1092
10000
1 24719031 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24719041 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0004;AVGPOST=0.9997;RSQ=0.7060;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24719167 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0340;AVGPOST=0.9996;RSQ=0.9957;ERATE=0.0003;THETA=0.0005;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 24719244 . T TG 109 PASS INDEL;BAVGPOST=0.998;BRSQ=0.803;LDAF=0.0039;AVGPOST=0.9963;RSQ=0.6308;ERATE=0.0008;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24719250 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.923;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24719580 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6846;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24719598 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0151;AVGPOST=1.0000;RSQ=0.9986;ERATE=0.0003;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 24719661 . C CTG 253 PASS INDEL;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7121;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24719691 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2496;AVGPOST=0.9983;RSQ=0.9965;ERATE=0.0004;THETA=0.0006;AC=544;AN=2184 GT:DS:GL:BD 0.24908425 0
1 24719779 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.9016;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24719798 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.930;LDAF=0.0106;AVGPOST=0.9985;RSQ=0.9496;ERATE=0.0004;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 24719867 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5550;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24720003 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.7453;AVGPOST=0.9982;RSQ=0.9957;ERATE=0.0004;THETA=0.0006;AC=1629;AN=2184 GT:DS:GL:BD 0.74587911 1
1 24720053 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0079;AVGPOST=0.9988;RSQ=0.9395;ERATE=0.0004;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 24720055 . GA G 1150 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0078;AVGPOST=0.9991;RSQ=0.9546;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 24720229 . G GA 1135 PASS INDEL;BAVGPOST=0.997;BRSQ=0.932;LDAF=0.0187;AVGPOST=0.9950;RSQ=0.8949;ERATE=0.0010;THETA=0.0002;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 24720257 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24720331 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5664;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24720346 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4560;AVGPOST=0.9991;RSQ=0.9987;ERATE=0.0003;THETA=0.0005;AC=996;AN=2184 GT:DS:GL:BD 0.45604396 0
1 24720406 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0022;AVGPOST=0.9971;RSQ=0.5258;ERATE=0.0006;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24720408 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.708;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7129;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24720414 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7091;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24720415 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0093;AVGPOST=0.9998;RSQ=0.9894;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 24720491 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7440;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24720578 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7443;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24720582 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0199;AVGPOST=0.9984;RSQ=0.9743;ERATE=0.0003;THETA=0.0004;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 24720585 . G GA 14 PASS INDEL;BAVGPOST=0.999;BRSQ=0.626;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.5566;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24720613 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0083;AVGPOST=0.9970;RSQ=0.8665;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 24720715 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24720865 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.0034;AVGPOST=0.9991;RSQ=0.8906;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24721040 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.887;LDAF=0.0515;AVGPOST=0.9916;RSQ=0.9349;ERATE=0.0004;THETA=0.0002;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 24721153 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24721186 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6229;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24721296 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.915;LDAF=0.0173;AVGPOST=0.9973;RSQ=0.9334;ERATE=0.0004;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 24721359 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0129;AVGPOST=0.9959;RSQ=0.8778;ERATE=0.0010;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 24721581 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.682;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6818;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24721770 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0191;AVGPOST=0.9994;RSQ=0.9860;ERATE=0.0004;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 24721916 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.914;LDAF=0.0605;AVGPOST=0.9868;RSQ=0.9121;ERATE=0.0016;THETA=0.0003;AC=123;AN=2184 GT:DS:GL:BD 0.05631868 0
1 24721945 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.957;BRSQ=0.914;LDAF=0.3846;AVGPOST=0.9782;RSQ=0.9628;ERATE=0.0019;THETA=0.0004;AC=841;AN=2184 GT:DS:GL:BD 0.38507327 0
1 24721979 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.365;LDAF=0.0131;AVGPOST=0.9807;RSQ=0.4192;ERATE=0.0022;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 24722068 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.699;LDAF=0.0208;AVGPOST=0.9955;RSQ=0.9171;ERATE=0.0007;THETA=0.0003;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 24722077 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0108;AVGPOST=0.9981;RSQ=0.9219;ERATE=0.0006;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 24722169 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.688;LDAF=0.0022;AVGPOST=0.9974;RSQ=0.5062;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24722398 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.974;LDAF=0.3899;AVGPOST=0.9910;RSQ=0.9847;ERATE=0.0010;THETA=0.0003;AC=853;AN=2184 GT:DS:GL:BD 0.39056778 0
1 24722451 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.743;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.6390;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24722703 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0086;AVGPOST=0.9993;RSQ=0.9620;ERATE=0.0005;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 24722781 . CT C 553 PASS INDEL;BAVGPOST=0.993;BRSQ=0.770;LDAF=0.0176;AVGPOST=0.9968;RSQ=0.9371;ERATE=0.0004;THETA=0.0006;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 24722956 . T TG 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8681;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24722968 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0345;AVGPOST=0.9986;RSQ=0.9861;ERATE=0.0003;THETA=0.0002;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 24722995 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0183;AVGPOST=1.0000;RSQ=0.9989;ERATE=0.0003;THETA=0.0003;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 24722997 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0194;AVGPOST=0.9983;RSQ=0.9713;ERATE=0.0004;THETA=0.0003;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 24723045 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8174;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24723113 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0046;AVGPOST=0.9988;RSQ=0.9008;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 24723118 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0022;AVGPOST=0.9982;RSQ=0.6485;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24723209 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0159;AVGPOST=0.9995;RSQ=0.9879;ERATE=0.0003;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 24723307 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0559;AVGPOST=0.9997;RSQ=0.9978;ERATE=0.0003;THETA=0.0004;AC=122;AN=2184 GT:DS:GL:BD 0.05586081 0
1 24723567 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0037;AVGPOST=0.9981;RSQ=0.8178;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24723605 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.8975;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24723696 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0087;AVGPOST=0.9998;RSQ=0.9875;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 24723705 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3908;AVGPOST=0.9991;RSQ=0.9983;ERATE=0.0004;THETA=0.0003;AC=854;AN=2184 GT:DS:GL:BD 0.39102563 0
1 24723768 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.2508;AVGPOST=0.9989;RSQ=0.9975;ERATE=0.0004;THETA=0.0004;AC=547;AN=2184 GT:DS:GL:BD 0.25045788 0
1 24723783 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0029;AVGPOST=0.9979;RSQ=0.6987;ERATE=0.0007;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24723985 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.991;LDAF=0.7433;AVGPOST=0.9922;RSQ=0.9839;ERATE=0.0020;THETA=0.0002;AC=1627;AN=2184 GT:DS:GL:BD 0.74496335 1
1 24723986 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0092;AVGPOST=0.9984;RSQ=0.9443;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 24724068 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24724256 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.776;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.8841;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24724303 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4109;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24724491 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.709;LDAF=0.0010;AVGPOST=0.9987;RSQ=0.4578;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24724515 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7103;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24724518 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7765;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24724586 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.765;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6324;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24724838 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5613;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24725076 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.3428;AVGPOST=0.9943;RSQ=0.9902;ERATE=0.0006;THETA=0.0004;AC=747;AN=2184 GT:DS:GL:BD 0.34203297 0
1 24725352 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.753;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8084;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24725553 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.770;LDAF=0.0021;AVGPOST=0.9980;RSQ=0.6229;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24725730 . GAATA G 144 PASS INDEL;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7604;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24725872 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5892;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24725952 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9673;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24725980 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.5951;ERATE=0.0005;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24726089 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0191;AVGPOST=0.9992;RSQ=0.9824;ERATE=0.0003;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 24726108 . AT A 233 PASS INDEL;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0046;AVGPOST=0.9995;RSQ=0.9490;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 24726161 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0003;THETA=0.0063;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24726505 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24726694 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24726725 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7794;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24726770 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7280;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24726938 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0185;AVGPOST=0.9994;RSQ=0.9864;ERATE=0.0004;THETA=0.0004;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 24727076 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5363;ERATE=0.0007;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24727235 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2942;AVGPOST=0.9975;RSQ=0.9958;ERATE=0.0003;THETA=0.0003;AC=643;AN=2184 GT:DS:GL:BD 0.29441392 0
1 24727248 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7299;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24727469 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.641;LDAF=0.0048;AVGPOST=0.9950;RSQ=0.5930;ERATE=0.0025;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24727494 . T TA 5 PASS INDEL;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.8057;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24727598 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6637;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24727611 . C CT 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0022;AVGPOST=0.9967;RSQ=0.4373;ERATE=0.0010;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24727644 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24727678 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7113;AVGPOST=0.9990;RSQ=0.9984;ERATE=0.0006;THETA=0.0003;AC=1552;AN=2184 GT:DS:GL:BD 0.71062273 1
1 24727740 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24727807 . A AGT 104 PASS INDEL;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4576;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24727897 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0178;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0025;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 24728169 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9287;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 24728230 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6860;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24728358 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9063;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24728365 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.973;LDAF=0.1286;AVGPOST=0.9947;RSQ=0.9834;ERATE=0.0006;THETA=0.0004;AC=279;AN=2184 GT:DS:GL:BD 0.12774725 0
1 24728456 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.729;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.5443;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24728522 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.730;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24728667 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24728805 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.773;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24728839 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0004;THETA=0.0058;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24728867 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6299;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24728916 . ATCT A 25029 PASS INDEL;BAVGPOST=0.990;BRSQ=0.972;LDAF=0.2112;AVGPOST=0.9957;RSQ=0.9898;ERATE=0.0006;THETA=0.0005;AC=460;AN=2184 GT:DS:GL:BD 0.21062271 0
1 24729022 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.7024;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24729160 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6875;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24729178 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9183;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24729195 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.961;LDAF=0.0245;AVGPOST=0.9991;RSQ=0.9838;ERATE=0.0004;THETA=0.0002;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 24729196 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9422;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24729257 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.894;LDAF=0.0033;AVGPOST=0.9981;RSQ=0.7545;ERATE=0.0012;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24729384 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0021;AVGPOST=0.9975;RSQ=0.5470;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24729635 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0207;AVGPOST=0.9996;RSQ=0.9924;ERATE=0.0003;THETA=0.0006;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 24729646 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.820;LDAF=0.0027;AVGPOST=0.9977;RSQ=0.6575;ERATE=0.0010;THETA=0.0014;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24729764 . GTGTT G 209 PASS INDEL;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0058;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24729919 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0050;AVGPOST=0.9979;RSQ=0.8266;ERATE=0.0004;THETA=0.0023;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 24729971 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6616;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24730027 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.852;LDAF=0.0130;AVGPOST=0.9950;RSQ=0.8614;ERATE=0.0003;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 24730157 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=0.9986;RSQ=0.7200;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24730160 . AT A 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.736;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6313;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24730186 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.758;LDAF=0.0041;AVGPOST=0.9951;RSQ=0.6053;ERATE=0.0007;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24730232 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3707;AVGPOST=0.9973;RSQ=0.9955;ERATE=0.0004;THETA=0.0008;AC=809;AN=2184 GT:DS:GL:BD 0.37042123 0
1 24730268 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.958;LDAF=0.0482;AVGPOST=0.9982;RSQ=0.9855;ERATE=0.0004;THETA=0.0004;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 24730306 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0022;AVGPOST=0.9991;RSQ=0.8141;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24730364 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2935;AVGPOST=0.9982;RSQ=0.9964;ERATE=0.0005;THETA=0.0004;AC=640;AN=2184 GT:DS:GL:BD 0.29304031 0
1 24730368 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24730662 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.722;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6448;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24730664 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.797;LDAF=0.0082;AVGPOST=0.9959;RSQ=0.7955;ERATE=0.0005;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 24730871 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0388;AVGPOST=0.9990;RSQ=0.9914;ERATE=0.0003;THETA=0.0002;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 24730903 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4133;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24730937 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2896;AVGPOST=0.9992;RSQ=0.9983;ERATE=0.0005;THETA=0.0004;AC=633;AN=2184 GT:DS:GL:BD 0.28983516 0
1 24731000 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.849;LDAF=0.0059;AVGPOST=0.9985;RSQ=0.9044;ERATE=0.0004;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 24731049 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.3794;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24731079 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24731093 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.947;LDAF=0.0120;AVGPOST=0.9986;RSQ=0.9492;ERATE=0.0004;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 24731141 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4708;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24731155 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.753;LDAF=0.0043;AVGPOST=0.9983;RSQ=0.8248;ERATE=0.0005;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 24731161 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7202;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24731295 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7718;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24731317 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0036;AVGPOST=0.9987;RSQ=0.8540;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 24731581 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0477;AVGPOST=0.9994;RSQ=0.9945;ERATE=0.0004;THETA=0.0003;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 24731659 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2143;AVGPOST=0.9885;RSQ=0.9757;ERATE=0.0008;THETA=0.0007;AC=469;AN=2184 GT:DS:GL:BD 0.21474358 0
1 24731667 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0021;AVGPOST=0.9980;RSQ=0.5686;ERATE=0.0006;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24731690 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0752;AVGPOST=0.9991;RSQ=0.9944;ERATE=0.0004;THETA=0.0003;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 24731737 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2932;AVGPOST=0.9976;RSQ=0.9951;ERATE=0.0008;THETA=0.0004;AC=640;AN=2184 GT:DS:GL:BD 0.29304031 0
1 24731812 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6294;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24731835 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0184;AVGPOST=0.9997;RSQ=0.9938;ERATE=0.0003;THETA=0.0002;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 24731960 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=0.9981;RSQ=0.8566;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 24732044 . GTTC G 34 PASS INDEL;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5198;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24732047 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.813;LDAF=0.0040;AVGPOST=0.9976;RSQ=0.7770;ERATE=0.0006;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24732195 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0025;AVGPOST=0.9985;RSQ=0.7801;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24732203 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4977;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24732256 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6846;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24732362 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0482;AVGPOST=0.9988;RSQ=0.9932;ERATE=0.0004;THETA=0.0003;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 24732588 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2932;AVGPOST=0.9981;RSQ=0.9960;ERATE=0.0006;THETA=0.0005;AC=640;AN=2184 GT:DS:GL:BD 0.29304031 0
1 24732606 rs57716623 TA T 27781 PASS INDEL;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2918;AVGPOST=0.9973;RSQ=0.9943;ERATE=0.0006;THETA=0.0005;AC=638;AN=2184 GT:DS:GL:BD 0.29212454 0
1 24732662 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0088;AVGPOST=0.9972;RSQ=0.8906;ERATE=0.0004;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 24732746 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0078;AVGPOST=0.9997;RSQ=0.9811;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 24732854 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3376;AVGPOST=0.9931;RSQ=0.9877;ERATE=0.0014;THETA=0.0002;AC=737;AN=2184 GT:DS:GL:BD 0.33745420 0
1 24732900 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5919;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24732976 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0477;AVGPOST=0.9995;RSQ=0.9961;ERATE=0.0004;THETA=0.0002;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 24733051 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8678;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24733098 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.587;LDAF=0.0018;AVGPOST=0.9979;RSQ=0.5560;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24733302 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24733359 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.825;LDAF=0.0072;AVGPOST=0.9936;RSQ=0.6801;ERATE=0.0006;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 24733448 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6830;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24733472 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0209;AVGPOST=0.9994;RSQ=0.9885;ERATE=0.0003;THETA=0.0005;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 24733637 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.739;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6825;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24733731 . T TC 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0026;AVGPOST=0.9988;RSQ=0.7873;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24733836 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.870;LDAF=0.0043;AVGPOST=0.9973;RSQ=0.8167;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 24733862 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5543;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24733993 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.741;LDAF=0.0014;AVGPOST=0.9979;RSQ=0.4534;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24734000 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0759;AVGPOST=0.9964;RSQ=0.9803;ERATE=0.0004;THETA=0.0006;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 24734181 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.676;LDAF=0.0110;AVGPOST=0.9833;RSQ=0.4044;ERATE=0.0023;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 24734203 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.696;LDAF=0.0054;AVGPOST=0.9917;RSQ=0.4057;ERATE=0.0012;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24734222 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0754;AVGPOST=0.9988;RSQ=0.9929;ERATE=0.0004;THETA=0.0003;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 24734386 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2140;AVGPOST=0.9981;RSQ=0.9952;ERATE=0.0004;THETA=0.0007;AC=466;AN=2184 GT:DS:GL:BD 0.21336997 0
1 24734453 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=0.9999;RSQ=0.0499;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 24734535 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.889;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9400;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 24734626 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24734633 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0385;AVGPOST=0.9997;RSQ=0.9970;ERATE=0.0003;THETA=0.0003;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 24734639 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24734842 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0018;AVGPOST=0.9993;RSQ=0.8546;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24734999 . CTTATTT C 230 PASS INDEL;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0025;AVGPOST=0.9971;RSQ=0.5459;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24735094 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0049;AVGPOST=0.9984;RSQ=0.8731;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 24735098 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.944;LDAF=0.0131;AVGPOST=0.9992;RSQ=0.9706;ERATE=0.0004;THETA=0.0002;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 24735129 . A AT 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4341;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24735363 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0855;AVGPOST=0.9982;RSQ=0.9921;ERATE=0.0004;THETA=0.0005;AC=186;AN=2184 GT:DS:GL:BD 0.08516484 0
1 24735393 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.774;LDAF=0.0055;AVGPOST=0.9982;RSQ=0.8852;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 24735545 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0114;AVGPOST=0.9989;RSQ=0.9540;ERATE=0.0007;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 24735632 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7946;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24735786 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0106;AVGPOST=0.9988;RSQ=0.9485;ERATE=0.0004;THETA=0.0007;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 24735804 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.803;LDAF=0.0113;AVGPOST=0.9972;RSQ=0.8846;ERATE=0.0006;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 24735868 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0753;AVGPOST=0.9993;RSQ=0.9956;ERATE=0.0004;THETA=0.0006;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 24736026 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7619;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24736061 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.979;LDAF=0.0303;AVGPOST=0.9986;RSQ=0.9809;ERATE=0.0003;THETA=0.0005;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 24736154 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24736180 . T TA 20 PASS INDEL;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0016;AVGPOST=0.9981;RSQ=0.5213;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24736246 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0056;AVGPOST=0.9991;RSQ=0.9399;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 24736260 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=0.9998;RSQ=0.9528;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24736316 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5900;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24736379 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9767;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 24736438 . GA G 65 PASS INDEL;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24736462 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8756;ERATE=0.0005;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24736474 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24736628 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.8033;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24736853 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0753;AVGPOST=0.9989;RSQ=0.9934;ERATE=0.0004;THETA=0.0003;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 24736984 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24737014 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24737035 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.968;LDAF=0.6233;AVGPOST=0.9762;RSQ=0.9613;ERATE=0.0054;THETA=0.0004;AC=1373;AN=2184 GT:DS:GL:BD 0.62866300 1
1 24737133 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24737145 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8416;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24737356 . GT G 2820 PASS INDEL;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0197;AVGPOST=0.9960;RSQ=0.9149;ERATE=0.0006;THETA=0.0003;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 24737396 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6850;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24737527 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0243;AVGPOST=0.9996;RSQ=0.9938;ERATE=0.0003;THETA=0.0003;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 24737607 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24737610 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0108;AVGPOST=0.9994;RSQ=0.9765;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 24737646 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6347;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24737651 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24737695 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2139;AVGPOST=0.9995;RSQ=0.9987;ERATE=0.0003;THETA=0.0005;AC=466;AN=2184 GT:DS:GL:BD 0.21336997 0
1 24737809 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24737865 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0079;AVGPOST=0.9998;RSQ=0.9891;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 24738152 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24738175 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7011;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24738220 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5543;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24738227 . AC A 674 PASS INDEL;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0045;AVGPOST=0.9989;RSQ=0.9157;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 24738244 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0050;AVGPOST=0.9979;RSQ=0.8369;ERATE=0.0005;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 24738446 rs11317664 CT C 7682 PASS INDEL;BAVGPOST=0.895;BRSQ=0.742;LDAF=0.2063;AVGPOST=0.9128;RSQ=0.8265;ERATE=0.0031;THETA=0.0003;AC=447;AN=2184 GT:DS:GL:BD 0.20467032 0
1 24738450 rs10534572 TTTTC T 24966 PASS INDEL;BAVGPOST=0.985;BRSQ=0.962;LDAF=0.2152;AVGPOST=0.9951;RSQ=0.9879;ERATE=0.0007;THETA=0.0005;AC=470;AN=2184 GT:DS:GL:BD 0.21520147 0
1 24738465 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0184;AVGPOST=0.9998;RSQ=0.9953;ERATE=0.0003;THETA=0.0005;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 24738466 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0211;AVGPOST=0.9988;RSQ=0.9787;ERATE=0.0004;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 24738491 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3144;AVGPOST=0.9969;RSQ=0.9947;ERATE=0.0003;THETA=0.0003;AC=687;AN=2184 GT:DS:GL:BD 0.31456044 0
1 24738496 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24738520 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.6106;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24738521 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24738698 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24738731 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.9008;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24738809 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0209;AVGPOST=0.9992;RSQ=0.9831;ERATE=0.0004;THETA=0.0004;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 24738842 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0873;AVGPOST=0.9964;RSQ=0.9848;ERATE=0.0003;THETA=0.0003;AC=190;AN=2184 GT:DS:GL:BD 0.08699634 0
1 24738983 rs71589762 CTTTA C 12354 PASS INDEL;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0861;AVGPOST=0.9989;RSQ=0.9941;ERATE=0.0005;THETA=0.0004;AC=188;AN=2184 GT:DS:GL:BD 0.08608059 0
1 24739064 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0860;AVGPOST=0.9994;RSQ=0.9969;ERATE=0.0003;THETA=0.0004;AC=188;AN=2184 GT:DS:GL:BD 0.08608059 0
1 24739097 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0027;AVGPOST=0.9973;RSQ=0.6741;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24739197 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24739220 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.984;LDAF=0.3969;AVGPOST=0.9936;RSQ=0.9891;ERATE=0.0010;THETA=0.0003;AC=869;AN=2184 GT:DS:GL:BD 0.39789379 0
1 24739235 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0187;AVGPOST=0.9988;RSQ=0.9760;ERATE=0.0003;THETA=0.0006;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 24739246 . GGAAT G 87 PASS INDEL;BAVGPOST=0.997;BRSQ=0.770;LDAF=0.0139;AVGPOST=0.9873;RSQ=0.6285;ERATE=0.0037;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 24739271 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.729;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5519;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24739279 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7141;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24739358 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0024;AVGPOST=0.9990;RSQ=0.8352;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24739396 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0051;AVGPOST=0.9984;RSQ=0.8567;ERATE=0.0005;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 24739445 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.8406;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24739472 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6426;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24739745 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2932;AVGPOST=0.9960;RSQ=0.9924;ERATE=0.0004;THETA=0.0003;AC=639;AN=2184 GT:DS:GL:BD 0.29258242 0
1 24739773 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2896;AVGPOST=0.9984;RSQ=0.9968;ERATE=0.0003;THETA=0.0004;AC=632;AN=2184 GT:DS:GL:BD 0.28937730 0
1 24739862 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0179;AVGPOST=0.9944;RSQ=0.8999;ERATE=0.0003;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 24739960 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2168;AVGPOST=0.9979;RSQ=0.9949;ERATE=0.0006;THETA=0.0004;AC=472;AN=2184 GT:DS:GL:BD 0.21611722 0
1 24739984 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0023;AVGPOST=0.9976;RSQ=0.5161;ERATE=0.0006;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24739993 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.748;LDAF=0.0029;AVGPOST=0.9986;RSQ=0.8350;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24740108 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0059;AVGPOST=0.9944;RSQ=0.6719;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 24740112 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0782;AVGPOST=0.9922;RSQ=0.9584;ERATE=0.0007;THETA=0.0002;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 24740212 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5682;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24740225 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2139;AVGPOST=0.9989;RSQ=0.9973;ERATE=0.0004;THETA=0.0002;AC=466;AN=2184 GT:DS:GL:BD 0.21336997 0
1 24740343 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.755;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4107;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24740358 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9572;ERATE=0.0003;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 24740389 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24740398 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24740451 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0019;AVGPOST=0.9973;RSQ=0.3583;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24740494 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6570;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24740582 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0384;AVGPOST=0.9999;RSQ=0.9990;ERATE=0.0003;THETA=0.0004;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 24740713 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.2894;AVGPOST=0.9957;RSQ=0.9915;ERATE=0.0009;THETA=0.0004;AC=634;AN=2184 GT:DS:GL:BD 0.29029304 0
1 24740827 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0189;AVGPOST=0.9986;RSQ=0.9663;ERATE=0.0007;THETA=0.0006;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 24741067 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.851;LDAF=0.0123;AVGPOST=0.9943;RSQ=0.8131;ERATE=0.0006;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 24741081 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.2917;AVGPOST=0.9940;RSQ=0.9881;ERATE=0.0009;THETA=0.0005;AC=639;AN=2184 GT:DS:GL:BD 0.29258242 0
1 24741185 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.2194;AVGPOST=0.9890;RSQ=0.9769;ERATE=0.0020;THETA=0.0004;AC=474;AN=2184 GT:DS:GL:BD 0.21703297 0
1 24741327 . AT A 52 PASS INDEL;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.5402;ERATE=0.0006;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24741353 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0770;AVGPOST=0.9976;RSQ=0.9859;ERATE=0.0004;THETA=0.0003;AC=167;AN=2184 GT:DS:GL:BD 0.07646520 0
1 24741380 . G GC 108 PASS INDEL;BAVGPOST=0.999;BRSQ=0.627;LDAF=0.0032;AVGPOST=0.9954;RSQ=0.4774;ERATE=0.0005;THETA=0.0019;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24741395 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0030;AVGPOST=0.9989;RSQ=0.8468;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24741577 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6616;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24741644 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9347;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24741819 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2026;AVGPOST=0.9992;RSQ=0.9978;ERATE=0.0003;THETA=0.0003;AC=441;AN=2184 GT:DS:GL:BD 0.20192307 0
1 24741865 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0078;AVGPOST=0.9996;RSQ=0.9791;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 24742025 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0280;AVGPOST=0.9987;RSQ=0.9783;ERATE=0.0004;THETA=0.0004;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 24742112 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0808;AVGPOST=0.9953;RSQ=0.9781;ERATE=0.0003;THETA=0.0004;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 24742116 . C CT 84 PASS INDEL;BAVGPOST=1.000;BRSQ=0.685;LDAF=0.0035;AVGPOST=0.9962;RSQ=0.5482;ERATE=0.0005;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24742152 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.832;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6094;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24742178 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.746;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.5053;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24742201 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0021;AVGPOST=0.9976;RSQ=0.5180;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24742249 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0024;AVGPOST=0.9975;RSQ=0.6389;ERATE=0.0004;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24742263 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0150;AVGPOST=0.9996;RSQ=0.9896;ERATE=0.0003;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 24742271 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.764;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5228;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24742324 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0085;AVGPOST=0.9977;RSQ=0.8815;ERATE=0.0006;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 24742415 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24742523 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5030;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24742597 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24742798 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0135;AVGPOST=0.9984;RSQ=0.9585;ERATE=0.0003;THETA=0.0013;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 24742986 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3136;AVGPOST=0.9976;RSQ=0.9955;ERATE=0.0004;THETA=0.0003;AC=686;AN=2184 GT:DS:GL:BD 0.31410256 0
1 24743106 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9232;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 24743214 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0143;AVGPOST=0.9998;RSQ=0.9928;ERATE=0.0003;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 24743223 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0150;AVGPOST=0.9996;RSQ=0.9896;ERATE=0.0003;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 24743314 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9865;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24743439 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8194;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24743493 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0758;AVGPOST=0.9979;RSQ=0.9903;ERATE=0.0003;THETA=0.0002;AC=165;AN=2184 GT:DS:GL:BD 0.07554945 0
1 24743580 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.754;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6944;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24743603 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0855;AVGPOST=0.9990;RSQ=0.9952;ERATE=0.0004;THETA=0.0002;AC=187;AN=2184 GT:DS:GL:BD 0.08562271 0
1 24743696 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24743762 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0207;AVGPOST=0.9997;RSQ=0.9942;ERATE=0.0003;THETA=0.0004;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 24743783 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2018;AVGPOST=0.9982;RSQ=0.9960;ERATE=0.0004;THETA=0.0004;AC=439;AN=2184 GT:DS:GL:BD 0.20100732 0
1 24743879 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2149;AVGPOST=0.9988;RSQ=0.9972;ERATE=0.0003;THETA=0.0003;AC=467;AN=2184 GT:DS:GL:BD 0.21382783 0
1 24744256 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8708;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24744306 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.776;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7386;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24744310 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.8057;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24744322 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24744431 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.944;LDAF=0.0096;AVGPOST=0.9974;RSQ=0.8877;ERATE=0.0004;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 24744449 . AAAAT A 1032 PASS INDEL;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9865;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24744458 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0118;AVGPOST=0.9991;RSQ=0.9731;ERATE=0.0003;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 24744601 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0078;AVGPOST=0.9995;RSQ=0.9739;ERATE=0.0004;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 24744826 . CTGTT C 578 PASS INDEL;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0040;AVGPOST=0.9988;RSQ=0.8598;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 24744850 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24744886 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24744992 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0079;AVGPOST=0.9990;RSQ=0.9474;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 24745065 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.755;LDAF=0.0027;AVGPOST=0.9979;RSQ=0.6737;ERATE=0.0006;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24745070 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.7426;AVGPOST=0.9984;RSQ=0.9961;ERATE=0.0004;THETA=0.0003;AC=1622;AN=2184 GT:DS:GL:BD 0.74267399 1
1 24745112 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.6858;AVGPOST=0.9989;RSQ=0.9977;ERATE=0.0004;THETA=0.0006;AC=1498;AN=2184 GT:DS:GL:BD 0.68589741 1
1 24745162 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8374;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24745254 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0031;AVGPOST=0.9991;RSQ=0.8819;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24745381 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0023;AVGPOST=0.9982;RSQ=0.6690;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24745586 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9452;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24745592 . AG A 97 PASS INDEL;BAVGPOST=1.000;BRSQ=0.765;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5729;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24745615 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3968;AVGPOST=0.9991;RSQ=0.9986;ERATE=0.0003;THETA=0.0005;AC=867;AN=2184 GT:DS:GL:BD 0.39697802 0
1 24745704 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2121;AVGPOST=0.9990;RSQ=0.9974;ERATE=0.0003;THETA=0.0009;AC=462;AN=2184 GT:DS:GL:BD 0.21153846 0
1 24746025 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24746043 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24746056 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0068;AVGPOST=0.9993;RSQ=0.9622;ERATE=0.0037;THETA=0.0024;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 24746127 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0027;AVGPOST=1.0000;RSQ=0.9920;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24746168 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0039;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24746205 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3144;AVGPOST=0.9998;RSQ=0.9997;ERATE=0.0003;THETA=0.0003;AC=687;AN=2184 GT:DS:GL:BD 0.31456044 0
1 24746249 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24746271 . G GA 51 PASS INDEL;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5802;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24746361 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24746433 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0767;AVGPOST=0.9981;RSQ=0.9890;ERATE=0.0005;THETA=0.0003;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 24746664 . GC G 82 PASS INDEL;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5400;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24746719 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.722;LDAF=0.0066;AVGPOST=0.9965;RSQ=0.7910;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 24746746 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.797;LDAF=0.0021;AVGPOST=0.9976;RSQ=0.5249;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24746747 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0041;AVGPOST=0.9945;RSQ=0.5311;ERATE=0.0006;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24746752 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.696;LDAF=0.0015;AVGPOST=0.9983;RSQ=0.6003;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24746835 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.723;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4343;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24746874 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8864;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24746972 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7027;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24747005 . G GTA 919 PASS INDEL;BAVGPOST=0.994;BRSQ=0.736;LDAF=0.0186;AVGPOST=0.9840;RSQ=0.6497;ERATE=0.0035;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 24747068 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7067;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24747084 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.945;LDAF=0.0132;AVGPOST=0.9989;RSQ=0.9646;ERATE=0.0004;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 24747095 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24747162 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24747185 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2119;AVGPOST=0.9986;RSQ=0.9964;ERATE=0.0004;THETA=0.0002;AC=461;AN=2184 GT:DS:GL:BD 0.21108058 0
