.30769232 0
1 234248450 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.880;LDAF=0.1247;AVGPOST=0.9805;RSQ=0.9338;ERATE=0.0013;THETA=0.0005;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 234248468 . A ATT 1185 PASS INDEL;BAVGPOST=0.598;BRSQ=0.087;LDAF=0.6723;AVGPOST=0.6527;RSQ=0.3169;ERATE=0.0300;THETA=0.0005;AC=1598;AN=2184 GT:DS:GL:BD 0.73168498 1
1 234248533 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.627;LDAF=0.0048;AVGPOST=0.9974;RSQ=0.7762;ERATE=0.0004;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234248601 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.892;LDAF=0.0107;AVGPOST=0.9955;RSQ=0.8200;ERATE=0.0009;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 234248643 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0059;AVGPOST=0.9977;RSQ=0.8392;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234248674 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6474;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234248698 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.697;LDAF=0.0356;AVGPOST=0.9892;RSQ=0.8848;ERATE=0.0004;THETA=0.0003;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 234248734 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.4652;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234248755 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0062;AVGPOST=0.9995;RSQ=0.9649;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234248865 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7194;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234248941 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.6097;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234248987 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7966;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234249181 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.1194;AVGPOST=0.9998;RSQ=0.9991;ERATE=0.0003;THETA=0.0004;AC=260;AN=2184 GT:DS:GL:BD 0.11904762 0
1 234249224 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234249318 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6102;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234249320 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.3070;AVGPOST=0.9992;RSQ=0.9989;ERATE=0.0003;THETA=0.0003;AC=672;AN=2184 GT:DS:GL:BD 0.30769232 0
1 234249332 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4607;AVGPOST=0.9979;RSQ=0.9972;ERATE=0.0004;THETA=0.0004;AC=1008;AN=2184 GT:DS:GL:BD 0.46153846 0
1 234249397 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.632;LDAF=0.0210;AVGPOST=0.9757;RSQ=0.5637;ERATE=0.0042;THETA=0.0006;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 234249482 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.1277;AVGPOST=0.9986;RSQ=0.9953;ERATE=0.0003;THETA=0.0002;AC=277;AN=2184 GT:DS:GL:BD 0.12683150 0
1 234249495 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7173;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234249534 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4749;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234249601 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.853;LDAF=0.0117;AVGPOST=0.9931;RSQ=0.7587;ERATE=0.0020;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234249602 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0750;AVGPOST=0.9994;RSQ=0.9961;ERATE=0.0003;THETA=0.0006;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 234249605 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8736;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234249790 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3071;AVGPOST=0.9996;RSQ=0.9995;ERATE=0.0003;THETA=0.0005;AC=672;AN=2184 GT:DS:GL:BD 0.30769232 0
1 234250079 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3071;AVGPOST=0.9992;RSQ=0.9988;ERATE=0.0004;THETA=0.0032;AC=672;AN=2184 GT:DS:GL:BD 0.30769232 0
1 234250088 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4672;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234250109 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0072;AVGPOST=0.9993;RSQ=0.9657;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234250165 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.747;LDAF=0.0040;AVGPOST=0.9992;RSQ=0.9077;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234250193 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234250218 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1245;AVGPOST=0.9988;RSQ=0.9954;ERATE=0.0003;THETA=0.0004;AC=270;AN=2184 GT:DS:GL:BD 0.12362637 0
1 234250223 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3071;AVGPOST=0.9971;RSQ=0.9964;ERATE=0.0004;THETA=0.0003;AC=672;AN=2184 GT:DS:GL:BD 0.30769232 0
1 234250281 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4625;AVGPOST=0.9976;RSQ=0.9966;ERATE=0.0004;THETA=0.0004;AC=1011;AN=2184 GT:DS:GL:BD 0.46291208 0
1 234250304 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4638;AVGPOST=0.9959;RSQ=0.9947;ERATE=0.0006;THETA=0.0004;AC=1012;AN=2184 GT:DS:GL:BD 0.46336997 0
1 234250378 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5540;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234250494 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0213;AVGPOST=0.9995;RSQ=0.9899;ERATE=0.0004;THETA=0.0002;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 234251160 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.704;LDAF=0.0045;AVGPOST=0.9977;RSQ=0.8175;ERATE=0.0006;THETA=0.0043;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234251194 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.805;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8664;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234251302 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.6698;ERATE=0.0005;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234251390 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234251568 . CTT C 454 PASS INDEL;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234251570 . TATCTC T 16463 PASS INDEL;BAVGPOST=0.994;BRSQ=0.961;LDAF=0.0737;AVGPOST=0.9979;RSQ=0.9905;ERATE=0.0004;THETA=0.0005;AC=162;AN=2184 GT:DS:GL:BD 0.07417583 0
1 234251639 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6592;AVGPOST=0.9976;RSQ=0.9966;ERATE=0.0003;THETA=0.0002;AC=1440;AN=2184 GT:DS:GL:BD 0.65934068 1
1 234251661 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8686;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234251720 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.895;LDAF=0.0347;AVGPOST=0.9968;RSQ=0.9656;ERATE=0.0005;THETA=0.0004;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 234251744 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234251799 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7566;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234251910 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.808;LDAF=0.0039;AVGPOST=0.9990;RSQ=0.9064;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234251914 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.871;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9133;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234251966 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4579;AVGPOST=0.9957;RSQ=0.9947;ERATE=0.0004;THETA=0.0002;AC=1003;AN=2184 GT:DS:GL:BD 0.45924908 0
1 234252029 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0088;AVGPOST=0.9995;RSQ=0.9734;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 234252097 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9558;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234252101 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3067;AVGPOST=0.9989;RSQ=0.9984;ERATE=0.0004;THETA=0.0003;AC=671;AN=2184 GT:DS:GL:BD 0.30723444 0
1 234252113 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234252227 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0756;AVGPOST=0.9974;RSQ=0.9864;ERATE=0.0005;THETA=0.0005;AC=163;AN=2184 GT:DS:GL:BD 0.07463370 0
1 234252240 rs35352230 AT A 7399 PASS INDEL;BAVGPOST=0.994;BRSQ=0.977;LDAF=0.1239;AVGPOST=0.9930;RSQ=0.9761;ERATE=0.0007;THETA=0.0006;AC=267;AN=2184 GT:DS:GL:BD 0.12225275 0
1 234252251 . T TTTTA 410 PASS INDEL;BAVGPOST=0.996;BRSQ=0.678;LDAF=0.0051;AVGPOST=0.9974;RSQ=0.7843;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234252267 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.894;BRSQ=0.812;LDAF=0.2628;AVGPOST=0.8680;RSQ=0.8102;ERATE=0.0178;THETA=0.0004;AC=573;AN=2184 GT:DS:GL:BD 0.26236263 0
1 234252267 . A AT 133 PASS INDEL;BAVGPOST=0.959;BRSQ=0.317;LDAF=0.0320;AVGPOST=0.9554;RSQ=0.4554;ERATE=0.0011;THETA=0.0001;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 234252284 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.515;LDAF=0.0034;AVGPOST=0.9960;RSQ=0.4735;ERATE=0.0009;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234252314 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.955;LDAF=0.2971;AVGPOST=0.9828;RSQ=0.9780;ERATE=0.0007;THETA=0.0004;AC=657;AN=2184 GT:DS:GL:BD 0.30082417 0
1 234252318 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.918;BRSQ=0.583;LDAF=0.0964;AVGPOST=0.9457;RSQ=0.8061;ERATE=0.0005;THETA=0.0008;AC=190;AN=2184 GT:DS:GL:BD 0.08699634 0
1 234252344 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.864;LDAF=0.0077;AVGPOST=0.9951;RSQ=0.7222;ERATE=0.0006;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234252526 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.834;LDAF=0.0046;AVGPOST=0.9990;RSQ=0.9033;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234252665 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5883;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234252718 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.3054;AVGPOST=0.9983;RSQ=0.9977;ERATE=0.0004;THETA=0.0003;AC=669;AN=2184 GT:DS:GL:BD 0.30631867 0
1 234252826 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3068;AVGPOST=0.9994;RSQ=0.9991;ERATE=0.0003;THETA=0.0005;AC=671;AN=2184 GT:DS:GL:BD 0.30723444 0
1 234253034 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6883;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234253128 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.5278;AVGPOST=0.9977;RSQ=0.9965;ERATE=0.0006;THETA=0.0005;AC=1153;AN=2184 GT:DS:GL:BD 0.52793038 1