1 24747228 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0768;AVGPOST=0.9980;RSQ=0.9901;ERATE=0.0003;THETA=0.0006;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 24747236 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0004;AVGPOST=0.9995;RSQ=0.5372;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 24747391 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24747467 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0761;AVGPOST=0.9995;RSQ=0.9971;ERATE=0.0003;THETA=0.0002;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 24747557 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0330;AVGPOST=0.9988;RSQ=0.9884;ERATE=0.0004;THETA=0.0004;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 24747572 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6134;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24747592 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9799;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24747624 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.2954;AVGPOST=0.9966;RSQ=0.9931;ERATE=0.0007;THETA=0.0006;AC=644;AN=2184 GT:DS:GL:BD 0.29487181 0
1 24747653 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0184;AVGPOST=0.9996;RSQ=0.9896;ERATE=0.0004;THETA=0.0002;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 24747682 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3272;AVGPOST=0.9965;RSQ=0.9932;ERATE=0.0008;THETA=0.0004;AC=714;AN=2184 GT:DS:GL:BD 0.32692307 0
1 24747795 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6607;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24747841 . C CA 1656 PASS INDEL;BAVGPOST=0.989;BRSQ=0.841;LDAF=0.0440;AVGPOST=0.9704;RSQ=0.7254;ERATE=0.0064;THETA=0.0003;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 24747843 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.570;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7111;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24747883 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0026;AVGPOST=0.9967;RSQ=0.6018;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24748132 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7344;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24748164 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6963;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24748306 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7209;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24748310 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0779;AVGPOST=0.9993;RSQ=0.9962;ERATE=0.0003;THETA=0.0004;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 24748337 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0076;AVGPOST=0.9994;RSQ=0.9687;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 24748346 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6526;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24748363 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5672;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24748469 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8174;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24748580 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8297;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24748611 . ACT A 390 PASS INDEL;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7960;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24748687 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.776;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8519;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24748700 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0066;AVGPOST=0.9991;RSQ=0.9417;ERATE=0.0005;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 24748774 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0758;AVGPOST=0.9996;RSQ=0.9975;ERATE=0.0003;THETA=0.0002;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 24748829 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2911;AVGPOST=0.9992;RSQ=0.9984;ERATE=0.0004;THETA=0.0002;AC=636;AN=2184 GT:DS:GL:BD 0.29120880 0
1 24749010 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0040;AVGPOST=0.9999;RSQ=0.9855;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 24749079 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2109;AVGPOST=0.9995;RSQ=0.9988;ERATE=0.0003;THETA=0.0003;AC=459;AN=2184 GT:DS:GL:BD 0.21016483 0
1 24749238 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24749270 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24749298 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0022;AVGPOST=0.9998;RSQ=0.9621;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24749327 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.7441;AVGPOST=0.9987;RSQ=0.9973;ERATE=0.0004;THETA=0.0002;AC=1624;AN=2184 GT:DS:GL:BD 0.74358976 1
1 24749377 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3284;AVGPOST=0.9985;RSQ=0.9976;ERATE=0.0004;THETA=0.0002;AC=716;AN=2184 GT:DS:GL:BD 0.32783884 0
1 24749706 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2954;AVGPOST=0.9976;RSQ=0.9955;ERATE=0.0006;THETA=0.0003;AC=644;AN=2184 GT:DS:GL:BD 0.29487181 0
1 24749734 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24749935 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0578;AVGPOST=0.9981;RSQ=0.9864;ERATE=0.0006;THETA=0.0023;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 24749946 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.946;LDAF=0.6173;AVGPOST=0.9471;RSQ=0.9165;ERATE=0.0138;THETA=0.0006;AC=1363;AN=2184 GT:DS:GL:BD 0.62408423 1
1 24749953 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0092;AVGPOST=0.9977;RSQ=0.9085;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 24750062 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.675;LDAF=0.0101;AVGPOST=0.9933;RSQ=0.7208;ERATE=0.0009;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 24750069 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0047;AVGPOST=0.9981;RSQ=0.8237;ERATE=0.0005;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 24750105 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.830;LDAF=0.0206;AVGPOST=0.9826;RSQ=0.6725;ERATE=0.0061;THETA=0.0006;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 24750116 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.839;LDAF=0.0167;AVGPOST=0.9847;RSQ=0.6565;ERATE=0.0037;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 24750128 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24750131 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.969;LDAF=0.7159;AVGPOST=0.9643;RSQ=0.9351;ERATE=0.0125;THETA=0.0004;AC=1580;AN=2184 GT:DS:GL:BD 0.72344321 1
1 24750211 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24750354 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.912;LDAF=0.0056;AVGPOST=0.9984;RSQ=0.8952;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 24750476 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0152;AVGPOST=0.9997;RSQ=0.9904;ERATE=0.0003;THETA=0.0006;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 24750498 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24750593 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0034;AVGPOST=0.9997;RSQ=0.9551;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24750606 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24750846 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9670;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24750878 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.0272;AVGPOST=0.9994;RSQ=0.9901;ERATE=0.0003;THETA=0.0006;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 24750974 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0076;AVGPOST=0.9995;RSQ=0.9751;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 24750992 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0094;AVGPOST=0.9979;RSQ=0.9170;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 24751002 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6347;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24751037 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8182;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24751197 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.7441;AVGPOST=0.9966;RSQ=0.9935;ERATE=0.0004;THETA=0.0004;AC=1624;AN=2184 GT:DS:GL:BD 0.74358976 1
1 24751254 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6272;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24751282 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.3831;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24751314 . TA T 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.767;LDAF=0.0029;AVGPOST=0.9969;RSQ=0.5976;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24751485 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6955;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24751495 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24751627 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.733;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4757;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24751656 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7349;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24751773 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.989;LDAF=0.2900;AVGPOST=0.9931;RSQ=0.9882;ERATE=0.0011;THETA=0.0003;AC=635;AN=2184 GT:DS:GL:BD 0.29075092 0
1 24751774 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.9013;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24751809 rs56889050 AT A 21294 PASS INDEL;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.3283;AVGPOST=0.9962;RSQ=0.9929;ERATE=0.0010;THETA=0.0006;AC=718;AN=2184 GT:DS:GL:BD 0.32875457 0
1 24751877 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.750;LDAF=0.0029;AVGPOST=0.9984;RSQ=0.8020;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24751920 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6882;AVGPOST=0.9985;RSQ=0.9972;ERATE=0.0004;THETA=0.0002;AC=1503;AN=2184 GT:DS:GL:BD 0.68818682 1
1 24751981 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.785;LDAF=0.0036;AVGPOST=0.9990;RSQ=0.8888;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24751987 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0079;AVGPOST=0.9998;RSQ=0.9863;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 24752017 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0145;AVGPOST=0.9993;RSQ=0.9821;ERATE=0.0003;THETA=0.0002;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 24752034 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7569;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24752056 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6419;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24752283 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9555;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24752319 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0148;AVGPOST=0.9978;RSQ=0.9589;ERATE=0.0003;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 24752544 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0011;AVGPOST=0.9982;RSQ=0.3605;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24752547 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0022;AVGPOST=0.9980;RSQ=0.6231;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24752573 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7856;AVGPOST=0.9983;RSQ=0.9954;ERATE=0.0004;THETA=0.0003;AC=1715;AN=2184 GT:DS:GL:BD 0.78525639 1
1 24752582 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0089;AVGPOST=0.9995;RSQ=0.9762;ERATE=0.0004;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 24752583 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5526;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24752717 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0057;AVGPOST=0.9992;RSQ=0.9365;ERATE=0.0004;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 24752730 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2124;AVGPOST=0.9990;RSQ=0.9977;ERATE=0.0004;THETA=0.0019;AC=462;AN=2184 GT:DS:GL:BD 0.21153846 0
1 24752742 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24752760 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0024;AVGPOST=0.9985;RSQ=0.7630;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24752866 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2902;AVGPOST=0.9956;RSQ=0.9918;ERATE=0.0006;THETA=0.0005;AC=635;AN=2184 GT:DS:GL:BD 0.29075092 0
1 24752943 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.978;LDAF=0.7808;AVGPOST=0.9906;RSQ=0.9785;ERATE=0.0010;THETA=0.0003;AC=1709;AN=2184 GT:DS:GL:BD 0.78250915 1
1 24752976 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4988;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24753131 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6678;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24753154 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5682;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24753164 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2914;AVGPOST=0.9971;RSQ=0.9950;ERATE=0.0005;THETA=0.0003;AC=638;AN=2184 GT:DS:GL:BD 0.29212454 0
1 24753298 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0045;AVGPOST=0.9972;RSQ=0.7926;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 24753310 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3276;AVGPOST=0.9991;RSQ=0.9982;ERATE=0.0004;THETA=0.0006;AC=716;AN=2184 GT:DS:GL:BD 0.32783884 0
1 24753350 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0030;AVGPOST=0.9984;RSQ=0.8186;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24753431 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0017;AVGPOST=0.9982;RSQ=0.6040;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24753482 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8313;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24753489 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8454;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24753690 . A AG 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0021;AVGPOST=0.9983;RSQ=0.6755;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24753761 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6651;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24753768 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.6173;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24753849 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0028;AVGPOST=0.9996;RSQ=0.9431;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24753860 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6283;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24754053 . A AT 37 PASS INDEL;BAVGPOST=0.991;BRSQ=0.504;LDAF=0.0187;AVGPOST=0.9737;RSQ=0.4499;ERATE=0.0062;THETA=0.0009;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 24754198 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.621;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5839;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24754254 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0075;AVGPOST=0.9987;RSQ=0.9266;ERATE=0.0003;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 24754259 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.8910;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24754268 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2115;AVGPOST=0.9987;RSQ=0.9970;ERATE=0.0005;THETA=0.0004;AC=460;AN=2184 GT:DS:GL:BD 0.21062271 0
1 24754311 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7417;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24754406 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2942;AVGPOST=0.9980;RSQ=0.9959;ERATE=0.0006;THETA=0.0003;AC=643;AN=2184 GT:DS:GL:BD 0.29441392 0
1 24754426 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6458;AVGPOST=0.9991;RSQ=0.9982;ERATE=0.0003;THETA=0.0003;AC=1410;AN=2184 GT:DS:GL:BD 0.64560437 1
1 24754469 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.689;LDAF=0.0033;AVGPOST=0.9984;RSQ=0.8173;ERATE=0.0005;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24754519 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.871;LDAF=0.0074;AVGPOST=0.9990;RSQ=0.9419;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 24754520 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4473;AVGPOST=0.9920;RSQ=0.9891;ERATE=0.0015;THETA=0.0003;AC=979;AN=2184 GT:DS:GL:BD 0.44826007 0
1 24754594 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.932;LDAF=0.0254;AVGPOST=0.9948;RSQ=0.9263;ERATE=0.0004;THETA=0.0003;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 24754687 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0037;AVGPOST=0.9991;RSQ=0.8856;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24754706 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0022;AVGPOST=0.9986;RSQ=0.7179;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24754899 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.5427;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24754919 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.983;LDAF=0.1195;AVGPOST=0.9986;RSQ=0.9951;ERATE=0.0005;THETA=0.0013;AC=261;AN=2184 GT:DS:GL:BD 0.11950549 0
1 24755003 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0986;AVGPOST=0.9994;RSQ=0.9976;ERATE=0.0003;THETA=0.0003;AC=215;AN=2184 GT:DS:GL:BD 0.09844323 0
1 24755008 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.2918;AVGPOST=0.9980;RSQ=0.9964;ERATE=0.0006;THETA=0.0002;AC=636;AN=2184 GT:DS:GL:BD 0.29120880 0
1 24755065 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7551;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24755114 . TC T 32 PASS INDEL;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8282;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24755149 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24755204 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2923;AVGPOST=0.9987;RSQ=0.9975;ERATE=0.0006;THETA=0.0002;AC=639;AN=2184 GT:DS:GL:BD 0.29258242 0
1 24755211 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5911;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24755232 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24755281 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4140;AVGPOST=0.9972;RSQ=0.9956;ERATE=0.0005;THETA=0.0004;AC=906;AN=2184 GT:DS:GL:BD 0.41483516 0
1 24755286 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0114;AVGPOST=0.9998;RSQ=0.9934;ERATE=0.0003;THETA=0.0034;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 24755438 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.4139;AVGPOST=0.9985;RSQ=0.9975;ERATE=0.0005;THETA=0.0004;AC=903;AN=2184 GT:DS:GL:BD 0.41346154 0
1 24755484 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.822;LDAF=0.0044;AVGPOST=0.9963;RSQ=0.6601;ERATE=0.0009;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24755499 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7608;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24755533 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9670;ERATE=0.0003;THETA=0.0025;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24755534 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0205;AVGPOST=0.9993;RSQ=0.9876;ERATE=0.0004;THETA=0.0002;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 24755704 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9490;ERATE=0.0004;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 24755844 rs71032812 C CA 119061 PASS INDEL;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.9862;AVGPOST=0.9963;RSQ=0.8938;ERATE=0.0003;THETA=0.0003;AC=2155;AN=2184 GT:DS:GL:BD 0.98672163 1
1 24755993 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.4450;AVGPOST=0.9980;RSQ=0.9973;ERATE=0.0005;THETA=0.0003;AC=972;AN=2184 GT:DS:GL:BD 0.44505495 0
1 24756178 . T TG 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.5455;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24756214 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0042;AVGPOST=0.9991;RSQ=0.9358;ERATE=0.0004;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 24756239 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24756255 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6530;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24756257 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9149;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24756258 . TTTACTGG T 224 PASS INDEL;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6274;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24756330 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0062;AVGPOST=0.9963;RSQ=0.8216;ERATE=0.0004;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 24756419 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.7278;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24756432 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24756442 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0076;AVGPOST=0.9975;RSQ=0.8916;ERATE=0.0004;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 24756447 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.891;LDAF=0.0062;AVGPOST=0.9984;RSQ=0.9174;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 24756474 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.4128;AVGPOST=0.9935;RSQ=0.9903;ERATE=0.0009;THETA=0.0008;AC=898;AN=2184 GT:DS:GL:BD 0.41117215 0
1 24756479 . ATTT A 80 PASS INDEL;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.5372;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24756647 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7452;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24756780 rs71032814 T TGGAGTGCA 37782 PASS INDEL;BAVGPOST=0.937;BRSQ=0.875;LDAF=0.3191;AVGPOST=0.9835;RSQ=0.9713;ERATE=0.0030;THETA=0.0002;AC=704;AN=2184 GT:DS:GL:BD 0.32234433 0
1 24756803 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.1172;AVGPOST=0.9960;RSQ=0.9876;ERATE=0.0004;THETA=0.0002;AC=257;AN=2184 GT:DS:GL:BD 0.11767399 0
1 24756867 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4134;AVGPOST=0.9923;RSQ=0.9890;ERATE=0.0013;THETA=0.0004;AC=901;AN=2184 GT:DS:GL:BD 0.41254580 0
1 24756940 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.981;LDAF=0.4121;AVGPOST=0.9881;RSQ=0.9824;ERATE=0.0022;THETA=0.0003;AC=899;AN=2184 GT:DS:GL:BD 0.41163003 0
1 24757024 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.7447;AVGPOST=0.9941;RSQ=0.9881;ERATE=0.0011;THETA=0.0002;AC=1628;AN=2184 GT:DS:GL:BD 0.74542123 1
1 24757030 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8879;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24757121 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24757129 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4139;AVGPOST=0.9967;RSQ=0.9950;ERATE=0.0006;THETA=0.0003;AC=904;AN=2184 GT:DS:GL:BD 0.41391942 0
1 24757191 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9721;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24757208 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2075;AVGPOST=0.9993;RSQ=0.9981;ERATE=0.0004;THETA=0.0006;AC=452;AN=2184 GT:DS:GL:BD 0.20695971 0
1 24757219 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0178;AVGPOST=0.9996;RSQ=0.9893;ERATE=0.0003;THETA=0.0006;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 24757341 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4145;AVGPOST=0.9983;RSQ=0.9970;ERATE=0.0006;THETA=0.0004;AC=905;AN=2184 GT:DS:GL:BD 0.41437730 0
1 24757349 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0128;AVGPOST=0.9992;RSQ=0.9752;ERATE=0.0004;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 24757388 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5966;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24757524 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0029;AVGPOST=0.9993;RSQ=0.8934;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24757608 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5865;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24757680 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.789;LDAF=0.0018;AVGPOST=0.9993;RSQ=0.8355;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24757692 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.800;LDAF=0.0046;AVGPOST=0.9979;RSQ=0.7977;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 24757696 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24757767 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24757800 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6745;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24757802 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.922;LDAF=0.0131;AVGPOST=0.9984;RSQ=0.9461;ERATE=0.0004;THETA=0.0006;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 24757806 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0747;AVGPOST=0.9983;RSQ=0.9911;ERATE=0.0004;THETA=0.0002;AC=163;AN=2184 GT:DS:GL:BD 0.07463370 0
1 24757836 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6966;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24757857 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24757859 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9988;RSQ=0.9089;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 24757867 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0044;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24757917 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24757939 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6807;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24757994 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.859;LDAF=0.0086;AVGPOST=0.9982;RSQ=0.9076;ERATE=0.0004;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 24758293 . AC A 450 PASS INDEL;BAVGPOST=0.998;BRSQ=0.909;LDAF=0.0063;AVGPOST=0.9968;RSQ=0.8159;ERATE=0.0005;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 24758303 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.966;LDAF=0.0274;AVGPOST=0.9982;RSQ=0.9728;ERATE=0.0003;THETA=0.0004;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 24758400 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6461;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24758444 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24758491 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0066;AVGPOST=0.9994;RSQ=0.9727;ERATE=0.0003;THETA=0.0001;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 24758505 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0042;AVGPOST=0.9995;RSQ=0.9479;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 24758528 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0371;AVGPOST=0.9998;RSQ=0.9974;ERATE=0.0003;THETA=0.0006;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 24758604 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4144;AVGPOST=0.9976;RSQ=0.9963;ERATE=0.0005;THETA=0.0003;AC=906;AN=2184 GT:DS:GL:BD 0.41483516 0
1 24758607 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0741;AVGPOST=0.9988;RSQ=0.9930;ERATE=0.0005;THETA=0.0003;AC=162;AN=2184 GT:DS:GL:BD 0.07417583 0
1 24758683 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4096;AVGPOST=0.9987;RSQ=0.9977;ERATE=0.0006;THETA=0.0002;AC=895;AN=2184 GT:DS:GL:BD 0.40979853 0
1 24758734 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9995;RSQ=0.9673;ERATE=0.0003;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 24758763 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.850;LDAF=0.0036;AVGPOST=0.9991;RSQ=0.9040;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24759025 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0036;AVGPOST=0.9999;RSQ=0.9819;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 24759059 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2944;AVGPOST=0.9969;RSQ=0.9944;ERATE=0.0005;THETA=0.0003;AC=641;AN=2184 GT:DS:GL:BD 0.29349816 0
1 24759213 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.795;LDAF=0.0079;AVGPOST=0.9976;RSQ=0.9132;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 24759339 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.760;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6505;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24759403 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4133;AVGPOST=0.9985;RSQ=0.9977;ERATE=0.0006;THETA=0.0003;AC=902;AN=2184 GT:DS:GL:BD 0.41300365 0
1 24759409 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0075;AVGPOST=0.9987;RSQ=0.9238;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 24759429 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4134;AVGPOST=0.9988;RSQ=0.9980;ERATE=0.0005;THETA=0.0003;AC=902;AN=2184 GT:DS:GL:BD 0.41300365 0
1 24759448 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9678;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 24759450 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24759475 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0410;AVGPOST=0.9993;RSQ=0.9931;ERATE=0.0003;THETA=0.0003;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 24759522 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.898;LDAF=0.0028;AVGPOST=0.9993;RSQ=0.9073;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24759538 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24759614 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0038;AVGPOST=0.9989;RSQ=0.8889;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 24759685 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3301;AVGPOST=0.9991;RSQ=0.9983;ERATE=0.0004;THETA=0.0003;AC=720;AN=2184 GT:DS:GL:BD 0.32967034 0
1 24759846 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8036;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24759874 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0022;AVGPOST=0.9995;RSQ=0.9111;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24759930 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2068;AVGPOST=0.9981;RSQ=0.9957;ERATE=0.0004;THETA=0.0002;AC=451;AN=2184 GT:DS:GL:BD 0.20650183 0
1 24759934 . T TA 36 PASS INDEL;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6569;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24760119 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0205;AVGPOST=0.9991;RSQ=0.9849;ERATE=0.0003;THETA=0.0004;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 24760123 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4131;AVGPOST=0.9996;RSQ=0.9993;ERATE=0.0003;THETA=0.0002;AC=902;AN=2184 GT:DS:GL:BD 0.41300365 0
1 24760186 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.6891;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24760198 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8821;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24760202 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9418;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24760249 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.858;LDAF=0.0133;AVGPOST=0.9972;RSQ=0.9204;ERATE=0.0004;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 24760299 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0274;AVGPOST=0.9984;RSQ=0.9770;ERATE=0.0004;THETA=0.0003;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 24760313 rs34161886 TG T 36176 PASS INDEL;BAVGPOST=0.988;BRSQ=0.980;LDAF=0.4061;AVGPOST=0.9860;RSQ=0.9790;ERATE=0.0042;THETA=0.0003;AC=888;AN=2184 GT:DS:GL:BD 0.40659341 0
1 24760316 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.963;LDAF=0.0132;AVGPOST=0.9979;RSQ=0.9477;ERATE=0.0004;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 24760316 . GA G 1910 PASS INDEL;BAVGPOST=0.877;BRSQ=0.794;LDAF=0.3170;AVGPOST=0.8810;RSQ=0.8249;ERATE=0.0131;THETA=0.0003;AC=714;AN=2184 GT:DS:GL:BD 0.32692307 0
1 24760383 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6106;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24760417 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4136;AVGPOST=0.9947;RSQ=0.9921;ERATE=0.0009;THETA=0.0004;AC=902;AN=2184 GT:DS:GL:BD 0.41300365 0
1 24760430 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.6209;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24760491 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0029;AVGPOST=0.9992;RSQ=0.8751;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24760508 . AG A 70 PASS INDEL;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0036;AVGPOST=0.9962;RSQ=0.6464;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24760633 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7037;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24760654 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1189;AVGPOST=0.9989;RSQ=0.9968;ERATE=0.0004;THETA=0.0004;AC=260;AN=2184 GT:DS:GL:BD 0.11904762 0
1 24760694 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0029;AVGPOST=0.9987;RSQ=0.8460;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24760794 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24760799 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0407;AVGPOST=0.9998;RSQ=0.9976;ERATE=0.0003;THETA=0.0004;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 24760979 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.905;LDAF=0.0059;AVGPOST=0.9995;RSQ=0.9682;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 24760991 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6115;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24761130 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.741;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6365;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24761140 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24761282 . CAA C 110 PASS INDEL;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24761302 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7450;AVGPOST=0.9985;RSQ=0.9965;ERATE=0.0005;THETA=0.0003;AC=1627;AN=2184 GT:DS:GL:BD 0.74496335 1
1 24761391 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4133;AVGPOST=0.9986;RSQ=0.9977;ERATE=0.0004;THETA=0.0003;AC=902;AN=2184 GT:DS:GL:BD 0.41300365 0
1 24761559 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8639;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24761990 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0082;AVGPOST=0.9987;RSQ=0.9296;ERATE=0.0005;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 24762049 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0013;AVGPOST=0.9981;RSQ=0.3932;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24762069 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0839;AVGPOST=0.9995;RSQ=0.9970;ERATE=0.0003;THETA=0.0002;AC=183;AN=2184 GT:DS:GL:BD 0.08379121 0
1 24762150 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0037;AVGPOST=0.9996;RSQ=0.9539;ERATE=0.0003;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 24762259 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8414;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24762386 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8214;ERATE=0.0004;THETA=0.0022;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24762460 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.927;LDAF=0.0225;AVGPOST=0.9968;RSQ=0.9408;ERATE=0.0005;THETA=0.0003;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 24762498 . G GA 42 PASS INDEL;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5647;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24762531 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0028;AVGPOST=0.9993;RSQ=0.8900;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24762558 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7428;AVGPOST=0.9989;RSQ=0.9975;ERATE=0.0005;THETA=0.0004;AC=1622;AN=2184 GT:DS:GL:BD 0.74267399 1
1 24762576 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0367;AVGPOST=0.9991;RSQ=0.9920;ERATE=0.0003;THETA=0.0005;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 24762639 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0826;AVGPOST=0.9989;RSQ=0.9951;ERATE=0.0003;THETA=0.0003;AC=181;AN=2184 GT:DS:GL:BD 0.08287546 0
1 24762711 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0049;AVGPOST=0.9993;RSQ=0.9462;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 24762741 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4119;AVGPOST=0.9973;RSQ=0.9958;ERATE=0.0007;THETA=0.0003;AC=898;AN=2184 GT:DS:GL:BD 0.41117215 0
1 24762742 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0142;AVGPOST=0.9989;RSQ=0.9677;ERATE=0.0005;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 24762934 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0317;AVGPOST=0.9983;RSQ=0.9790;ERATE=0.0004;THETA=0.0002;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 24762987 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.742;LDAF=0.0040;AVGPOST=0.9968;RSQ=0.7202;ERATE=0.0006;THETA=0.0034;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24763000 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.970;LDAF=0.4132;AVGPOST=0.9785;RSQ=0.9707;ERATE=0.0018;THETA=0.0009;AC=900;AN=2184 GT:DS:GL:BD 0.41208792 0
1 24763012 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.902;LDAF=0.0216;AVGPOST=0.9959;RSQ=0.9267;ERATE=0.0004;THETA=0.0002;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 24763062 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.993;LDAF=0.4131;AVGPOST=0.9908;RSQ=0.9858;ERATE=0.0012;THETA=0.0003;AC=898;AN=2184 GT:DS:GL:BD 0.41117215 0
1 24763130 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8612;ERATE=0.0006;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24763135 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.976;LDAF=0.2069;AVGPOST=0.9932;RSQ=0.9854;ERATE=0.0006;THETA=0.0018;AC=448;AN=2184 GT:DS:GL:BD 0.20512821 0
1 24763143 rs111918385 T TAA 21275 PASS INDEL;BAVGPOST=0.994;BRSQ=0.983;LDAF=0.1198;AVGPOST=0.9984;RSQ=0.9949;ERATE=0.0004;THETA=0.0003;AC=262;AN=2184 GT:DS:GL:BD 0.11996337 0
1 24763169 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.7387;AVGPOST=0.9855;RSQ=0.9707;ERATE=0.0033;THETA=0.0005;AC=1618;AN=2184 GT:DS:GL:BD 0.74084246 1
1 24763255 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0039;AVGPOST=0.9987;RSQ=0.8453;ERATE=0.0005;THETA=0.0028;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24763281 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.974;LDAF=0.4114;AVGPOST=0.9923;RSQ=0.9881;ERATE=0.0006;THETA=0.0005;AC=899;AN=2184 GT:DS:GL:BD 0.41163003 0
1 24763285 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.972;LDAF=0.4126;AVGPOST=0.9822;RSQ=0.9738;ERATE=0.0025;THETA=0.0003;AC=905;AN=2184 GT:DS:GL:BD 0.41437730 0
1 24763331 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.4121;AVGPOST=0.9948;RSQ=0.9925;ERATE=0.0007;THETA=0.0003;AC=901;AN=2184 GT:DS:GL:BD 0.41254580 0
1 24763365 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.818;LDAF=0.0049;AVGPOST=0.9981;RSQ=0.8486;ERATE=0.0008;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 24763371 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6983;ERATE=0.0003;THETA=0.0078;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24763551 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0044;AVGPOST=0.9966;RSQ=0.6704;ERATE=0.0009;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24763556 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.719;LDAF=0.0045;AVGPOST=0.9941;RSQ=0.4744;ERATE=0.0010;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24763599 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.636;LDAF=0.0024;AVGPOST=0.9968;RSQ=0.4578;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24763610 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.949;LDAF=0.2734;AVGPOST=0.9871;RSQ=0.9765;ERATE=0.0007;THETA=0.0018;AC=598;AN=2184 GT:DS:GL:BD 0.27380952 0
1 24763666 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.853;LDAF=0.0098;AVGPOST=0.9947;RSQ=0.7704;ERATE=0.0009;THETA=0.0060;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 24763779 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5120;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24763794 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0037;AVGPOST=0.9987;RSQ=0.8546;ERATE=0.0005;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 24763851 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.714;LDAF=0.0062;AVGPOST=0.9973;RSQ=0.8221;ERATE=0.0004;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 24763907 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.755;LDAF=0.0018;AVGPOST=0.9974;RSQ=0.4246;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24763937 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7966;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24764292 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0041;AVGPOST=0.9996;RSQ=0.9626;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 24764420 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24764434 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5931;ERATE=0.0003;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24764449 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6651;ERATE=0.0004;THETA=0.0047;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24764457 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24764689 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3345;AVGPOST=0.9988;RSQ=0.9977;ERATE=0.0004;THETA=0.0002;AC=731;AN=2184 GT:DS:GL:BD 0.33470696 0
1 24764700 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6343;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24764701 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0038;AVGPOST=0.9995;RSQ=0.9442;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 24764719 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0122;AVGPOST=0.9975;RSQ=0.9202;ERATE=0.0004;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 24764744 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.907;LDAF=0.0132;AVGPOST=0.9953;RSQ=0.8610;ERATE=0.0005;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 24764753 . AG A 18447 PASS INDEL;BAVGPOST=0.969;BRSQ=0.940;LDAF=0.6274;AVGPOST=0.8965;RSQ=0.8306;ERATE=0.0259;THETA=0.0003;AC=1396;AN=2184 GT:DS:GL:BD 0.63919413 1
1 24764754 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3348;AVGPOST=0.9985;RSQ=0.9971;ERATE=0.0004;THETA=0.0003;AC=731;AN=2184 GT:DS:GL:BD 0.33470696 0
1 24764840 . G GT 2987 PASS INDEL;BAVGPOST=0.998;BRSQ=0.980;LDAF=0.0247;AVGPOST=0.9991;RSQ=0.9868;ERATE=0.0003;THETA=0.0002;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 24764875 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7071;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24764901 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.721;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5650;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24764915 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3107;AVGPOST=0.9978;RSQ=0.9964;ERATE=0.0004;THETA=0.0004;AC=679;AN=2184 GT:DS:GL:BD 0.31089744 0
1 24764963 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0058;AVGPOST=0.9969;RSQ=0.7919;ERATE=0.0020;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 24764965 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0046;AVGPOST=0.9980;RSQ=0.8150;ERATE=0.0006;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 24765023 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0029;AVGPOST=0.9973;RSQ=0.6639;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24765044 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24765082 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9289;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24765113 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0831;AVGPOST=0.9980;RSQ=0.9901;ERATE=0.0003;THETA=0.0005;AC=180;AN=2184 GT:DS:GL:BD 0.08241758 0
1 24765212 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24765378 rs35844987 TA T 48841 PASS INDEL;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.5421;AVGPOST=0.9960;RSQ=0.9942;ERATE=0.0004;THETA=0.0005;AC=1183;AN=2184 GT:DS:GL:BD 0.54166669 1
1 24765381 . AT A 6325 PASS INDEL;BAVGPOST=0.892;BRSQ=0.826;LDAF=0.4509;AVGPOST=0.8660;RSQ=0.8169;ERATE=0.0261;THETA=0.0003;AC=1031;AN=2184 GT:DS:GL:BD 0.47206959 0
1 24765450 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.671;LDAF=0.0017;AVGPOST=0.9981;RSQ=0.5788;ERATE=0.0007;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24765522 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3120;AVGPOST=0.9965;RSQ=0.9942;ERATE=0.0004;THETA=0.0004;AC=681;AN=2184 GT:DS:GL:BD 0.31181318 0
1 24765537 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.993;LDAF=0.5401;AVGPOST=0.9960;RSQ=0.9941;ERATE=0.0005;THETA=0.0006;AC=1180;AN=2184 GT:DS:GL:BD 0.54029304 1
1 24765568 . GATT G 464 PASS INDEL;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0056;AVGPOST=0.9980;RSQ=0.8607;ERATE=0.0004;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 24765707 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0115;AVGPOST=0.9965;RSQ=0.9106;ERATE=0.0004;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 24765739 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0106;AVGPOST=0.9988;RSQ=0.9469;ERATE=0.0003;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 24765880 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24765886 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.730;LDAF=0.0040;AVGPOST=0.9965;RSQ=0.6363;ERATE=0.0006;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24765997 . G GT 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.4133;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24766020 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.462;LDAF=0.0032;AVGPOST=0.9980;RSQ=0.7257;ERATE=0.0006;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24766114 . AAT A 2378 PASS INDEL;BAVGPOST=0.998;BRSQ=0.961;LDAF=0.0241;AVGPOST=0.9979;RSQ=0.9706;ERATE=0.0004;THETA=0.0002;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 24766183 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9304;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24766231 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24766353 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0032;AVGPOST=0.9997;RSQ=0.9605;ERATE=0.0004;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24766499 . C CT 346 PASS INDEL;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0030;AVGPOST=0.9990;RSQ=0.8798;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24766542 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24766606 . TG T 130 PASS INDEL;BAVGPOST=0.999;BRSQ=0.788;LDAF=0.0027;AVGPOST=0.9976;RSQ=0.6705;ERATE=0.0005;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24766615 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24766677 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24766786 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0270;AVGPOST=1.0000;RSQ=0.9993;ERATE=0.0003;THETA=0.0005;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 24766837 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9271;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24766920 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24766921 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24767164 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7902;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24767167 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.687;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5980;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24767205 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0877;AVGPOST=0.9982;RSQ=0.9925;ERATE=0.0003;THETA=0.0003;AC=192;AN=2184 GT:DS:GL:BD 0.08791209 0
1 24767248 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0115;AVGPOST=0.9997;RSQ=0.9893;ERATE=0.0004;THETA=0.0007;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 24767318 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9602;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24767374 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.867;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24767426 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3162;AVGPOST=0.9991;RSQ=0.9982;ERATE=0.0004;THETA=0.0003;AC=691;AN=2184 GT:DS:GL:BD 0.31639194 0
1 24767448 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24767618 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0826;AVGPOST=0.9979;RSQ=0.9896;ERATE=0.0003;THETA=0.0008;AC=180;AN=2184 GT:DS:GL:BD 0.08241758 0
1 24767745 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2254;AVGPOST=0.9991;RSQ=0.9979;ERATE=0.0004;THETA=0.0008;AC=491;AN=2184 GT:DS:GL:BD 0.22481684 0
1 24767774 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0074;AVGPOST=0.9996;RSQ=0.9787;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 24767877 . CATG C 264 PASS INDEL;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5129;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24767962 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9545;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24767963 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0258;AVGPOST=0.9996;RSQ=0.9927;ERATE=0.0003;THETA=0.0003;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 24767994 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.728;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8620;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24768100 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0269;AVGPOST=0.9996;RSQ=0.9941;ERATE=0.0003;THETA=0.0022;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 24768102 rs71761049 AAC A 1917 PASS INDEL;BAVGPOST=0.992;BRSQ=0.734;LDAF=0.0189;AVGPOST=0.9913;RSQ=0.8140;ERATE=0.0008;THETA=0.0002;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 24768160 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0274;AVGPOST=0.9995;RSQ=0.9922;ERATE=0.0003;THETA=0.0019;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 24768432 . CT C 1528 PASS INDEL;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0105;AVGPOST=0.9988;RSQ=0.9500;ERATE=0.0003;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 24768469 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1142;AVGPOST=1.0000;RSQ=0.9998;ERATE=0.0003;THETA=0.0002;AC=250;AN=2184 GT:DS:GL:BD 0.11446887 0
1 24768557 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24768560 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24768616 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 24768689 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0500;ERATE=0.0003;THETA=0.0007;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 24768700 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0001;AVGPOST=0.9997;RSQ=0.2165;ERATE=0.0003;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 24768778 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7418;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1620;AN=2184 GT:DS:GL:BD 0.74175823 1
1 24768824 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24768857 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24768967 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0288;AVGPOST=0.9998;RSQ=0.9964;ERATE=0.0003;THETA=0.0004;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 24769184 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0098;AVGPOST=0.9996;RSQ=0.9831;ERATE=0.0004;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 24769233 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0079;AVGPOST=0.9988;RSQ=0.9277;ERATE=0.0004;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 24769305 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.863;LDAF=0.0048;AVGPOST=0.9990;RSQ=0.9029;ERATE=0.0004;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 24769334 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7427;AVGPOST=0.9978;RSQ=0.9949;ERATE=0.0006;THETA=0.0046;AC=1623;AN=2184 GT:DS:GL:BD 0.74313188 1
1 24769416 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0827;AVGPOST=0.9993;RSQ=0.9959;ERATE=0.0003;THETA=0.0036;AC=181;AN=2184 GT:DS:GL:BD 0.08287546 0
1 24769420 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6250;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24769560 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.642;LDAF=0.0024;AVGPOST=0.9978;RSQ=0.6809;ERATE=0.0003;THETA=0.0019;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24769727 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0022;AVGPOST=0.9988;RSQ=0.7965;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24769759 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0881;AVGPOST=0.9986;RSQ=0.9942;ERATE=0.0003;THETA=0.0080;AC=192;AN=2184 GT:DS:GL:BD 0.08791209 0
1 24769929 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0096;AVGPOST=0.9998;RSQ=0.9923;ERATE=0.0003;THETA=0.0088;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 24770021 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0103;AVGPOST=0.9995;RSQ=0.9813;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 24770139 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1899;AVGPOST=0.9977;RSQ=0.9942;ERATE=0.0004;THETA=0.0006;AC=412;AN=2184 GT:DS:GL:BD 0.18864469 0
1 24770248 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24770457 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6298;AVGPOST=0.9978;RSQ=0.9963;ERATE=0.0005;THETA=0.0002;AC=1374;AN=2184 GT:DS:GL:BD 0.62912089 1
1 24770553 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9747;ERATE=0.0003;THETA=0.0019;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 24770594 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6308;AVGPOST=0.9966;RSQ=0.9944;ERATE=0.0005;THETA=0.0005;AC=1376;AN=2184 GT:DS:GL:BD 0.63003665 1
1 24770675 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7452;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24770742 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9497;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24770831 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8586;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24770840 . AG A 54 PASS INDEL;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0022;AVGPOST=0.9987;RSQ=0.7763;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24770860 . GA G 1767 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0115;AVGPOST=0.9999;RSQ=0.9964;ERATE=0.0003;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 24770899 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0116;AVGPOST=0.9997;RSQ=0.9893;ERATE=0.0003;THETA=0.0008;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 24771041 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.8168;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24771104 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7522;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24771193 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0079;AVGPOST=0.9997;RSQ=0.9806;ERATE=0.0004;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 24771220 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7102;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24771404 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24771434 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24771441 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0088;AVGPOST=0.9999;RSQ=0.9934;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 24771606 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9756;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24771637 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8407;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24771721 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24771777 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24771792 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9682;ERATE=0.0010;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24771919 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24771930 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0116;AVGPOST=0.9995;RSQ=0.9825;ERATE=0.0005;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 24771983 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7817;ERATE=0.0010;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24772209 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9654;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 24772334 . AT A 45 PASS INDEL;BAVGPOST=1.000;BRSQ=0.713;LDAF=0.0027;AVGPOST=0.9963;RSQ=0.4512;ERATE=0.0005;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24772364 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8688;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24772465 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.986;LDAF=0.7434;AVGPOST=0.9907;RSQ=0.9819;ERATE=0.0010;THETA=0.0004;AC=1627;AN=2184 GT:DS:GL:BD 0.74496335 1
1 24772686 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0038;AVGPOST=0.9989;RSQ=0.8745;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24772694 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.820;LDAF=0.0074;AVGPOST=0.9984;RSQ=0.9315;ERATE=0.0004;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 24772723 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.7133;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24772761 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6140;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24772782 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8177;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24772863 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0029;AVGPOST=0.9987;RSQ=0.8265;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24773009 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.982;LDAF=0.0902;AVGPOST=0.9986;RSQ=0.9937;ERATE=0.0003;THETA=0.0004;AC=197;AN=2184 GT:DS:GL:BD 0.09020147 0
1 24773033 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.971;LDAF=0.0872;AVGPOST=0.9989;RSQ=0.9949;ERATE=0.0004;THETA=0.0005;AC=191;AN=2184 GT:DS:GL:BD 0.08745421 0
1 24773036 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0948;AVGPOST=0.9978;RSQ=0.9889;ERATE=0.0005;THETA=0.0003;AC=207;AN=2184 GT:DS:GL:BD 0.09478022 0
1 24773062 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.889;LDAF=0.9733;AVGPOST=0.9942;RSQ=0.9094;ERATE=0.0006;THETA=0.0003;AC=2130;AN=2184 GT:DS:GL:BD 0.97527474 1
1 24773091 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.3205;AVGPOST=0.9983;RSQ=0.9972;ERATE=0.0003;THETA=0.0005;AC=701;AN=2184 GT:DS:GL:BD 0.32097068 0
1 24773103 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9480;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 24773128 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.0872;AVGPOST=0.9990;RSQ=0.9952;ERATE=0.0004;THETA=0.0004;AC=191;AN=2184 GT:DS:GL:BD 0.08745421 0
1 24773184 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6753;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24773370 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0035;AVGPOST=0.9990;RSQ=0.8908;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24773605 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0098;AVGPOST=0.9991;RSQ=0.9612;ERATE=0.0003;THETA=0.0017;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 24773634 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0685;AVGPOST=0.9997;RSQ=0.9981;ERATE=0.0003;THETA=0.0003;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 24773664 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24773712 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.953;LDAF=0.0332;AVGPOST=0.9969;RSQ=0.9595;ERATE=0.0003;THETA=0.0007;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 24773776 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0876;AVGPOST=0.9992;RSQ=0.9960;ERATE=0.0004;THETA=0.0004;AC=192;AN=2184 GT:DS:GL:BD 0.08791209 0
1 24773803 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.7463;AVGPOST=0.9975;RSQ=0.9952;ERATE=0.0004;THETA=0.0004;AC=1630;AN=2184 GT:DS:GL:BD 0.74633700 1
1 24774082 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0025;AVGPOST=0.9993;RSQ=0.8639;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24774090 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5069;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24774213 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7687;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24774233 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.7270;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24774288 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0096;AVGPOST=0.9991;RSQ=0.9680;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 24774468 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.752;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6738;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24774476 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9990;RSQ=0.8990;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24774538 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24774610 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6359;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24774658 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24774774 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.6281;AVGPOST=0.9978;RSQ=0.9960;ERATE=0.0004;THETA=0.0007;AC=1372;AN=2184 GT:DS:GL:BD 0.62820512 1
1 24774860 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5039;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24774909 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0014;AVGPOST=0.9992;RSQ=0.7460;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24774914 . ATAGTAAT A 707 PASS INDEL;BAVGPOST=0.998;BRSQ=0.769;LDAF=0.0085;AVGPOST=0.9957;RSQ=0.8312;ERATE=0.0005;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 24775000 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3069;AVGPOST=0.9984;RSQ=0.9970;ERATE=0.0004;THETA=0.0003;AC=669;AN=2184 GT:DS:GL:BD 0.30631867 0
1 24775094 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.933;LDAF=0.0186;AVGPOST=0.9974;RSQ=0.9419;ERATE=0.0004;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 24775376 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5905;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24775492 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9349;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24775569 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24775571 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0026;AVGPOST=0.9992;RSQ=0.8816;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24775722 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0025;AVGPOST=0.9985;RSQ=0.8009;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24775882 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=1.0000;RSQ=0.9957;ERATE=0.0003;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 24775911 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24775927 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24775947 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0012;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24775967 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1915;AVGPOST=1.0000;RSQ=0.9999;ERATE=0.0003;THETA=0.0003;AC=417;AN=2184 GT:DS:GL:BD 0.19093406 0
1 24775974 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24776001 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24776012 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9756;ERATE=0.0007;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24776185 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24776245 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24776259 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8746;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24776407 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.6086;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24776424 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24776531 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24776577 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.787;LDAF=0.0089;AVGPOST=0.9968;RSQ=0.8504;ERATE=0.0004;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 24776585 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0263;AVGPOST=0.9984;RSQ=0.9762;ERATE=0.0004;THETA=0.0002;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 24776598 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0057;AVGPOST=0.9986;RSQ=0.9138;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 24776604 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24776632 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5222;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24776727 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0199;AVGPOST=0.9995;RSQ=0.9883;ERATE=0.0003;THETA=0.0002;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 24776797 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0677;AVGPOST=0.9996;RSQ=0.9976;ERATE=0.0003;THETA=0.0003;AC=148;AN=2184 GT:DS:GL:BD 0.06776557 0
1 24776942 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.855;LDAF=0.0120;AVGPOST=0.9956;RSQ=0.8602;ERATE=0.0003;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 24776953 . A AG 218 PASS INDEL;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0040;AVGPOST=0.9981;RSQ=0.7886;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24776955 . T TG 259 PASS INDEL;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.8079;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24776959 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6009;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24776971 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1915;AVGPOST=0.9985;RSQ=0.9967;ERATE=0.0003;THETA=0.0002;AC=417;AN=2184 GT:DS:GL:BD 0.19093406 0
1 24777099 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0272;AVGPOST=0.9982;RSQ=0.9731;ERATE=0.0003;THETA=0.0003;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 24777213 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6424;ERATE=0.0006;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24777421 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.5840;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24777516 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0111;AVGPOST=0.9992;RSQ=0.9675;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 24777532 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5407;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24777573 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0203;AVGPOST=0.9994;RSQ=0.9861;ERATE=0.0006;THETA=0.0008;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 24777624 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.8211;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24777645 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0872;AVGPOST=0.9991;RSQ=0.9966;ERATE=0.0003;THETA=0.0004;AC=190;AN=2184 GT:DS:GL:BD 0.08699634 0
1 24777751 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24777841 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4908;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24777846 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.871;LDAF=0.0002;AVGPOST=0.9996;RSQ=0.2372;ERATE=0.0003;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 24778207 . G GA 31 PASS INDEL;BAVGPOST=0.989;BRSQ=0.578;LDAF=0.0178;AVGPOST=0.9799;RSQ=0.5606;ERATE=0.0043;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 24778289 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.9856;AVGPOST=0.9964;RSQ=0.9035;ERATE=0.0003;THETA=0.0006;AC=2155;AN=2184 GT:DS:GL:BD 0.98672163 1
1 24778407 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24778460 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24778460 . CG C 952 PASS INDEL;BAVGPOST=0.998;BRSQ=0.890;LDAF=0.0083;AVGPOST=0.9968;RSQ=0.8661;ERATE=0.0004;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 24778498 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0036;AVGPOST=0.9995;RSQ=0.9471;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 24778538 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6231;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24778635 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24778643 . A AG 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0030;AVGPOST=0.9989;RSQ=0.8253;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24778703 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5052;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24778745 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7587;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24778757 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7340;ERATE=0.0010;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24778811 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3196;AVGPOST=0.9982;RSQ=0.9967;ERATE=0.0005;THETA=0.0003;AC=699;AN=2184 GT:DS:GL:BD 0.32005495 0
1 24778825 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1943;AVGPOST=0.9990;RSQ=0.9978;ERATE=0.0003;THETA=0.0019;AC=424;AN=2184 GT:DS:GL:BD 0.19413920 0
1 24778859 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24778869 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24778948 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0950;AVGPOST=0.9996;RSQ=0.9983;ERATE=0.0003;THETA=0.0003;AC=208;AN=2184 GT:DS:GL:BD 0.09523810 0
1 24778973 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.683;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8510;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24779071 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.615;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8088;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24779165 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0117;AVGPOST=0.9995;RSQ=0.9808;ERATE=0.0004;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 24779190 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6966;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24779268 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.785;LDAF=0.0024;AVGPOST=0.9984;RSQ=0.7073;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24779333 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.780;LDAF=0.0178;AVGPOST=0.9896;RSQ=0.7633;ERATE=0.0009;THETA=0.0002;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 24779382 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.961;LDAF=0.3088;AVGPOST=0.9930;RSQ=0.9874;ERATE=0.0010;THETA=0.0002;AC=675;AN=2184 GT:DS:GL:BD 0.30906594 0
1 24779384 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.987;LDAF=0.4120;AVGPOST=0.9894;RSQ=0.9847;ERATE=0.0010;THETA=0.0005;AC=900;AN=2184 GT:DS:GL:BD 0.41208792 0
1 24779459 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.907;LDAF=0.0175;AVGPOST=0.9966;RSQ=0.9284;ERATE=0.0005;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 24779679 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3196;AVGPOST=0.9990;RSQ=0.9982;ERATE=0.0007;THETA=0.0026;AC=698;AN=2184 GT:DS:GL:BD 0.31959707 0
1 24779765 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.720;LDAF=0.0081;AVGPOST=0.9931;RSQ=0.6753;ERATE=0.0067;THETA=0.0014;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 24779855 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3256;AVGPOST=0.9995;RSQ=0.9992;ERATE=0.0035;THETA=0.0003;AC=711;AN=2184 GT:DS:GL:BD 0.32554945 0
1 24779873 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3149;AVGPOST=1.0000;RSQ=0.9999;ERATE=0.0003;THETA=0.0016;AC=687;AN=2184 GT:DS:GL:BD 0.31456044 0
1 24779874 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 24779953 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24780076 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0040;AVGPOST=0.9996;RSQ=0.9651;ERATE=0.0005;THETA=0.0011;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 24780080 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0066;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24780236 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8476;ERATE=0.0003;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24780237 . A AG 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6467;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24780356 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1819;AVGPOST=0.9987;RSQ=0.9969;ERATE=0.0003;THETA=0.0020;AC=397;AN=2184 GT:DS:GL:BD 0.18177655 0
1 24780743 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0247;AVGPOST=0.9991;RSQ=0.9864;ERATE=0.0004;THETA=0.0005;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 24780870 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0316;AVGPOST=0.9981;RSQ=0.9795;ERATE=0.0003;THETA=0.0003;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 24780927 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.0361;AVGPOST=0.9990;RSQ=0.9906;ERATE=0.0003;THETA=0.0004;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 24781014 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5522;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24781055 . GAT G 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24781092 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24781164 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2648;AVGPOST=0.9978;RSQ=0.9958;ERATE=0.0006;THETA=0.0019;AC=578;AN=2184 GT:DS:GL:BD 0.26465201 0
1 24781247 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5905;AVGPOST=0.9982;RSQ=0.9972;ERATE=0.0005;THETA=0.0013;AC=1289;AN=2184 GT:DS:GL:BD 0.59020144 1
1 24781423 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6591;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24781618 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.778;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8510;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24781648 . GC G 429 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0035;AVGPOST=0.9977;RSQ=0.7416;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24781653 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9870;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 24781809 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0115;AVGPOST=0.9997;RSQ=0.9895;ERATE=0.0003;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 24781854 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1381;AVGPOST=0.9992;RSQ=0.9976;ERATE=0.0003;THETA=0.0003;AC=303;AN=2184 GT:DS:GL:BD 0.13873626 0
1 24781875 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0028;AVGPOST=0.9979;RSQ=0.7397;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24782047 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6545;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24782097 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0042;AVGPOST=0.9989;RSQ=0.8986;ERATE=0.0005;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 24782165 . TACA T 234 PASS INDEL;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8579;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24782169 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8330;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24782212 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0039;AVGPOST=0.9981;RSQ=0.8424;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 24782286 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0128;AVGPOST=1.0000;RSQ=0.9984;ERATE=0.0003;THETA=0.0011;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 24782290 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9773;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 24782291 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24782361 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8090;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24782475 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.950;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8338;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24782526 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24782572 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24782607 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24782623 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24782656 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9385;ERATE=0.0010;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24782710 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0119;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 24782746 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9285;ERATE=0.0009;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24782752 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24782763 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24782768 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24782855 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24782930 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0205;AVGPOST=1.0000;RSQ=0.9990;ERATE=0.0003;THETA=0.0001;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 24782983 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 24783190 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6952;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24783191 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0206;AVGPOST=0.9999;RSQ=0.9980;ERATE=0.0003;THETA=0.0002;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 24783311 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.7229;AVGPOST=0.9967;RSQ=0.9932;ERATE=0.0004;THETA=0.0007;AC=1581;AN=2184 GT:DS:GL:BD 0.72390109 1
1 24783392 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.953;BRSQ=0.913;LDAF=0.2017;AVGPOST=0.9895;RSQ=0.9734;ERATE=0.0005;THETA=0.0006;AC=448;AN=2184 GT:DS:GL:BD 0.20512821 0
1 24783400 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.934;BRSQ=0.908;LDAF=0.5698;AVGPOST=0.9708;RSQ=0.9555;ERATE=0.0012;THETA=0.0003;AC=1259;AN=2184 GT:DS:GL:BD 0.57646519 1
1 24783437 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8064;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24783713 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6604;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24783836 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9090;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24783918 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5682;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24784008 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7279;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24784026 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0079;AVGPOST=0.9992;RSQ=0.9533;ERATE=0.0003;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 24784035 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0190;AVGPOST=0.9988;RSQ=0.9796;ERATE=0.0003;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 24784106 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6525;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24784119 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24784139 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3715;AVGPOST=0.9996;RSQ=0.9992;ERATE=0.0003;THETA=0.0003;AC=812;AN=2184 GT:DS:GL:BD 0.37179488 0
1 24784197 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5901;AVGPOST=0.9997;RSQ=0.9994;ERATE=0.0003;THETA=0.0023;AC=1288;AN=2184 GT:DS:GL:BD 0.58974361 1
1 24784214 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0752;AVGPOST=0.9994;RSQ=0.9965;ERATE=0.0003;THETA=0.0003;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 24784275 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24784286 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0200;AVGPOST=0.9993;RSQ=0.9865;ERATE=0.0003;THETA=0.0002;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 24784309 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24784321 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7831;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24784345 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8763;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24784436 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8889;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24784744 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.754;LDAF=0.0034;AVGPOST=0.9979;RSQ=0.7661;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24784766 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9734;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24784858 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0061;AVGPOST=0.9973;RSQ=0.8497;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 24784937 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3191;AVGPOST=0.9995;RSQ=0.9989;ERATE=0.0004;THETA=0.0005;AC=697;AN=2184 GT:DS:GL:BD 0.31913918 0
1 24785062 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0210;AVGPOST=0.9990;RSQ=0.9841;ERATE=0.0003;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 24785067 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2165;AVGPOST=0.9993;RSQ=0.9982;ERATE=0.0003;THETA=0.0004;AC=472;AN=2184 GT:DS:GL:BD 0.21611722 0
1 24785069 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.1944;AVGPOST=0.9945;RSQ=0.9864;ERATE=0.0004;THETA=0.0005;AC=424;AN=2184 GT:DS:GL:BD 0.19413920 0
1 24785180 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0205;AVGPOST=1.0000;RSQ=0.9990;ERATE=0.0003;THETA=0.0004;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 24785227 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7163;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24785231 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24785336 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24785393 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3190;AVGPOST=1.0000;RSQ=0.9999;ERATE=0.0003;THETA=0.0003;AC=697;AN=2184 GT:DS:GL:BD 0.31913918 0
1 24785406 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8890;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24785461 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0009;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 24785484 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0061;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24785620 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24785826 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0206;AVGPOST=0.9999;RSQ=0.9970;ERATE=0.0003;THETA=0.0015;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 24785946 . A AT 730 PASS INDEL;BAVGPOST=0.992;BRSQ=0.747;LDAF=0.0165;AVGPOST=0.9878;RSQ=0.7229;ERATE=0.0027;THETA=0.0007;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 24786358 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0275;AVGPOST=0.9996;RSQ=0.9945;ERATE=0.0003;THETA=0.0006;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 24786434 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1239;AVGPOST=0.9987;RSQ=0.9952;ERATE=0.0003;THETA=0.0005;AC=270;AN=2184 GT:DS:GL:BD 0.12362637 0
1 24786450 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.8243;ERATE=0.0005;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24786463 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0308;AVGPOST=0.9993;RSQ=0.9902;ERATE=0.0003;THETA=0.0034;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 24786568 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.6973;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24786598 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0003;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24786617 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7745;ERATE=0.0003;THETA=0.0052;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24786763 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0205;AVGPOST=0.9995;RSQ=0.9908;ERATE=0.0003;THETA=0.0081;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 24786806 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7819;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24786861 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24786870 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24786906 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24786944 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9756;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24787293 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0019;AVGPOST=0.9993;RSQ=0.8543;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24787369 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.8401;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24787614 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24787773 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.916;LDAF=0.0156;AVGPOST=0.9954;RSQ=0.8937;ERATE=0.0007;THETA=0.0007;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 24787879 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.787;LDAF=0.0058;AVGPOST=0.9967;RSQ=0.7935;ERATE=0.0004;THETA=0.0042;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 24787947 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.899;BRSQ=0.831;LDAF=0.5946;AVGPOST=0.8604;RSQ=0.7681;ERATE=0.0397;THETA=0.0004;AC=1348;AN=2184 GT:DS:GL:BD 0.61721611 1
1 24787979 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.964;LDAF=0.3041;AVGPOST=0.9875;RSQ=0.9772;ERATE=0.0006;THETA=0.0005;AC=670;AN=2184 GT:DS:GL:BD 0.30677655 0
1 24788128 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.927;BRSQ=0.876;LDAF=0.4677;AVGPOST=0.8747;RSQ=0.8121;ERATE=0.0263;THETA=0.0005;AC=1040;AN=2184 GT:DS:GL:BD 0.47619048 0
1 24788289 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.775;LDAF=0.0008;AVGPOST=0.9989;RSQ=0.4260;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24788339 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6171;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24788555 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0070;AVGPOST=0.9995;RSQ=0.9681;ERATE=0.0003;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 24788606 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6351;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24788618 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24788692 . TG T 165 PASS INDEL;BAVGPOST=0.999;BRSQ=0.769;LDAF=0.0020;AVGPOST=0.9984;RSQ=0.6755;ERATE=0.0004;THETA=0.0018;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24788757 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6793;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24788949 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5533;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24788950 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.970;LDAF=0.0617;AVGPOST=0.9970;RSQ=0.9793;ERATE=0.0003;THETA=0.0003;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 24788959 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0052;AVGPOST=0.9997;RSQ=0.9708;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 24789048 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0054;AVGPOST=0.9984;RSQ=0.9066;ERATE=0.0003;THETA=0.0012;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 24789055 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.850;LDAF=0.0096;AVGPOST=0.9967;RSQ=0.8872;ERATE=0.0005;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 24789182 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0114;AVGPOST=0.9988;RSQ=0.9538;ERATE=0.0004;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 24789263 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24789359 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.879;LDAF=0.0231;AVGPOST=0.9931;RSQ=0.8887;ERATE=0.0007;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 24789385 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.985;LDAF=0.2853;AVGPOST=0.9915;RSQ=0.9831;ERATE=0.0008;THETA=0.0009;AC=623;AN=2184 GT:DS:GL:BD 0.28525642 0
1 24789424 . ATC A 331 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8836;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24789473 . TAAAATACAAAATACTA T 2886 PASS INDEL;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0137;AVGPOST=0.9989;RSQ=0.9685;ERATE=0.0003;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 24789550 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0029;AVGPOST=0.9979;RSQ=0.6679;ERATE=0.0005;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24789614 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.953;LDAF=0.0407;AVGPOST=0.9927;RSQ=0.9242;ERATE=0.0005;THETA=0.0021;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 24789626 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.412;LDAF=0.0112;AVGPOST=0.9947;RSQ=0.8184;ERATE=0.0008;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 24789644 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.812;LDAF=0.0036;AVGPOST=0.9983;RSQ=0.8244;ERATE=0.0004;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 24789722 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7425;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24789754 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7740;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24789853 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9420;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24789870 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5782;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24789962 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0354;AVGPOST=0.9994;RSQ=0.9930;ERATE=0.0003;THETA=0.0007;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 24790009 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0353;AVGPOST=0.9995;RSQ=0.9947;ERATE=0.0003;THETA=0.0008;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 24790032 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0031;AVGPOST=0.9979;RSQ=0.7374;ERATE=0.0005;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24790066 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7950;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24790141 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0061;AVGPOST=0.9995;RSQ=0.9597;ERATE=0.0003;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 24790171 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0106;AVGPOST=0.9998;RSQ=0.9923;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 24790252 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9196;ERATE=0.0004;THETA=0.0017;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24790407 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24790421 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8499;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24790436 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0133;AVGPOST=1.0000;RSQ=0.9984;ERATE=0.0003;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 24790444 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24790464 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0110;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0010;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 24790511 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0017;AVGPOST=0.9996;RSQ=0.9004;ERATE=0.0004;THETA=0.0028;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24790657 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9756;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24790698 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.9085;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24790950 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0119;AVGPOST=0.9997;RSQ=0.9889;ERATE=0.0003;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 24791000 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6343;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24791167 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8702;ERATE=0.0004;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24791262 . A AC 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5663;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24791528 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6947;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24791645 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24791671 . TTC T 56 PASS INDEL;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24791686 rs2307612 A AGTGCATGAGCTTTG 65190 PASS INDEL;BAVGPOST=0.969;BRSQ=0.934;LDAF=0.2905;AVGPOST=0.9771;RSQ=0.9586;ERATE=0.0020;THETA=0.0004;AC=634;AN=2184 GT:DS:GL:BD 0.29029304 0
1 24791832 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0026;AVGPOST=0.9984;RSQ=0.7884;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24791907 . T TTG 4128 PASS INDEL;BAVGPOST=0.892;BRSQ=0.720;LDAF=0.2508;AVGPOST=0.8580;RSQ=0.6993;ERATE=0.0637;THETA=0.0009;AC=479;AN=2184 GT:DS:GL:BD 0.21932234 0
1 24791931 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0125;AVGPOST=0.9986;RSQ=0.9557;ERATE=0.0004;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 24791932 . TAG T 13 PASS INDEL;BAVGPOST=0.970;BRSQ=0.195;LDAF=0.1153;AVGPOST=0.8331;RSQ=0.3664;ERATE=0.0075;THETA=0.0007;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 24791969 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24792011 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7635;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24792016 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6293;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24792107 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0131;AVGPOST=0.9981;RSQ=0.9390;ERATE=0.0005;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 24792149 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24792202 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5966;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24792265 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0120;AVGPOST=0.9999;RSQ=0.9948;ERATE=0.0003;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 24792324 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0177;AVGPOST=0.9997;RSQ=0.9932;ERATE=0.0003;THETA=0.0008;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 24792404 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24792417 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0110;AVGPOST=0.9999;RSQ=0.9942;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 24792617 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.6624;AVGPOST=0.9984;RSQ=0.9972;ERATE=0.0003;THETA=0.0003;AC=1446;AN=2184 GT:DS:GL:BD 0.66208792 1
1 24792641 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24792731 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6057;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24792928 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0379;AVGPOST=0.9979;RSQ=0.9769;ERATE=0.0003;THETA=0.0007;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 24793016 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.7324;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24793119 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0106;AVGPOST=0.9998;RSQ=0.9925;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 24793156 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9776;ERATE=0.0003;THETA=0.0012;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 24793284 . CTGAG C 82 PASS INDEL;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8425;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24793287 . AGAACGG A 141 PASS INDEL;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8224;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24793297 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0111;AVGPOST=0.9997;RSQ=0.9862;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 24793307 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5558;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24793308 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24793328 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0356;AVGPOST=0.9992;RSQ=0.9926;ERATE=0.0003;THETA=0.0005;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 24793346 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6854;AVGPOST=0.9981;RSQ=0.9967;ERATE=0.0003;THETA=0.0003;AC=1497;AN=2184 GT:DS:GL:BD 0.68543959 1
1 24793423 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0436;AVGPOST=0.9995;RSQ=0.9965;ERATE=0.0003;THETA=0.0004;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 24793439 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.712;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5281;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24793468 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0440;AVGPOST=0.9985;RSQ=0.9880;ERATE=0.0003;THETA=0.0003;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 24793480 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.6622;AVGPOST=0.9971;RSQ=0.9950;ERATE=0.0004;THETA=0.0006;AC=1447;AN=2184 GT:DS:GL:BD 0.66254580 1
1 24793524 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9555;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24793672 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5941;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24793703 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0027;AVGPOST=0.9977;RSQ=0.6141;ERATE=0.0007;THETA=0.0058;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24793797 rs11367687 CA C 8190 PASS INDEL;BAVGPOST=0.821;BRSQ=0.689;LDAF=0.5011;AVGPOST=0.7730;RSQ=0.6528;ERATE=0.0475;THETA=0.0007;AC=1135;AN=2184 GT:DS:GL:BD 0.51968867 1
1 24793837 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.841;LDAF=0.0217;AVGPOST=0.9898;RSQ=0.8041;ERATE=0.0011;THETA=0.0005;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 24793931 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9792;ERATE=0.0003;THETA=0.0028;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 24793961 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.612;LDAF=0.0093;AVGPOST=0.9936;RSQ=0.7345;ERATE=0.0014;THETA=0.0008;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 24793971 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.985;LDAF=0.2008;AVGPOST=0.9935;RSQ=0.9837;ERATE=0.0007;THETA=0.0006;AC=437;AN=2184 GT:DS:GL:BD 0.20009157 0
1 24793971 . AAAAT A 70 PASS INDEL;BAVGPOST=0.998;BRSQ=0.725;LDAF=0.0046;AVGPOST=0.9961;RSQ=0.6422;ERATE=0.0010;THETA=0.0034;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24794010 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0184;AVGPOST=0.9997;RSQ=0.9935;ERATE=0.0003;THETA=0.0005;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 24794181 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7533;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24794499 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7033;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24794635 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5157;ERATE=0.0003;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24794804 rs71577710 C CAATA 4829 PASS INDEL;BAVGPOST=0.984;BRSQ=0.813;LDAF=0.0501;AVGPOST=0.9694;RSQ=0.7533;ERATE=0.0040;THETA=0.0004;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 24794827 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0022;AVGPOST=0.9982;RSQ=0.6643;ERATE=0.0009;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24794842 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0180;AVGPOST=0.9981;RSQ=0.9615;ERATE=0.0003;THETA=0.0005;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 24794843 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0120;AVGPOST=0.9998;RSQ=0.9931;ERATE=0.0003;THETA=0.0010;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 24795081 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9824;ERATE=0.0003;THETA=0.0024;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 24795094 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.979;LDAF=0.0395;AVGPOST=0.9994;RSQ=0.9939;ERATE=0.0003;THETA=0.0004;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 24795192 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7797;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24795312 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24795315 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24795345 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24795472 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0026;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 24795495 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24795618 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0068;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24795630 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9947;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24795688 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24795702 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24795864 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0288;AVGPOST=0.9994;RSQ=0.9914;ERATE=0.0003;THETA=0.0004;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 24796067 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0276;AVGPOST=0.9990;RSQ=0.9881;ERATE=0.0003;THETA=0.0004;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 24796069 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0518;AVGPOST=0.9987;RSQ=0.9890;ERATE=0.0003;THETA=0.0012;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 24796083 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24796084 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.896;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9103;ERATE=0.0003;THETA=0.0025;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24796129 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0339;AVGPOST=0.9984;RSQ=0.9833;ERATE=0.0003;THETA=0.0005;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 24796302 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24796327 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9611;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24796487 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.940;LDAF=0.0092;AVGPOST=0.9985;RSQ=0.9284;ERATE=0.0004;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 24796531 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0030;AVGPOST=0.9993;RSQ=0.8855;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24796591 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24796603 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24796642 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8345;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24796686 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.889;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24796728 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0101;AVGPOST=0.9998;RSQ=0.9920;ERATE=0.0003;THETA=0.0016;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 24796740 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7640;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24796838 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.988;LDAF=0.2333;AVGPOST=0.9919;RSQ=0.9818;ERATE=0.0006;THETA=0.0004;AC=508;AN=2184 GT:DS:GL:BD 0.23260073 0