1 234253199 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.694;LDAF=0.0089;AVGPOST=0.9894;RSQ=0.5662;ERATE=0.0006;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234253212 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5407;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234253218 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8551;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234253220 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.3074;AVGPOST=0.9983;RSQ=0.9977;ERATE=0.0005;THETA=0.0001;AC=671;AN=2184 GT:DS:GL:BD 0.30723444 0
1 234253248 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.968;LDAF=0.2968;AVGPOST=0.9867;RSQ=0.9822;ERATE=0.0003;THETA=0.0009;AC=656;AN=2184 GT:DS:GL:BD 0.30036631 0
1 234253269 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.968;LDAF=0.4406;AVGPOST=0.9808;RSQ=0.9739;ERATE=0.0013;THETA=0.0004;AC=968;AN=2184 GT:DS:GL:BD 0.44322345 0
1 234253292 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.570;LDAF=0.0079;AVGPOST=0.9910;RSQ=0.5432;ERATE=0.0020;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234253406 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0215;AVGPOST=0.9992;RSQ=0.9832;ERATE=0.0003;THETA=0.0002;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 234253460 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.476;LDAF=0.0176;AVGPOST=0.9920;RSQ=0.8152;ERATE=0.0006;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 234253491 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.636;LDAF=0.0026;AVGPOST=0.9956;RSQ=0.3272;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234253556 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.964;BRSQ=0.837;LDAF=0.1161;AVGPOST=0.9767;RSQ=0.9175;ERATE=0.0015;THETA=0.0003;AC=254;AN=2184 GT:DS:GL:BD 0.11630037 0
1 234253660 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.842;BRSQ=0.597;LDAF=0.2020;AVGPOST=0.8487;RSQ=0.6908;ERATE=0.0189;THETA=0.0002;AC=409;AN=2184 GT:DS:GL:BD 0.18727106 0
1 234253723 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.933;LDAF=0.1206;AVGPOST=0.9874;RSQ=0.9594;ERATE=0.0011;THETA=0.0002;AC=261;AN=2184 GT:DS:GL:BD 0.11950549 0
1 234253923 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9576;ERATE=0.0003;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234253984 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.987;LDAF=0.1455;AVGPOST=0.9989;RSQ=0.9962;ERATE=0.0003;THETA=0.0004;AC=317;AN=2184 GT:DS:GL:BD 0.14514652 0
1 234253987 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.992;LDAF=0.3722;AVGPOST=0.9984;RSQ=0.9976;ERATE=0.0003;THETA=0.0004;AC=811;AN=2184 GT:DS:GL:BD 0.37133700 0
1 234254061 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234254088 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.3066;AVGPOST=0.9994;RSQ=0.9991;ERATE=0.0003;THETA=0.0009;AC=671;AN=2184 GT:DS:GL:BD 0.30723444 0
1 234254182 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0056;AVGPOST=0.9976;RSQ=0.8446;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234254225 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6915;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234254306 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.994;LDAF=0.3059;AVGPOST=0.9985;RSQ=0.9982;ERATE=0.0004;THETA=0.0002;AC=670;AN=2184 GT:DS:GL:BD 0.30677655 0
1 234254343 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.738;LDAF=0.0021;AVGPOST=0.9987;RSQ=0.7949;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234254400 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1309;AVGPOST=0.9989;RSQ=0.9962;ERATE=0.0003;THETA=0.0004;AC=285;AN=2184 GT:DS:GL:BD 0.13049451 0
1 234254435 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3069;AVGPOST=0.9993;RSQ=0.9990;ERATE=0.0004;THETA=0.0006;AC=671;AN=2184 GT:DS:GL:BD 0.30723444 0
1 234254659 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1318;AVGPOST=0.9981;RSQ=0.9932;ERATE=0.0004;THETA=0.0007;AC=287;AN=2184 GT:DS:GL:BD 0.13141026 0
1 234254686 . AC A 50 PASS INDEL;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234254726 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234254842 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5760;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234254852 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.774;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9294;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234255003 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3065;AVGPOST=0.9979;RSQ=0.9973;ERATE=0.0004;THETA=0.0006;AC=671;AN=2184 GT:DS:GL:BD 0.30723444 0
1 234255023 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1455;AVGPOST=0.9993;RSQ=0.9975;ERATE=0.0004;THETA=0.0002;AC=317;AN=2184 GT:DS:GL:BD 0.14514652 0
1 234255178 . TA T 328 PASS INDEL;BAVGPOST=0.999;BRSQ=0.758;LDAF=0.0043;AVGPOST=0.9957;RSQ=0.5817;ERATE=0.0006;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234255219 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.986;LDAF=0.1466;AVGPOST=0.9967;RSQ=0.9889;ERATE=0.0007;THETA=0.0002;AC=317;AN=2184 GT:DS:GL:BD 0.14514652 0
1 234255292 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6112;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234255370 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1162;AVGPOST=0.9991;RSQ=0.9970;ERATE=0.0003;THETA=0.0005;AC=254;AN=2184 GT:DS:GL:BD 0.11630037 0
1 234255445 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0048;AVGPOST=0.9975;RSQ=0.7804;ERATE=0.0005;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234255457 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8178;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234255479 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3069;AVGPOST=0.9994;RSQ=0.9991;ERATE=0.0004;THETA=0.0007;AC=671;AN=2184 GT:DS:GL:BD 0.30723444 0
1 234255558 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234255603 . T TCG 132 PASS INDEL;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6464;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234255604 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0027;AVGPOST=0.9998;RSQ=0.9690;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234255826 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0741;AVGPOST=0.9995;RSQ=0.9971;ERATE=0.0003;THETA=0.0003;AC=162;AN=2184 GT:DS:GL:BD 0.07417583 0
1 234255981 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.959;LDAF=0.0243;AVGPOST=0.9980;RSQ=0.9724;ERATE=0.0003;THETA=0.0004;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 234256003 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8824;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234256057 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.985;LDAF=0.1195;AVGPOST=0.9964;RSQ=0.9884;ERATE=0.0006;THETA=0.0017;AC=261;AN=2184 GT:DS:GL:BD 0.11950549 0
1 234256094 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0003;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234256173 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.7167;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234256264 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8366;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234256604 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3013;AVGPOST=0.9997;RSQ=0.9995;ERATE=0.0003;THETA=0.0003;AC=659;AN=2184 GT:DS:GL:BD 0.30173993 0
1 234256649 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3013;AVGPOST=0.9992;RSQ=0.9988;ERATE=0.0004;THETA=0.0003;AC=659;AN=2184 GT:DS:GL:BD 0.30173993 0
1 234256707 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0270;AVGPOST=0.9999;RSQ=0.9977;ERATE=0.0003;THETA=0.0020;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 234256967 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0063;AVGPOST=0.9977;RSQ=0.8264;ERATE=0.0006;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234256984 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.964;BRSQ=0.941;LDAF=0.4314;AVGPOST=0.9447;RSQ=0.9291;ERATE=0.0047;THETA=0.0003;AC=959;AN=2184 GT:DS:GL:BD 0.43910256 0
1 234257127 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.948;LDAF=0.1382;AVGPOST=0.9653;RSQ=0.8937;ERATE=0.0034;THETA=0.0006;AC=285;AN=2184 GT:DS:GL:BD 0.13049451 0
1 234257136 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.913;LDAF=0.0271;AVGPOST=0.9929;RSQ=0.9015;ERATE=0.0008;THETA=0.0001;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 234257184 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2931;AVGPOST=0.9939;RSQ=0.9913;ERATE=0.0009;THETA=0.0007;AC=640;AN=2184 GT:DS:GL:BD 0.29304031 0
1 234257299 . CT C 307 PASS INDEL;BAVGPOST=0.996;BRSQ=0.777;LDAF=0.0159;AVGPOST=0.9830;RSQ=0.5973;ERATE=0.0010;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 234257322 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.860;LDAF=0.0093;AVGPOST=0.9958;RSQ=0.8316;ERATE=0.0006;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 234257336 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.792;LDAF=0.0183;AVGPOST=0.9957;RSQ=0.9086;ERATE=0.0005;THETA=0.0002;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 234257450 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0057;AVGPOST=0.9995;RSQ=0.9632;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234257480 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.816;LDAF=0.0077;AVGPOST=0.9930;RSQ=0.6565;ERATE=0.0006;THETA=0.0008;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234257497 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.979;LDAF=0.0571;AVGPOST=0.9979;RSQ=0.9872;ERATE=0.0003;THETA=0.0002;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 234257564 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.709;LDAF=0.0014;AVGPOST=0.9979;RSQ=0.4695;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234257616 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7941;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234257680 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.925;LDAF=0.1115;AVGPOST=0.9941;RSQ=0.9772;ERATE=0.0006;THETA=0.0004;AC=247;AN=2184 GT:DS:GL:BD 0.11309524 0
1 234257704 rs67882784 TATCA T 7608 PASS INDEL;BAVGPOST=0.820;BRSQ=0.643;LDAF=0.2469;AVGPOST=0.8441;RSQ=0.7391;ERATE=0.0189;THETA=0.0003;AC=563;AN=2184 GT:DS:GL:BD 0.25778389 0
1 234257748 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0027;AVGPOST=0.9984;RSQ=0.7419;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234257838 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9996;RSQ=0.9642;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234258035 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1146;AVGPOST=0.9995;RSQ=0.9980;ERATE=0.0003;THETA=0.0003;AC=250;AN=2184 GT:DS:GL:BD 0.11446887 0