1 24796872 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0048;AVGPOST=0.9996;RSQ=0.9597;ERATE=0.0003;THETA=0.0012;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 24797012 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.791;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7092;ERATE=0.0007;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24797369 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24797383 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.949;LDAF=0.0087;AVGPOST=0.9987;RSQ=0.9363;ERATE=0.0007;THETA=0.0008;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 24797393 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24797458 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0031;AVGPOST=0.9994;RSQ=0.9016;ERATE=0.0003;THETA=0.0043;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24797575 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.898;LDAF=0.0200;AVGPOST=0.9946;RSQ=0.9053;ERATE=0.0005;THETA=0.0045;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 24797660 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0017;AVGPOST=0.9987;RSQ=0.6694;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24797737 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0285;AVGPOST=0.9995;RSQ=0.9917;ERATE=0.0004;THETA=0.0002;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 24797839 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0047;AVGPOST=0.9969;RSQ=0.7476;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 24797840 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6441;ERATE=0.0003;THETA=0.0043;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24797911 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0020;AVGPOST=0.9969;RSQ=0.3999;ERATE=0.0005;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24798001 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.984;LDAF=0.5736;AVGPOST=0.9873;RSQ=0.9811;ERATE=0.0007;THETA=0.0012;AC=1253;AN=2184 GT:DS:GL:BD 0.57371795 1
1 24798020 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.649;LDAF=0.0053;AVGPOST=0.9945;RSQ=0.6314;ERATE=0.0006;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 24798184 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0133;AVGPOST=0.9981;RSQ=0.9494;ERATE=0.0004;THETA=0.0042;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 24798210 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.834;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9091;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24798236 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0044;AVGPOST=0.9968;RSQ=0.7421;ERATE=0.0004;THETA=0.0027;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24798280 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5130;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24798382 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24798383 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.967;BRSQ=0.953;LDAF=0.4757;AVGPOST=0.9683;RSQ=0.9594;ERATE=0.0101;THETA=0.0009;AC=1034;AN=2184 GT:DS:GL:BD 0.47344321 0
1 24798396 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.8026;ERATE=0.0003;THETA=0.0024;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24798436 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0071;AVGPOST=0.9986;RSQ=0.9196;ERATE=0.0004;THETA=0.0009;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 24798659 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.905;LDAF=0.0047;AVGPOST=0.9985;RSQ=0.8656;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 24798696 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0279;AVGPOST=0.9988;RSQ=0.9848;ERATE=0.0003;THETA=0.0119;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 24798726 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.734;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8509;ERATE=0.0004;THETA=0.0058;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24798780 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7031;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24798869 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0129;AVGPOST=0.9986;RSQ=0.9596;ERATE=0.0003;THETA=0.0069;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 24799001 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7330;ERATE=0.0003;THETA=0.0144;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24799045 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0559;AVGPOST=0.9992;RSQ=0.9933;ERATE=0.0003;THETA=0.0018;AC=122;AN=2184 GT:DS:GL:BD 0.05586081 0
1 24799158 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9221;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24799180 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.730;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7577;ERATE=0.0003;THETA=0.0043;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24799231 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.854;LDAF=0.0007;AVGPOST=0.9990;RSQ=0.4493;ERATE=0.0003;THETA=0.0030;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24799377 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8091;ERATE=0.0004;THETA=0.0029;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24799394 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.7158;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24799458 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.806;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8658;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24799552 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.981;LDAF=0.6048;AVGPOST=0.9887;RSQ=0.9826;ERATE=0.0007;THETA=0.0007;AC=1322;AN=2184 GT:DS:GL:BD 0.60531133 1
1 24799792 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.1821;AVGPOST=0.9926;RSQ=0.9811;ERATE=0.0008;THETA=0.0004;AC=398;AN=2184 GT:DS:GL:BD 0.18223444 0
1 24799861 . T TG 22960 PASS INDEL;BAVGPOST=0.995;BRSQ=0.987;LDAF=0.1834;AVGPOST=0.9920;RSQ=0.9792;ERATE=0.0009;THETA=0.0011;AC=396;AN=2184 GT:DS:GL:BD 0.18131869 0
1 24799951 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.671;LDAF=0.0022;AVGPOST=0.9985;RSQ=0.7397;ERATE=0.0004;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24799977 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0022;AVGPOST=0.9972;RSQ=0.5500;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24800257 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5979;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24800382 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0247;AVGPOST=0.9989;RSQ=0.9829;ERATE=0.0003;THETA=0.0005;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 24800662 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0026;AVGPOST=0.9985;RSQ=0.7825;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24800827 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.961;LDAF=0.6842;AVGPOST=0.9557;RSQ=0.9247;ERATE=0.0116;THETA=0.0007;AC=1518;AN=2184 GT:DS:GL:BD 0.69505495 1
1 24801228 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7452;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24801319 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.970;LDAF=0.1033;AVGPOST=0.9899;RSQ=0.9603;ERATE=0.0004;THETA=0.0004;AC=224;AN=2184 GT:DS:GL:BD 0.10256410 0
1 24801350 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.519;LDAF=0.0019;AVGPOST=0.9983;RSQ=0.6071;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24801373 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0271;AVGPOST=0.9964;RSQ=0.9537;ERATE=0.0007;THETA=0.0006;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 24801536 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.678;LDAF=0.0032;AVGPOST=0.9974;RSQ=0.6536;ERATE=0.0007;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24801593 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.974;LDAF=0.0390;AVGPOST=0.9971;RSQ=0.9715;ERATE=0.0006;THETA=0.0029;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 24801619 . AAG A 388 PASS INDEL;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0035;AVGPOST=0.9981;RSQ=0.7948;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24801698 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.715;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6678;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24801830 . AAT A 22 PASS INDEL;BAVGPOST=0.999;BRSQ=0.466;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.4736;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24801964 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.691;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5184;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24802000 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0244;AVGPOST=0.9995;RSQ=0.9917;ERATE=0.0003;THETA=0.0050;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 24802138 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0027;AVGPOST=0.9997;RSQ=0.9556;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24802250 . CT C 41 PASS INDEL;BAVGPOST=0.999;BRSQ=0.758;LDAF=0.0032;AVGPOST=0.9978;RSQ=0.7125;ERATE=0.0006;THETA=0.0028;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24802283 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0049;AVGPOST=0.9994;RSQ=0.9463;ERATE=0.0003;THETA=0.0027;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 24802289 . C CA 733 PASS INDEL;BAVGPOST=0.991;BRSQ=0.900;LDAF=0.0337;AVGPOST=0.9878;RSQ=0.8693;ERATE=0.0031;THETA=0.0006;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 24802296 rs112535604 A AG 4970 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0249;AVGPOST=0.9992;RSQ=0.9871;ERATE=0.0003;THETA=0.0006;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 24802342 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0249;AVGPOST=0.9992;RSQ=0.9870;ERATE=0.0003;THETA=0.0008;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 24802417 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24802437 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9293;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24802566 . T TC 625 PASS INDEL;BAVGPOST=0.994;BRSQ=0.925;LDAF=0.0409;AVGPOST=0.9929;RSQ=0.9308;ERATE=0.0005;THETA=0.0004;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 24802620 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.961;LDAF=0.0687;AVGPOST=0.9920;RSQ=0.9528;ERATE=0.0006;THETA=0.0015;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 24802655 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.506;LDAF=0.0045;AVGPOST=0.9960;RSQ=0.6504;ERATE=0.0006;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 24802691 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.982;LDAF=0.1267;AVGPOST=0.9942;RSQ=0.9828;ERATE=0.0005;THETA=0.0015;AC=277;AN=2184 GT:DS:GL:BD 0.12683150 0
1 24802705 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.836;LDAF=0.0040;AVGPOST=0.9980;RSQ=0.7935;ERATE=0.0005;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 24802861 . T TG 118 PASS INDEL;BAVGPOST=0.998;BRSQ=0.873;LDAF=0.0077;AVGPOST=0.9961;RSQ=0.8220;ERATE=0.0005;THETA=0.0121;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 24802972 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.968;LDAF=0.0346;AVGPOST=0.9962;RSQ=0.9597;ERATE=0.0004;THETA=0.0033;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 24802990 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.894;LDAF=0.0044;AVGPOST=0.9990;RSQ=0.9090;ERATE=0.0003;THETA=0.0017;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 24802996 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7421;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24803230 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0027;AVGPOST=0.9984;RSQ=0.7865;ERATE=0.0004;THETA=0.0072;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24803349 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.647;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4713;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24803385 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.894;LDAF=0.0067;AVGPOST=0.9967;RSQ=0.7892;ERATE=0.0019;THETA=0.0174;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 24803510 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0061;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24803731 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0213;AVGPOST=0.9995;RSQ=0.9895;ERATE=0.0003;THETA=0.0020;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 24803736 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.981;LDAF=0.3030;AVGPOST=0.9899;RSQ=0.9815;ERATE=0.0005;THETA=0.0038;AC=660;AN=2184 GT:DS:GL:BD 0.30219781 0
1 24803798 . GCA G 154 PASS INDEL;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.5980;ERATE=0.0003;THETA=0.0070;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24803970 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6259;ERATE=0.0003;THETA=0.0093;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24804018 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.984;LDAF=0.3183;AVGPOST=0.9912;RSQ=0.9840;ERATE=0.0006;THETA=0.0073;AC=696;AN=2184 GT:DS:GL:BD 0.31868133 0
1 24804151 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9293;ERATE=0.0003;THETA=0.0051;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24804301 MERGED_DEL_2_2399 T <DEL> . . SV;BAVGPOST=0.954;BRSQ=0.455;LDAF=0.0339;AVGPOST=0.9691;RSQ=0.6407;ERATE=0.0010;THETA=0.0051;CIEND=-178,192;CIPOS=-156,215;END=24809500;SOURCE=CNVnator_24804301_24809500;SVTYPE=DEL;AC=58;AN= GT:DS:GL:BD 0.02655678 0
1 24804536 MERGED_DEL_2_2400 ACCACCACGCACAGCTAATTTTTGTATTTTAGTAGAGACGGGGTTTCACCATGTCGGTCAGGCTGGTCTTGAACCCCTAACCTCAGGTGATCCACCTGCCTCTGCCTCCTGAAGTGCTGGGATTATAGGCATGAACCACTGTGCCCAGCATGTATCATTTCTTTATTTTATTTTATTTATTTATTTTGAG A . . SV;BAVGPOST=0.995;BRSQ=0.980;LDAF=0.1297;AVGPOST=0.9956;RSQ=0.9859;ERATE=0.0007;THETA=0.0014;CIEND=-73,80;CIPOS=-102,55;END=24807440;HOMLEN=9;HOMSEQ=CCACCACGC;SOURCE=BreakDancer_24804527_248 GT:DS:GL:BD 0.12957875 0
1 24804552 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.469;LDAF=0.0118;AVGPOST=0.9860;RSQ=0.5426;ERATE=0.0012;THETA=0.0059;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 24804561 rs66468926 A AT 28 PASS INDEL;BAVGPOST=0.993;BRSQ=0.422;LDAF=0.0096;AVGPOST=0.9894;RSQ=0.5675;ERATE=0.0011;THETA=0.0020;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 24804577 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.924;LDAF=0.2058;AVGPOST=0.9678;RSQ=0.9365;ERATE=0.0016;THETA=0.0045;AC=441;AN=2184 GT:DS:GL:BD 0.20192307 0
1 24804590 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.697;LDAF=0.0072;AVGPOST=0.9957;RSQ=0.7564;ERATE=0.0004;THETA=0.0007;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 24804649 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.7408;ERATE=0.0003;THETA=0.0055;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24804773 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.8960;ERATE=0.0004;THETA=0.0028;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24804792 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.948;LDAF=0.0560;AVGPOST=0.9914;RSQ=0.9546;ERATE=0.0004;THETA=0.0007;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 24804886 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.618;LDAF=0.0029;AVGPOST=0.9957;RSQ=0.4531;ERATE=0.0010;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24804924 . G GT 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4684;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24805356 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.960;LDAF=0.6148;AVGPOST=0.9664;RSQ=0.9582;ERATE=0.0006;THETA=0.0004;AC=1340;AN=2184 GT:DS:GL:BD 0.61355311 1
1 24805554 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.949;LDAF=0.0155;AVGPOST=0.9976;RSQ=0.9348;ERATE=0.0004;THETA=0.0009;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 24805666 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0040;AVGPOST=0.9984;RSQ=0.8252;ERATE=0.0006;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 24805734 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.692;LDAF=0.0072;AVGPOST=0.9920;RSQ=0.6085;ERATE=0.0009;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 24805800 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.950;LDAF=0.0578;AVGPOST=0.9906;RSQ=0.9536;ERATE=0.0004;THETA=0.0005;AC=124;AN=2184 GT:DS:GL:BD 0.05677656 0
1 24805834 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0092;AVGPOST=0.9996;RSQ=0.9829;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 24806146 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.947;LDAF=0.2165;AVGPOST=0.9790;RSQ=0.9580;ERATE=0.0008;THETA=0.0004;AC=464;AN=2184 GT:DS:GL:BD 0.21245421 0
1 24806213 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.959;LDAF=0.5991;AVGPOST=0.9634;RSQ=0.9549;ERATE=0.0009;THETA=0.0004;AC=1311;AN=2184 GT:DS:GL:BD 0.60027474 1
1 24806236 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0093;AVGPOST=0.9995;RSQ=0.9741;ERATE=0.0003;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 24806254 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.782;LDAF=0.0045;AVGPOST=0.9973;RSQ=0.7459;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24806329 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.855;LDAF=0.0158;AVGPOST=0.9977;RSQ=0.9403;ERATE=0.0004;THETA=0.0002;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 24806421 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.924;LDAF=0.0127;AVGPOST=0.9976;RSQ=0.9294;ERATE=0.0005;THETA=0.0007;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 24806435 rs35519394 G GA 5669 PASS INDEL;BAVGPOST=0.864;BRSQ=0.696;LDAF=0.3303;AVGPOST=0.8049;RSQ=0.6323;ERATE=0.0330;THETA=0.0002;AC=632;AN=2184 GT:DS:GL:BD 0.28937730 0
1 24806560 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.951;LDAF=0.2475;AVGPOST=0.9760;RSQ=0.9560;ERATE=0.0014;THETA=0.0003;AC=532;AN=2184 GT:DS:GL:BD 0.24358974 0
1 24806587 . G GA 620 PASS INDEL;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0037;AVGPOST=0.9984;RSQ=0.8130;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24806646 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0093;AVGPOST=0.9995;RSQ=0.9741;ERATE=0.0004;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 24806704 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.952;LDAF=0.3153;AVGPOST=0.9740;RSQ=0.9648;ERATE=0.0006;THETA=0.0014;AC=685;AN=2184 GT:DS:GL:BD 0.31364468 0
1 24806715 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.6320;ERATE=0.0009;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24806763 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0035;AVGPOST=0.9990;RSQ=0.9021;ERATE=0.0004;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24806942 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.741;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4597;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24806972 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.709;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6258;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24806985 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.939;LDAF=0.0171;AVGPOST=0.9958;RSQ=0.9037;ERATE=0.0006;THETA=0.0014;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 24807123 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0009;AVGPOST=0.9981;RSQ=0.1240;ERATE=0.0004;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 24807172 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.759;LDAF=0.0059;AVGPOST=0.9976;RSQ=0.8466;ERATE=0.0003;THETA=0.0009;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 24807184 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.835;LDAF=0.0065;AVGPOST=0.9935;RSQ=0.6169;ERATE=0.0012;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 24807263 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0095;AVGPOST=0.9993;RSQ=0.9628;ERATE=0.0005;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 24807277 . CTCTA C 399 PASS INDEL;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0030;AVGPOST=0.9993;RSQ=0.8983;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24807298 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0018;AVGPOST=0.9988;RSQ=0.7723;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24807359 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.634;LDAF=0.0052;AVGPOST=0.9949;RSQ=0.5869;ERATE=0.0005;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 24807360 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.660;LDAF=0.0114;AVGPOST=0.9904;RSQ=0.6903;ERATE=0.0004;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 24807521 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.977;LDAF=0.5446;AVGPOST=0.9753;RSQ=0.9642;ERATE=0.0035;THETA=0.0024;AC=1194;AN=2184 GT:DS:GL:BD 0.54670328 1
1 24807579 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.1935;AVGPOST=0.9952;RSQ=0.9874;ERATE=0.0004;THETA=0.0004;AC=421;AN=2184 GT:DS:GL:BD 0.19276556 0
1 24807650 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6530;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24807661 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6191;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24807695 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0022;AVGPOST=0.9994;RSQ=0.8682;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24807904 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.941;LDAF=0.0209;AVGPOST=0.9983;RSQ=0.9662;ERATE=0.0004;THETA=0.0004;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 24808262 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0034;AVGPOST=0.9992;RSQ=0.8899;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24808372 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6941;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24808439 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.975;LDAF=0.0346;AVGPOST=0.9983;RSQ=0.9822;ERATE=0.0004;THETA=0.0002;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 24808441 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24808447 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.3577;AVGPOST=0.9967;RSQ=0.9944;ERATE=0.0004;THETA=0.0016;AC=782;AN=2184 GT:DS:GL:BD 0.35805860 0
1 24808599 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.751;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7715;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24809088 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0075;AVGPOST=0.9967;RSQ=0.8127;ERATE=0.0005;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 24809103 rs112656389 CACT C 10979 PASS INDEL;BAVGPOST=0.857;BRSQ=0.776;LDAF=0.5182;AVGPOST=0.8657;RSQ=0.8206;ERATE=0.0093;THETA=0.0049;AC=1175;AN=2184 GT:DS:GL:BD 0.53800368 1
1 24809330 . TAG T 27 PASS INDEL;BAVGPOST=0.999;BRSQ=0.582;LDAF=0.0044;AVGPOST=0.9957;RSQ=0.6089;ERATE=0.0007;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24809439 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0027;AVGPOST=0.9973;RSQ=0.6143;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24809451 . AC A 488 PASS INDEL;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9628;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24809455 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0041;AVGPOST=0.9991;RSQ=0.9145;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 24809462 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.5732;AVGPOST=0.9950;RSQ=0.9921;ERATE=0.0007;THETA=0.0005;AC=1252;AN=2184 GT:DS:GL:BD 0.57326007 1
1 24809653 . TC T 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0047;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24809725 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0203;AVGPOST=0.9996;RSQ=0.9915;ERATE=0.0003;THETA=0.0015;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 24809794 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0017;AVGPOST=0.9980;RSQ=0.4861;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24809916 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5511;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24809943 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0229;AVGPOST=0.9989;RSQ=0.9820;ERATE=0.0004;THETA=0.0006;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 24809948 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.821;LDAF=0.0027;AVGPOST=0.9995;RSQ=0.9202;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24809986 . CA C 729 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0070;AVGPOST=0.9997;RSQ=0.9780;ERATE=0.0004;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 24810069 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5730;AVGPOST=0.9974;RSQ=0.9960;ERATE=0.0006;THETA=0.0023;AC=1252;AN=2184 GT:DS:GL:BD 0.57326007 1
1 24810168 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0084;AVGPOST=0.9997;RSQ=0.9857;ERATE=0.0005;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 24810380 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0031;AVGPOST=0.9994;RSQ=0.9247;ERATE=0.0003;THETA=0.0013;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24810405 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.989;LDAF=0.2421;AVGPOST=0.9926;RSQ=0.9854;ERATE=0.0007;THETA=0.0008;AC=527;AN=2184 GT:DS:GL:BD 0.24130036 0
1 24810481 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.5787;ERATE=0.0004;THETA=0.0057;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24810482 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6915;ERATE=0.0003;THETA=0.0037;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24810493 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0229;AVGPOST=0.9990;RSQ=0.9833;ERATE=0.0003;THETA=0.0003;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 24810502 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7533;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24810521 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.8314;ERATE=0.0004;THETA=0.0035;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24810855 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0147;AVGPOST=0.9988;RSQ=0.9673;ERATE=0.0004;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 24810909 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0035;AVGPOST=0.9982;RSQ=0.8154;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24810915 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5998;AVGPOST=0.9954;RSQ=0.9928;ERATE=0.0005;THETA=0.0032;AC=1311;AN=2184 GT:DS:GL:BD 0.60027474 1
1 24810944 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0106;AVGPOST=0.9992;RSQ=0.9680;ERATE=0.0003;THETA=0.0065;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 24810960 . TC T 739 PASS INDEL;BAVGPOST=0.996;BRSQ=0.761;LDAF=0.0082;AVGPOST=0.9972;RSQ=0.8586;ERATE=0.0004;THETA=0.0018;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 24811494 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.962;LDAF=0.2421;AVGPOST=0.9899;RSQ=0.9802;ERATE=0.0003;THETA=0.0002;AC=532;AN=2184 GT:DS:GL:BD 0.24358974 0
1 24811495 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.962;LDAF=0.2421;AVGPOST=0.9905;RSQ=0.9809;ERATE=0.0004;THETA=0.0005;AC=532;AN=2184 GT:DS:GL:BD 0.24358974 0
1 24811549 . GGTGCAAT G 433 PASS INDEL;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8827;ERATE=0.0004;THETA=0.0017;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24811670 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6681;ERATE=0.0005;THETA=0.0046;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24811686 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.715;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24811935 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8373;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24812157 . T TC 320 PASS INDEL;BAVGPOST=0.998;BRSQ=0.671;LDAF=0.0052;AVGPOST=0.9951;RSQ=0.5938;ERATE=0.0019;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24812229 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.765;LDAF=0.0023;AVGPOST=0.9985;RSQ=0.7144;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24812390 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0054;AVGPOST=0.9993;RSQ=0.9434;ERATE=0.0003;THETA=0.0054;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 24812557 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.943;LDAF=0.2370;AVGPOST=0.9903;RSQ=0.9797;ERATE=0.0011;THETA=0.0005;AC=523;AN=2184 GT:DS:GL:BD 0.23946886 0
1 24812769 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.373;LDAF=0.0066;AVGPOST=0.9923;RSQ=0.5169;ERATE=0.0006;THETA=0.0024;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 24812795 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.985;LDAF=0.2055;AVGPOST=0.9895;RSQ=0.9768;ERATE=0.0013;THETA=0.0005;AC=447;AN=2184 GT:DS:GL:BD 0.20467032 0
1 24813085 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9670;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24813143 . CT C 128 PASS INDEL;BAVGPOST=1.000;BRSQ=0.704;LDAF=0.0027;AVGPOST=0.9971;RSQ=0.5382;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24813155 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2444;AVGPOST=0.9984;RSQ=0.9966;ERATE=0.0006;THETA=0.0003;AC=534;AN=2184 GT:DS:GL:BD 0.24450549 0
1 24813162 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0111;AVGPOST=0.9994;RSQ=0.9756;ERATE=0.0003;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 24813422 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2362;AVGPOST=0.9993;RSQ=0.9984;ERATE=0.0004;THETA=0.0004;AC=516;AN=2184 GT:DS:GL:BD 0.23626374 0
1 24813564 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0252;AVGPOST=0.9998;RSQ=0.9966;ERATE=0.0003;THETA=0.0003;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 24813671 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2436;AVGPOST=0.9973;RSQ=0.9944;ERATE=0.0004;THETA=0.0004;AC=532;AN=2184 GT:DS:GL:BD 0.24358974 0
1 24813721 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0033;AVGPOST=0.9993;RSQ=0.9098;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24813748 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.841;LDAF=0.0075;AVGPOST=0.9983;RSQ=0.8967;ERATE=0.0007;THETA=0.0008;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 24813751 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0036;AVGPOST=0.9953;RSQ=0.5765;ERATE=0.0004;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24813764 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0015;AVGPOST=0.9985;RSQ=0.5921;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24813810 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.870;LDAF=0.0024;AVGPOST=0.9978;RSQ=0.6457;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24813850 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5253;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24813970 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0258;AVGPOST=0.9983;RSQ=0.9694;ERATE=0.0005;THETA=0.0003;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 24814204 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24814276 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.681;LDAF=0.0012;AVGPOST=0.9983;RSQ=0.5054;ERATE=0.0003;THETA=0.0037;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24814523 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.5855;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24814592 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0016;AVGPOST=0.9980;RSQ=0.5179;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24814821 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.949;LDAF=0.1019;AVGPOST=0.9931;RSQ=0.9740;ERATE=0.0004;THETA=0.0026;AC=221;AN=2184 GT:DS:GL:BD 0.10119048 0
1 24814904 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6413;AVGPOST=0.9943;RSQ=0.9919;ERATE=0.0004;THETA=0.0010;AC=1404;AN=2184 GT:DS:GL:BD 0.64285713 1
1 24814926 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.8075;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24814990 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5830;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24815099 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8112;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24815106 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0006;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24815279 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.832;LDAF=0.0041;AVGPOST=0.9969;RSQ=0.7095;ERATE=0.0006;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24815402 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.3607;AVGPOST=0.9951;RSQ=0.9926;ERATE=0.0009;THETA=0.0005;AC=788;AN=2184 GT:DS:GL:BD 0.36080587 0
1 24815444 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.889;LDAF=0.0074;AVGPOST=0.9934;RSQ=0.6408;ERATE=0.0009;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 24815505 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.734;LDAF=0.0043;AVGPOST=0.9953;RSQ=0.6085;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24815539 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0032;AVGPOST=0.9992;RSQ=0.8768;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24815601 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0115;AVGPOST=0.9990;RSQ=0.9691;ERATE=0.0003;THETA=0.0009;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 24815660 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8292;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24815870 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1176;AVGPOST=0.9984;RSQ=0.9946;ERATE=0.0003;THETA=0.0003;AC=256;AN=2184 GT:DS:GL:BD 0.11721612 0
1 24815899 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24816155 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7756;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24816165 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.6394;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24816232 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0254;AVGPOST=0.9994;RSQ=0.9907;ERATE=0.0003;THETA=0.0003;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 24816383 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.966;LDAF=0.0420;AVGPOST=0.9967;RSQ=0.9711;ERATE=0.0005;THETA=0.0005;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 24816398 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2357;AVGPOST=0.9975;RSQ=0.9950;ERATE=0.0004;THETA=0.0003;AC=513;AN=2184 GT:DS:GL:BD 0.23489010 0
1 24816487 . AG A 52 PASS INDEL;BAVGPOST=0.999;BRSQ=0.682;LDAF=0.0029;AVGPOST=0.9968;RSQ=0.5388;ERATE=0.0005;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24816573 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.578;LDAF=0.0022;AVGPOST=0.9968;RSQ=0.3657;ERATE=0.0007;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24816648 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.637;LDAF=0.0034;AVGPOST=0.9974;RSQ=0.6990;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24816729 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.6424;AVGPOST=0.9953;RSQ=0.9927;ERATE=0.0005;THETA=0.0004;AC=1408;AN=2184 GT:DS:GL:BD 0.64468867 1
1 24816799 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.517;LDAF=0.0048;AVGPOST=0.9942;RSQ=0.5261;ERATE=0.0011;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24816853 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.897;LDAF=0.0192;AVGPOST=0.9929;RSQ=0.8503;ERATE=0.0006;THETA=0.0001;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 24816868 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.737;LDAF=0.0017;AVGPOST=0.9980;RSQ=0.5444;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24816871 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.580;LDAF=0.0055;AVGPOST=0.9975;RSQ=0.8248;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 24816950 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2360;AVGPOST=0.9989;RSQ=0.9976;ERATE=0.0004;THETA=0.0002;AC=515;AN=2184 GT:DS:GL:BD 0.23580585 0
1 24817008 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9495;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 24817046 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5118;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24817124 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.795;LDAF=0.0022;AVGPOST=0.9986;RSQ=0.7520;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24817165 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6309;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24817260 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24817307 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0024;AVGPOST=0.9978;RSQ=0.6776;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24817321 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2368;AVGPOST=0.9995;RSQ=0.9989;ERATE=0.0004;THETA=0.0014;AC=517;AN=2184 GT:DS:GL:BD 0.23672161 0
1 24817322 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8470;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24817374 rs34036464 G GA 35980 PASS INDEL;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2250;AVGPOST=0.9977;RSQ=0.9950;ERATE=0.0006;THETA=0.0002;AC=492;AN=2184 GT:DS:GL:BD 0.22527473 0
1 24817376 . A AC 7963 PASS INDEL;BAVGPOST=0.984;BRSQ=0.962;LDAF=0.2208;AVGPOST=0.9873;RSQ=0.9746;ERATE=0.0034;THETA=0.0005;AC=483;AN=2184 GT:DS:GL:BD 0.22115384 0
1 24817403 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7860;ERATE=0.0003;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24817525 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1737;AVGPOST=0.9986;RSQ=0.9960;ERATE=0.0004;THETA=0.0005;AC=380;AN=2184 GT:DS:GL:BD 0.17399268 0
1 24817546 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24817603 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24817637 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.909;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9863;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 24817637 . TTA T 335 PASS INDEL;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24817754 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0032;AVGPOST=0.9992;RSQ=0.8855;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24817826 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8646;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24817849 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9591;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 24817890 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.849;LDAF=0.0075;AVGPOST=0.9996;RSQ=0.9738;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 24817898 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.848;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9496;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 24817908 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6566;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24817934 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0529;AVGPOST=0.9993;RSQ=0.9948;ERATE=0.0004;THETA=0.0006;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 24817956 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0121;AVGPOST=0.9984;RSQ=0.9560;ERATE=0.0003;THETA=0.0002;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 24818245 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24818327 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24818438 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0263;AVGPOST=0.9979;RSQ=0.9698;ERATE=0.0004;THETA=0.0003;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 24818499 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6416;AVGPOST=0.9971;RSQ=0.9954;ERATE=0.0005;THETA=0.0002;AC=1402;AN=2184 GT:DS:GL:BD 0.64194137 1
1 24818623 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24818769 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0145;AVGPOST=0.9994;RSQ=0.9811;ERATE=0.0006;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 24818851 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24818922 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.7245;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24819056 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1104;AVGPOST=0.9993;RSQ=0.9978;ERATE=0.0004;THETA=0.0003;AC=241;AN=2184 GT:DS:GL:BD 0.11034799 0
1 24819269 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0037;AVGPOST=0.9984;RSQ=0.8384;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24819467 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9734;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24819528 . G GT 482 PASS INDEL;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0056;AVGPOST=0.9971;RSQ=0.8184;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 24819609 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.752;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7101;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24819627 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4728;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24819654 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0534;AVGPOST=0.9982;RSQ=0.9885;ERATE=0.0004;THETA=0.0005;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 24819656 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.885;LDAF=0.0230;AVGPOST=0.9932;RSQ=0.8839;ERATE=0.0005;THETA=0.0003;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 24819678 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.988;LDAF=0.1287;AVGPOST=0.9977;RSQ=0.9915;ERATE=0.0007;THETA=0.0002;AC=281;AN=2184 GT:DS:GL:BD 0.12866300 0
1 24819820 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.6263;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24819891 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8236;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24819932 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8182;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24820145 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6141;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24820158 . G GT 38 PASS INDEL;BAVGPOST=0.995;BRSQ=0.712;LDAF=0.0153;AVGPOST=0.9831;RSQ=0.5546;ERATE=0.0070;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 24820182 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.845;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9208;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24820435 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0021;AVGPOST=0.9987;RSQ=0.7467;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24820475 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.745;LDAF=0.0020;AVGPOST=0.9969;RSQ=0.4512;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24820620 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0121;AVGPOST=0.9977;RSQ=0.9363;ERATE=0.0003;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 24820695 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.732;LDAF=0.0035;AVGPOST=0.9979;RSQ=0.7567;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24820707 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0005;AVGPOST=0.9989;RSQ=0.1404;ERATE=0.0005;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 24820768 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.807;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8662;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24820810 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0074;AVGPOST=0.9998;RSQ=0.9880;ERATE=0.0003;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 24820840 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1098;AVGPOST=0.9995;RSQ=0.9981;ERATE=0.0004;THETA=0.0004;AC=240;AN=2184 GT:DS:GL:BD 0.10989011 0
1 24820879 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.893;LDAF=0.0088;AVGPOST=0.9984;RSQ=0.9299;ERATE=0.0003;THETA=0.0010;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 24821044 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0043;AVGPOST=0.9987;RSQ=0.8884;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 24821220 . AAC A 70 PASS INDEL;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0024;AVGPOST=0.9969;RSQ=0.5506;ERATE=0.0008;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24821396 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.656;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24821423 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6756;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24821480 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.977;LDAF=0.1225;AVGPOST=0.9979;RSQ=0.9912;ERATE=0.0005;THETA=0.0004;AC=268;AN=2184 GT:DS:GL:BD 0.12271062 0
1 24821604 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.828;LDAF=0.0116;AVGPOST=0.9934;RSQ=0.7839;ERATE=0.0005;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 24821720 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0317;AVGPOST=0.9985;RSQ=0.9818;ERATE=0.0004;THETA=0.0003;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 24821731 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.516;LDAF=0.0018;AVGPOST=0.9974;RSQ=0.3794;ERATE=0.0007;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24821755 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.784;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7838;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24821793 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0019;AVGPOST=0.9996;RSQ=0.9015;ERATE=0.0003;THETA=0.0014;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24821920 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8316;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24821922 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0332;AVGPOST=0.9978;RSQ=0.9776;ERATE=0.0004;THETA=0.0004;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 24821951 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.8190;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24822024 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.1239;AVGPOST=0.9986;RSQ=0.9950;ERATE=0.0003;THETA=0.0003;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 24822175 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0131;AVGPOST=0.9994;RSQ=0.9810;ERATE=0.0003;THETA=0.0001;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 24822255 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.724;LDAF=0.0034;AVGPOST=0.9977;RSQ=0.7477;ERATE=0.0004;THETA=0.0016;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24822343 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7769;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24822419 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2383;AVGPOST=0.9974;RSQ=0.9950;ERATE=0.0004;THETA=0.0007;AC=520;AN=2184 GT:DS:GL:BD 0.23809524 0
1 24822456 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5045;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24822500 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4051;AVGPOST=0.9979;RSQ=0.9974;ERATE=0.0004;THETA=0.0003;AC=885;AN=2184 GT:DS:GL:BD 0.40521979 0
1 24822510 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0045;AVGPOST=0.9992;RSQ=0.9188;ERATE=0.0003;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 24822532 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0129;AVGPOST=0.9999;RSQ=0.9948;ERATE=0.0003;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 24822567 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24822568 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0024;AVGPOST=0.9968;RSQ=0.5299;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24822667 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24822714 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5569;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24822716 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.737;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6465;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24822880 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0070;AVGPOST=0.9996;RSQ=0.9753;ERATE=0.0003;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 24823091 . A AG 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5972;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24823121 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2387;AVGPOST=0.9979;RSQ=0.9953;ERATE=0.0004;THETA=0.0004;AC=520;AN=2184 GT:DS:GL:BD 0.23809524 0
1 24823146 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.7113;ERATE=0.0003;THETA=0.0029;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24823224 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.598;LDAF=0.0146;AVGPOST=0.9940;RSQ=0.8528;ERATE=0.0003;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 24823301 rs111987960 GA G 436 PASS INDEL;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0071;AVGPOST=0.9993;RSQ=0.9538;ERATE=0.0004;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 24823411 rs79184751 A AC 835 PASS INDEL;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0137;AVGPOST=0.9978;RSQ=0.9322;ERATE=0.0005;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 24823412 . A AC 976 PASS INDEL;BAVGPOST=0.993;BRSQ=0.802;LDAF=0.0230;AVGPOST=0.9916;RSQ=0.8589;ERATE=0.0008;THETA=0.0007;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 24823413 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0104;AVGPOST=0.9979;RSQ=0.9114;ERATE=0.0005;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 24823528 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0293;AVGPOST=0.9989;RSQ=0.9858;ERATE=0.0004;THETA=0.0003;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 24823581 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0036;AVGPOST=0.9978;RSQ=0.7763;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24823599 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8720;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24823697 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.890;LDAF=0.0061;AVGPOST=0.9956;RSQ=0.6972;ERATE=0.0011;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 24823735 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.9159;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24823808 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=1.0000;AVGPOST=1.0000;RSQ=0.0500;ERATE=0.0003;THETA=0.0003;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 24823861 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.810;LDAF=0.0030;AVGPOST=0.9987;RSQ=0.8506;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24823891 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9019;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24823995 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8482;ERATE=0.0004;THETA=0.0018;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24824232 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.8031;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24824356 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24824473 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.707;LDAF=0.0025;AVGPOST=0.9983;RSQ=0.7125;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24824539 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6313;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24824741 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0113;AVGPOST=0.9992;RSQ=0.9760;ERATE=0.0004;THETA=0.0023;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 24825005 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6849;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24825031 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4508;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24825049 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0033;AVGPOST=0.9986;RSQ=0.8731;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24825090 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8091;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24825103 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24825131 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0024;AVGPOST=0.9995;RSQ=0.9110;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24825168 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0043;AVGPOST=0.9983;RSQ=0.8487;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 24825187 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9554;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24825262 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.889;LDAF=0.0024;AVGPOST=0.9995;RSQ=0.9118;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24825430 . CT C 61 PASS INDEL;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6377;ERATE=0.0003;THETA=0.0068;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24825455 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0038;AVGPOST=0.9998;RSQ=0.9710;ERATE=0.0003;THETA=0.0018;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 24825507 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5946;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24825832 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0026;AVGPOST=0.9989;RSQ=0.8090;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24825946 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9809;ERATE=0.0003;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 24825966 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.960;LDAF=0.3069;AVGPOST=0.9867;RSQ=0.9761;ERATE=0.0010;THETA=0.0005;AC=662;AN=2184 GT:DS:GL:BD 0.30311355 0
1 24826077 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24826104 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5224;AVGPOST=0.9987;RSQ=0.9978;ERATE=0.0004;THETA=0.0005;AC=1141;AN=2184 GT:DS:GL:BD 0.52243590 1
1 24826163 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8497;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24826178 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0070;AVGPOST=0.9998;RSQ=0.9845;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 24826243 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0048;AVGPOST=0.9990;RSQ=0.9164;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 24826249 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.4468;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24826281 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24826289 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7731;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24826290 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24826421 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0160;AVGPOST=0.9995;RSQ=0.9847;ERATE=0.0003;THETA=0.0006;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 24826450 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0027;AVGPOST=0.9996;RSQ=0.9438;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24826457 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5346;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24826535 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24826572 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.889;LDAF=0.0035;AVGPOST=0.9991;RSQ=0.8840;ERATE=0.0007;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24826587 rs10618091 AAT A 30684 PASS INDEL;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.2714;AVGPOST=0.9969;RSQ=0.9931;ERATE=0.0006;THETA=0.0003;AC=592;AN=2184 GT:DS:GL:BD 0.27106228 0
1 24826805 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0017;AVGPOST=0.9980;RSQ=0.4969;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24826851 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.483;LDAF=0.0134;AVGPOST=0.9889;RSQ=0.6892;ERATE=0.0005;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 24826878 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0072;AVGPOST=0.9961;RSQ=0.7850;ERATE=0.0007;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 24826885 . TCAA T 1587 PASS INDEL;BAVGPOST=0.920;BRSQ=0.744;LDAF=0.1531;AVGPOST=0.9568;RSQ=0.8816;ERATE=0.0029;THETA=0.0003;AC=327;AN=2184 GT:DS:GL:BD 0.14972527 0
1 24826955 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7787;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24827076 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0056;AVGPOST=0.9992;RSQ=0.9404;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 24827084 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0027;AVGPOST=0.9994;RSQ=0.9028;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24827282 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2163;AVGPOST=0.9987;RSQ=0.9971;ERATE=0.0004;THETA=0.0005;AC=472;AN=2184 GT:DS:GL:BD 0.21611722 0
1 24827318 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0066;AVGPOST=0.9984;RSQ=0.9046;ERATE=0.0004;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 24827402 . G GA 992 PASS INDEL;BAVGPOST=0.998;BRSQ=0.783;LDAF=0.0066;AVGPOST=0.9962;RSQ=0.7635;ERATE=0.0012;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 24827750 . CTG C 83 PASS INDEL;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0031;AVGPOST=0.9968;RSQ=0.6108;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24827769 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9132;ERATE=0.0004;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24827782 . AC A 241 PASS INDEL;BAVGPOST=0.999;BRSQ=0.890;LDAF=0.0048;AVGPOST=0.9985;RSQ=0.8825;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 24827794 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0027;AVGPOST=0.9997;RSQ=0.9565;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24827829 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.935;LDAF=0.0186;AVGPOST=0.9976;RSQ=0.9528;ERATE=0.0004;THETA=0.0006;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 24827894 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0032;AVGPOST=0.9982;RSQ=0.7980;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24828154 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0019;AVGPOST=0.9991;RSQ=0.8556;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24828431 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.830;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8788;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24828520 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0027;AVGPOST=0.9995;RSQ=0.9318;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24828573 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24828599 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6633;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24828744 rs71742553 AGGAGGGGAGGGGATG A 19054 PASS INDEL;BAVGPOST=0.984;BRSQ=0.963;LDAF=0.2853;AVGPOST=0.9741;RSQ=0.9501;ERATE=0.0018;THETA=0.0003;AC=613;AN=2184 GT:DS:GL:BD 0.28067765 0
1 24828766 . G GTA 58 PASS INDEL;BAVGPOST=0.975;BRSQ=0.321;LDAF=0.0325;AVGPOST=0.9536;RSQ=0.4340;ERATE=0.0037;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 24828929 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.984;LDAF=0.1875;AVGPOST=0.9952;RSQ=0.9877;ERATE=0.0008;THETA=0.0004;AC=408;AN=2184 GT:DS:GL:BD 0.18681319 0
1 24828933 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.551;LDAF=0.0032;AVGPOST=0.9945;RSQ=0.3571;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24828970 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0067;AVGPOST=0.9960;RSQ=0.7504;ERATE=0.0005;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 24828973 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.426;LDAF=0.0239;AVGPOST=0.9718;RSQ=0.5531;ERATE=0.0048;THETA=0.0002;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 24829120 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.0057;AVGPOST=0.9947;RSQ=0.6270;ERATE=0.0008;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 24829434 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.946;BRSQ=0.348;LDAF=0.0639;AVGPOST=0.9450;RSQ=0.6473;ERATE=0.0025;THETA=0.0016;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 24829514 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.918;BRSQ=0.305;LDAF=0.1149;AVGPOST=0.8766;RSQ=0.5588;ERATE=0.0045;THETA=0.0003;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 24829685 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.847;BRSQ=0.381;LDAF=0.2068;AVGPOST=0.7909;RSQ=0.5007;ERATE=0.0165;THETA=0.0003;AC=339;AN=2184 GT:DS:GL:BD 0.15521978 0
1 24829809 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.952;LDAF=0.0253;AVGPOST=0.9894;RSQ=0.8294;ERATE=0.0008;THETA=0.0004;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 24829868 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.581;LDAF=0.0038;AVGPOST=0.9958;RSQ=0.5484;ERATE=0.0005;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24829901 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0145;AVGPOST=0.9989;RSQ=0.9621;ERATE=0.0004;THETA=0.0018;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 24829922 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.967;LDAF=0.0145;AVGPOST=0.9992;RSQ=0.9728;ERATE=0.0004;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 24830080 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.814;LDAF=0.0069;AVGPOST=0.9964;RSQ=0.8033;ERATE=0.0005;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 24830107 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7724;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24830116 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0136;AVGPOST=0.9988;RSQ=0.9579;ERATE=0.0005;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 24830132 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6684;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24830143 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7756;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24830163 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.6574;AVGPOST=0.9974;RSQ=0.9958;ERATE=0.0004;THETA=0.0004;AC=1436;AN=2184 GT:DS:GL:BD 0.65750915 1
1 24830234 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24830374 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5241;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24830498 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7096;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24830582 . CTG C 134 PASS INDEL;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.6079;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24830617 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.4748;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24830648 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24830706 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6474;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24830747 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.767;LDAF=0.0058;AVGPOST=0.9993;RSQ=0.9526;ERATE=0.0004;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 24830779 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.948;LDAF=0.0273;AVGPOST=0.9934;RSQ=0.9083;ERATE=0.0003;THETA=0.0002;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 24830918 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0077;AVGPOST=0.9983;RSQ=0.9078;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 24830955 rs11438173 G GC 41052 PASS INDEL;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5053;AVGPOST=0.9956;RSQ=0.9933;ERATE=0.0008;THETA=0.0004;AC=1104;AN=2184 GT:DS:GL:BD 0.50549453 1
1 24831034 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0037;AVGPOST=0.9997;RSQ=0.9660;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 24831081 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9267;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24831100 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7367;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24831112 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6259;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24831121 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.764;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8888;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24831304 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0079;AVGPOST=0.9997;RSQ=0.9832;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 24831342 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24831412 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0044;AVGPOST=0.9992;RSQ=0.9296;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 24831553 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.864;LDAF=0.0026;AVGPOST=0.9985;RSQ=0.7523;ERATE=0.0012;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24831638 . GC G 46 PASS INDEL;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.6955;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24831643 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1903;AVGPOST=0.9988;RSQ=0.9968;ERATE=0.0005;THETA=0.0004;AC=415;AN=2184 GT:DS:GL:BD 0.19001831 0
1 24831652 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0018;AVGPOST=0.9996;RSQ=0.9164;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24831663 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1183;AVGPOST=0.9976;RSQ=0.9929;ERATE=0.0003;THETA=0.0004;AC=259;AN=2184 GT:DS:GL:BD 0.11858974 0
1 24831672 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0171;AVGPOST=0.9996;RSQ=0.9899;ERATE=0.0003;THETA=0.0002;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 24831701 . G GT 2154 PASS INDEL;BAVGPOST=0.928;BRSQ=0.604;LDAF=0.1421;AVGPOST=0.8590;RSQ=0.5197;ERATE=0.0384;THETA=0.0003;AC=194;AN=2184 GT:DS:GL:BD 0.08882784 0
1 24831845 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5467;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24831914 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0337;AVGPOST=0.9971;RSQ=0.9642;ERATE=0.0007;THETA=0.0004;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 24831915 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.3608;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24831922 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0180;AVGPOST=0.9985;RSQ=0.9651;ERATE=0.0006;THETA=0.0005;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 24831933 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0059;AVGPOST=0.9971;RSQ=0.7964;ERATE=0.0005;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 24831998 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0090;AVGPOST=0.9958;RSQ=0.8367;ERATE=0.0005;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 24832010 . T TC 18 PASS INDEL;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.3725;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24832084 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.723;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.7043;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24832117 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.5027;AVGPOST=0.9929;RSQ=0.9894;ERATE=0.0009;THETA=0.0009;AC=1096;AN=2184 GT:DS:GL:BD 0.50183153 1
1 24832258 . CA C 1156 PASS INDEL;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0155;AVGPOST=0.9984;RSQ=0.9630;ERATE=0.0003;THETA=0.0007;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 24832298 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0311;AVGPOST=0.9995;RSQ=0.9935;ERATE=0.0003;THETA=0.0006;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 24832318 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0161;AVGPOST=0.9990;RSQ=0.9780;ERATE=0.0003;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 24832406 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9164;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24832417 . A AG 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.773;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7185;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24832484 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9666;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24832541 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.8224;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24832617 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9539;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24832638 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5926;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24832732 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0041;AVGPOST=0.9997;RSQ=0.9635;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 24832734 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.1879;AVGPOST=0.9984;RSQ=0.9956;ERATE=0.0004;THETA=0.0007;AC=411;AN=2184 GT:DS:GL:BD 0.18818681 0
1 24832767 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6850;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24832886 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5208;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24832960 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.687;LDAF=0.0021;AVGPOST=0.9981;RSQ=0.6421;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24833016 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8371;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24833340 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.936;LDAF=0.0242;AVGPOST=0.9984;RSQ=0.9696;ERATE=0.0003;THETA=0.0037;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 24833475 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6318;ERATE=0.0003;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24833520 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9233;ERATE=0.0003;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24833745 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7899;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24833936 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.6215;AVGPOST=0.9973;RSQ=0.9956;ERATE=0.0008;THETA=0.0005;AC=1357;AN=2184 GT:DS:GL:BD 0.62133700 1
1 24833973 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24834001 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.6591;AVGPOST=0.9973;RSQ=0.9959;ERATE=0.0005;THETA=0.0007;AC=1440;AN=2184 GT:DS:GL:BD 0.65934068 1
1 24834282 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24834314 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0157;AVGPOST=0.9989;RSQ=0.9658;ERATE=0.0004;THETA=0.0002;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 24834482 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.420;LDAF=0.0018;AVGPOST=0.9987;RSQ=0.7002;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24834485 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6471;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24834526 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0038;AVGPOST=0.9989;RSQ=0.9044;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24834604 . C CA 87 PASS INDEL;BAVGPOST=0.980;BRSQ=0.492;LDAF=0.0442;AVGPOST=0.9411;RSQ=0.4504;ERATE=0.0119;THETA=0.0006;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 24834619 . GAAAA G 141 PASS INDEL;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6596;ERATE=0.0004;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24834735 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9741;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24834801 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7349;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24834855 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0157;AVGPOST=0.9997;RSQ=0.9911;ERATE=0.0003;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 24834863 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7425;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24834937 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6151;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24834965 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0004;AVGPOST=0.9997;RSQ=0.7060;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24834973 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0047;AVGPOST=0.9988;RSQ=0.8883;ERATE=0.0003;THETA=0.0011;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 24834979 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.6712;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24835018 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8079;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24835063 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8338;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24835064 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7386;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24835180 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.5454;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24835181 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.786;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9107;ERATE=0.0003;THETA=0.0036;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24835194 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5913;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24835230 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24835278 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24835393 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.8026;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24835566 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.903;LDAF=0.0046;AVGPOST=0.9981;RSQ=0.8254;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 24835633 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0216;AVGPOST=0.9998;RSQ=0.9958;ERATE=0.0003;THETA=0.0002;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 24835645 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24835692 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0144;AVGPOST=0.9994;RSQ=0.9852;ERATE=0.0003;THETA=0.0007;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 24836152 . G GA 448 PASS INDEL;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0026;AVGPOST=0.9984;RSQ=0.7878;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24836160 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7798;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24836412 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5416;AVGPOST=0.9984;RSQ=0.9973;ERATE=0.0004;THETA=0.0004;AC=1182;AN=2184 GT:DS:GL:BD 0.54120880 1
1 24836440 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0144;AVGPOST=0.9986;RSQ=0.9703;ERATE=0.0003;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 24836450 . TCTC T 5614 PASS INDEL;BAVGPOST=0.998;BRSQ=0.949;LDAF=0.0180;AVGPOST=0.9985;RSQ=0.9652;ERATE=0.0003;THETA=0.0006;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 24836474 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0008;AVGPOST=0.9998;RSQ=0.9110;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24836529 . CT C 20 PASS INDEL;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5064;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24836544 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.860;LDAF=0.0075;AVGPOST=0.9974;RSQ=0.8511;ERATE=0.0004;THETA=0.0046;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 24836587 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0024;AVGPOST=0.9991;RSQ=0.8417;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24836601 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0020;AVGPOST=0.9994;RSQ=0.8562;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24836624 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.898;LDAF=0.0044;AVGPOST=0.9985;RSQ=0.8748;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 24836703 rs71577714 C CTT 81012 PASS INDEL;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5370;AVGPOST=0.9952;RSQ=0.9931;ERATE=0.0011;THETA=0.0007;AC=1173;AN=2184 GT:DS:GL:BD 0.53708792 1
1 24836733 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24836734 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0182;AVGPOST=0.9993;RSQ=0.9824;ERATE=0.0003;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 24836775 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.869;LDAF=0.0124;AVGPOST=0.9979;RSQ=0.9283;ERATE=0.0003;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 24836821 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.8147;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24836885 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4306;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24837000 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5353;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24837014 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9496;ERATE=0.0006;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 24837032 . G GCT 83 PASS INDEL;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5451;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24837171 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7301;ERATE=0.0003;THETA=0.0027;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24837222 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5981;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24837225 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0036;AVGPOST=0.9994;RSQ=0.9294;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 24837346 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6964;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24837415 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8260;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24837440 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.0693;AVGPOST=0.9955;RSQ=0.9781;ERATE=0.0006;THETA=0.0006;AC=148;AN=2184 GT:DS:GL:BD 0.06776557 0
1 24837541 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0035;AVGPOST=0.9984;RSQ=0.7956;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24837578 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.936;LDAF=0.0266;AVGPOST=0.9977;RSQ=0.9652;ERATE=0.0004;THETA=0.0003;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 24837599 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.983;LDAF=0.6466;AVGPOST=0.9869;RSQ=0.9815;ERATE=0.0018;THETA=0.0005;AC=1414;AN=2184 GT:DS:GL:BD 0.64743590 1
1 24837683 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0052;AVGPOST=0.9970;RSQ=0.7948;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 24837781 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.895;LDAF=0.0081;AVGPOST=0.9957;RSQ=0.7878;ERATE=0.0017;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 24837850 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0072;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24837879 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0110;AVGPOST=0.9999;RSQ=0.9945;ERATE=0.0003;THETA=0.0017;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 24837898 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0043;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24838097 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2481;AVGPOST=0.9966;RSQ=0.9928;ERATE=0.0003;THETA=0.0008;AC=542;AN=2184 GT:DS:GL:BD 0.24816850 0
1 24838226 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24838229 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0466;AVGPOST=1.0000;RSQ=0.9996;ERATE=0.0003;THETA=0.0004;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 24838246 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5081;AVGPOST=0.9978;RSQ=0.9966;ERATE=0.0005;THETA=0.0005;AC=1108;AN=2184 GT:DS:GL:BD 0.50732601 1
1 24838305 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9547;ERATE=0.0003;THETA=0.0037;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 24838306 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5643;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24838376 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.773;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5836;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24838416 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0021;AVGPOST=0.9988;RSQ=0.7824;ERATE=0.0004;THETA=0.0020;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24838493 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5880;AVGPOST=0.9982;RSQ=0.9969;ERATE=0.0005;THETA=0.0005;AC=1284;AN=2184 GT:DS:GL:BD 0.58791208 1
1 24838606 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0036;AVGPOST=0.9984;RSQ=0.8362;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24838614 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0159;AVGPOST=0.9992;RSQ=0.9787;ERATE=0.0003;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 24838655 . CAT C 133 PASS INDEL;BAVGPOST=0.996;BRSQ=0.629;LDAF=0.0029;AVGPOST=0.9987;RSQ=0.8523;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24838860 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24839158 . GA G 171 PASS INDEL;BAVGPOST=0.999;BRSQ=0.790;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.7884;ERATE=0.0003;THETA=0.0016;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24839187 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0207;AVGPOST=0.9998;RSQ=0.9957;ERATE=0.0003;THETA=0.0004;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 24839273 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7608;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24839311 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.722;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6758;ERATE=0.0004;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24839312 . CT C 32 PASS INDEL;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4978;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24839372 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9133;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24839402 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5951;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24839430 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0067;AVGPOST=0.9980;RSQ=0.8891;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 24839479 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0445;AVGPOST=0.9996;RSQ=0.9958;ERATE=0.0004;THETA=0.0004;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 24839505 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6009;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24839588 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0690;AVGPOST=0.9979;RSQ=0.9898;ERATE=0.0003;THETA=0.0005;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 24839714 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.943;LDAF=0.0179;AVGPOST=0.9964;RSQ=0.9202;ERATE=0.0005;THETA=0.0008;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 24839846 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7311;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24840031 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8666;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24840045 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0019;AVGPOST=0.9994;RSQ=0.8636;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24840136 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.522;LDAF=0.0017;AVGPOST=0.9976;RSQ=0.4963;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24840632 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24840677 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24840698 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24840768 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6505;AVGPOST=0.9995;RSQ=0.9992;ERATE=0.0003;THETA=0.0004;AC=1421;AN=2184 GT:DS:GL:BD 0.65064102 1
1 24840882 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24840905 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24841184 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24841315 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8404;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24841330 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0033;AVGPOST=0.9990;RSQ=0.8862;ERATE=0.0004;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24841358 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0207;AVGPOST=0.9997;RSQ=0.9934;ERATE=0.0003;THETA=0.0004;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 24841445 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.988;LDAF=0.6450;AVGPOST=0.9895;RSQ=0.9839;ERATE=0.0018;THETA=0.0003;AC=1412;AN=2184 GT:DS:GL:BD 0.64652014 1
1 24841626 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24841724 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0140;AVGPOST=0.9983;RSQ=0.9569;ERATE=0.0003;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 24841743 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0130;AVGPOST=0.9996;RSQ=0.9863;ERATE=0.0004;THETA=0.0007;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 24841974 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0040;AVGPOST=0.9974;RSQ=0.7497;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24841982 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7110;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24842035 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6112;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24842047 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8456;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24842101 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.802;LDAF=0.0025;AVGPOST=0.9980;RSQ=0.6574;ERATE=0.0010;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24842126 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4042;AVGPOST=0.9971;RSQ=0.9952;ERATE=0.0005;THETA=0.0005;AC=881;AN=2184 GT:DS:GL:BD 0.40338829 0
1 24842186 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.953;LDAF=0.0106;AVGPOST=0.9982;RSQ=0.9366;ERATE=0.0004;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 24842548 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.661;LDAF=0.0066;AVGPOST=0.9949;RSQ=0.7405;ERATE=0.0004;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 24842589 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7966;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24842642 . AAAAG A 165 PASS INDEL;BAVGPOST=0.999;BRSQ=0.692;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6428;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24842693 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4969;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24842714 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.849;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7536;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24842770 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.5938;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24842806 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5736;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24842983 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6466;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24843003 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0677;AVGPOST=0.9994;RSQ=0.9962;ERATE=0.0003;THETA=0.0002;AC=148;AN=2184 GT:DS:GL:BD 0.06776557 0
1 24843079 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0216;AVGPOST=0.9995;RSQ=0.9888;ERATE=0.0003;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 24843089 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0224;AVGPOST=0.9983;RSQ=0.9688;ERATE=0.0003;THETA=0.0005;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 24843092 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7905;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24843136 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0218;AVGPOST=0.9985;RSQ=0.9702;ERATE=0.0004;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 24843151 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7751;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24843152 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24843392 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0445;AVGPOST=0.9985;RSQ=0.9869;ERATE=0.0004;THETA=0.0005;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 24843433 . TA T 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24843587 . T TG 87 PASS INDEL;BAVGPOST=0.995;BRSQ=0.725;LDAF=0.0106;AVGPOST=0.9927;RSQ=0.7483;ERATE=0.0006;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 24843674 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0042;AVGPOST=0.9970;RSQ=0.7485;ERATE=0.0005;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24843753 . TG T 124 PASS INDEL;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7210;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24843916 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.830;LDAF=0.0098;AVGPOST=0.9960;RSQ=0.8353;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 24844069 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.917;LDAF=0.0122;AVGPOST=0.9971;RSQ=0.9067;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 24844101 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.7896;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24844106 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1124;AVGPOST=0.9984;RSQ=0.9936;ERATE=0.0003;THETA=0.0005;AC=247;AN=2184 GT:DS:GL:BD 0.11309524 0
1 24844132 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0013;AVGPOST=0.9981;RSQ=0.3993;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24844328 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.6513;AVGPOST=0.9960;RSQ=0.9935;ERATE=0.0007;THETA=0.0003;AC=1423;AN=2184 GT:DS:GL:BD 0.65155679 1
1 24844563 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0027;AVGPOST=0.9970;RSQ=0.5777;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24844734 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0221;AVGPOST=0.9985;RSQ=0.9697;ERATE=0.0005;THETA=0.0011;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 24844805 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1539;AVGPOST=0.9965;RSQ=0.9889;ERATE=0.0003;THETA=0.0008;AC=337;AN=2184 GT:DS:GL:BD 0.15430403 0
1 24844806 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0032;AVGPOST=0.9980;RSQ=0.7604;ERATE=0.0007;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24844841 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0035;AVGPOST=0.9981;RSQ=0.8036;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24844901 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0118;AVGPOST=0.9983;RSQ=0.9398;ERATE=0.0003;THETA=0.0007;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 24844956 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0684;AVGPOST=0.9985;RSQ=0.9931;ERATE=0.0006;THETA=0.0002;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 24844986 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8962;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24845187 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.767;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7421;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24845250 . T TTTA 212 PASS INDEL;BAVGPOST=0.992;BRSQ=0.635;LDAF=0.0101;AVGPOST=0.9901;RSQ=0.6393;ERATE=0.0009;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 24845382 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4866;ERATE=0.0004;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24845504 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.757;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.5443;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24845538 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0256;AVGPOST=0.9973;RSQ=0.9539;ERATE=0.0003;THETA=0.0008;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 24845539 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.974;LDAF=0.1123;AVGPOST=0.9979;RSQ=0.9918;ERATE=0.0005;THETA=0.0006;AC=246;AN=2184 GT:DS:GL:BD 0.11263736 0
1 24845589 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0027;AVGPOST=0.9993;RSQ=0.8743;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24845655 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.950;LDAF=0.1114;AVGPOST=0.9970;RSQ=0.9890;ERATE=0.0005;THETA=0.0005;AC=245;AN=2184 GT:DS:GL:BD 0.11217949 0
1 24845703 . ATG A 807 PASS INDEL;BAVGPOST=0.993;BRSQ=0.778;LDAF=0.0231;AVGPOST=0.9855;RSQ=0.7528;ERATE=0.0022;THETA=0.0002;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 24845856 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24846042 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7543;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24846057 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6526;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24846199 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0220;AVGPOST=0.9990;RSQ=0.9836;ERATE=0.0003;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 24846253 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.779;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8199;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24846511 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6916;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24846574 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7376;ERATE=0.0005;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24846700 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6377;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24846849 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7658;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24847122 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.723;LDAF=0.0037;AVGPOST=0.9954;RSQ=0.5505;ERATE=0.0006;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24847178 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.4000;AVGPOST=0.9870;RSQ=0.9802;ERATE=0.0009;THETA=0.0005;AC=873;AN=2184 GT:DS:GL:BD 0.39972529 0
1 24847291 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.904;LDAF=0.0223;AVGPOST=0.9979;RSQ=0.9652;ERATE=0.0005;THETA=0.0009;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 24847299 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.622;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.6939;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24847317 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0677;AVGPOST=0.9974;RSQ=0.9868;ERATE=0.0005;THETA=0.0010;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 24847334 . AAAAAT A 371 PASS INDEL;BAVGPOST=0.999;BRSQ=0.849;LDAF=0.0097;AVGPOST=0.9925;RSQ=0.6778;ERATE=0.0014;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 24847350 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.871;LDAF=0.0137;AVGPOST=0.9987;RSQ=0.9604;ERATE=0.0004;THETA=0.0015;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 24847467 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24847553 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0021;AVGPOST=0.9975;RSQ=0.5822;ERATE=0.0004;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24847615 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6088;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24847635 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24847636 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0195;AVGPOST=0.9982;RSQ=0.9583;ERATE=0.0005;THETA=0.0005;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 24847652 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4936;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24847772 . A AT 5 PASS INDEL;BAVGPOST=0.999;BRSQ=0.674;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.6044;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24847812 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.863;LDAF=0.0052;AVGPOST=0.9989;RSQ=0.9253;ERATE=0.0003;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 24847894 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24848136 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.968;LDAF=0.1163;AVGPOST=0.9917;RSQ=0.9698;ERATE=0.0016;THETA=0.0005;AC=253;AN=2184 GT:DS:GL:BD 0.11584249 0
1 24848199 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.946;LDAF=0.6214;AVGPOST=0.9490;RSQ=0.9223;ERATE=0.0128;THETA=0.0005;AC=1374;AN=2184 GT:DS:GL:BD 0.62912089 1
1 24848230 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.614;LDAF=0.0033;AVGPOST=0.9961;RSQ=0.5699;ERATE=0.0006;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24848315 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0026;AVGPOST=0.9973;RSQ=0.6067;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24848359 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.621;LDAF=0.0036;AVGPOST=0.9984;RSQ=0.7857;ERATE=0.0006;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24848366 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.983;LDAF=0.1138;AVGPOST=0.9973;RSQ=0.9885;ERATE=0.0005;THETA=0.0007;AC=250;AN=2184 GT:DS:GL:BD 0.11446887 0
1 24848400 . GGT G 372 PASS INDEL;BAVGPOST=0.962;BRSQ=0.790;LDAF=0.1032;AVGPOST=0.9848;RSQ=0.9387;ERATE=0.0005;THETA=0.0004;AC=233;AN=2184 GT:DS:GL:BD 0.10668498 0
1 24848583 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4935;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24848642 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0684;AVGPOST=0.9981;RSQ=0.9905;ERATE=0.0004;THETA=0.0006;AC=148;AN=2184 GT:DS:GL:BD 0.06776557 0
1 24848674 . TAC T 108 PASS INDEL;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0025;AVGPOST=0.9983;RSQ=0.7170;ERATE=0.0006;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24848682 . CAT C 21 PASS INDEL;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5598;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24848684 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1134;AVGPOST=0.9976;RSQ=0.9900;ERATE=0.0006;THETA=0.0003;AC=248;AN=2184 GT:DS:GL:BD 0.11355311 0
1 24848695 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0678;AVGPOST=0.9996;RSQ=0.9975;ERATE=0.0004;THETA=0.0008;AC=148;AN=2184 GT:DS:GL:BD 0.06776557 0
1 24848697 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24848776 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.741;LDAF=0.0072;AVGPOST=0.9947;RSQ=0.7398;ERATE=0.0006;THETA=0.0009;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 24848868 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0677;AVGPOST=0.9998;RSQ=0.9989;ERATE=0.0003;THETA=0.0005;AC=148;AN=2184 GT:DS:GL:BD 0.06776557 0
1 24848949 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7677;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24849053 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0441;AVGPOST=0.9984;RSQ=0.9866;ERATE=0.0004;THETA=0.0014;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 24849055 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0035;AVGPOST=0.9982;RSQ=0.8034;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 24849240 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0680;AVGPOST=0.9990;RSQ=0.9944;ERATE=0.0003;THETA=0.0009;AC=148;AN=2184 GT:DS:GL:BD 0.06776557 0
1 24849345 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1138;AVGPOST=0.9987;RSQ=0.9944;ERATE=0.0005;THETA=0.0006;AC=248;AN=2184 GT:DS:GL:BD 0.11355311 0
1 24849423 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.780;LDAF=0.0036;AVGPOST=0.9972;RSQ=0.7032;ERATE=0.0005;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24849437 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0677;AVGPOST=0.9998;RSQ=0.9986;ERATE=0.0003;THETA=0.0007;AC=148;AN=2184 GT:DS:GL:BD 0.06776557 0