1 234258077 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0005;AVGPOST=0.9993;RSQ=0.4577;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234258171 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9401;ERATE=0.0003;THETA=0.0024;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234258208 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.2276;AVGPOST=0.9973;RSQ=0.9943;ERATE=0.0004;THETA=0.0005;AC=498;AN=2184 GT:DS:GL:BD 0.22802198 0
1 234258237 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1151;AVGPOST=0.9993;RSQ=0.9972;ERATE=0.0003;THETA=0.0003;AC=251;AN=2184 GT:DS:GL:BD 0.11492674 0
1 234258275 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.949;LDAF=0.4197;AVGPOST=0.9709;RSQ=0.9607;ERATE=0.0046;THETA=0.0003;AC=934;AN=2184 GT:DS:GL:BD 0.42765567 0
1 234258352 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7233;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234258380 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.4431;AVGPOST=0.9963;RSQ=0.9947;ERATE=0.0006;THETA=0.0002;AC=969;AN=2184 GT:DS:GL:BD 0.44368133 0
1 234258391 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.773;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8852;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234258531 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.762;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8141;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234258535 . G GC 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5077;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234258569 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.768;LDAF=0.0209;AVGPOST=0.9900;RSQ=0.8009;ERATE=0.0011;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 234258592 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0054;AVGPOST=0.9990;RSQ=0.9243;ERATE=0.0003;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234258790 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.987;LDAF=0.6389;AVGPOST=0.9879;RSQ=0.9819;ERATE=0.0022;THETA=0.0006;AC=1400;AN=2184 GT:DS:GL:BD 0.64102566 1
1 234258793 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6637;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234258889 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9357;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234258947 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.983;LDAF=0.1073;AVGPOST=0.9980;RSQ=0.9929;ERATE=0.0003;THETA=0.0004;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 234259135 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.2919;AVGPOST=0.9989;RSQ=0.9985;ERATE=0.0003;THETA=0.0005;AC=639;AN=2184 GT:DS:GL:BD 0.29258242 0
1 234259150 rs113319643 A ATGTTT 1100 PASS INDEL;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0056;AVGPOST=0.9996;RSQ=0.9650;ERATE=0.0004;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234259195 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234259333 . T TTTTG 7089 PASS INDEL;BAVGPOST=0.791;BRSQ=0.527;LDAF=0.2805;AVGPOST=0.7780;RSQ=0.5416;ERATE=0.0579;THETA=0.0005;AC=503;AN=2184 GT:DS:GL:BD 0.23031135 0
1 234259580 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234259581 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234259673 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6526;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234259790 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4382;AVGPOST=0.9985;RSQ=0.9977;ERATE=0.0007;THETA=0.0002;AC=958;AN=2184 GT:DS:GL:BD 0.43864468 0
1 234259825 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.1262;AVGPOST=0.9991;RSQ=0.9964;ERATE=0.0004;THETA=0.0003;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 234259912 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6066;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234259972 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9682;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234259978 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5729;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234259979 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234260041 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8090;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234260076 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234260086 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6464;AVGPOST=0.9994;RSQ=0.9990;ERATE=0.0003;THETA=0.0003;AC=1412;AN=2184 GT:DS:GL:BD 0.64652014 1
1 234260127 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234260217 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0752;AVGPOST=0.9989;RSQ=0.9936;ERATE=0.0006;THETA=0.0003;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 234260458 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1471;AVGPOST=0.9985;RSQ=0.9950;ERATE=0.0005;THETA=0.0002;AC=321;AN=2184 GT:DS:GL:BD 0.14697802 0
1 234260474 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2912;AVGPOST=0.9993;RSQ=0.9990;ERATE=0.0003;THETA=0.0033;AC=637;AN=2184 GT:DS:GL:BD 0.29166666 0
1 234260491 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234260509 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0022;AVGPOST=0.9974;RSQ=0.6033;ERATE=0.0006;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234260573 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2915;AVGPOST=0.9991;RSQ=0.9990;ERATE=0.0003;THETA=0.0006;AC=637;AN=2184 GT:DS:GL:BD 0.29166666 0
1 234260598 rs35219693 CAA C 22836 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1149;AVGPOST=0.9984;RSQ=0.9947;ERATE=0.0004;THETA=0.0003;AC=250;AN=2184 GT:DS:GL:BD 0.11446887 0
1 234260600 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7345;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234260666 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0039;AVGPOST=0.9989;RSQ=0.8954;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234260843 . GTGGC G 92 PASS INDEL;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4537;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234260857 rs112194990 TCA T 5484 PASS INDEL;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0313;AVGPOST=0.9986;RSQ=0.9832;ERATE=0.0005;THETA=0.0003;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 234260918 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0022;AVGPOST=0.9995;RSQ=0.9047;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234260921 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234260990 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9095;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234260991 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6129;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234261031 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.972;LDAF=0.0136;AVGPOST=0.9993;RSQ=0.9768;ERATE=0.0003;THETA=0.0010;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 234261073 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.699;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7137;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234261079 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8854;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234261136 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6903;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234261194 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0742;AVGPOST=0.9996;RSQ=0.9974;ERATE=0.0003;THETA=0.0002;AC=162;AN=2184 GT:DS:GL:BD 0.07417583 0
1 234261277 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7551;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234261353 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0024;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234261466 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1923;AVGPOST=0.9988;RSQ=0.9968;ERATE=0.0003;THETA=0.0015;AC=419;AN=2184 GT:DS:GL:BD 0.19184981 0
1 234261751 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3939;AVGPOST=0.9981;RSQ=0.9974;ERATE=0.0005;THETA=0.0003;AC=861;AN=2184 GT:DS:GL:BD 0.39423078 0
1 234261839 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1138;AVGPOST=0.9992;RSQ=0.9966;ERATE=0.0004;THETA=0.0020;AC=247;AN=2184 GT:DS:GL:BD 0.11309524 0
1 234262068 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1138;AVGPOST=0.9989;RSQ=0.9964;ERATE=0.0004;THETA=0.0003;AC=247;AN=2184 GT:DS:GL:BD 0.11309524 0
1 234262120 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1527;AVGPOST=0.9998;RSQ=0.9992;ERATE=0.0003;THETA=0.0003;AC=333;AN=2184 GT:DS:GL:BD 0.15247253 0
1 234262176 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0340;AVGPOST=0.9990;RSQ=0.9894;ERATE=0.0004;THETA=0.0006;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 234262183 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5276;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234262283 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6560;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234262518 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0018;AVGPOST=0.9980;RSQ=0.6136;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234262546 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.4160;ERATE=0.0009;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234262568 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6572;ERATE=0.0005;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234262579 . C CT 123 PASS INDEL;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4347;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234262599 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234262610 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1133;AVGPOST=0.9995;RSQ=0.9980;ERATE=0.0003;THETA=0.0003;AC=247;AN=2184 GT:DS:GL:BD 0.11309524 0
1 234262989 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6728;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234263213 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1106;AVGPOST=0.9975;RSQ=0.9927;ERATE=0.0004;THETA=0.0004;AC=243;AN=2184 GT:DS:GL:BD 0.11126374 0
1 234263283 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.730;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6018;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234263334 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2922;AVGPOST=0.9969;RSQ=0.9959;ERATE=0.0005;THETA=0.0009;AC=640;AN=2184 GT:DS:GL:BD 0.29304031 0
1 234263478 . CT C 9277 PASS INDEL;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.0734;AVGPOST=0.9969;RSQ=0.9825;ERATE=0.0004;THETA=0.0018;AC=158;AN=2184 GT:DS:GL:BD 0.07234433 0
1 234263481 . TG T 406 PASS INDEL;BAVGPOST=0.966;BRSQ=0.708;LDAF=0.0981;AVGPOST=0.9242;RSQ=0.6604;ERATE=0.0051;THETA=0.0010;AC=165;AN=2184 GT:DS:GL:BD 0.07554945 0
1 234263490 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.5797;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234263501 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=1.0000;RSQ=0.9960;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234263502 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8845;ERATE=0.0005;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234263519 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1158;AVGPOST=0.9986;RSQ=0.9943;ERATE=0.0004;THETA=0.0006;AC=252;AN=2184 GT:DS:GL:BD 0.11538462 0
1 234263540 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0004;AVGPOST=0.9994;RSQ=0.4653;ERATE=0.0003;THETA=0.0010;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 234263558 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7015;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234263562 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.4652;ERATE=0.0004;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234263730 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.705;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234263851 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0061;AVGPOST=0.9998;RSQ=0.9820;ERATE=0.0003;THETA=0.0009;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234263875 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3134;AVGPOST=0.9983;RSQ=0.9973;ERATE=0.0003;THETA=0.0004;AC=683;AN=2184 GT:DS:GL:BD 0.31272894 0
1 234263897 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3141;AVGPOST=0.9979;RSQ=0.9967;ERATE=0.0003;THETA=0.0074;AC=685;AN=2184 GT:DS:GL:BD 0.31364468 0
1 234263940 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234263993 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6262;ERATE=0.0003;THETA=0.0044;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234264007 . TG T 8187 PASS INDEL;BAVGPOST=0.945;BRSQ=0.894;LDAF=0.2657;AVGPOST=0.9355;RSQ=0.8988;ERATE=0.0066;THETA=0.0013;AC=585;AN=2184 GT:DS:GL:BD 0.26785713 0
1 234264008 rs11303008 GT G 48513 PASS INDEL;BAVGPOST=0.987;BRSQ=0.977;LDAF=0.3184;AVGPOST=0.9924;RSQ=0.9892;ERATE=0.0008;THETA=0.0003;AC=694;AN=2184 GT:DS:GL:BD 0.31776556 0
1 234264011 . TG T 7683 PASS INDEL;BAVGPOST=0.945;BRSQ=0.895;LDAF=0.2823;AVGPOST=0.9622;RSQ=0.9448;ERATE=0.0004;THETA=0.0022;AC=627;AN=2184 GT:DS:GL:BD 0.28708792 0
1 234264031 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0099;AVGPOST=0.9994;RSQ=0.9807;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 234264068 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0076;AVGPOST=0.9992;RSQ=0.9603;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234264078 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3222;AVGPOST=0.9981;RSQ=0.9974;ERATE=0.0003;THETA=0.0005;AC=702;AN=2184 GT:DS:GL:BD 0.32142857 0
1 234264091 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0107;AVGPOST=0.9984;RSQ=0.9478;ERATE=0.0003;THETA=0.0011;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234264120 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.981;LDAF=0.2677;AVGPOST=0.9918;RSQ=0.9884;ERATE=0.0005;THETA=0.0011;AC=586;AN=2184 GT:DS:GL:BD 0.26831502 0
1 234264186 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8771;ERATE=0.0003;THETA=0.0038;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234264194 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0081;AVGPOST=0.9984;RSQ=0.9357;ERATE=0.0003;THETA=0.0029;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 234264234 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0018;AVGPOST=0.9986;RSQ=0.7257;ERATE=0.0003;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234264280 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6164;ERATE=0.0006;THETA=0.0038;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234264309 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234264371 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0003;THETA=0.0069;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234264398 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0500;AVGPOST=0.9995;RSQ=0.9957;ERATE=0.0003;THETA=0.0004;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 234264472 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0717;AVGPOST=0.9988;RSQ=0.9942;ERATE=0.0003;THETA=0.0006;AC=157;AN=2184 GT:DS:GL:BD 0.07188645 0
1 234264531 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0218;AVGPOST=0.9992;RSQ=0.9853;ERATE=0.0003;THETA=0.0008;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 234264537 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2724;AVGPOST=0.9975;RSQ=0.9953;ERATE=0.0006;THETA=0.0003;AC=592;AN=2184 GT:DS:GL:BD 0.27106228 0
1 234264555 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2723;AVGPOST=0.9984;RSQ=0.9971;ERATE=0.0004;THETA=0.0019;AC=593;AN=2184 GT:DS:GL:BD 0.27152014 0
1 234264584 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2733;AVGPOST=0.9976;RSQ=0.9955;ERATE=0.0006;THETA=0.0004;AC=594;AN=2184 GT:DS:GL:BD 0.27197802 0
1 234264613 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0499;AVGPOST=0.9997;RSQ=0.9969;ERATE=0.0004;THETA=0.0061;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 234264787 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2517;AVGPOST=0.9982;RSQ=0.9970;ERATE=0.0004;THETA=0.0003;AC=546;AN=2184 GT:DS:GL:BD 0.25000000 0
1 234264826 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7702;ERATE=0.0003;THETA=0.0032;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234264837 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8599;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234264873 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7559;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234265063 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.3878;AVGPOST=0.9977;RSQ=0.9969;ERATE=0.0004;THETA=0.0004;AC=845;AN=2184 GT:DS:GL:BD 0.38690478 0
1 234265137 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2733;AVGPOST=0.9997;RSQ=0.9994;ERATE=0.0003;THETA=0.0029;AC=595;AN=2184 GT:DS:GL:BD 0.27243590 0
1 234265148 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0029;AVGPOST=0.9994;RSQ=0.9077;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234265246 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0004;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234265266 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=0.9989;RSQ=0.9156;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234265269 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2725;AVGPOST=0.9979;RSQ=0.9967;ERATE=0.0005;THETA=0.0003;AC=593;AN=2184 GT:DS:GL:BD 0.27152014 0
1 234265396 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0032;AVGPOST=0.9992;RSQ=0.8811;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234265427 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.0608;AVGPOST=0.9983;RSQ=0.9904;ERATE=0.0004;THETA=0.0005;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 234265547 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0444;AVGPOST=0.9998;RSQ=0.9976;ERATE=0.0003;THETA=0.0008;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 234265557 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5817;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234265558 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0017;AVGPOST=0.9979;RSQ=0.5980;ERATE=0.0004;THETA=0.0045;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234265651 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0448;AVGPOST=0.9988;RSQ=0.9913;ERATE=0.0003;THETA=0.0026;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 234265703 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.3253;AVGPOST=0.9960;RSQ=0.9939;ERATE=0.0007;THETA=0.0016;AC=711;AN=2184 GT:DS:GL:BD 0.32554945 0
1 234265806 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0239;AVGPOST=0.9987;RSQ=0.9799;ERATE=0.0003;THETA=0.0004;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 234265839 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234265898 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5417;ERATE=0.0004;THETA=0.0034;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234266037 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0225;AVGPOST=0.9998;RSQ=0.9955;ERATE=0.0003;THETA=0.0014;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 234266065 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2726;AVGPOST=0.9968;RSQ=0.9945;ERATE=0.0005;THETA=0.0006;AC=592;AN=2184 GT:DS:GL:BD 0.27106228 0
1 234266168 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.960;LDAF=0.2540;AVGPOST=0.9773;RSQ=0.9620;ERATE=0.0023;THETA=0.0007;AC=548;AN=2184 GT:DS:GL:BD 0.25091577 0
1 234266214 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.842;LDAF=0.0481;AVGPOST=0.9867;RSQ=0.8972;ERATE=0.0013;THETA=0.0007;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 234266342 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.924;LDAF=0.0186;AVGPOST=0.9963;RSQ=0.9294;ERATE=0.0003;THETA=0.0058;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 234266343 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.959;BRSQ=0.919;LDAF=0.2844;AVGPOST=0.9602;RSQ=0.9395;ERATE=0.0008;THETA=0.0003;AC=627;AN=2184 GT:DS:GL:BD 0.28708792 0
1 234266351 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.930;LDAF=0.2100;AVGPOST=0.9690;RSQ=0.9442;ERATE=0.0008;THETA=0.0004;AC=465;AN=2184 GT:DS:GL:BD 0.21291208 0
1 234266361 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.953;BRSQ=0.905;LDAF=0.2663;AVGPOST=0.9576;RSQ=0.9343;ERATE=0.0004;THETA=0.0004;AC=593;AN=2184 GT:DS:GL:BD 0.27152014 0
1 234266362 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.952;BRSQ=0.903;LDAF=0.2660;AVGPOST=0.9593;RSQ=0.9367;ERATE=0.0008;THETA=0.0014;AC=593;AN=2184 GT:DS:GL:BD 0.27152014 0