1 24849488 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7185;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24849507 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0672;AVGPOST=0.9984;RSQ=0.9912;ERATE=0.0005;THETA=0.0005;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 24849547 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.690;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4715;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24849615 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0029;AVGPOST=0.9968;RSQ=0.5434;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24849647 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.731;LDAF=0.0026;AVGPOST=0.9991;RSQ=0.8440;ERATE=0.0005;THETA=0.0017;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24849714 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.404;LDAF=0.0041;AVGPOST=0.9943;RSQ=0.4577;ERATE=0.0008;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24849835 . T TA 134 PASS INDEL;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6252;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24849840 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0036;AVGPOST=0.9963;RSQ=0.6481;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24849891 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9539;ERATE=0.0004;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 24849900 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.973;LDAF=0.0805;AVGPOST=0.9963;RSQ=0.9821;ERATE=0.0004;THETA=0.0015;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 24849959 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0677;AVGPOST=0.9992;RSQ=0.9957;ERATE=0.0004;THETA=0.0005;AC=148;AN=2184 GT:DS:GL:BD 0.06776557 0
1 24850044 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.751;LDAF=0.0042;AVGPOST=0.9973;RSQ=0.7529;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 24850048 . T TACAC 6216 PASS INDEL;BAVGPOST=0.981;BRSQ=0.875;LDAF=0.0867;AVGPOST=0.9574;RSQ=0.8235;ERATE=0.0023;THETA=0.0006;AC=180;AN=2184 GT:DS:GL:BD 0.08241758 0
1 24850056 rs10633617 C CACAT 12365 PASS INDEL;BAVGPOST=0.986;BRSQ=0.911;LDAF=0.0643;AVGPOST=0.9959;RSQ=0.9761;ERATE=0.0005;THETA=0.0002;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 24850061 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0059;AVGPOST=0.9982;RSQ=0.8738;ERATE=0.0004;THETA=0.0012;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 24850127 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.962;BRSQ=0.765;LDAF=0.1016;AVGPOST=0.9445;RSQ=0.7737;ERATE=0.0059;THETA=0.0007;AC=204;AN=2184 GT:DS:GL:BD 0.09340660 0
1 24850129 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.838;LDAF=0.1109;AVGPOST=0.9695;RSQ=0.8990;ERATE=0.0007;THETA=0.0006;AC=239;AN=2184 GT:DS:GL:BD 0.10943224 0
1 24850131 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.929;BRSQ=0.726;LDAF=0.1712;AVGPOST=0.8935;RSQ=0.7222;ERATE=0.0213;THETA=0.0007;AC=319;AN=2184 GT:DS:GL:BD 0.14606227 0
1 24850195 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.933;LDAF=0.0664;AVGPOST=0.9974;RSQ=0.9877;ERATE=0.0006;THETA=0.0004;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 24850201 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.679;LDAF=0.0033;AVGPOST=0.9980;RSQ=0.7304;ERATE=0.0007;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24850363 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0121;AVGPOST=0.9992;RSQ=0.9677;ERATE=0.0003;THETA=0.0007;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 24850428 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.719;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9149;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24850497 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.720;LDAF=0.0028;AVGPOST=0.9985;RSQ=0.7618;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24850523 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0021;AVGPOST=0.9982;RSQ=0.6539;ERATE=0.0005;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24850587 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3857;AVGPOST=0.9961;RSQ=0.9935;ERATE=0.0006;THETA=0.0016;AC=842;AN=2184 GT:DS:GL:BD 0.38553113 0
1 24850703 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.1108;AVGPOST=0.9985;RSQ=0.9940;ERATE=0.0003;THETA=0.0004;AC=243;AN=2184 GT:DS:GL:BD 0.11126374 0
1 24850838 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0135;AVGPOST=0.9996;RSQ=0.9864;ERATE=0.0003;THETA=0.0007;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 24850875 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.5133;AVGPOST=0.9955;RSQ=0.9930;ERATE=0.0013;THETA=0.0008;AC=1123;AN=2184 GT:DS:GL:BD 0.51419413 1
1 24850909 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24850925 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.9101;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24850974 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9741;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24851003 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0181;AVGPOST=0.9995;RSQ=0.9879;ERATE=0.0003;THETA=0.0002;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 24851018 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8396;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24851073 . TG T 134 PASS INDEL;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0010;AVGPOST=0.9986;RSQ=0.4147;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24851200 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.852;LDAF=0.0082;AVGPOST=0.9982;RSQ=0.9159;ERATE=0.0004;THETA=0.0009;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 24851231 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1113;AVGPOST=0.9993;RSQ=0.9969;ERATE=0.0003;THETA=0.0005;AC=243;AN=2184 GT:DS:GL:BD 0.11126374 0
1 24851324 . T TG 116 PASS INDEL;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5778;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24851350 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.873;LDAF=0.0086;AVGPOST=0.9944;RSQ=0.7502;ERATE=0.0004;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 24851402 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.682;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5658;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24851435 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5528;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24851488 . A AT 183 PASS INDEL;BAVGPOST=0.987;BRSQ=0.584;LDAF=0.0294;AVGPOST=0.9667;RSQ=0.5394;ERATE=0.0062;THETA=0.0003;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 24851514 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1796;AVGPOST=0.9983;RSQ=0.9955;ERATE=0.0004;THETA=0.0023;AC=393;AN=2184 GT:DS:GL:BD 0.17994505 0
1 24851563 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.813;LDAF=0.0019;AVGPOST=0.9986;RSQ=0.7514;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24851838 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0092;AVGPOST=0.9986;RSQ=0.9481;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 24851900 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4039;AVGPOST=0.9981;RSQ=0.9974;ERATE=0.0004;THETA=0.0006;AC=882;AN=2184 GT:DS:GL:BD 0.40384614 0
1 24851938 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9525;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24851938 . T TG 41 PASS INDEL;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0022;AVGPOST=0.9990;RSQ=0.8359;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24851939 . G GT 712 PASS INDEL;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.8038;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24851959 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0678;AVGPOST=0.9997;RSQ=0.9980;ERATE=0.0003;THETA=0.0004;AC=148;AN=2184 GT:DS:GL:BD 0.06776557 0
1 24851960 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5974;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24852066 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0045;AVGPOST=0.9974;RSQ=0.7959;ERATE=0.0004;THETA=0.0024;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24852166 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=0.9998;RSQ=0.9435;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24852211 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0677;AVGPOST=0.9989;RSQ=0.9957;ERATE=0.0003;THETA=0.0004;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 24852337 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5189;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24852399 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8018;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24852429 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5181;AVGPOST=0.9983;RSQ=0.9974;ERATE=0.0003;THETA=0.0003;AC=1132;AN=2184 GT:DS:GL:BD 0.51831502 1
1 24852432 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5173;AVGPOST=0.9983;RSQ=0.9975;ERATE=0.0003;THETA=0.0004;AC=1131;AN=2184 GT:DS:GL:BD 0.51785713 1
1 24852438 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0673;AVGPOST=0.9996;RSQ=0.9978;ERATE=0.0003;THETA=0.0004;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 24852463 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.9060;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24852548 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5181;AVGPOST=0.9977;RSQ=0.9967;ERATE=0.0004;THETA=0.0003;AC=1131;AN=2184 GT:DS:GL:BD 0.51785713 1
1 24852572 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24852707 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24852720 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0038;AVGPOST=0.9995;RSQ=0.9382;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 24852726 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.984;LDAF=0.0679;AVGPOST=0.9984;RSQ=0.9908;ERATE=0.0005;THETA=0.0006;AC=148;AN=2184 GT:DS:GL:BD 0.06776557 0
1 24852794 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8200;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24852853 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.481;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8247;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24852917 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5186;AVGPOST=0.9986;RSQ=0.9979;ERATE=0.0003;THETA=0.0005;AC=1132;AN=2184 GT:DS:GL:BD 0.51831502 1
1 24852977 rs68021635 G GA 9202 PASS INDEL;BAVGPOST=0.989;BRSQ=0.939;LDAF=0.0775;AVGPOST=0.9791;RSQ=0.9114;ERATE=0.0051;THETA=0.0003;AC=157;AN=2184 GT:DS:GL:BD 0.07188645 0
1 24852994 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4065;AVGPOST=0.9989;RSQ=0.9981;ERATE=0.0004;THETA=0.0004;AC=887;AN=2184 GT:DS:GL:BD 0.40613553 0
1 24853058 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.8120;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24853080 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0134;AVGPOST=0.9998;RSQ=0.9924;ERATE=0.0003;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 24853290 . TA T 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.684;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4179;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24853354 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0033;AVGPOST=0.9972;RSQ=0.6899;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24853526 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9991;RSQ=0.8666;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24853570 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24853583 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.847;LDAF=0.0100;AVGPOST=0.9993;RSQ=0.9668;ERATE=0.0003;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 24853701 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.936;LDAF=0.0124;AVGPOST=0.9985;RSQ=0.9541;ERATE=0.0003;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 24853782 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.678;LDAF=0.0027;AVGPOST=0.9980;RSQ=0.7359;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24853879 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6947;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24854022 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.5195;AVGPOST=0.9959;RSQ=0.9936;ERATE=0.0007;THETA=0.0003;AC=1134;AN=2184 GT:DS:GL:BD 0.51923078 1
1 24854167 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5182;AVGPOST=0.9990;RSQ=0.9982;ERATE=0.0005;THETA=0.0003;AC=1132;AN=2184 GT:DS:GL:BD 0.51831502 1
1 24854396 rs10713503 AT A 6055 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0684;AVGPOST=0.9971;RSQ=0.9834;ERATE=0.0006;THETA=0.0002;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 24854406 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0030;AVGPOST=0.9979;RSQ=0.7165;ERATE=0.0005;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24854540 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0022;AVGPOST=0.9989;RSQ=0.7701;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24854549 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6521;AVGPOST=0.9963;RSQ=0.9942;ERATE=0.0005;THETA=0.0031;AC=1424;AN=2184 GT:DS:GL:BD 0.65201467 1
1 24854751 rs34143087 AAAAAAAG A 7500 PASS INDEL;BAVGPOST=0.954;BRSQ=0.730;LDAF=0.1070;AVGPOST=0.9272;RSQ=0.7005;ERATE=0.0201;THETA=0.0003;AC=189;AN=2184 GT:DS:GL:BD 0.08653846 0
1 24854925 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.1109;AVGPOST=0.9974;RSQ=0.9905;ERATE=0.0004;THETA=0.0004;AC=241;AN=2184 GT:DS:GL:BD 0.11034799 0
1 24855099 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7200;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24855193 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5177;AVGPOST=0.9990;RSQ=0.9983;ERATE=0.0004;THETA=0.0004;AC=1131;AN=2184 GT:DS:GL:BD 0.51785713 1
1 24855340 . C CTGAA 344 PASS INDEL;BAVGPOST=0.998;BRSQ=0.747;LDAF=0.0036;AVGPOST=0.9991;RSQ=0.8827;ERATE=0.0005;THETA=0.0012;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24855352 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0297;AVGPOST=0.9995;RSQ=0.9930;ERATE=0.0003;THETA=0.0005;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 24855441 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0672;AVGPOST=0.9999;RSQ=0.9994;ERATE=0.0003;THETA=0.0005;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 24855600 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5128;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24855643 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.844;LDAF=0.0087;AVGPOST=0.9976;RSQ=0.8875;ERATE=0.0004;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 24855676 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0130;AVGPOST=0.9996;RSQ=0.9859;ERATE=0.0003;THETA=0.0006;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 24855821 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.5772;AVGPOST=0.9848;RSQ=0.9757;ERATE=0.0034;THETA=0.0004;AC=1268;AN=2184 GT:DS:GL:BD 0.58058608 1
1 24855841 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5804;AVGPOST=0.9938;RSQ=0.9903;ERATE=0.0007;THETA=0.0004;AC=1270;AN=2184 GT:DS:GL:BD 0.58150184 1
1 24856349 . T TA 104 PASS INDEL;BAVGPOST=0.998;BRSQ=0.505;LDAF=0.0029;AVGPOST=0.9983;RSQ=0.7470;ERATE=0.0006;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24856420 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.981;LDAF=0.5737;AVGPOST=0.9626;RSQ=0.9444;ERATE=0.0083;THETA=0.0003;AC=1260;AN=2184 GT:DS:GL:BD 0.57692307 1
1 24856488 . C CA 1628 PASS INDEL;BAVGPOST=0.744;BRSQ=0.372;LDAF=0.2747;AVGPOST=0.7422;RSQ=0.4912;ERATE=0.0387;THETA=0.0005;AC=459;AN=2184 GT:DS:GL:BD 0.21016483 0
1 24856499 rs11340138 AC A 31998 PASS INDEL;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.5800;AVGPOST=0.9904;RSQ=0.9850;ERATE=0.0015;THETA=0.0004;AC=1270;AN=2184 GT:DS:GL:BD 0.58150184 1
1 24856544 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9323;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24856660 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5833;AVGPOST=0.9973;RSQ=0.9957;ERATE=0.0005;THETA=0.0005;AC=1274;AN=2184 GT:DS:GL:BD 0.58333331 1
1 24856831 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0032;AVGPOST=0.9984;RSQ=0.7918;ERATE=0.0005;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24856903 . G GGA 33 PASS INDEL;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6061;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24856914 . TAAGCAAAAA T 4694 PASS INDEL;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0129;AVGPOST=0.9997;RSQ=0.9897;ERATE=0.0003;THETA=0.0014;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 24856971 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.733;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24857054 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.962;LDAF=0.0126;AVGPOST=0.9991;RSQ=0.9784;ERATE=0.0003;THETA=0.0008;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 24857073 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24857085 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.943;LDAF=0.0143;AVGPOST=0.9977;RSQ=0.9445;ERATE=0.0004;THETA=0.0007;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 24857086 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4038;AVGPOST=0.9959;RSQ=0.9942;ERATE=0.0006;THETA=0.0004;AC=883;AN=2184 GT:DS:GL:BD 0.40430403 0
1 24857357 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.687;LDAF=0.0037;AVGPOST=0.9983;RSQ=0.7967;ERATE=0.0005;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24857503 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.5817;AVGPOST=0.9920;RSQ=0.9880;ERATE=0.0016;THETA=0.0004;AC=1270;AN=2184 GT:DS:GL:BD 0.58150184 1
1 24857664 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24857764 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24857897 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0018;AVGPOST=0.9998;RSQ=0.9536;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24857960 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24858081 . A AC 10550 PASS INDEL;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0675;AVGPOST=0.9995;RSQ=0.9969;ERATE=0.0003;THETA=0.0005;AC=148;AN=2184 GT:DS:GL:BD 0.06776557 0
1 24858082 . G GT 11307 PASS INDEL;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0670;AVGPOST=0.9982;RSQ=0.9892;ERATE=0.0004;THETA=0.0013;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 24858150 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.731;LDAF=0.0028;AVGPOST=0.9985;RSQ=0.8050;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24858271 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9343;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24858380 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.827;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.6200;ERATE=0.0005;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24858587 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.777;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4217;ERATE=0.0005;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24858611 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7230;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24858714 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.700;LDAF=0.0105;AVGPOST=0.9877;RSQ=0.5853;ERATE=0.0013;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 24858828 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.939;LDAF=0.1449;AVGPOST=0.9887;RSQ=0.9747;ERATE=0.0007;THETA=0.0004;AC=317;AN=2184 GT:DS:GL:BD 0.14514652 0
1 24858864 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.974;LDAF=0.0790;AVGPOST=0.9989;RSQ=0.9941;ERATE=0.0004;THETA=0.0005;AC=172;AN=2184 GT:DS:GL:BD 0.07875458 0
1 24859035 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0788;AVGPOST=0.9996;RSQ=0.9981;ERATE=0.0004;THETA=0.0002;AC=172;AN=2184 GT:DS:GL:BD 0.07875458 0
1 24859213 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.390;LDAF=0.0045;AVGPOST=0.9950;RSQ=0.5439;ERATE=0.0009;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24859254 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0045;AVGPOST=0.9989;RSQ=0.9032;ERATE=0.0004;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 24859324 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.985;LDAF=0.1080;AVGPOST=0.9960;RSQ=0.9842;ERATE=0.0004;THETA=0.0004;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 24859354 . A ATGG 1047 PASS INDEL;BAVGPOST=0.976;BRSQ=0.639;LDAF=0.0270;AVGPOST=0.9871;RSQ=0.8227;ERATE=0.0006;THETA=0.0004;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 24859527 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24859535 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.807;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.6240;ERATE=0.0015;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24859557 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24859562 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0750;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0024;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 24859587 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0041;AVGPOST=1.0000;RSQ=0.9946;ERATE=0.0006;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 24859594 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 24859617 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4099;AVGPOST=0.9999;RSQ=0.9998;ERATE=0.0004;THETA=0.0010;AC=895;AN=2184 GT:DS:GL:BD 0.40979853 0
1 24859665 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4094;AVGPOST=0.9997;RSQ=0.9995;ERATE=0.0003;THETA=0.0011;AC=894;AN=2184 GT:DS:GL:BD 0.40934065 0
1 24859740 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24859764 . CCTA C 1555 PASS INDEL;BAVGPOST=0.994;BRSQ=0.814;LDAF=0.0197;AVGPOST=0.9896;RSQ=0.8094;ERATE=0.0022;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 24859767 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1311;AVGPOST=0.9999;RSQ=0.9997;ERATE=0.0003;THETA=0.0003;AC=287;AN=2184 GT:DS:GL:BD 0.13141026 0
1 24859847 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0201;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0010;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 24859983 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6442;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24860019 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7255;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24860065 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.753;LDAF=0.0030;AVGPOST=0.9953;RSQ=0.4063;ERATE=0.0008;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24860174 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.5551;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24860222 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0769;AVGPOST=0.9968;RSQ=0.9870;ERATE=0.0004;THETA=0.0012;AC=167;AN=2184 GT:DS:GL:BD 0.07646520 0
1 24860227 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0253;AVGPOST=0.9980;RSQ=0.9680;ERATE=0.0004;THETA=0.0008;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 24860343 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0751;AVGPOST=0.9997;RSQ=0.9982;ERATE=0.0003;THETA=0.0010;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 24860455 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0024;AVGPOST=0.9986;RSQ=0.7563;ERATE=0.0010;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24860468 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0751;AVGPOST=0.9982;RSQ=0.9924;ERATE=0.0004;THETA=0.0006;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 24860477 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24860567 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7102;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24860590 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0755;AVGPOST=0.9984;RSQ=0.9933;ERATE=0.0003;THETA=0.0008;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 24860602 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0069;AVGPOST=0.9976;RSQ=0.8512;ERATE=0.0004;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 24860817 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4088;AVGPOST=0.9976;RSQ=0.9959;ERATE=0.0005;THETA=0.0008;AC=892;AN=2184 GT:DS:GL:BD 0.40842491 0
1 24860890 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6295;ERATE=0.0004;THETA=0.0043;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24860895 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4187;ERATE=0.0006;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24860946 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5797;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24861049 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.955;LDAF=0.0647;AVGPOST=0.9979;RSQ=0.9864;ERATE=0.0005;THETA=0.0010;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 24861073 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0365;AVGPOST=0.9940;RSQ=0.9436;ERATE=0.0005;THETA=0.0004;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 24861105 rs55684532 G GA 5025 PASS INDEL;BAVGPOST=0.945;BRSQ=0.776;LDAF=0.1514;AVGPOST=0.8943;RSQ=0.6806;ERATE=0.0289;THETA=0.0005;AC=264;AN=2184 GT:DS:GL:BD 0.12087912 0
1 24861128 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0753;AVGPOST=0.9987;RSQ=0.9933;ERATE=0.0003;THETA=0.0004;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 24861287 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0752;AVGPOST=0.9992;RSQ=0.9960;ERATE=0.0003;THETA=0.0004;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 24861297 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0316;AVGPOST=0.9998;RSQ=0.9975;ERATE=0.0003;THETA=0.0006;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 24861301 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.965;LDAF=0.0393;AVGPOST=0.9934;RSQ=0.9354;ERATE=0.0004;THETA=0.0005;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 24861335 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0347;AVGPOST=0.9993;RSQ=0.9921;ERATE=0.0003;THETA=0.0009;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 24861373 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0760;AVGPOST=0.9998;RSQ=0.9987;ERATE=0.0003;THETA=0.0004;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 24861399 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0754;AVGPOST=0.9990;RSQ=0.9962;ERATE=0.0003;THETA=0.0007;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 24861422 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9571;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24861448 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0759;AVGPOST=0.9999;RSQ=0.9995;ERATE=0.0003;THETA=0.0004;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 24861467 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.8291;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24861471 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0755;AVGPOST=0.9997;RSQ=0.9986;ERATE=0.0003;THETA=0.0003;AC=165;AN=2184 GT:DS:GL:BD 0.07554945 0
1 24861615 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24861638 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24861697 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24861704 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5225;AVGPOST=0.9997;RSQ=0.9995;ERATE=0.0004;THETA=0.0060;AC=1141;AN=2184 GT:DS:GL:BD 0.52243590 1
1 24861709 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24861748 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0228;AVGPOST=1.0000;RSQ=0.9991;ERATE=0.0003;THETA=0.0010;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 24861781 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=0.9999;RSQ=0.9894;ERATE=0.0003;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 24861799 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24861835 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24861994 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7877;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24862116 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8540;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24862174 . A AT 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.776;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4628;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24862293 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0003;AVGPOST=0.9994;RSQ=0.3710;ERATE=0.0003;THETA=0.0007;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 24862328 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5450;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24862407 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0022;AVGPOST=0.9995;RSQ=0.9067;ERATE=0.0004;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24862465 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.949;LDAF=0.0133;AVGPOST=0.9988;RSQ=0.9606;ERATE=0.0004;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 24862476 . TGCCCA T 439 PASS INDEL;BAVGPOST=0.997;BRSQ=0.850;LDAF=0.0078;AVGPOST=0.9964;RSQ=0.8318;ERATE=0.0004;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 24862486 . GGA G 158 PASS INDEL;BAVGPOST=0.996;BRSQ=0.832;LDAF=0.0080;AVGPOST=0.9974;RSQ=0.8676;ERATE=0.0005;THETA=0.0029;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 24862489 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.817;LDAF=0.0125;AVGPOST=0.9963;RSQ=0.8901;ERATE=0.0005;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 24862643 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.5991;AVGPOST=0.9981;RSQ=0.9967;ERATE=0.0003;THETA=0.0003;AC=1310;AN=2184 GT:DS:GL:BD 0.59981686 1
1 24862649 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.6001;AVGPOST=0.9978;RSQ=0.9961;ERATE=0.0003;THETA=0.0004;AC=1312;AN=2184 GT:DS:GL:BD 0.60073262 1
1 24862665 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24862749 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0760;AVGPOST=0.9998;RSQ=0.9987;ERATE=0.0003;THETA=0.0004;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 24862833 . AG A 62 PASS INDEL;BAVGPOST=0.988;BRSQ=0.067;LDAF=0.1325;AVGPOST=0.8104;RSQ=0.3741;ERATE=0.0049;THETA=0.0045;AC=157;AN=2184 GT:DS:GL:BD 0.07188645 0
1 24862835 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6347;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24862873 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8700;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24863120 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8101;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24863285 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1110;AVGPOST=0.9969;RSQ=0.9888;ERATE=0.0003;THETA=0.0006;AC=242;AN=2184 GT:DS:GL:BD 0.11080586 0
1 24863341 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0775;AVGPOST=0.9991;RSQ=0.9950;ERATE=0.0004;THETA=0.0006;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 24863448 . GATC G 1470 PASS INDEL;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0111;AVGPOST=0.9996;RSQ=0.9821;ERATE=0.0004;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 24863478 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0759;AVGPOST=0.9997;RSQ=0.9984;ERATE=0.0004;THETA=0.0006;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 24863530 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0760;AVGPOST=0.9995;RSQ=0.9974;ERATE=0.0004;THETA=0.0007;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 24863760 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.622;LDAF=0.0081;AVGPOST=0.9944;RSQ=0.7237;ERATE=0.0011;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 24864008 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.4113;AVGPOST=0.9951;RSQ=0.9922;ERATE=0.0011;THETA=0.0003;AC=897;AN=2184 GT:DS:GL:BD 0.41071430 0
1 24864023 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7436;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24864105 . AG A 14958 PASS INDEL;BAVGPOST=0.983;BRSQ=0.436;LDAF=0.9729;AVGPOST=0.9665;RSQ=0.5024;ERATE=0.0071;THETA=0.0004;AC=2144;AN=2184 GT:DS:GL:BD 0.98168498 1
1 24864107 rs5773092 GA G 96077 PASS INDEL;BAVGPOST=1.000;BRSQ=0;LDAF=0.9995;AVGPOST=0.9989;RSQ=0.0907;ERATE=0.0004;THETA=0.0003;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 24864145 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0050;AVGPOST=0.9979;RSQ=0.8589;ERATE=0.0005;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 24864228 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0380;AVGPOST=0.9997;RSQ=0.9968;ERATE=0.0003;THETA=0.0005;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 24864280 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1025;AVGPOST=0.9989;RSQ=0.9962;ERATE=0.0004;THETA=0.0004;AC=223;AN=2184 GT:DS:GL:BD 0.10210623 0
1 24864313 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5420;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24864351 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.986;LDAF=0.1016;AVGPOST=0.9940;RSQ=0.9791;ERATE=0.0006;THETA=0.0005;AC=225;AN=2184 GT:DS:GL:BD 0.10302198 0
1 24864395 rs112195387 AAAAAG A 5018 PASS INDEL;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0272;AVGPOST=0.9996;RSQ=0.9935;ERATE=0.0004;THETA=0.0004;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 24864399 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6243;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24864567 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24864576 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1138;AVGPOST=0.9992;RSQ=0.9972;ERATE=0.0004;THETA=0.0003;AC=248;AN=2184 GT:DS:GL:BD 0.11355311 0
1 24864789 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1037;AVGPOST=0.9984;RSQ=0.9945;ERATE=0.0005;THETA=0.0003;AC=227;AN=2184 GT:DS:GL:BD 0.10393773 0
1 24864800 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24864947 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.892;LDAF=0.1205;AVGPOST=0.9531;RSQ=0.8552;ERATE=0.0078;THETA=0.0003;AC=238;AN=2184 GT:DS:GL:BD 0.10897436 0
1 24865040 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.940;BRSQ=0.888;LDAF=0.4082;AVGPOST=0.9445;RSQ=0.9165;ERATE=0.0051;THETA=0.0006;AC=896;AN=2184 GT:DS:GL:BD 0.41025642 0
1 24865052 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.757;LDAF=0.0670;AVGPOST=0.9832;RSQ=0.9053;ERATE=0.0011;THETA=0.0002;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 24865339 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6553;ERATE=0.0004;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24865421 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.455;LDAF=0.0034;AVGPOST=0.9960;RSQ=0.4732;ERATE=0.0011;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24865474 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0636;AVGPOST=0.9989;RSQ=0.9940;ERATE=0.0003;THETA=0.0028;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 24865549 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0645;AVGPOST=0.9997;RSQ=0.9979;ERATE=0.0003;THETA=0.0007;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 24865558 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24865888 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5560;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24866122 . CCTATTCAAGG C 581 PASS INDEL;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24866247 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8524;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24866348 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24866637 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0509;AVGPOST=0.9996;RSQ=0.9967;ERATE=0.0004;THETA=0.0002;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 24866793 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0023;AVGPOST=0.9997;RSQ=0.9458;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24866805 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0360;AVGPOST=0.9997;RSQ=0.9960;ERATE=0.0003;THETA=0.0002;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 24866907 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0643;AVGPOST=0.9995;RSQ=0.9968;ERATE=0.0003;THETA=0.0035;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 24866924 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24866937 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0069;AVGPOST=0.9990;RSQ=0.9503;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 24867038 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7596;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24867063 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0511;AVGPOST=0.9997;RSQ=0.9975;ERATE=0.0003;THETA=0.0004;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 24867276 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24867374 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9525;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24867376 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.658;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5041;ERATE=0.0005;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24867444 . A AT 43 PASS INDEL;BAVGPOST=0.992;BRSQ=0.416;LDAF=0.0155;AVGPOST=0.9833;RSQ=0.5785;ERATE=0.0031;THETA=0.0010;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 24867540 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1036;AVGPOST=0.9991;RSQ=0.9965;ERATE=0.0004;THETA=0.0005;AC=226;AN=2184 GT:DS:GL:BD 0.10347985 0
1 24867599 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.770;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8395;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24867634 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24867734 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5000;AVGPOST=0.9976;RSQ=0.9962;ERATE=0.0004;THETA=0.0003;AC=1092;AN=2184 GT:DS:GL:BD 0.50000000 0
1 24867781 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.6647;AVGPOST=0.9969;RSQ=0.9945;ERATE=0.0006;THETA=0.0005;AC=1452;AN=2184 GT:DS:GL:BD 0.66483516 1
1 24867804 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1294;AVGPOST=0.9965;RSQ=0.9913;ERATE=0.0005;THETA=0.0003;AC=282;AN=2184 GT:DS:GL:BD 0.12912089 0
1 24867820 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0019;AVGPOST=0.9991;RSQ=0.8041;ERATE=0.0004;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24868003 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.6634;AVGPOST=0.9978;RSQ=0.9963;ERATE=0.0006;THETA=0.0005;AC=1450;AN=2184 GT:DS:GL:BD 0.66391939 1
1 24868045 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4103;AVGPOST=0.9973;RSQ=0.9955;ERATE=0.0004;THETA=0.0003;AC=897;AN=2184 GT:DS:GL:BD 0.41071430 0
1 24868171 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8869;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24868211 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9321;ERATE=0.0005;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24868312 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0118;AVGPOST=0.9994;RSQ=0.9826;ERATE=0.0003;THETA=0.0007;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 24868398 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0651;AVGPOST=0.9996;RSQ=0.9980;ERATE=0.0003;THETA=0.0004;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 24868428 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0121;AVGPOST=0.9996;RSQ=0.9863;ERATE=0.0004;THETA=0.0009;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 24868429 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8250;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24868592 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.986;LDAF=0.1043;AVGPOST=0.9944;RSQ=0.9812;ERATE=0.0010;THETA=0.0005;AC=228;AN=2184 GT:DS:GL:BD 0.10439561 0
1 24868646 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0088;AVGPOST=0.9989;RSQ=0.9458;ERATE=0.0004;THETA=0.0012;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 24868663 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5763;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24868710 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9124;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24868823 . CACAA C 1362 PASS INDEL;BAVGPOST=0.995;BRSQ=0.792;LDAF=0.0127;AVGPOST=0.9941;RSQ=0.8035;ERATE=0.0010;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 24868827 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.851;LDAF=0.0133;AVGPOST=0.9944;RSQ=0.8456;ERATE=0.0004;THETA=0.0009;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 24868880 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0661;AVGPOST=0.9977;RSQ=0.9889;ERATE=0.0005;THETA=0.0003;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 24868896 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.777;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.5963;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24868918 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0293;AVGPOST=0.9957;RSQ=0.9363;ERATE=0.0004;THETA=0.0004;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 24868949 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.704;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6997;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24869079 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.705;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5140;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24869141 . T TG 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6620;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24869181 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8871;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24869237 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0359;AVGPOST=0.9996;RSQ=0.9945;ERATE=0.0003;THETA=0.0006;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 24869242 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24869319 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0270;AVGPOST=0.9998;RSQ=0.9964;ERATE=0.0003;THETA=0.0003;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 24869369 rs11344061 GA G 104472 PASS INDEL;BAVGPOST=1.000;BRSQ=0;LDAF=0.9991;AVGPOST=0.9995;RSQ=0.7593;ERATE=0.0003;THETA=0.0005;AC=2182;AN=2184 GT:DS:GL:BD 0.99908423 1
1 24869622 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6237;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24869642 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6526;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24869754 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6208;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24869837 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0384;AVGPOST=0.9999;RSQ=0.9990;ERATE=0.0003;THETA=0.0002;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 24869838 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6487;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24869886 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.963;LDAF=0.6497;AVGPOST=0.9563;RSQ=0.9339;ERATE=0.0070;THETA=0.0002;AC=1440;AN=2184 GT:DS:GL:BD 0.65934068 1
1 24869925 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.550;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.3686;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24869975 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.717;LDAF=0.0019;AVGPOST=0.9973;RSQ=0.4538;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24869979 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0118;AVGPOST=0.9993;RSQ=0.9721;ERATE=0.0004;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 24870003 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.978;LDAF=0.0511;AVGPOST=0.9976;RSQ=0.9811;ERATE=0.0005;THETA=0.0003;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 24870005 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.988;LDAF=0.1159;AVGPOST=0.9982;RSQ=0.9946;ERATE=0.0004;THETA=0.0005;AC=252;AN=2184 GT:DS:GL:BD 0.11538462 0
1 24870016 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.659;LDAF=0.0099;AVGPOST=0.9902;RSQ=0.6041;ERATE=0.0013;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 24870106 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0295;AVGPOST=0.9957;RSQ=0.9495;ERATE=0.0004;THETA=0.0005;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 24870134 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0324;AVGPOST=0.9936;RSQ=0.9303;ERATE=0.0008;THETA=0.0004;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 24870192 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.695;LDAF=0.0034;AVGPOST=0.9956;RSQ=0.5158;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24870214 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.688;LDAF=0.0035;AVGPOST=0.9964;RSQ=0.5546;ERATE=0.0007;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24870236 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0056;AVGPOST=0.9974;RSQ=0.7971;ERATE=0.0005;THETA=0.0020;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 24870257 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0138;AVGPOST=0.9988;RSQ=0.9620;ERATE=0.0003;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 24870270 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.458;LDAF=0.0042;AVGPOST=0.9942;RSQ=0.4018;ERATE=0.0013;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24870343 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.986;LDAF=0.1168;AVGPOST=0.9936;RSQ=0.9721;ERATE=0.0009;THETA=0.0004;AC=254;AN=2184 GT:DS:GL:BD 0.11630037 0
1 24870344 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0029;AVGPOST=0.9979;RSQ=0.6713;ERATE=0.0005;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24870353 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.628;LDAF=0.0190;AVGPOST=0.9833;RSQ=0.6350;ERATE=0.0045;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 24870388 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.605;LDAF=0.0189;AVGPOST=0.9820;RSQ=0.6103;ERATE=0.0035;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 24870404 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.596;LDAF=0.0146;AVGPOST=0.9870;RSQ=0.6673;ERATE=0.0013;THETA=0.0006;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 24870491 . GAAAGT G 46 PASS INDEL;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8082;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24870536 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.898;LDAF=0.0068;AVGPOST=0.9988;RSQ=0.9215;ERATE=0.0005;THETA=0.0010;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 24870719 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7545;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24871002 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.980;LDAF=0.0584;AVGPOST=0.9951;RSQ=0.9759;ERATE=0.0003;THETA=0.0018;AC=129;AN=2184 GT:DS:GL:BD 0.05906593 0
1 24871003 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.980;LDAF=0.0585;AVGPOST=0.9953;RSQ=0.9773;ERATE=0.0003;THETA=0.0003;AC=129;AN=2184 GT:DS:GL:BD 0.05906593 0
1 24871105 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0018;AVGPOST=0.9994;RSQ=0.8683;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24871137 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0020;AVGPOST=0.9992;RSQ=0.8336;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24871178 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0110;AVGPOST=0.9999;RSQ=0.9942;ERATE=0.0003;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 24871356 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0008;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24871454 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0038;AVGPOST=0.9979;RSQ=0.7979;ERATE=0.0020;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24871576 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.709;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24871586 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4591;AVGPOST=0.9987;RSQ=0.9981;ERATE=0.0004;THETA=0.0004;AC=1002;AN=2184 GT:DS:GL:BD 0.45879120 0
1 24871730 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4722;AVGPOST=0.9960;RSQ=0.9940;ERATE=0.0005;THETA=0.0005;AC=1031;AN=2184 GT:DS:GL:BD 0.47206959 0
1 24871859 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0022;AVGPOST=0.9974;RSQ=0.6039;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24871896 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1006;AVGPOST=0.9993;RSQ=0.9972;ERATE=0.0003;THETA=0.0008;AC=220;AN=2184 GT:DS:GL:BD 0.10073260 0
1 24871920 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7976;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24871987 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24871993 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4122;AVGPOST=0.9955;RSQ=0.9932;ERATE=0.0012;THETA=0.0005;AC=900;AN=2184 GT:DS:GL:BD 0.41208792 0
1 24872178 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.7171;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24872310 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0045;AVGPOST=0.9995;RSQ=0.9521;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 24872463 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0117;AVGPOST=0.9994;RSQ=0.9793;ERATE=0.0003;THETA=0.0002;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 24872544 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5511;AVGPOST=0.9992;RSQ=0.9987;ERATE=0.0003;THETA=0.0007;AC=1204;AN=2184 GT:DS:GL:BD 0.55128205 1
1 24872744 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.946;LDAF=0.0325;AVGPOST=0.9984;RSQ=0.9787;ERATE=0.0003;THETA=0.0019;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 24872890 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8262;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24872913 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0041;AVGPOST=0.9997;RSQ=0.9703;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 24872993 rs35470314 GA G 34892 PASS INDEL;BAVGPOST=0.985;BRSQ=0.979;LDAF=0.5143;AVGPOST=0.9664;RSQ=0.9518;ERATE=0.0090;THETA=0.0003;AC=1127;AN=2184 GT:DS:GL:BD 0.51602566 1
1 24873036 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.0031;AVGPOST=0.9983;RSQ=0.7631;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24873042 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.971;LDAF=0.0291;AVGPOST=0.9987;RSQ=0.9834;ERATE=0.0003;THETA=0.0013;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 24873153 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5492;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24873162 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.779;LDAF=0.0037;AVGPOST=0.9971;RSQ=0.7154;ERATE=0.0004;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24873176 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.6641;AVGPOST=0.9971;RSQ=0.9950;ERATE=0.0005;THETA=0.0035;AC=1451;AN=2184 GT:DS:GL:BD 0.66437727 1
1 24873335 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0115;AVGPOST=0.9989;RSQ=0.9563;ERATE=0.0004;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 24873410 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.948;LDAF=0.0259;AVGPOST=0.9947;RSQ=0.9095;ERATE=0.0007;THETA=0.0015;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 24873673 . T TTGG 2839 PASS INDEL;BAVGPOST=0.923;BRSQ=0.667;LDAF=0.1449;AVGPOST=0.9064;RSQ=0.7099;ERATE=0.0067;THETA=0.0013;AC=260;AN=2184 GT:DS:GL:BD 0.11904762 0