1 234266365 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.841;LDAF=0.0479;AVGPOST=0.9883;RSQ=0.9096;ERATE=0.0006;THETA=0.0021;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 234266368 . C CAG 592 PASS INDEL;BAVGPOST=0.998;BRSQ=0.929;LDAF=0.0173;AVGPOST=0.9941;RSQ=0.8735;ERATE=0.0006;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 234266401 . AG A 15188 PASS INDEL;BAVGPOST=0.982;BRSQ=0.970;LDAF=0.3243;AVGPOST=0.9833;RSQ=0.9761;ERATE=0.0016;THETA=0.0025;AC=700;AN=2184 GT:DS:GL:BD 0.32051283 0
1 234266483 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.980;LDAF=0.0420;AVGPOST=0.9988;RSQ=0.9865;ERATE=0.0004;THETA=0.0006;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 234266626 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0459;AVGPOST=0.9987;RSQ=0.9888;ERATE=0.0004;THETA=0.0006;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 234266644 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5615;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234266656 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.2691;AVGPOST=0.9963;RSQ=0.9942;ERATE=0.0003;THETA=0.0005;AC=585;AN=2184 GT:DS:GL:BD 0.26785713 0
1 234266662 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.2689;AVGPOST=0.9962;RSQ=0.9941;ERATE=0.0003;THETA=0.0006;AC=585;AN=2184 GT:DS:GL:BD 0.26785713 0
1 234266673 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.2683;AVGPOST=0.9955;RSQ=0.9926;ERATE=0.0004;THETA=0.0004;AC=583;AN=2184 GT:DS:GL:BD 0.26694140 0
1 234266674 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9411;ERATE=0.0003;THETA=0.0028;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234266682 . T TA 8256 PASS INDEL;BAVGPOST=0.983;BRSQ=0.969;LDAF=0.2640;AVGPOST=0.9852;RSQ=0.9759;ERATE=0.0005;THETA=0.0037;AC=575;AN=2184 GT:DS:GL:BD 0.26327839 0
1 234266690 rs35694091 A AG 5893 PASS INDEL;BAVGPOST=0.983;BRSQ=0.969;LDAF=0.2677;AVGPOST=0.9881;RSQ=0.9807;ERATE=0.0006;THETA=0.0004;AC=587;AN=2184 GT:DS:GL:BD 0.26877290 0
1 234266737 rs35411230 C CT 38310 PASS INDEL;BAVGPOST=0.994;BRSQ=0.987;LDAF=0.2728;AVGPOST=0.9947;RSQ=0.9912;ERATE=0.0008;THETA=0.0016;AC=594;AN=2184 GT:DS:GL:BD 0.27197802 0
1 234266784 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.987;LDAF=0.2729;AVGPOST=0.9977;RSQ=0.9961;ERATE=0.0003;THETA=0.0002;AC=593;AN=2184 GT:DS:GL:BD 0.27152014 0
1 234266786 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.987;LDAF=0.2730;AVGPOST=0.9977;RSQ=0.9961;ERATE=0.0003;THETA=0.0043;AC=593;AN=2184 GT:DS:GL:BD 0.27152014 0
1 234266875 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234266915 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2737;AVGPOST=0.9968;RSQ=0.9945;ERATE=0.0007;THETA=0.0009;AC=595;AN=2184 GT:DS:GL:BD 0.27243590 0
1 234266928 . A AT 9109 PASS INDEL;BAVGPOST=0.990;BRSQ=0.981;LDAF=0.2733;AVGPOST=0.9951;RSQ=0.9918;ERATE=0.0005;THETA=0.0002;AC=596;AN=2184 GT:DS:GL:BD 0.27289379 0
1 234266931 rs35930192 T TC 40959 PASS INDEL;BAVGPOST=0.991;BRSQ=0.982;LDAF=0.2728;AVGPOST=0.9971;RSQ=0.9950;ERATE=0.0006;THETA=0.0006;AC=595;AN=2184 GT:DS:GL:BD 0.27243590 0
1 234266936 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0032;AVGPOST=0.9988;RSQ=0.8519;ERATE=0.0004;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234267131 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2783;AVGPOST=0.9941;RSQ=0.9926;ERATE=0.0005;THETA=0.0011;AC=609;AN=2184 GT:DS:GL:BD 0.27884614 0
1 234267263 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0023;AVGPOST=0.9986;RSQ=0.7358;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234267264 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0448;AVGPOST=0.9993;RSQ=0.9939;ERATE=0.0003;THETA=0.0006;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 234267329 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0547;AVGPOST=0.9990;RSQ=0.9941;ERATE=0.0003;THETA=0.0007;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 234267407 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0226;AVGPOST=0.9996;RSQ=0.9929;ERATE=0.0003;THETA=0.0007;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 234267536 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2736;AVGPOST=0.9981;RSQ=0.9968;ERATE=0.0006;THETA=0.0004;AC=596;AN=2184 GT:DS:GL:BD 0.27289379 0
1 234267593 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234267604 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2732;AVGPOST=0.9988;RSQ=0.9978;ERATE=0.0003;THETA=0.0001;AC=595;AN=2184 GT:DS:GL:BD 0.27243590 0
1 234267647 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8653;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234267657 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2729;AVGPOST=0.9986;RSQ=0.9978;ERATE=0.0003;THETA=0.0026;AC=594;AN=2184 GT:DS:GL:BD 0.27197802 0
1 234267696 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0393;AVGPOST=0.9993;RSQ=0.9933;ERATE=0.0003;THETA=0.0023;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 234267766 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6520;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234267810 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2729;AVGPOST=0.9977;RSQ=0.9969;ERATE=0.0004;THETA=0.0007;AC=598;AN=2184 GT:DS:GL:BD 0.27380952 0
1 234267824 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2740;AVGPOST=0.9991;RSQ=0.9983;ERATE=0.0003;THETA=0.0003;AC=597;AN=2184 GT:DS:GL:BD 0.27335164 0
1 234267832 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2736;AVGPOST=0.9984;RSQ=0.9977;ERATE=0.0003;THETA=0.0006;AC=597;AN=2184 GT:DS:GL:BD 0.27335164 0
1 234267894 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234267903 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2740;AVGPOST=0.9990;RSQ=0.9982;ERATE=0.0003;THETA=0.0020;AC=597;AN=2184 GT:DS:GL:BD 0.27335164 0
1 234268080 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0559;AVGPOST=0.9988;RSQ=0.9916;ERATE=0.0003;THETA=0.0002;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 234268087 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0017;AVGPOST=0.9977;RSQ=0.5715;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234268102 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234268106 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6552;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234268189 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0065;AVGPOST=0.9985;RSQ=0.9112;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234268242 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0101;AVGPOST=0.9999;RSQ=0.9956;ERATE=0.0003;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234268420 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2745;AVGPOST=0.9982;RSQ=0.9965;ERATE=0.0006;THETA=0.0006;AC=597;AN=2184 GT:DS:GL:BD 0.27335164 0
1 234268432 . AG A 471 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0057;AVGPOST=0.9996;RSQ=0.9665;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234268437 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2766;AVGPOST=0.9972;RSQ=0.9947;ERATE=0.0007;THETA=0.0003;AC=602;AN=2184 GT:DS:GL:BD 0.27564102 0
1 234268453 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.850;LDAF=0.0028;AVGPOST=0.9981;RSQ=0.7351;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234268556 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2744;AVGPOST=0.9987;RSQ=0.9975;ERATE=0.0004;THETA=0.0005;AC=597;AN=2184 GT:DS:GL:BD 0.27335164 0
1 234268590 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5518;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234268610 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.753;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7772;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234268655 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234268670 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7408;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234268739 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234268839 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0546;AVGPOST=0.9984;RSQ=0.9890;ERATE=0.0003;THETA=0.0007;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 234268889 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0029;AVGPOST=0.9998;RSQ=0.9618;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234268994 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2745;AVGPOST=0.9988;RSQ=0.9977;ERATE=0.0006;THETA=0.0004;AC=597;AN=2184 GT:DS:GL:BD 0.27335164 0
1 234269035 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0226;AVGPOST=0.9995;RSQ=0.9912;ERATE=0.0003;THETA=0.0004;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 234269075 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0559;AVGPOST=0.9988;RSQ=0.9931;ERATE=0.0003;THETA=0.0006;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 234269155 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0085;AVGPOST=0.9989;RSQ=0.9530;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 234269169 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2744;AVGPOST=0.9993;RSQ=0.9986;ERATE=0.0005;THETA=0.0004;AC=597;AN=2184 GT:DS:GL:BD 0.27335164 0
1 234269170 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0454;AVGPOST=0.9995;RSQ=0.9954;ERATE=0.0003;THETA=0.0004;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 234269226 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0036;AVGPOST=0.9989;RSQ=0.8714;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234269243 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0026;AVGPOST=0.9977;RSQ=0.6402;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234269305 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2492;AVGPOST=0.9995;RSQ=0.9990;ERATE=0.0003;THETA=0.0011;AC=542;AN=2184 GT:DS:GL:BD 0.24816850 0
1 234269425 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0454;AVGPOST=0.9996;RSQ=0.9964;ERATE=0.0003;THETA=0.0003;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 234269476 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234269529 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0107;AVGPOST=0.9989;RSQ=0.9652;ERATE=0.0003;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234269541 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234269652 . CAG C 866 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0057;AVGPOST=0.9996;RSQ=0.9669;ERATE=0.0003;THETA=0.0034;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234269792 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3214;AVGPOST=0.9972;RSQ=0.9955;ERATE=0.0009;THETA=0.0004;AC=700;AN=2184 GT:DS:GL:BD 0.32051283 0
1 234269836 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5184;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234269912 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0034;AVGPOST=0.9991;RSQ=0.8837;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234269913 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9052;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234269957 . C CT 101 PASS INDEL;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0031;AVGPOST=0.9979;RSQ=0.7306;ERATE=0.0004;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234269958 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3301;AVGPOST=0.9987;RSQ=0.9977;ERATE=0.0006;THETA=0.0003;AC=719;AN=2184 GT:DS:GL:BD 0.32921246 0
1 234270030 . GTAAT G 1812 PASS INDEL;BAVGPOST=0.998;BRSQ=0.967;LDAF=0.0270;AVGPOST=0.9929;RSQ=0.8992;ERATE=0.0008;THETA=0.0006;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 234270076 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.452;LDAF=0.0067;AVGPOST=0.9910;RSQ=0.4308;ERATE=0.0011;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234270121 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.2530;AVGPOST=0.9803;RSQ=0.9667;ERATE=0.0023;THETA=0.0003;AC=542;AN=2184 GT:DS:GL:BD 0.24816850 0
1 234270333 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0042;AVGPOST=0.9982;RSQ=0.8332;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234270353 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2496;AVGPOST=0.9988;RSQ=0.9976;ERATE=0.0004;THETA=0.0004;AC=543;AN=2184 GT:DS:GL:BD 0.24862637 0
1 234270417 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2725;AVGPOST=0.9984;RSQ=0.9975;ERATE=0.0005;THETA=0.0007;AC=596;AN=2184 GT:DS:GL:BD 0.27289379 0
1 234270438 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3329;AVGPOST=0.9985;RSQ=0.9980;ERATE=0.0004;THETA=0.0003;AC=728;AN=2184 GT:DS:GL:BD 0.33333334 0
1 234270483 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.636;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6490;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234270529 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.848;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9265;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234270624 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.3258;AVGPOST=0.9909;RSQ=0.9879;ERATE=0.0004;THETA=0.0003;AC=717;AN=2184 GT:DS:GL:BD 0.32829669 0
1 234270625 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.8995;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234270629 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.742;LDAF=0.0107;AVGPOST=0.9924;RSQ=0.7111;ERATE=0.0011;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 234270762 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2723;AVGPOST=0.9994;RSQ=0.9990;ERATE=0.0003;THETA=0.0005;AC=596;AN=2184 GT:DS:GL:BD 0.27289379 0
1 234270917 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3331;AVGPOST=0.9989;RSQ=0.9986;ERATE=0.0003;THETA=0.0014;AC=728;AN=2184 GT:DS:GL:BD 0.33333334 0
1 234270980 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2752;AVGPOST=0.9998;RSQ=0.9996;ERATE=0.0003;THETA=0.0045;AC=602;AN=2184 GT:DS:GL:BD 0.27564102 0
1 234271018 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8057;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234271116 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6373;ERATE=0.0003;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234271193 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9333;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234271214 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234271217 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234271347 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3639;AVGPOST=0.9986;RSQ=0.9981;ERATE=0.0003;THETA=0.0008;AC=796;AN=2184 GT:DS:GL:BD 0.36446887 0
1 234271350 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7330;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234271417 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3637;AVGPOST=0.9984;RSQ=0.9977;ERATE=0.0004;THETA=0.0008;AC=796;AN=2184 GT:DS:GL:BD 0.36446887 0
1 234271484 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3617;AVGPOST=0.9987;RSQ=0.9981;ERATE=0.0004;THETA=0.0021;AC=791;AN=2184 GT:DS:GL:BD 0.36217949 0
1 234271615 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5775;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234271675 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234271687 . C CTT 1538 PASS INDEL;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0096;AVGPOST=0.9972;RSQ=0.8994;ERATE=0.0004;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 234271726 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0061;AVGPOST=0.9996;RSQ=0.9721;ERATE=0.0003;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234271797 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9889;ERATE=0.0003;THETA=0.0017;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234271833 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0332;AVGPOST=0.9995;RSQ=0.9927;ERATE=0.0003;THETA=0.0074;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 234271861 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7170;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234271868 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2488;AVGPOST=0.9966;RSQ=0.9943;ERATE=0.0004;THETA=0.0048;AC=541;AN=2184 GT:DS:GL:BD 0.24771062 0
1 234271910 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.711;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5706;ERATE=0.0003;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234271939 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.984;LDAF=0.6540;AVGPOST=0.9882;RSQ=0.9809;ERATE=0.0011;THETA=0.0006;AC=1430;AN=2184 GT:DS:GL:BD 0.65476191 1
1 234272006 rs71854591 G GTCTTTCTTTCTCT 81153 PASS INDEL;BAVGPOST=0.963;BRSQ=0.935;LDAF=0.3111;AVGPOST=0.9764;RSQ=0.9666;ERATE=0.0008;THETA=0.0005;AC=689;AN=2184 GT:DS:GL:BD 0.31547618 0
1 234272050 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.974;LDAF=0.3214;AVGPOST=0.9835;RSQ=0.9784;ERATE=0.0025;THETA=0.0012;AC=712;AN=2184 GT:DS:GL:BD 0.32600734 0
1 234272052 . TTC T 69 PASS INDEL;BAVGPOST=0.995;BRSQ=0.891;LDAF=0.0204;AVGPOST=0.9945;RSQ=0.9116;ERATE=0.0003;THETA=0.0040;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 234272056 rs113192387 CTCTT C 4936 PASS INDEL;BAVGPOST=0.998;BRSQ=0.972;LDAF=0.0251;AVGPOST=0.9966;RSQ=0.9605;ERATE=0.0005;THETA=0.0006;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 234272097 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0448;AVGPOST=0.9994;RSQ=0.9943;ERATE=0.0004;THETA=0.0018;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 234272120 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0056;AVGPOST=0.9995;RSQ=0.9618;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234272438 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234272480 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0003;AVGPOST=0.9995;RSQ=0.2830;ERATE=0.0003;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 234272687 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9999;RSQ=0.9881;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234272690 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7873;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234272787 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0055;AVGPOST=0.9999;RSQ=0.9921;ERATE=0.0003;THETA=0.0050;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234272887 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4449;AVGPOST=0.9975;RSQ=0.9968;ERATE=0.0004;THETA=0.0004;AC=974;AN=2184 GT:DS:GL:BD 0.44597068 0
1 234273182 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234273318 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2719;AVGPOST=0.9984;RSQ=0.9978;ERATE=0.0005;THETA=0.0003;AC=592;AN=2184 GT:DS:GL:BD 0.27106228 0
1 234273399 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6583;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234273400 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0054;AVGPOST=0.9995;RSQ=0.9671;ERATE=0.0003;THETA=0.0053;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234273484 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4443;AVGPOST=0.9993;RSQ=0.9991;ERATE=0.0003;THETA=0.0004;AC=972;AN=2184 GT:DS:GL:BD 0.44505495 0
1 234273509 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0037;AVGPOST=0.9993;RSQ=0.9104;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234273515 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.633;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6257;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234273516 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.7497;AVGPOST=0.9972;RSQ=0.9945;ERATE=0.0006;THETA=0.0006;AC=1638;AN=2184 GT:DS:GL:BD 0.75000000 1
1 234273572 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.958;LDAF=0.0219;AVGPOST=0.9994;RSQ=0.9859;ERATE=0.0003;THETA=0.0003;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 234273602 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8410;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234273669 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.759;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8673;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234273736 . GA G 4703 PASS INDEL;BAVGPOST=0.993;BRSQ=0.898;LDAF=0.0303;AVGPOST=0.9936;RSQ=0.9150;ERATE=0.0005;THETA=0.0005;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 234273793 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9420;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234273867 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.6067;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234273919 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0230;AVGPOST=0.9997;RSQ=0.9940;ERATE=0.0003;THETA=0.0004;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 234273943 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.651;LDAF=0.0019;AVGPOST=0.9986;RSQ=0.7327;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234274274 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.4498;AVGPOST=0.9996;RSQ=0.9994;ERATE=0.0003;THETA=0.0002;AC=984;AN=2184 GT:DS:GL:BD 0.45054945 0