1 24873675 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.864;LDAF=0.0251;AVGPOST=0.9946;RSQ=0.9079;ERATE=0.0008;THETA=0.0100;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 24873837 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.842;LDAF=0.0094;AVGPOST=0.9970;RSQ=0.8725;ERATE=0.0005;THETA=0.0108;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 24873860 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.987;LDAF=0.2405;AVGPOST=0.9894;RSQ=0.9788;ERATE=0.0006;THETA=0.0124;AC=522;AN=2184 GT:DS:GL:BD 0.23901099 0
1 24873992 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0301;AVGPOST=0.9968;RSQ=0.9542;ERATE=0.0003;THETA=0.0070;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 24874291 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.881;LDAF=0.0097;AVGPOST=0.9973;RSQ=0.9011;ERATE=0.0006;THETA=0.0015;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 24874339 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0136;AVGPOST=0.9991;RSQ=0.9756;ERATE=0.0003;THETA=0.0106;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 24874496 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0334;AVGPOST=0.9992;RSQ=0.9904;ERATE=0.0004;THETA=0.0041;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 24874674 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.2449;AVGPOST=0.9964;RSQ=0.9931;ERATE=0.0004;THETA=0.0005;AC=533;AN=2184 GT:DS:GL:BD 0.24404761 0
1 24874735 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1688;AVGPOST=0.9987;RSQ=0.9959;ERATE=0.0004;THETA=0.0023;AC=368;AN=2184 GT:DS:GL:BD 0.16849817 0
1 24874767 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0108;AVGPOST=0.9995;RSQ=0.9856;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 24874809 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0149;AVGPOST=0.9983;RSQ=0.9545;ERATE=0.0003;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 24875009 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.986;LDAF=0.1679;AVGPOST=0.9992;RSQ=0.9973;ERATE=0.0004;THETA=0.0006;AC=367;AN=2184 GT:DS:GL:BD 0.16804029 0
1 24875031 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.790;LDAF=0.0224;AVGPOST=0.9886;RSQ=0.8121;ERATE=0.0005;THETA=0.0002;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 24875315 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.919;LDAF=0.0148;AVGPOST=0.9952;RSQ=0.8711;ERATE=0.0006;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 24875334 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.877;LDAF=0.0022;AVGPOST=0.9991;RSQ=0.8145;ERATE=0.0004;THETA=0.0026;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24875454 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9612;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24875477 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.934;LDAF=0.0226;AVGPOST=0.9959;RSQ=0.9329;ERATE=0.0005;THETA=0.0008;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 24875490 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3348;AVGPOST=0.9973;RSQ=0.9955;ERATE=0.0004;THETA=0.0009;AC=731;AN=2184 GT:DS:GL:BD 0.33470696 0
1 24875795 . TTTTG T 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6542;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24875866 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.5619;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24875888 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0219;AVGPOST=0.9991;RSQ=0.9813;ERATE=0.0003;THETA=0.0006;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 24876074 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.1633;AVGPOST=0.9973;RSQ=0.9934;ERATE=0.0003;THETA=0.0003;AC=355;AN=2184 GT:DS:GL:BD 0.16254579 0
1 24876279 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24876307 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8967;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24876353 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24876380 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0338;AVGPOST=0.9996;RSQ=0.9954;ERATE=0.0003;THETA=0.0005;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 24876383 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1676;AVGPOST=0.9992;RSQ=0.9974;ERATE=0.0003;THETA=0.0005;AC=366;AN=2184 GT:DS:GL:BD 0.16758242 0
1 24876536 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0120;AVGPOST=0.9998;RSQ=0.9926;ERATE=0.0003;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 24876623 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0037;AVGPOST=0.9996;RSQ=0.9546;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 24876641 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.7360;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24876700 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24876739 . AT A 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.765;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4665;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24876782 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0079;AVGPOST=0.9992;RSQ=0.9556;ERATE=0.0003;THETA=0.0012;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 24876830 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24876831 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0338;AVGPOST=0.9995;RSQ=0.9940;ERATE=0.0003;THETA=0.0002;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 24876855 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.846;LDAF=0.0053;AVGPOST=0.9985;RSQ=0.8787;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 24876856 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24876867 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5687;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24876870 . TG T 385 PASS INDEL;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0046;AVGPOST=0.9988;RSQ=0.8879;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 24877014 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4655;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24877022 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0022;AVGPOST=0.9987;RSQ=0.7899;ERATE=0.0004;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24877099 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1731;AVGPOST=0.9989;RSQ=0.9970;ERATE=0.0005;THETA=0.0003;AC=379;AN=2184 GT:DS:GL:BD 0.17353480 0
1 24877113 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.728;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6554;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24877117 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.794;LDAF=0.0076;AVGPOST=0.9952;RSQ=0.7575;ERATE=0.0005;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 24877140 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24877151 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1719;AVGPOST=0.9984;RSQ=0.9952;ERATE=0.0005;THETA=0.0004;AC=376;AN=2184 GT:DS:GL:BD 0.17216118 0
1 24877213 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.989;LDAF=0.2569;AVGPOST=0.9868;RSQ=0.9758;ERATE=0.0007;THETA=0.0004;AC=560;AN=2184 GT:DS:GL:BD 0.25641027 0
1 24877252 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.981;LDAF=0.2431;AVGPOST=0.9888;RSQ=0.9792;ERATE=0.0004;THETA=0.0006;AC=532;AN=2184 GT:DS:GL:BD 0.24358974 0
1 24877315 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0347;AVGPOST=0.9983;RSQ=0.9827;ERATE=0.0003;THETA=0.0009;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 24877348 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0044;AVGPOST=0.9993;RSQ=0.9406;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 24877361 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.763;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.4829;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24877404 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0021;AVGPOST=0.9990;RSQ=0.8068;ERATE=0.0003;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24877458 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.1757;AVGPOST=0.9991;RSQ=0.9973;ERATE=0.0004;THETA=0.0012;AC=385;AN=2184 GT:DS:GL:BD 0.17628205 0
1 24877639 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0004;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24877744 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7901;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24877754 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.526;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24877894 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1757;AVGPOST=0.9985;RSQ=0.9963;ERATE=0.0003;THETA=0.0003;AC=385;AN=2184 GT:DS:GL:BD 0.17628205 0
1 24877903 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9203;ERATE=0.0003;THETA=0.0026;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24877905 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1756;AVGPOST=0.9985;RSQ=0.9962;ERATE=0.0005;THETA=0.0010;AC=385;AN=2184 GT:DS:GL:BD 0.17628205 0
1 24878075 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0070;AVGPOST=0.9997;RSQ=0.9831;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 24878105 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1758;AVGPOST=0.9986;RSQ=0.9964;ERATE=0.0004;THETA=0.0006;AC=385;AN=2184 GT:DS:GL:BD 0.17628205 0
1 24878204 . CTTAAA C 1203 PASS INDEL;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0107;AVGPOST=0.9992;RSQ=0.9643;ERATE=0.0004;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 24878252 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.837;LDAF=0.0030;AVGPOST=0.9996;RSQ=0.9565;ERATE=0.0003;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24878277 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0058;AVGPOST=0.9993;RSQ=0.9498;ERATE=0.0004;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 24878313 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24878349 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24878403 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0106;AVGPOST=0.9993;RSQ=0.9718;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 24878451 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0135;AVGPOST=0.9994;RSQ=0.9790;ERATE=0.0004;THETA=0.0030;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 24878468 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24878491 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1773;AVGPOST=0.9993;RSQ=0.9979;ERATE=0.0004;THETA=0.0004;AC=388;AN=2184 GT:DS:GL:BD 0.17765568 0
1 24878496 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0045;AVGPOST=0.9993;RSQ=0.9367;ERATE=0.0004;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 24878575 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0042;AVGPOST=0.9989;RSQ=0.9147;ERATE=0.0003;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 24878581 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8540;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24878596 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1774;AVGPOST=0.9993;RSQ=0.9979;ERATE=0.0004;THETA=0.0006;AC=388;AN=2184 GT:DS:GL:BD 0.17765568 0
1 24878670 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0040;AVGPOST=0.9991;RSQ=0.8963;ERATE=0.0007;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 24878710 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1342;AVGPOST=0.9983;RSQ=0.9942;ERATE=0.0004;THETA=0.0009;AC=293;AN=2184 GT:DS:GL:BD 0.13415751 0
1 24878719 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24878742 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8689;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24878789 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1771;AVGPOST=0.9994;RSQ=0.9982;ERATE=0.0003;THETA=0.0003;AC=388;AN=2184 GT:DS:GL:BD 0.17765568 0
1 24878804 . CCT C 49 PASS INDEL;BAVGPOST=0.977;BRSQ=0.264;LDAF=0.0718;AVGPOST=0.8891;RSQ=0.3608;ERATE=0.0075;THETA=0.0014;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 24878836 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9443;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24878849 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24878856 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24878876 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0023;AVGPOST=0.9997;RSQ=0.9356;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24878887 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8176;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24879037 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7191;ERATE=0.0003;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24879056 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.8114;ERATE=0.0003;THETA=0.0032;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24879059 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24879159 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1550;AVGPOST=0.9983;RSQ=0.9949;ERATE=0.0004;THETA=0.0033;AC=340;AN=2184 GT:DS:GL:BD 0.15567766 0
1 24879226 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.984;LDAF=0.1529;AVGPOST=0.9923;RSQ=0.9784;ERATE=0.0008;THETA=0.0016;AC=337;AN=2184 GT:DS:GL:BD 0.15430403 0
1 24879233 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7067;ERATE=0.0003;THETA=0.0034;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24879234 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.725;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7461;ERATE=0.0004;THETA=0.0051;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24879265 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.960;LDAF=0.3507;AVGPOST=0.9790;RSQ=0.9656;ERATE=0.0008;THETA=0.0023;AC=773;AN=2184 GT:DS:GL:BD 0.35393772 0
1 24879312 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.945;LDAF=0.1671;AVGPOST=0.9572;RSQ=0.8896;ERATE=0.0060;THETA=0.0047;AC=357;AN=2184 GT:DS:GL:BD 0.16346154 0
1 24879359 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.945;LDAF=0.1884;AVGPOST=0.9675;RSQ=0.9206;ERATE=0.0026;THETA=0.0069;AC=407;AN=2184 GT:DS:GL:BD 0.18635531 0
1 24879435 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.956;LDAF=0.1529;AVGPOST=0.9746;RSQ=0.9269;ERATE=0.0009;THETA=0.0123;AC=339;AN=2184 GT:DS:GL:BD 0.15521978 0
1 24879575 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.834;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9286;ERATE=0.0003;THETA=0.0157;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 24879798 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0117;AVGPOST=0.9979;RSQ=0.9203;ERATE=0.0005;THETA=0.0162;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 24879844 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5672;ERATE=0.0004;THETA=0.0074;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24879879 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.830;LDAF=0.0025;AVGPOST=0.9994;RSQ=0.8871;ERATE=0.0006;THETA=0.0128;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24879962 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.946;BRSQ=0.910;LDAF=0.5071;AVGPOST=0.9452;RSQ=0.9203;ERATE=0.0064;THETA=0.0145;AC=1107;AN=2184 GT:DS:GL:BD 0.50686812 1
1 24879977 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0004;THETA=0.0199;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24880257 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0266;AVGPOST=0.9956;RSQ=0.9435;ERATE=0.0003;THETA=0.0252;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 24880383 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.950;LDAF=0.0533;AVGPOST=0.9925;RSQ=0.9517;ERATE=0.0026;THETA=0.0173;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 24880448 rs68154656 G GC 671 PASS INDEL;BAVGPOST=0.994;BRSQ=0.803;LDAF=0.0112;AVGPOST=0.9945;RSQ=0.8150;ERATE=0.0004;THETA=0.0080;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 24880478 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.666;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.6933;ERATE=0.0003;THETA=0.0085;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24880579 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.639;LDAF=0.0023;AVGPOST=0.9976;RSQ=0.5917;ERATE=0.0008;THETA=0.0129;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24880589 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.971;LDAF=0.3191;AVGPOST=0.9855;RSQ=0.9730;ERATE=0.0015;THETA=0.0096;AC=698;AN=2184 GT:DS:GL:BD 0.31959707 0
1 24880815 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0115;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24880906 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2833;AVGPOST=0.9967;RSQ=0.9931;ERATE=0.0005;THETA=0.0021;AC=619;AN=2184 GT:DS:GL:BD 0.28342491 0
1 24880913 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6915;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24880932 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0070;AVGPOST=0.9997;RSQ=0.9779;ERATE=0.0004;THETA=0.0020;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 24880951 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.713;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7029;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24880973 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3719;AVGPOST=0.9954;RSQ=0.9916;ERATE=0.0014;THETA=0.0018;AC=812;AN=2184 GT:DS:GL:BD 0.37179488 0
1 24880980 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.649;LDAF=0.0020;AVGPOST=0.9978;RSQ=0.5369;ERATE=0.0012;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24881034 . TG T 132 PASS INDEL;BAVGPOST=0.912;BRSQ=0.349;LDAF=0.0911;AVGPOST=0.8962;RSQ=0.5253;ERATE=0.0089;THETA=0.0007;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 24881036 rs75732380 GC G 11771 PASS INDEL;BAVGPOST=0.984;BRSQ=0.960;LDAF=0.2797;AVGPOST=0.9470;RSQ=0.8953;ERATE=0.0076;THETA=0.0004;AC=593;AN=2184 GT:DS:GL:BD 0.27152014 0
1 24881042 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3736;AVGPOST=0.9942;RSQ=0.9900;ERATE=0.0014;THETA=0.0006;AC=815;AN=2184 GT:DS:GL:BD 0.37316850 0
1 24881126 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3736;AVGPOST=0.9983;RSQ=0.9968;ERATE=0.0004;THETA=0.0007;AC=814;AN=2184 GT:DS:GL:BD 0.37271062 0
1 24881148 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0026;AVGPOST=0.9986;RSQ=0.8104;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24881178 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3836;AVGPOST=0.9980;RSQ=0.9963;ERATE=0.0005;THETA=0.0004;AC=836;AN=2184 GT:DS:GL:BD 0.38278389 0
1 24881185 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.974;LDAF=0.0238;AVGPOST=0.9982;RSQ=0.9696;ERATE=0.0003;THETA=0.0022;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 24881324 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.950;LDAF=0.0068;AVGPOST=0.9966;RSQ=0.8353;ERATE=0.0005;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 24881388 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.640;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.3921;ERATE=0.0006;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24881412 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5434;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24881453 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.5346;AVGPOST=0.9936;RSQ=0.9894;ERATE=0.0014;THETA=0.0004;AC=1168;AN=2184 GT:DS:GL:BD 0.53479856 1
1 24881514 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.987;LDAF=0.8381;AVGPOST=0.9892;RSQ=0.9718;ERATE=0.0007;THETA=0.0004;AC=1838;AN=2184 GT:DS:GL:BD 0.84157509 1
1 24881542 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.987;LDAF=0.5352;AVGPOST=0.9926;RSQ=0.9878;ERATE=0.0010;THETA=0.0002;AC=1172;AN=2184 GT:DS:GL:BD 0.53663003 1
1 24881543 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0100;AVGPOST=0.9984;RSQ=0.9433;ERATE=0.0003;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 24881581 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0012;AVGPOST=0.9983;RSQ=0.4691;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24881593 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8908;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24881599 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.974;LDAF=0.5340;AVGPOST=0.9900;RSQ=0.9838;ERATE=0.0013;THETA=0.0006;AC=1169;AN=2184 GT:DS:GL:BD 0.53525639 1
1 24881738 . G GATAA 171 PASS INDEL;BAVGPOST=0.999;BRSQ=0.725;LDAF=0.0038;AVGPOST=0.9954;RSQ=0.5061;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24881776 rs34419735 TAA T 5073 PASS INDEL;BAVGPOST=0.936;BRSQ=0.884;LDAF=0.4908;AVGPOST=0.9193;RSQ=0.8768;ERATE=0.0124;THETA=0.0002;AC=1109;AN=2184 GT:DS:GL:BD 0.50778389 1
1 24881779 rs57944551 AAAT A 62534 PASS INDEL;BAVGPOST=0.983;BRSQ=0.975;LDAF=0.5343;AVGPOST=0.9908;RSQ=0.9851;ERATE=0.0007;THETA=0.0059;AC=1168;AN=2184 GT:DS:GL:BD 0.53479856 1
1 24882006 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.971;LDAF=0.4744;AVGPOST=0.9799;RSQ=0.9680;ERATE=0.0029;THETA=0.0003;AC=1044;AN=2184 GT:DS:GL:BD 0.47802198 0
1 24882015 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.974;LDAF=0.4778;AVGPOST=0.9819;RSQ=0.9719;ERATE=0.0016;THETA=0.0004;AC=1049;AN=2184 GT:DS:GL:BD 0.48031136 0
1 24882028 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.973;LDAF=0.4836;AVGPOST=0.9803;RSQ=0.9696;ERATE=0.0009;THETA=0.0029;AC=1061;AN=2184 GT:DS:GL:BD 0.48580587 0
1 24882064 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0021;AVGPOST=0.9989;RSQ=0.7920;ERATE=0.0004;THETA=0.0034;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24882346 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.3423;AVGPOST=0.9923;RSQ=0.9864;ERATE=0.0007;THETA=0.0005;AC=746;AN=2184 GT:DS:GL:BD 0.34157509 0
1 24882421 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.969;LDAF=0.0225;AVGPOST=0.9904;RSQ=0.8279;ERATE=0.0010;THETA=0.0002;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 24882754 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.932;LDAF=0.0278;AVGPOST=0.9811;RSQ=0.7398;ERATE=0.0013;THETA=0.0030;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 24882805 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.938;LDAF=0.1975;AVGPOST=0.9899;RSQ=0.9746;ERATE=0.0008;THETA=0.0003;AC=432;AN=2184 GT:DS:GL:BD 0.19780220 0
1 24882890 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.964;LDAF=0.2154;AVGPOST=0.9939;RSQ=0.9862;ERATE=0.0005;THETA=0.0005;AC=472;AN=2184 GT:DS:GL:BD 0.21611722 0
1 24882897 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.963;LDAF=0.1986;AVGPOST=0.9946;RSQ=0.9870;ERATE=0.0005;THETA=0.0007;AC=435;AN=2184 GT:DS:GL:BD 0.19917582 0
1 24882927 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1210;AVGPOST=0.9942;RSQ=0.9770;ERATE=0.0006;THETA=0.0004;AC=260;AN=2184 GT:DS:GL:BD 0.11904762 0
1 24882939 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.986;LDAF=0.1990;AVGPOST=0.9954;RSQ=0.9896;ERATE=0.0004;THETA=0.0064;AC=436;AN=2184 GT:DS:GL:BD 0.19963370 0
1 24882980 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24883014 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6835;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24883065 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8446;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24883090 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0024;AVGPOST=0.9967;RSQ=0.4194;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24883152 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.986;LDAF=0.3687;AVGPOST=0.9926;RSQ=0.9874;ERATE=0.0013;THETA=0.0002;AC=806;AN=2184 GT:DS:GL:BD 0.36904761 0
1 24883159 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.987;LDAF=0.3699;AVGPOST=0.9947;RSQ=0.9909;ERATE=0.0007;THETA=0.0004;AC=807;AN=2184 GT:DS:GL:BD 0.36950549 0
1 24883179 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.3675;AVGPOST=0.9953;RSQ=0.9920;ERATE=0.0006;THETA=0.0006;AC=803;AN=2184 GT:DS:GL:BD 0.36767399 0
1 24883196 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.3637;AVGPOST=0.9955;RSQ=0.9923;ERATE=0.0007;THETA=0.0009;AC=794;AN=2184 GT:DS:GL:BD 0.36355311 0
1 24883234 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4888;AVGPOST=0.9943;RSQ=0.9907;ERATE=0.0010;THETA=0.0001;AC=1068;AN=2184 GT:DS:GL:BD 0.48901099 0
1 24883281 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9996;RSQ=0.9631;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 24883300 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.756;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8187;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24883484 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7565;ERATE=0.0005;THETA=0.0038;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24883551 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.6852;AVGPOST=0.9976;RSQ=0.9955;ERATE=0.0005;THETA=0.0005;AC=1495;AN=2184 GT:DS:GL:BD 0.68452382 1
1 24883597 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7464;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24883605 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0021;AVGPOST=0.9982;RSQ=0.7176;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24883642 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0845;AVGPOST=0.9990;RSQ=0.9941;ERATE=0.0003;THETA=0.0003;AC=184;AN=2184 GT:DS:GL:BD 0.08424909 0
1 24883671 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.769;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7438;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24883759 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0004;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24883834 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.9070;ERATE=0.0004;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24883841 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24883854 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0023;AVGPOST=0.9993;RSQ=0.8858;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24883869 . CATGTGTGT C 2177 PASS INDEL;BAVGPOST=0.998;BRSQ=0.920;LDAF=0.0101;AVGPOST=0.9981;RSQ=0.9267;ERATE=0.0004;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 24883877 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.865;LDAF=0.0097;AVGPOST=0.9983;RSQ=0.9368;ERATE=0.0003;THETA=0.0007;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 24883886 . ATG A 148 PASS INDEL;BAVGPOST=0.987;BRSQ=0.678;LDAF=0.0313;AVGPOST=0.9683;RSQ=0.5834;ERATE=0.0127;THETA=0.0007;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 24883904 rs66897322 TTGTGTGCATG T 28028 PASS INDEL;BAVGPOST=0.976;BRSQ=0.920;LDAF=0.1683;AVGPOST=0.9882;RSQ=0.9673;ERATE=0.0013;THETA=0.0005;AC=369;AN=2184 GT:DS:GL:BD 0.16895604 0
1 24883937 . CGTGTGTGCGT C 473 PASS INDEL;BAVGPOST=0.999;BRSQ=0.747;LDAF=0.0053;AVGPOST=0.9964;RSQ=0.7225;ERATE=0.0006;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 24884069 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6778;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24884273 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0104;AVGPOST=0.9989;RSQ=0.9521;ERATE=0.0005;THETA=0.0008;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 24884319 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.706;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.9094;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24884325 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.780;LDAF=0.0019;AVGPOST=0.9983;RSQ=0.6618;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24884327 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.4463;AVGPOST=0.9904;RSQ=0.9849;ERATE=0.0029;THETA=0.0002;AC=973;AN=2184 GT:DS:GL:BD 0.44551283 0
1 24884330 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0075;AVGPOST=0.9983;RSQ=0.9127;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 24884380 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6550;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24884384 . GA G 569 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0057;AVGPOST=0.9992;RSQ=0.9328;ERATE=0.0004;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 24884404 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0243;AVGPOST=0.9994;RSQ=0.9897;ERATE=0.0004;THETA=0.0009;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 24884460 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4863;AVGPOST=0.9962;RSQ=0.9944;ERATE=0.0009;THETA=0.0004;AC=1062;AN=2184 GT:DS:GL:BD 0.48626372 0
1 24884461 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0033;AVGPOST=0.9981;RSQ=0.7719;ERATE=0.0004;THETA=0.0025;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24884479 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0101;AVGPOST=0.9978;RSQ=0.9095;ERATE=0.0004;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 24884543 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.797;LDAF=0.0030;AVGPOST=0.9983;RSQ=0.7725;ERATE=0.0008;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24884659 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.968;LDAF=0.0240;AVGPOST=0.9991;RSQ=0.9856;ERATE=0.0003;THETA=0.0008;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 24884816 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.725;LDAF=0.0019;AVGPOST=0.9976;RSQ=0.5144;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24884965 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24885111 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0025;AVGPOST=0.9994;RSQ=0.9212;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24885116 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0115;AVGPOST=0.9997;RSQ=0.9877;ERATE=0.0003;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 24885194 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0358;AVGPOST=0.9970;RSQ=0.9758;ERATE=0.0004;THETA=0.0002;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 24885257 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0115;AVGPOST=0.9997;RSQ=0.9893;ERATE=0.0003;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 24885384 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.768;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24885393 . AAAAAG A 206 PASS INDEL;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7476;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24885444 . CTT C 40 PASS INDEL;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5569;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24885472 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0884;AVGPOST=0.9991;RSQ=0.9950;ERATE=0.0004;THETA=0.0002;AC=193;AN=2184 GT:DS:GL:BD 0.08836997 0
1 24885540 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9643;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24885736 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0043;AVGPOST=0.9989;RSQ=0.8968;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 24885851 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.966;LDAF=0.2150;AVGPOST=0.9907;RSQ=0.9810;ERATE=0.0003;THETA=0.0004;AC=473;AN=2184 GT:DS:GL:BD 0.21657509 0
1 24885852 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.966;LDAF=0.2148;AVGPOST=0.9897;RSQ=0.9796;ERATE=0.0004;THETA=0.0009;AC=474;AN=2184 GT:DS:GL:BD 0.21703297 0
1 24885989 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.987;LDAF=0.2202;AVGPOST=0.9948;RSQ=0.9889;ERATE=0.0005;THETA=0.0002;AC=483;AN=2184 GT:DS:GL:BD 0.22115384 0
1 24886035 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24886103 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6373;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24886128 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.969;LDAF=0.0744;AVGPOST=0.9981;RSQ=0.9887;ERATE=0.0004;THETA=0.0003;AC=162;AN=2184 GT:DS:GL:BD 0.07417583 0
1 24886136 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.979;LDAF=0.2198;AVGPOST=0.9961;RSQ=0.9915;ERATE=0.0003;THETA=0.0003;AC=482;AN=2184 GT:DS:GL:BD 0.22069597 0
1 24886160 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.978;LDAF=0.2216;AVGPOST=0.9961;RSQ=0.9915;ERATE=0.0003;THETA=0.0026;AC=486;AN=2184 GT:DS:GL:BD 0.22252747 0
1 24886182 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0043;AVGPOST=0.9989;RSQ=0.8946;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 24886238 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.696;LDAF=0.0048;AVGPOST=0.9963;RSQ=0.6894;ERATE=0.0004;THETA=0.0022;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 24886319 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7041;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24886391 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.485;LDAF=0.0049;AVGPOST=0.9935;RSQ=0.4669;ERATE=0.0005;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 24886427 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.986;LDAF=0.2215;AVGPOST=0.9846;RSQ=0.9669;ERATE=0.0016;THETA=0.0004;AC=484;AN=2184 GT:DS:GL:BD 0.22161172 0
1 24886493 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.981;LDAF=0.2227;AVGPOST=0.9966;RSQ=0.9914;ERATE=0.0008;THETA=0.0010;AC=488;AN=2184 GT:DS:GL:BD 0.22344323 0
1 24886577 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.949;BRSQ=0.881;LDAF=0.2750;AVGPOST=0.9570;RSQ=0.9175;ERATE=0.0028;THETA=0.0002;AC=609;AN=2184 GT:DS:GL:BD 0.27884614 0
1 24886700 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24886779 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.855;LDAF=0.0056;AVGPOST=0.9984;RSQ=0.8964;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 24886784 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9268;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24886818 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2236;AVGPOST=0.9994;RSQ=0.9986;ERATE=0.0003;THETA=0.0003;AC=488;AN=2184 GT:DS:GL:BD 0.22344323 0
1 24886862 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7572;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24886958 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8096;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24887022 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.691;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5736;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24887094 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.738;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24887101 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8908;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24887118 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.915;LDAF=0.0112;AVGPOST=0.9976;RSQ=0.9240;ERATE=0.0004;THETA=0.0011;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 24887128 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0112;AVGPOST=0.9962;RSQ=0.8741;ERATE=0.0003;THETA=0.0045;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 24887263 . CTT C 2157 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0121;AVGPOST=0.9982;RSQ=0.9358;ERATE=0.0005;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 24887294 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.825;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8794;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24887457 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.2920;AVGPOST=0.9954;RSQ=0.9915;ERATE=0.0007;THETA=0.0005;AC=637;AN=2184 GT:DS:GL:BD 0.29166666 0
1 24887547 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.987;LDAF=0.2242;AVGPOST=0.9929;RSQ=0.9852;ERATE=0.0007;THETA=0.0003;AC=488;AN=2184 GT:DS:GL:BD 0.22344323 0
1 24887549 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6171;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24887589 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0045;AVGPOST=0.9957;RSQ=0.6794;ERATE=0.0007;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24887621 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.923;LDAF=0.1255;AVGPOST=0.9916;RSQ=0.9700;ERATE=0.0006;THETA=0.0003;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 24887701 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1136;AVGPOST=0.9947;RSQ=0.9779;ERATE=0.0010;THETA=0.0002;AC=248;AN=2184 GT:DS:GL:BD 0.11355311 0
1 24887707 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.4159;ERATE=0.0005;THETA=0.0027;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24887748 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0125;AVGPOST=0.9983;RSQ=0.9427;ERATE=0.0005;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 24887792 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9411;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24887793 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0039;AVGPOST=0.9960;RSQ=0.6567;ERATE=0.0005;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24887807 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.722;LDAF=0.0028;AVGPOST=0.9967;RSQ=0.5856;ERATE=0.0003;THETA=0.0013;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24887920 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.6540;AVGPOST=0.9972;RSQ=0.9949;ERATE=0.0008;THETA=0.0005;AC=1429;AN=2184 GT:DS:GL:BD 0.65430403 1
1 24887966 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.7628;AVGPOST=0.9863;RSQ=0.9727;ERATE=0.0016;THETA=0.0002;AC=1670;AN=2184 GT:DS:GL:BD 0.76465201 1
1 24887978 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6544;AVGPOST=0.9975;RSQ=0.9954;ERATE=0.0003;THETA=0.0007;AC=1429;AN=2184 GT:DS:GL:BD 0.65430403 1
1 24888013 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0023;AVGPOST=0.9973;RSQ=0.5378;ERATE=0.0007;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24888020 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0085;AVGPOST=0.9986;RSQ=0.9430;ERATE=0.0004;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 24888077 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9996;RSQ=0.9597;ERATE=0.0005;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 24888124 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.952;LDAF=0.0385;AVGPOST=0.9987;RSQ=0.9863;ERATE=0.0003;THETA=0.0004;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 24888128 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8889;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24888129 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.732;LDAF=0.0027;AVGPOST=0.9966;RSQ=0.5536;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24888166 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4074;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24888228 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.776;LDAF=0.0018;AVGPOST=0.9975;RSQ=0.4938;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24888363 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.6493;AVGPOST=0.9970;RSQ=0.9945;ERATE=0.0005;THETA=0.0002;AC=1418;AN=2184 GT:DS:GL:BD 0.64926738 1
1 24888365 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.557;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.6487;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24888585 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6535;AVGPOST=0.9976;RSQ=0.9962;ERATE=0.0004;THETA=0.0003;AC=1428;AN=2184 GT:DS:GL:BD 0.65384614 1
1 24888751 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6565;AVGPOST=0.9992;RSQ=0.9987;ERATE=0.0003;THETA=0.0003;AC=1434;AN=2184 GT:DS:GL:BD 0.65659338 1
1 24888807 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24888973 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3390;AVGPOST=0.9991;RSQ=0.9984;ERATE=0.0004;THETA=0.0003;AC=739;AN=2184 GT:DS:GL:BD 0.33836997 0
1 24889059 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0242;AVGPOST=0.9992;RSQ=0.9875;ERATE=0.0003;THETA=0.0003;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 24889266 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.986;LDAF=0.0394;AVGPOST=0.9976;RSQ=0.9768;ERATE=0.0004;THETA=0.0007;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 24889345 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0017;AVGPOST=0.9986;RSQ=0.6936;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24889357 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.972;LDAF=0.1631;AVGPOST=0.9913;RSQ=0.9769;ERATE=0.0006;THETA=0.0004;AC=354;AN=2184 GT:DS:GL:BD 0.16208792 0
1 24889396 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6437;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24889413 . C CCT 595 PASS INDEL;BAVGPOST=0.996;BRSQ=0.824;LDAF=0.0112;AVGPOST=0.9926;RSQ=0.7559;ERATE=0.0007;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 24889450 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.3029;AVGPOST=0.9980;RSQ=0.9958;ERATE=0.0004;THETA=0.0005;AC=661;AN=2184 GT:DS:GL:BD 0.30265567 0
1 24889574 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0058;AVGPOST=0.9985;RSQ=0.9010;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 24889744 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0043;AVGPOST=0.9970;RSQ=0.7569;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 24889778 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.535;LDAF=0.0044;AVGPOST=0.9947;RSQ=0.4967;ERATE=0.0014;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24889824 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1314;AVGPOST=0.9971;RSQ=0.9900;ERATE=0.0005;THETA=0.0002;AC=287;AN=2184 GT:DS:GL:BD 0.13141026 0
1 24889872 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.944;LDAF=0.1298;AVGPOST=0.9964;RSQ=0.9872;ERATE=0.0005;THETA=0.0002;AC=285;AN=2184 GT:DS:GL:BD 0.13049451 0
1 24889873 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.760;LDAF=0.0032;AVGPOST=0.9958;RSQ=0.4874;ERATE=0.0008;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24889884 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.947;LDAF=0.1301;AVGPOST=0.9909;RSQ=0.9696;ERATE=0.0016;THETA=0.0001;AC=287;AN=2184 GT:DS:GL:BD 0.13141026 0
1 24889889 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.959;LDAF=0.0341;AVGPOST=0.9920;RSQ=0.9088;ERATE=0.0004;THETA=0.0005;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 24889961 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.933;LDAF=0.0124;AVGPOST=0.9984;RSQ=0.9392;ERATE=0.0005;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 24889969 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.932;LDAF=0.0131;AVGPOST=0.9969;RSQ=0.9238;ERATE=0.0003;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 24889985 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0007;AVGPOST=0.9988;RSQ=0.2683;ERATE=0.0005;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 24889994 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3424;AVGPOST=0.9944;RSQ=0.9903;ERATE=0.0008;THETA=0.0004;AC=746;AN=2184 GT:DS:GL:BD 0.34157509 0
1 24890011 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5415;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24890095 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24890169 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8178;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24890183 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9682;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24890242 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0024;AVGPOST=0.9983;RSQ=0.7498;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24890320 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.766;LDAF=0.0024;AVGPOST=0.9992;RSQ=0.8948;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24890435 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0023;AVGPOST=0.9996;RSQ=0.9297;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24890559 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0926;AVGPOST=0.9992;RSQ=0.9961;ERATE=0.0003;THETA=0.0006;AC=202;AN=2184 GT:DS:GL:BD 0.09249084 0
1 24890711 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0047;AVGPOST=0.9984;RSQ=0.8609;ERATE=0.0003;THETA=0.0001;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 24890858 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.953;LDAF=0.1335;AVGPOST=0.9977;RSQ=0.9925;ERATE=0.0004;THETA=0.0002;AC=293;AN=2184 GT:DS:GL:BD 0.13415751 0
1 24890883 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.967;BRSQ=0.943;LDAF=0.4508;AVGPOST=0.9346;RSQ=0.9015;ERATE=0.0130;THETA=0.0004;AC=997;AN=2184 GT:DS:GL:BD 0.45650184 0
1 24890961 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.632;LDAF=0.0051;AVGPOST=0.9960;RSQ=0.7120;ERATE=0.0008;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 24890985 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.970;LDAF=0.1189;AVGPOST=0.9892;RSQ=0.9645;ERATE=0.0007;THETA=0.0002;AC=260;AN=2184 GT:DS:GL:BD 0.11904762 0
1 24891024 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.849;BRSQ=0.695;LDAF=0.5502;AVGPOST=0.8164;RSQ=0.6681;ERATE=0.0829;THETA=0.0003;AC=1231;AN=2184 GT:DS:GL:BD 0.56364471 1
1 24891024 rs60281828 C CA 7146 PASS INDEL;BAVGPOST=0.857;BRSQ=0.251;LDAF=0.8543;AVGPOST=0.8423;RSQ=0.4935;ERATE=0.0120;THETA=0.0015;AC=1955;AN=2184 GT:DS:GL:BD 0.89514655 1
1 24891068 . AAAAGG A 259 PASS INDEL;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0045;AVGPOST=0.9985;RSQ=0.8726;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 24891114 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1367;AVGPOST=0.9984;RSQ=0.9946;ERATE=0.0003;THETA=0.0003;AC=300;AN=2184 GT:DS:GL:BD 0.13736264 0
1 24891140 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5266;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24891161 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4743;AVGPOST=0.9985;RSQ=0.9976;ERATE=0.0005;THETA=0.0002;AC=1036;AN=2184 GT:DS:GL:BD 0.47435898 0
1 24891208 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1362;AVGPOST=0.9990;RSQ=0.9967;ERATE=0.0003;THETA=0.0002;AC=297;AN=2184 GT:DS:GL:BD 0.13598901 0
1 24891221 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1358;AVGPOST=0.9997;RSQ=0.9990;ERATE=0.0003;THETA=0.0003;AC=297;AN=2184 GT:DS:GL:BD 0.13598901 0
1 24891229 . CAG C 23 PASS INDEL;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4271;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24891340 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1713;AVGPOST=0.9989;RSQ=0.9967;ERATE=0.0003;THETA=0.0005;AC=374;AN=2184 GT:DS:GL:BD 0.17124543 0
1 24891546 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9925;ERATE=0.0003;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 24891590 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6035;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24891605 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6404;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24891677 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.709;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5286;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24891715 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1357;AVGPOST=0.9987;RSQ=0.9954;ERATE=0.0004;THETA=0.0002;AC=297;AN=2184 GT:DS:GL:BD 0.13598901 0
1 24891823 . AC A 110 PASS INDEL;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4468;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24891901 rs34110358 C CA 71316 PASS INDEL;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4744;AVGPOST=0.9986;RSQ=0.9977;ERATE=0.0005;THETA=0.0003;AC=1036;AN=2184 GT:DS:GL:BD 0.47435898 0
1 24891955 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9799;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24892263 rs112817356 AT A 10848 PASS INDEL;BAVGPOST=0.995;BRSQ=0.981;LDAF=0.1364;AVGPOST=0.9954;RSQ=0.9853;ERATE=0.0009;THETA=0.0003;AC=297;AN=2184 GT:DS:GL:BD 0.13598901 0
1 24892293 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1145;AVGPOST=0.9984;RSQ=0.9936;ERATE=0.0003;THETA=0.0002;AC=249;AN=2184 GT:DS:GL:BD 0.11401099 0
1 24892319 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9104;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24892454 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.3010;AVGPOST=0.9968;RSQ=0.9942;ERATE=0.0004;THETA=0.0003;AC=655;AN=2184 GT:DS:GL:BD 0.29990843 0
1 24892499 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1362;AVGPOST=0.9982;RSQ=0.9946;ERATE=0.0005;THETA=0.0003;AC=298;AN=2184 GT:DS:GL:BD 0.13644689 0
1 24892511 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9244;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24892535 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1358;AVGPOST=0.9993;RSQ=0.9973;ERATE=0.0003;THETA=0.0002;AC=297;AN=2184 GT:DS:GL:BD 0.13598901 0
1 24892547 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0098;AVGPOST=0.9989;RSQ=0.9558;ERATE=0.0004;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 24892559 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6608;AVGPOST=0.9964;RSQ=0.9939;ERATE=0.0006;THETA=0.0004;AC=1446;AN=2184 GT:DS:GL:BD 0.66208792 1
1 24892816 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6612;AVGPOST=0.9993;RSQ=0.9986;ERATE=0.0004;THETA=0.0003;AC=1444;AN=2184 GT:DS:GL:BD 0.66117215 1
1 24892818 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.827;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8821;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24892993 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1364;AVGPOST=0.9986;RSQ=0.9952;ERATE=0.0005;THETA=0.0010;AC=298;AN=2184 GT:DS:GL:BD 0.13644689 0
1 24893447 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6338;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24893496 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.733;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5752;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24893596 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9927;ERATE=0.0003;THETA=0.0015;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 24893669 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0396;AVGPOST=0.9993;RSQ=0.9935;ERATE=0.0003;THETA=0.0003;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 24893672 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8551;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24893749 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.7076;ERATE=0.0003;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24893808 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6133;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24893893 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5605;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24893915 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.830;LDAF=0.0037;AVGPOST=0.9983;RSQ=0.8155;ERATE=0.0007;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24893960 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24894058 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24894134 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7052;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24894221 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3223;AVGPOST=0.9983;RSQ=0.9965;ERATE=0.0005;THETA=0.0003;AC=703;AN=2184 GT:DS:GL:BD 0.32188645 0
1 24894456 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6885;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24894482 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0935;AVGPOST=0.9983;RSQ=0.9920;ERATE=0.0004;THETA=0.0004;AC=203;AN=2184 GT:DS:GL:BD 0.09294872 0