1 234274290 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0061;AVGPOST=0.9991;RSQ=0.9396;ERATE=0.0005;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234274300 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9555;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234274353 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.8785;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234274378 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7615;AVGPOST=0.9989;RSQ=0.9974;ERATE=0.0004;THETA=0.0003;AC=1664;AN=2184 GT:DS:GL:BD 0.76190478 1
1 234274421 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8442;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234274476 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9999;RSQ=0.9881;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234274526 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8703;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234274554 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0312;AVGPOST=0.9998;RSQ=0.9972;ERATE=0.0003;THETA=0.0004;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 234274566 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.9145;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234274592 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4134;AVGPOST=0.9985;RSQ=0.9978;ERATE=0.0005;THETA=0.0009;AC=904;AN=2184 GT:DS:GL:BD 0.41391942 0
1 234274658 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7527;AVGPOST=0.9994;RSQ=0.9985;ERATE=0.0003;THETA=0.0003;AC=1644;AN=2184 GT:DS:GL:BD 0.75274724 1
1 234274725 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7109;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234274988 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1360;AVGPOST=0.9977;RSQ=0.9931;ERATE=0.0004;THETA=0.0016;AC=297;AN=2184 GT:DS:GL:BD 0.13598901 0
1 234275021 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0036;AVGPOST=0.9988;RSQ=0.8821;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234275117 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0444;AVGPOST=0.9989;RSQ=0.9919;ERATE=0.0003;THETA=0.0006;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 234275194 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5966;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234275214 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0052;AVGPOST=0.9996;RSQ=0.9627;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234275222 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.3005;AVGPOST=0.9981;RSQ=0.9967;ERATE=0.0004;THETA=0.0005;AC=654;AN=2184 GT:DS:GL:BD 0.29945055 0
1 234275248 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7452;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234275304 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9734;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234275307 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0153;AVGPOST=0.9985;RSQ=0.9675;ERATE=0.0003;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 234275355 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4930;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234275384 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.934;LDAF=0.0206;AVGPOST=0.9970;RSQ=0.9509;ERATE=0.0003;THETA=0.0001;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 234275459 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4728;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234275511 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0263;AVGPOST=0.9932;RSQ=0.9094;ERATE=0.0005;THETA=0.0007;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 234275609 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.869;LDAF=0.0489;AVGPOST=0.9888;RSQ=0.9209;ERATE=0.0008;THETA=0.0003;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 234275619 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.958;LDAF=0.0451;AVGPOST=0.9976;RSQ=0.9786;ERATE=0.0007;THETA=0.0005;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 234275739 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.805;LDAF=0.0066;AVGPOST=0.9972;RSQ=0.8201;ERATE=0.0004;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234275810 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.822;LDAF=0.0089;AVGPOST=0.9975;RSQ=0.8783;ERATE=0.0004;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 234275855 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0021;AVGPOST=0.9975;RSQ=0.6378;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234275906 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4195;AVGPOST=0.9980;RSQ=0.9972;ERATE=0.0005;THETA=0.0024;AC=918;AN=2184 GT:DS:GL:BD 0.42032966 0
1 234276013 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.814;LDAF=0.0064;AVGPOST=0.9963;RSQ=0.7706;ERATE=0.0006;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234276014 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3016;AVGPOST=0.9968;RSQ=0.9948;ERATE=0.0007;THETA=0.0002;AC=657;AN=2184 GT:DS:GL:BD 0.30082417 0
1 234276109 . TTA T 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0015;AVGPOST=0.9985;RSQ=0.5756;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234276217 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7563;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234276241 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.667;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5408;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234276242 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0046;AVGPOST=0.9984;RSQ=0.8680;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234276279 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7596;ERATE=0.0003;THETA=0.0023;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234276285 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9639;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234276350 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.943;LDAF=0.7229;AVGPOST=0.9709;RSQ=0.9524;ERATE=0.0008;THETA=0.0004;AC=1582;AN=2184 GT:DS:GL:BD 0.72435898 1
1 234276351 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.943;LDAF=0.7190;AVGPOST=0.9633;RSQ=0.9405;ERATE=0.0030;THETA=0.0004;AC=1581;AN=2184 GT:DS:GL:BD 0.72390109 1
1 234276395 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0852;AVGPOST=0.9996;RSQ=0.9980;ERATE=0.0003;THETA=0.0004;AC=186;AN=2184 GT:DS:GL:BD 0.08516484 0
1 234276403 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0054;AVGPOST=0.9992;RSQ=0.9405;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234276483 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8316;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234276513 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.667;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6228;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234276571 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4280;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234276606 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0251;AVGPOST=0.9998;RSQ=0.9961;ERATE=0.0003;THETA=0.0004;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 234276633 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.878;LDAF=0.0125;AVGPOST=0.9964;RSQ=0.8808;ERATE=0.0004;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234276639 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3507;AVGPOST=0.9973;RSQ=0.9958;ERATE=0.0006;THETA=0.0004;AC=764;AN=2184 GT:DS:GL:BD 0.34981686 0
1 234276888 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0061;AVGPOST=0.9988;RSQ=0.9220;ERATE=0.0004;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234276914 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7557;ERATE=0.0008;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234277250 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0069;AVGPOST=0.9989;RSQ=0.9335;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234277251 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.4776;AVGPOST=0.9993;RSQ=0.9990;ERATE=0.0003;THETA=0.0005;AC=1045;AN=2184 GT:DS:GL:BD 0.47847986 0
1 234277275 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9607;ERATE=0.0003;THETA=0.0023;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234277334 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7418;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234277413 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8424;ERATE=0.0007;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234277445 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4778;AVGPOST=0.9989;RSQ=0.9985;ERATE=0.0003;THETA=0.0005;AC=1045;AN=2184 GT:DS:GL:BD 0.47847986 0
1 234277494 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0176;AVGPOST=0.9989;RSQ=0.9741;ERATE=0.0003;THETA=0.0013;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 234277576 rs56271368 CTT C 7424 PASS INDEL;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0439;AVGPOST=0.9999;RSQ=0.9986;ERATE=0.0003;THETA=0.0004;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 234277579 . TTG T 1410 PASS INDEL;BAVGPOST=0.996;BRSQ=0.954;LDAF=0.0484;AVGPOST=0.9897;RSQ=0.9121;ERATE=0.0010;THETA=0.0004;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 234277600 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6523;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234277711 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7545;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234277736 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6180;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234277739 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.9094;ERATE=0.0003;THETA=0.0021;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234277833 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234277867 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0618;AVGPOST=0.9994;RSQ=0.9961;ERATE=0.0003;THETA=0.0010;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 234277904 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4829;AVGPOST=0.9989;RSQ=0.9986;ERATE=0.0003;THETA=0.0004;AC=1057;AN=2184 GT:DS:GL:BD 0.48397437 0
1 234278047 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234278139 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0051;AVGPOST=0.9990;RSQ=0.9294;ERATE=0.0003;THETA=0.0033;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234278195 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.676;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4582;ERATE=0.0003;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234278204 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0036;AVGPOST=0.9982;RSQ=0.7992;ERATE=0.0005;THETA=0.0001;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234278206 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0044;AVGPOST=0.9984;RSQ=0.8524;ERATE=0.0011;THETA=0.0024;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234278243 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.725;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234278270 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0050;AVGPOST=0.9998;RSQ=0.9838;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234278292 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234278325 rs113326939 CA C 4215 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0262;AVGPOST=0.9990;RSQ=0.9845;ERATE=0.0004;THETA=0.0005;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 234278432 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2895;AVGPOST=0.9987;RSQ=0.9982;ERATE=0.0004;THETA=0.0008;AC=633;AN=2184 GT:DS:GL:BD 0.28983516 0
1 234278463 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0070;AVGPOST=0.9981;RSQ=0.8821;ERATE=0.0004;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234278524 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0055;AVGPOST=0.9998;RSQ=0.9841;ERATE=0.0003;THETA=0.0009;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234278561 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0032;AVGPOST=0.9987;RSQ=0.8259;ERATE=0.0005;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234278564 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0039;AVGPOST=0.9996;RSQ=0.9496;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234278587 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6616;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234278774 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5400;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234278917 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0024;AVGPOST=0.9985;RSQ=0.7535;ERATE=0.0003;THETA=0.0033;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234279035 . T TTTTC 14676 PASS INDEL;BAVGPOST=0.870;BRSQ=0.750;LDAF=0.3934;AVGPOST=0.8503;RSQ=0.7547;ERATE=0.0235;THETA=0.0004;AC=845;AN=2184 GT:DS:GL:BD 0.38690478 0
1 234279037 . T TTC 12443 PASS INDEL;BAVGPOST=0.883;BRSQ=0.769;LDAF=0.3815;AVGPOST=0.8578;RSQ=0.7705;ERATE=0.0193;THETA=0.0005;AC=826;AN=2184 GT:DS:GL:BD 0.37820512 0
1 234279039 . T TTTTC 1964 PASS INDEL;BAVGPOST=0.923;BRSQ=0.598;LDAF=0.1007;AVGPOST=0.9419;RSQ=0.7724;ERATE=0.0007;THETA=0.0007;AC=189;AN=2184 GT:DS:GL:BD 0.08653846 0
1 234279042 . T TC 33 PASS INDEL;BAVGPOST=0.985;BRSQ=0.410;LDAF=0.0280;AVGPOST=0.9679;RSQ=0.5707;ERATE=0.0005;THETA=0.0004;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 234279064 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0188;AVGPOST=0.9998;RSQ=0.9952;ERATE=0.0003;THETA=0.0005;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 234279110 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.712;LDAF=0.0039;AVGPOST=0.9976;RSQ=0.7793;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234279120 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0463;AVGPOST=0.9993;RSQ=0.9934;ERATE=0.0004;THETA=0.0005;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 234279308 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0310;AVGPOST=0.9981;RSQ=0.9740;ERATE=0.0004;THETA=0.0003;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 234279373 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3354;AVGPOST=0.9976;RSQ=0.9969;ERATE=0.0004;THETA=0.0004;AC=734;AN=2184 GT:DS:GL:BD 0.33608058 0
1 234279453 . TG T 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5932;ERATE=0.0003;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234279491 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0495;AVGPOST=0.9980;RSQ=0.9854;ERATE=0.0003;THETA=0.0004;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 234279534 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0188;AVGPOST=0.9998;RSQ=0.9940;ERATE=0.0003;THETA=0.0006;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 234279556 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8526;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234279644 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1350;AVGPOST=0.9982;RSQ=0.9942;ERATE=0.0004;THETA=0.0005;AC=295;AN=2184 GT:DS:GL:BD 0.13507326 0
1 234279650 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.0052;AVGPOST=0.9984;RSQ=0.9005;ERATE=0.0003;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234279755 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0499;AVGPOST=0.9996;RSQ=0.9962;ERATE=0.0003;THETA=0.0005;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 234279838 rs58265953 G GA 59625 PASS INDEL;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.3379;AVGPOST=0.9968;RSQ=0.9956;ERATE=0.0005;THETA=0.0002;AC=741;AN=2184 GT:DS:GL:BD 0.33928570 0
1 234279839 . A AG 17349 PASS INDEL;BAVGPOST=0.993;BRSQ=0.989;LDAF=0.3345;AVGPOST=0.9915;RSQ=0.9881;ERATE=0.0007;THETA=0.0004;AC=736;AN=2184 GT:DS:GL:BD 0.33699635 0
1 234280043 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234280135 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0499;AVGPOST=0.9998;RSQ=0.9979;ERATE=0.0003;THETA=0.0005;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 234280185 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0408;AVGPOST=0.9997;RSQ=0.9969;ERATE=0.0003;THETA=0.0008;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 234280208 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0038;AVGPOST=0.9998;RSQ=0.9710;ERATE=0.0010;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234280288 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234280339 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.882;LDAF=0.9779;AVGPOST=0.9971;RSQ=0.9460;ERATE=0.0004;THETA=0.0003;AC=2137;AN=2184 GT:DS:GL:BD 0.97847986 1
1 234280353 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234280404 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0498;AVGPOST=0.9999;RSQ=0.9992;ERATE=0.0003;THETA=0.0004;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 234280536 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0499;AVGPOST=0.9998;RSQ=0.9986;ERATE=0.0003;THETA=0.0005;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 234280547 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2871;AVGPOST=0.9989;RSQ=0.9984;ERATE=0.0003;THETA=0.0003;AC=628;AN=2184 GT:DS:GL:BD 0.28754580 0
1 234280572 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0500;AVGPOST=0.9997;RSQ=0.9972;ERATE=0.0003;THETA=0.0004;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 234280630 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0456;AVGPOST=0.9981;RSQ=0.9818;ERATE=0.0003;THETA=0.0007;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 234280681 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.0872;AVGPOST=0.9994;RSQ=0.9972;ERATE=0.0003;THETA=0.0005;AC=191;AN=2184 GT:DS:GL:BD 0.08745421 0
1 234280821 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.733;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5240;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234280822 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.965;LDAF=0.0147;AVGPOST=0.9975;RSQ=0.9361;ERATE=0.0004;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 234280906 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0503;AVGPOST=0.9989;RSQ=0.9909;ERATE=0.0004;THETA=0.0003;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 234280927 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0508;AVGPOST=0.9990;RSQ=0.9914;ERATE=0.0003;THETA=0.0004;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 234280991 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.944;LDAF=0.0144;AVGPOST=0.9989;RSQ=0.9661;ERATE=0.0004;THETA=0.0002;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 234281220 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0230;AVGPOST=0.9992;RSQ=0.9852;ERATE=0.0003;THETA=0.0005;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 234281230 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0511;AVGPOST=0.9974;RSQ=0.9838;ERATE=0.0003;THETA=0.0004;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 234281319 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7425;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234281343 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.569;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8305;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234281361 rs112085526 CT C 156 PASS INDEL;BAVGPOST=0.997;BRSQ=0.539;LDAF=0.0025;AVGPOST=0.9974;RSQ=0.5911;ERATE=0.0006;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234281396 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234281500 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.3403;AVGPOST=0.9978;RSQ=0.9970;ERATE=0.0004;THETA=0.0004;AC=745;AN=2184 GT:DS:GL:BD 0.34111720 0
1 234281501 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0498;AVGPOST=0.9996;RSQ=0.9963;ERATE=0.0003;THETA=0.0005;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 234281591 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6947;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234281592 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0874;AVGPOST=0.9997;RSQ=0.9987;ERATE=0.0003;THETA=0.0004;AC=191;AN=2184 GT:DS:GL:BD 0.08745421 0
1 234281636 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9460;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234281688 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5392;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234281712 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0190;AVGPOST=0.9994;RSQ=0.9847;ERATE=0.0003;THETA=0.0003;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 234281715 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4851;AVGPOST=0.9984;RSQ=0.9980;ERATE=0.0003;THETA=0.0003;AC=1061;AN=2184 GT:DS:GL:BD 0.48580587 0
1 234281799 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0499;AVGPOST=0.9998;RSQ=0.9979;ERATE=0.0003;THETA=0.0005;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 234281866 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0409;AVGPOST=0.9996;RSQ=0.9954;ERATE=0.0003;THETA=0.0006;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0