1 24894545 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.6039;ERATE=0.0004;THETA=0.0047;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24894671 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0033;AVGPOST=0.9978;RSQ=0.7301;ERATE=0.0006;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24894937 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0304;AVGPOST=0.9989;RSQ=0.9840;ERATE=0.0004;THETA=0.0065;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 24894997 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.2543;AVGPOST=0.9972;RSQ=0.9942;ERATE=0.0005;THETA=0.0022;AC=554;AN=2184 GT:DS:GL:BD 0.25366300 0
1 24895051 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.3396;AVGPOST=0.9972;RSQ=0.9947;ERATE=0.0004;THETA=0.0005;AC=742;AN=2184 GT:DS:GL:BD 0.33974358 0
1 24895071 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.2544;AVGPOST=0.9966;RSQ=0.9926;ERATE=0.0010;THETA=0.0004;AC=555;AN=2184 GT:DS:GL:BD 0.25412089 0
1 24895103 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0107;AVGPOST=0.9978;RSQ=0.9247;ERATE=0.0004;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 24895110 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0245;AVGPOST=0.9979;RSQ=0.9702;ERATE=0.0003;THETA=0.0005;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 24895112 . GTTA G 26 PASS INDEL;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7307;ERATE=0.0004;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24895187 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0037;AVGPOST=0.9990;RSQ=0.8899;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24895253 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.6236;AVGPOST=0.9981;RSQ=0.9964;ERATE=0.0005;THETA=0.0002;AC=1361;AN=2184 GT:DS:GL:BD 0.62316847 1
1 24895270 . T TCGGG 39 PASS INDEL;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5198;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24895293 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0262;AVGPOST=0.9988;RSQ=0.9793;ERATE=0.0004;THETA=0.0002;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 24895301 . CA C 64 PASS INDEL;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.6323;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24895311 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24895394 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.7174;AVGPOST=0.9977;RSQ=0.9954;ERATE=0.0004;THETA=0.0007;AC=1565;AN=2184 GT:DS:GL:BD 0.71657509 1
1 24895459 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24895492 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0252;AVGPOST=0.9997;RSQ=0.9949;ERATE=0.0003;THETA=0.0003;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 24895521 . T TG 759 PASS INDEL;BAVGPOST=0.917;BRSQ=0.481;LDAF=0.1179;AVGPOST=0.8812;RSQ=0.5399;ERATE=0.0251;THETA=0.0002;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 24895522 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.2639;AVGPOST=0.9878;RSQ=0.9756;ERATE=0.0046;THETA=0.0008;AC=575;AN=2184 GT:DS:GL:BD 0.26327839 0
1 24895554 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0253;AVGPOST=0.9995;RSQ=0.9916;ERATE=0.0003;THETA=0.0005;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 24895583 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.982;LDAF=0.3108;AVGPOST=0.9924;RSQ=0.9856;ERATE=0.0008;THETA=0.0007;AC=679;AN=2184 GT:DS:GL:BD 0.31089744 0
1 24895588 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0254;AVGPOST=0.9995;RSQ=0.9902;ERATE=0.0004;THETA=0.0002;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 24895673 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.812;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6791;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24895743 MERGED_DEL_2_2402 CCAAAGTGCTGGGATTACAGGCATGAGCCACCATGTCCAGTCCCAACATATTTCTTGAATCTAGGTTCCACTCTGGCCCTCCCTGGGCACTAGACTTCACTGTGCTGGGACCTTCACTCTCCCACCCACTCACCACATCCTACACTTTCCTTCCCTAATGTGCCCATTCCCACCCCCTCCTCCCCAGACT C . . SV;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0254;AVGPOST=0.9993;RSQ=0.9892;ERATE=0.0003;THETA=0.0004;CIEND=-63,90;CIPOS=-92,65;END=24900868;HOMLEN=31;HOMSEQ=CAAAGTGCTGGGATTACAGGCATGAGCCACC;SOURCE=Br GT:DS:GL:BD 0.02518315 0
1 24895744 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.789;LDAF=0.0026;AVGPOST=0.9984;RSQ=0.7362;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24895748 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.613;LDAF=0.0020;AVGPOST=0.9993;RSQ=0.8425;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24895805 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0232;AVGPOST=0.9987;RSQ=0.9812;ERATE=0.0003;THETA=0.0005;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 24895818 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.951;LDAF=0.0112;AVGPOST=0.9995;RSQ=0.9798;ERATE=0.0003;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 24895999 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0033;AVGPOST=0.9987;RSQ=0.8476;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24896001 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0008;AVGPOST=0.9989;RSQ=0.5384;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24896015 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.700;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6102;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24896030 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8276;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24896032 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0033;AVGPOST=0.9994;RSQ=0.9208;ERATE=0.0004;THETA=0.0011;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24896045 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0091;AVGPOST=0.9990;RSQ=0.9511;ERATE=0.0004;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 24896072 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.7142;ERATE=0.0003;THETA=0.0027;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24896140 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0106;AVGPOST=0.9994;RSQ=0.9820;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 24896162 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0114;AVGPOST=0.9991;RSQ=0.9681;ERATE=0.0004;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 24896331 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7952;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24896395 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24896413 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5762;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24896444 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.702;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24896447 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0030;AVGPOST=0.9972;RSQ=0.6715;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24896479 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.696;LDAF=0.0088;AVGPOST=0.9907;RSQ=0.6133;ERATE=0.0024;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 24896647 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.766;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.4147;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24896761 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24896815 . C CA 58 PASS INDEL;BAVGPOST=0.994;BRSQ=0.498;LDAF=0.0124;AVGPOST=0.9859;RSQ=0.5535;ERATE=0.0022;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 24896868 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1450;AVGPOST=0.9974;RSQ=0.9921;ERATE=0.0003;THETA=0.0005;AC=315;AN=2184 GT:DS:GL:BD 0.14423077 0
1 24896928 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.744;LDAF=0.0051;AVGPOST=0.9966;RSQ=0.7232;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 24897117 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7348;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24897205 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.873;LDAF=0.0102;AVGPOST=0.9967;RSQ=0.8690;ERATE=0.0005;THETA=0.0007;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 24897309 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.8156;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24897355 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24897437 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0027;AVGPOST=0.9998;RSQ=0.9643;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24897449 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.747;LDAF=0.0038;AVGPOST=0.9988;RSQ=0.8748;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24897567 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0112;AVGPOST=0.9985;RSQ=0.9570;ERATE=0.0003;THETA=0.0007;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 24897880 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0058;AVGPOST=0.9959;RSQ=0.7206;ERATE=0.0005;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 24897897 . CAG C 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0017;AVGPOST=0.9978;RSQ=0.4956;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24897963 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.557;LDAF=0.0293;AVGPOST=0.9662;RSQ=0.5480;ERATE=0.0077;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 24897997 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7535;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24898071 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.6011;AVGPOST=0.9924;RSQ=0.9881;ERATE=0.0007;THETA=0.0002;AC=1311;AN=2184 GT:DS:GL:BD 0.60027474 1
1 24898080 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.419;LDAF=0.0019;AVGPOST=0.9976;RSQ=0.5624;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24898081 . C CT 135 PASS INDEL;BAVGPOST=0.992;BRSQ=0.424;LDAF=0.0169;AVGPOST=0.9751;RSQ=0.4451;ERATE=0.0020;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 24898090 . TC T 63 PASS INDEL;BAVGPOST=0.987;BRSQ=0.583;LDAF=0.0256;AVGPOST=0.9700;RSQ=0.5160;ERATE=0.0097;THETA=0.0007;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 24898116 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.561;LDAF=0.0102;AVGPOST=0.9875;RSQ=0.5074;ERATE=0.0029;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 24898169 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.420;LDAF=0.0087;AVGPOST=0.9885;RSQ=0.4734;ERATE=0.0019;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 24898251 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.988;LDAF=0.5939;AVGPOST=0.9782;RSQ=0.9667;ERATE=0.0020;THETA=0.0005;AC=1302;AN=2184 GT:DS:GL:BD 0.59615386 1
1 24898375 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1436;AVGPOST=0.9987;RSQ=0.9957;ERATE=0.0004;THETA=0.0003;AC=313;AN=2184 GT:DS:GL:BD 0.14331502 0
1 24898377 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.621;LDAF=0.0025;AVGPOST=0.9978;RSQ=0.6857;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24898453 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1211;AVGPOST=0.9989;RSQ=0.9961;ERATE=0.0003;THETA=0.0001;AC=263;AN=2184 GT:DS:GL:BD 0.12042125 0
1 24898489 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1207;AVGPOST=0.9981;RSQ=0.9929;ERATE=0.0005;THETA=0.0005;AC=263;AN=2184 GT:DS:GL:BD 0.12042125 0
1 24898657 rs10650039 A AAACC 21312 PASS INDEL;BAVGPOST=0.996;BRSQ=0.984;LDAF=0.1438;AVGPOST=0.9977;RSQ=0.9937;ERATE=0.0005;THETA=0.0004;AC=312;AN=2184 GT:DS:GL:BD 0.14285715 0
1 24898950 . TG T 779 PASS INDEL;BAVGPOST=0.990;BRSQ=0.694;LDAF=0.0144;AVGPOST=0.9913;RSQ=0.7616;ERATE=0.0004;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 24898964 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.521;LDAF=0.0063;AVGPOST=0.9936;RSQ=0.6337;ERATE=0.0005;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 24899093 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24899132 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.8038;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24899348 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.983;LDAF=0.2760;AVGPOST=0.9924;RSQ=0.9866;ERATE=0.0003;THETA=0.0003;AC=602;AN=2184 GT:DS:GL:BD 0.27564102 0
1 24899384 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6616;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24899490 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1446;AVGPOST=0.9991;RSQ=0.9972;ERATE=0.0003;THETA=0.0004;AC=315;AN=2184 GT:DS:GL:BD 0.14423077 0
1 24899530 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.984;LDAF=0.3074;AVGPOST=0.9935;RSQ=0.9886;ERATE=0.0007;THETA=0.0005;AC=666;AN=2184 GT:DS:GL:BD 0.30494505 0
1 24899535 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6589;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24899694 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.6131;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24899743 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5940;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24899882 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4859;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24899899 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1122;AVGPOST=0.9981;RSQ=0.9926;ERATE=0.0005;THETA=0.0003;AC=244;AN=2184 GT:DS:GL:BD 0.11172161 0
1 24900089 . AAGAAACAAAAAC A 1581 PASS INDEL;BAVGPOST=0.997;BRSQ=0.817;LDAF=0.0106;AVGPOST=0.9953;RSQ=0.8334;ERATE=0.0007;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 24900091 . GAAACAA G 9981 PASS INDEL;BAVGPOST=0.973;BRSQ=0.907;LDAF=0.1512;AVGPOST=0.9880;RSQ=0.9654;ERATE=0.0016;THETA=0.0004;AC=328;AN=2184 GT:DS:GL:BD 0.15018316 0
1 24900146 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0029;AVGPOST=0.9978;RSQ=0.6649;ERATE=0.0007;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24900326 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.986;LDAF=0.7055;AVGPOST=0.9941;RSQ=0.9896;ERATE=0.0004;THETA=0.0003;AC=1542;AN=2184 GT:DS:GL:BD 0.70604396 1
1 24900514 . ATC A 1105 PASS INDEL;BAVGPOST=0.978;BRSQ=0.914;LDAF=0.1292;AVGPOST=0.9845;RSQ=0.9496;ERATE=0.0012;THETA=0.0002;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 24900515 . TCTC T 11817 PASS INDEL;BAVGPOST=0.985;BRSQ=0.945;LDAF=0.1404;AVGPOST=0.9918;RSQ=0.9765;ERATE=0.0004;THETA=0.0002;AC=308;AN=2184 GT:DS:GL:BD 0.14102565 0
1 24900569 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.6057;AVGPOST=0.9886;RSQ=0.9829;ERATE=0.0009;THETA=0.0005;AC=1319;AN=2184 GT:DS:GL:BD 0.60393775 1
1 24900578 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1454;AVGPOST=0.9978;RSQ=0.9939;ERATE=0.0004;THETA=0.0002;AC=317;AN=2184 GT:DS:GL:BD 0.14514652 0
1 24900583 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0089;AVGPOST=0.9982;RSQ=0.9344;ERATE=0.0004;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 24900701 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.983;LDAF=0.1056;AVGPOST=0.9973;RSQ=0.9882;ERATE=0.0005;THETA=0.0003;AC=228;AN=2184 GT:DS:GL:BD 0.10439561 0
1 24900841 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0023;AVGPOST=0.9965;RSQ=0.4592;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24900862 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.658;LDAF=0.0143;AVGPOST=0.9887;RSQ=0.7128;ERATE=0.0011;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 24900880 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.948;LDAF=0.0226;AVGPOST=0.9979;RSQ=0.9621;ERATE=0.0003;THETA=0.0005;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 24900952 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4525;AVGPOST=0.9957;RSQ=0.9926;ERATE=0.0009;THETA=0.0019;AC=987;AN=2184 GT:DS:GL:BD 0.45192307 0
1 24900993 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7068;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24901065 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0055;AVGPOST=0.9996;RSQ=0.9695;ERATE=0.0004;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 24901116 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24901117 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1646;AVGPOST=0.9996;RSQ=0.9987;ERATE=0.0004;THETA=0.0003;AC=359;AN=2184 GT:DS:GL:BD 0.16437729 0
1 24901121 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4519;AVGPOST=0.9983;RSQ=0.9969;ERATE=0.0007;THETA=0.0004;AC=985;AN=2184 GT:DS:GL:BD 0.45100734 0
1 24901310 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.968;LDAF=0.1194;AVGPOST=0.9957;RSQ=0.9843;ERATE=0.0008;THETA=0.0004;AC=257;AN=2184 GT:DS:GL:BD 0.11767399 0
1 24901326 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.535;LDAF=0.0043;AVGPOST=0.9936;RSQ=0.3961;ERATE=0.0011;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24901349 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.779;LDAF=0.0200;AVGPOST=0.9924;RSQ=0.8530;ERATE=0.0005;THETA=0.0005;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 24901420 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.745;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.5471;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24901422 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0027;AVGPOST=0.9993;RSQ=0.8691;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24901432 rs113868019 A AC 10016 PASS INDEL;BAVGPOST=0.983;BRSQ=0.944;LDAF=0.1619;AVGPOST=0.9879;RSQ=0.9664;ERATE=0.0007;THETA=0.0007;AC=362;AN=2184 GT:DS:GL:BD 0.16575092 0
1 24901496 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1164;AVGPOST=0.9968;RSQ=0.9872;ERATE=0.0007;THETA=0.0004;AC=254;AN=2184 GT:DS:GL:BD 0.11630037 0
1 24901506 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.950;LDAF=0.1437;AVGPOST=0.9945;RSQ=0.9828;ERATE=0.0006;THETA=0.0005;AC=312;AN=2184 GT:DS:GL:BD 0.14285715 0
1 24901703 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0088;AVGPOST=0.9977;RSQ=0.8914;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 24901735 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.801;LDAF=0.0071;AVGPOST=0.9952;RSQ=0.7649;ERATE=0.0004;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 24901822 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5979;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24901835 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0032;AVGPOST=0.9973;RSQ=0.6796;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24901844 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.6250;AVGPOST=0.9952;RSQ=0.9919;ERATE=0.0006;THETA=0.0003;AC=1364;AN=2184 GT:DS:GL:BD 0.62454212 1
1 24901850 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1647;AVGPOST=0.9987;RSQ=0.9959;ERATE=0.0005;THETA=0.0001;AC=359;AN=2184 GT:DS:GL:BD 0.16437729 0
1 24901863 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.4608;AVGPOST=0.9952;RSQ=0.9912;ERATE=0.0011;THETA=0.0004;AC=1005;AN=2184 GT:DS:GL:BD 0.46016484 0
1 24901870 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0045;AVGPOST=0.9985;RSQ=0.8750;ERATE=0.0004;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 24901971 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1396;AVGPOST=0.9995;RSQ=0.9981;ERATE=0.0004;THETA=0.0003;AC=304;AN=2184 GT:DS:GL:BD 0.13919415 0
1 24901998 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1646;AVGPOST=0.9997;RSQ=0.9990;ERATE=0.0004;THETA=0.0003;AC=359;AN=2184 GT:DS:GL:BD 0.16437729 0
1 24902026 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.935;LDAF=0.0148;AVGPOST=0.9971;RSQ=0.9273;ERATE=0.0004;THETA=0.0011;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 24902043 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6254;AVGPOST=0.9987;RSQ=0.9974;ERATE=0.0005;THETA=0.0003;AC=1365;AN=2184 GT:DS:GL:BD 0.62500000 1
1 24902076 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0252;AVGPOST=0.9998;RSQ=0.9966;ERATE=0.0003;THETA=0.0003;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 24902185 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.694;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6541;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24902209 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0857;AVGPOST=0.9978;RSQ=0.9878;ERATE=0.0005;THETA=0.0003;AC=186;AN=2184 GT:DS:GL:BD 0.08516484 0
1 24902251 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.938;BRSQ=0.879;LDAF=0.6562;AVGPOST=0.8853;RSQ=0.8069;ERATE=0.0265;THETA=0.0005;AC=1481;AN=2184 GT:DS:GL:BD 0.67811358 1
1 24902266 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.700;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4256;ERATE=0.0007;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24902394 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.971;LDAF=0.1641;AVGPOST=0.9972;RSQ=0.9922;ERATE=0.0007;THETA=0.0014;AC=359;AN=2184 GT:DS:GL:BD 0.16437729 0
1 24902466 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0033;AVGPOST=0.9992;RSQ=0.8948;ERATE=0.0004;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24902506 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1645;AVGPOST=0.9993;RSQ=0.9981;ERATE=0.0004;THETA=0.0003;AC=359;AN=2184 GT:DS:GL:BD 0.16437729 0
1 24902554 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1237;AVGPOST=0.9972;RSQ=0.9906;ERATE=0.0006;THETA=0.0005;AC=268;AN=2184 GT:DS:GL:BD 0.12271062 0
1 24902610 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0099;AVGPOST=0.9985;RSQ=0.9499;ERATE=0.0004;THETA=0.0007;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 24902700 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1642;AVGPOST=0.9989;RSQ=0.9968;ERATE=0.0004;THETA=0.0013;AC=359;AN=2184 GT:DS:GL:BD 0.16437729 0
1 24902786 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1665;AVGPOST=0.9959;RSQ=0.9906;ERATE=0.0004;THETA=0.0005;AC=365;AN=2184 GT:DS:GL:BD 0.16712454 0
1 24902787 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4609;AVGPOST=0.9963;RSQ=0.9940;ERATE=0.0004;THETA=0.0005;AC=1004;AN=2184 GT:DS:GL:BD 0.45970696 0
1 24902788 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0239;AVGPOST=0.9984;RSQ=0.9720;ERATE=0.0004;THETA=0.0002;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 24902830 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6537;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24902834 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.1646;AVGPOST=0.9980;RSQ=0.9944;ERATE=0.0004;THETA=0.0006;AC=360;AN=2184 GT:DS:GL:BD 0.16483517 0
1 24902853 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.622;LDAF=0.0322;AVGPOST=0.9676;RSQ=0.6006;ERATE=0.0091;THETA=0.0011;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 24902925 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0250;AVGPOST=0.9973;RSQ=0.9602;ERATE=0.0005;THETA=0.0002;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 24902929 . TC T 7 PASS INDEL;BAVGPOST=0.999;BRSQ=0.657;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.3210;ERATE=0.0007;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24902941 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0044;AVGPOST=0.9978;RSQ=0.7977;ERATE=0.0006;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 24903005 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0863;AVGPOST=0.9975;RSQ=0.9869;ERATE=0.0006;THETA=0.0021;AC=188;AN=2184 GT:DS:GL:BD 0.08608059 0
1 24903046 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1170;AVGPOST=0.9983;RSQ=0.9936;ERATE=0.0005;THETA=0.0010;AC=254;AN=2184 GT:DS:GL:BD 0.11630037 0
1 24903153 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0093;AVGPOST=0.9997;RSQ=0.9834;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 24903172 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24903243 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24903343 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1644;AVGPOST=0.9982;RSQ=0.9949;ERATE=0.0004;THETA=0.0002;AC=360;AN=2184 GT:DS:GL:BD 0.16483517 0
1 24903357 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.962;LDAF=0.1599;AVGPOST=0.9916;RSQ=0.9770;ERATE=0.0010;THETA=0.0004;AC=351;AN=2184 GT:DS:GL:BD 0.16071428 0
1 24903472 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.956;LDAF=0.4515;AVGPOST=0.9757;RSQ=0.9616;ERATE=0.0060;THETA=0.0003;AC=989;AN=2184 GT:DS:GL:BD 0.45283884 0
1 24903474 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2508;AVGPOST=0.9969;RSQ=0.9935;ERATE=0.0004;THETA=0.0003;AC=549;AN=2184 GT:DS:GL:BD 0.25137362 0
1 24903585 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9988;RSQ=0.9156;ERATE=0.0004;THETA=0.0067;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 24903608 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6443;ERATE=0.0005;THETA=0.0056;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24903624 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0058;AVGPOST=0.9973;RSQ=0.8136;ERATE=0.0005;THETA=0.0016;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 24903668 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0058;AVGPOST=0.9994;RSQ=0.9526;ERATE=0.0003;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 24903678 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5527;ERATE=0.0005;THETA=0.0028;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24903688 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7587;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24903789 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.769;LDAF=0.0032;AVGPOST=0.9986;RSQ=0.8059;ERATE=0.0005;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24903877 . GAA G 30 PASS INDEL;BAVGPOST=1.000;BRSQ=0.714;LDAF=0.0018;AVGPOST=0.9987;RSQ=0.6713;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24904074 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.764;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4561;ERATE=0.0005;THETA=0.0085;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24904245 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.686;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4912;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24904255 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.977;LDAF=0.7803;AVGPOST=0.9847;RSQ=0.9658;ERATE=0.0040;THETA=0.0014;AC=1705;AN=2184 GT:DS:GL:BD 0.78067768 1
1 24904285 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8260;ERATE=0.0004;THETA=0.0019;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24904309 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.776;LDAF=0.0016;AVGPOST=0.9981;RSQ=0.5740;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24904350 rs111741281 C CG 881 PASS INDEL;BAVGPOST=0.992;BRSQ=0.729;LDAF=0.0129;AVGPOST=0.9880;RSQ=0.6335;ERATE=0.0017;THETA=0.0080;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 24904410 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.981;LDAF=0.4542;AVGPOST=0.9896;RSQ=0.9854;ERATE=0.0006;THETA=0.0003;AC=994;AN=2184 GT:DS:GL:BD 0.45512819 0
1 24904454 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.975;LDAF=0.2865;AVGPOST=0.9895;RSQ=0.9805;ERATE=0.0004;THETA=0.0002;AC=628;AN=2184 GT:DS:GL:BD 0.28754580 0
1 24904461 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.968;LDAF=0.3867;AVGPOST=0.9807;RSQ=0.9700;ERATE=0.0027;THETA=0.0004;AC=844;AN=2184 GT:DS:GL:BD 0.38644689 0
1 24904469 . A AT 174 PASS INDEL;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7205;ERATE=0.0004;THETA=0.0034;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24904512 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0245;AVGPOST=0.9985;RSQ=0.9765;ERATE=0.0004;THETA=0.0096;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 24904600 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.842;LDAF=0.0044;AVGPOST=0.9984;RSQ=0.8674;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 24904898 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.580;LDAF=0.0019;AVGPOST=0.9971;RSQ=0.4540;ERATE=0.0004;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24904916 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.743;LDAF=0.0026;AVGPOST=0.9976;RSQ=0.6015;ERATE=0.0009;THETA=0.0037;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24904960 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0075;AVGPOST=0.9974;RSQ=0.8551;ERATE=0.0004;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 24905013 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.595;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7721;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24905024 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6105;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24905025 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0024;AVGPOST=0.9992;RSQ=0.8571;ERATE=0.0005;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24905043 rs71804550 C CTT 2281 PASS INDEL;BAVGPOST=0.997;BRSQ=0.961;LDAF=0.0383;AVGPOST=0.9936;RSQ=0.9395;ERATE=0.0007;THETA=0.0008;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 24905054 . T TC 1243 PASS INDEL;BAVGPOST=0.988;BRSQ=0.921;LDAF=0.0861;AVGPOST=0.9881;RSQ=0.9417;ERATE=0.0008;THETA=0.0013;AC=185;AN=2184 GT:DS:GL:BD 0.08470696 0
1 24905190 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0143;AVGPOST=0.9961;RSQ=0.8965;ERATE=0.0006;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 24905239 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.2065;AVGPOST=0.9951;RSQ=0.9883;ERATE=0.0004;THETA=0.0005;AC=450;AN=2184 GT:DS:GL:BD 0.20604396 0
1 24905280 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0153;AVGPOST=0.9993;RSQ=0.9800;ERATE=0.0003;THETA=0.0009;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 24905295 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2217;AVGPOST=0.9957;RSQ=0.9906;ERATE=0.0004;THETA=0.0003;AC=483;AN=2184 GT:DS:GL:BD 0.22115384 0
1 24905333 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.5953;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24905335 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0231;AVGPOST=0.9984;RSQ=0.9727;ERATE=0.0004;THETA=0.0004;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 24905374 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7585;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24905402 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7195;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24905509 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.2122;AVGPOST=0.9945;RSQ=0.9874;ERATE=0.0005;THETA=0.0004;AC=461;AN=2184 GT:DS:GL:BD 0.21108058 0
1 24905516 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6057;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24905517 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9580;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 24905545 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.637;LDAF=0.0017;AVGPOST=0.9986;RSQ=0.6804;ERATE=0.0004;THETA=0.0041;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24905562 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0024;AVGPOST=0.9990;RSQ=0.8239;ERATE=0.0004;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24905624 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3725;AVGPOST=0.9968;RSQ=0.9946;ERATE=0.0005;THETA=0.0002;AC=813;AN=2184 GT:DS:GL:BD 0.37225273 0
1 24905645 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.8355;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24905660 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.747;LDAF=0.0041;AVGPOST=0.9971;RSQ=0.7256;ERATE=0.0006;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 24905683 rs66761718 TG T 19989 PASS INDEL;BAVGPOST=0.980;BRSQ=0.962;LDAF=0.3695;AVGPOST=0.9659;RSQ=0.9438;ERATE=0.0075;THETA=0.0003;AC=797;AN=2184 GT:DS:GL:BD 0.36492673 0
1 24905757 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6525;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24905767 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.677;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5687;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24906101 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0348;AVGPOST=0.9994;RSQ=0.9928;ERATE=0.0004;THETA=0.0006;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 24906139 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0093;AVGPOST=0.9989;RSQ=0.9521;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 24906281 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7309;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24906320 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0194;AVGPOST=0.9995;RSQ=0.9904;ERATE=0.0003;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 24906329 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9167;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24906428 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.791;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8286;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24906562 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0354;AVGPOST=0.9981;RSQ=0.9786;ERATE=0.0005;THETA=0.0003;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 24906613 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0055;AVGPOST=0.9968;RSQ=0.7665;ERATE=0.0007;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 24906636 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.790;LDAF=0.0061;AVGPOST=0.9961;RSQ=0.7435;ERATE=0.0011;THETA=0.0017;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 24906676 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0057;AVGPOST=0.9984;RSQ=0.9033;ERATE=0.0005;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 24906677 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0191;AVGPOST=0.9993;RSQ=0.9839;ERATE=0.0003;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 24906711 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.7322;AVGPOST=0.9974;RSQ=0.9945;ERATE=0.0004;THETA=0.0006;AC=1600;AN=2184 GT:DS:GL:BD 0.73260075 1
1 24906718 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3718;AVGPOST=0.9980;RSQ=0.9966;ERATE=0.0003;THETA=0.0002;AC=812;AN=2184 GT:DS:GL:BD 0.37179488 0
1 24906745 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24906799 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5433;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24906810 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.7331;ERATE=0.0004;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24906889 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.764;LDAF=0.0050;AVGPOST=0.9976;RSQ=0.8039;ERATE=0.0004;THETA=0.0032;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 24906925 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0030;AVGPOST=0.9992;RSQ=0.8809;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24906984 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4530;ERATE=0.0006;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24907116 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0029;AVGPOST=0.9973;RSQ=0.6456;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24907147 . T TTG 31 PASS INDEL;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24907193 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.776;LDAF=0.0024;AVGPOST=0.9991;RSQ=0.8483;ERATE=0.0005;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24907197 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7286;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24907242 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.985;LDAF=0.2047;AVGPOST=0.9900;RSQ=0.9763;ERATE=0.0011;THETA=0.0006;AC=446;AN=2184 GT:DS:GL:BD 0.20421246 0
1 24907260 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0049;AVGPOST=0.9994;RSQ=0.9429;ERATE=0.0007;THETA=0.0056;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 24907415 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.7040;AVGPOST=0.9975;RSQ=0.9960;ERATE=0.0004;THETA=0.0113;AC=1538;AN=2184 GT:DS:GL:BD 0.70421243 1
1 24907455 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8233;ERATE=0.0004;THETA=0.0021;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24907501 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.9228;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24907520 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0053;AVGPOST=0.9994;RSQ=0.9508;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 24907543 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1128;AVGPOST=0.9978;RSQ=0.9920;ERATE=0.0003;THETA=0.0036;AC=245;AN=2184 GT:DS:GL:BD 0.11217949 0
1 24907679 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.692;LDAF=0.0050;AVGPOST=0.9973;RSQ=0.7915;ERATE=0.0005;THETA=0.0017;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 24907733 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.952;BRSQ=0.907;LDAF=0.6982;AVGPOST=0.9481;RSQ=0.9132;ERATE=0.0050;THETA=0.0003;AC=1550;AN=2184 GT:DS:GL:BD 0.70970696 1
1 24907735 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.920;LDAF=0.8112;AVGPOST=0.9779;RSQ=0.9492;ERATE=0.0006;THETA=0.0082;AC=1787;AN=2184 GT:DS:GL:BD 0.81822342 1
1 24907844 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.654;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0004;THETA=0.0037;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24907990 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24908070 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24908072 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8608;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24908131 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.804;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8057;ERATE=0.0004;THETA=0.0037;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24908302 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6034;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24908361 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0003;THETA=0.0039;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24908512 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0257;AVGPOST=0.9998;RSQ=0.9962;ERATE=0.0004;THETA=0.0067;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 24908522 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8333;ERATE=0.0003;THETA=0.0047;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24908535 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1517;AVGPOST=0.9986;RSQ=0.9957;ERATE=0.0005;THETA=0.0011;AC=330;AN=2184 GT:DS:GL:BD 0.15109891 0
1 24908619 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.975;LDAF=0.2901;AVGPOST=0.9896;RSQ=0.9836;ERATE=0.0005;THETA=0.0002;AC=633;AN=2184 GT:DS:GL:BD 0.28983516 0
1 24908625 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.975;LDAF=0.2902;AVGPOST=0.9885;RSQ=0.9821;ERATE=0.0005;THETA=0.0062;AC=633;AN=2184 GT:DS:GL:BD 0.28983516 0
1 24908668 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9344;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24908687 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0040;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24908783 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.6696;AVGPOST=0.9962;RSQ=0.9940;ERATE=0.0004;THETA=0.0002;AC=1463;AN=2184 GT:DS:GL:BD 0.66987181 1
1 24908929 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1841;AVGPOST=0.9984;RSQ=0.9961;ERATE=0.0003;THETA=0.0005;AC=400;AN=2184 GT:DS:GL:BD 0.18315019 0
1 24908959 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.987;LDAF=0.3877;AVGPOST=0.9931;RSQ=0.9887;ERATE=0.0012;THETA=0.0003;AC=844;AN=2184 GT:DS:GL:BD 0.38644689 0
1 24908968 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.821;LDAF=0.0027;AVGPOST=0.9993;RSQ=0.9003;ERATE=0.0003;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24909020 . G GA 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7455;ERATE=0.0004;THETA=0.0061;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24909087 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8192;ERATE=0.0005;THETA=0.0035;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24909118 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.8173;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24909139 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8850;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24909182 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0013;AVGPOST=0.9999;RSQ=0.9516;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24909259 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7903;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24909301 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.2001;AVGPOST=0.9963;RSQ=0.9908;ERATE=0.0007;THETA=0.0002;AC=436;AN=2184 GT:DS:GL:BD 0.19963370 0
1 24909308 rs71032829 T TCCTA 30029 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1515;AVGPOST=0.9986;RSQ=0.9959;ERATE=0.0004;THETA=0.0046;AC=330;AN=2184 GT:DS:GL:BD 0.15109891 0
1 24909322 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6083;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24909403 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1131;AVGPOST=0.9992;RSQ=0.9972;ERATE=0.0003;THETA=0.0003;AC=247;AN=2184 GT:DS:GL:BD 0.11309524 0
1 24909445 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.9048;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24909734 . CAG C 26158 PASS INDEL;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2619;AVGPOST=0.9962;RSQ=0.9916;ERATE=0.0012;THETA=0.0004;AC=574;AN=2184 GT:DS:GL:BD 0.26282051 0
1 24909957 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5951;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24910051 . C CA 73 PASS INDEL;BAVGPOST=0.999;BRSQ=0.631;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.7980;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24910075 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.992;LDAF=0.5018;AVGPOST=0.9867;RSQ=0.9803;ERATE=0.0036;THETA=0.0003;AC=1095;AN=2184 GT:DS:GL:BD 0.50137365 1
1 24910076 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5854;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24910146 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0027;AVGPOST=0.9981;RSQ=0.7308;ERATE=0.0007;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24910147 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.6104;ERATE=0.0007;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24910319 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5042;AVGPOST=0.9982;RSQ=0.9970;ERATE=0.0003;THETA=0.0003;AC=1102;AN=2184 GT:DS:GL:BD 0.50457877 1
1 24910331 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.731;LDAF=0.0066;AVGPOST=0.9979;RSQ=0.8600;ERATE=0.0005;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 24910421 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6200;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24910430 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6465;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24910507 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8526;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24910646 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7286;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24910667 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0067;AVGPOST=0.9989;RSQ=0.9376;ERATE=0.0005;THETA=0.0001;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 24910687 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.666;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6234;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24910794 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6265;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24910928 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6902;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24910972 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24911092 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.854;LDAF=0.0055;AVGPOST=0.9989;RSQ=0.9123;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 24911093 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.712;LDAF=0.0069;AVGPOST=0.9973;RSQ=0.8423;ERATE=0.0006;THETA=0.0012;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 24911214 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0323;AVGPOST=0.9980;RSQ=0.9748;ERATE=0.0004;THETA=0.0002;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 24911291 . G GT 93 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0060;AVGPOST=0.9959;RSQ=0.7124;ERATE=0.0006;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 24911320 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0057;AVGPOST=0.9986;RSQ=0.8875;ERATE=0.0005;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 24911482 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.953;LDAF=0.4881;AVGPOST=0.9667;RSQ=0.9494;ERATE=0.0039;THETA=0.0004;AC=1078;AN=2184 GT:DS:GL:BD 0.49358973 0
1 24911611 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0062;AVGPOST=0.9995;RSQ=0.9666;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 24911682 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6872;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24911755 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24911760 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24911822 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24912059 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.7759;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24912080 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.4788;AVGPOST=0.9965;RSQ=0.9945;ERATE=0.0004;THETA=0.0003;AC=1045;AN=2184 GT:DS:GL:BD 0.47847986 0
1 24912170 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0208;AVGPOST=0.9993;RSQ=0.9839;ERATE=0.0004;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 24912374 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8916;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24912469 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0820;AVGPOST=0.9991;RSQ=0.9957;ERATE=0.0003;THETA=0.0004;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 24912514 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8839;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24912528 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.754;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24912533 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8314;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24912534 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24912648 . AG A 77 PASS INDEL;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0017;AVGPOST=0.9976;RSQ=0.3437;ERATE=0.0007;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24912710 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.960;LDAF=0.0289;AVGPOST=0.9981;RSQ=0.9733;ERATE=0.0003;THETA=0.0003;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 24912772 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6343;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24912791 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24912884 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.1881;AVGPOST=0.9977;RSQ=0.9946;ERATE=0.0005;THETA=0.0005;AC=410;AN=2184 GT:DS:GL:BD 0.18772894 0
1 24912918 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24912933 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24912962 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.747;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7770;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24913017 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.695;LDAF=0.0026;AVGPOST=0.9980;RSQ=0.6684;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24913023 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0030;AVGPOST=0.9966;RSQ=0.5587;ERATE=0.0005;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24913029 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0848;AVGPOST=0.9989;RSQ=0.9935;ERATE=0.0004;THETA=0.0017;AC=184;AN=2184 GT:DS:GL:BD 0.08424909 0
1 24913077 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8473;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24913087 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.0441;AVGPOST=0.9984;RSQ=0.9877;ERATE=0.0003;THETA=0.0007;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 24913110 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.780;LDAF=0.0020;AVGPOST=0.9972;RSQ=0.5301;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24913147 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5910;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24913184 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0030;AVGPOST=0.9970;RSQ=0.5892;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24913228 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.3443;AVGPOST=0.9904;RSQ=0.9824;ERATE=0.0022;THETA=0.0002;AC=749;AN=2184 GT:DS:GL:BD 0.34294870 0
1 24913238 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=0.9964;RSQ=0.8159;ERATE=0.0006;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 24913340 rs112689334 TG T 6766 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0405;AVGPOST=0.9991;RSQ=0.9913;ERATE=0.0003;THETA=0.0003;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 24913421 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24913463 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8005;AVGPOST=0.9995;RSQ=0.9985;ERATE=0.0003;THETA=0.0004;AC=1749;AN=2184 GT:DS:GL:BD 0.80082417 1
1 24913468 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24913555 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24913740 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0239;AVGPOST=0.9998;RSQ=0.9958;ERATE=0.0003;THETA=0.0002;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 24913828 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9871;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 24913895 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0061;AVGPOST=0.9989;RSQ=0.9351;ERATE=0.0004;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 24913972 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.1484;AVGPOST=0.9995;RSQ=0.9984;ERATE=0.0003;THETA=0.0004;AC=324;AN=2184 GT:DS:GL:BD 0.14835165 0
1 24914032 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.981;LDAF=0.6484;AVGPOST=0.9896;RSQ=0.9840;ERATE=0.0021;THETA=0.0004;AC=1423;AN=2184 GT:DS:GL:BD 0.65155679 1
1 24914079 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.2068;AVGPOST=0.9985;RSQ=0.9956;ERATE=0.0005;THETA=0.0004;AC=452;AN=2184 GT:DS:GL:BD 0.20695971 0
1 24914153 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8247;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24914157 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.674;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5369;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24914196 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4446;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24914240 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.675;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8495;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24914350 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24914448 . A AT 42 PASS INDEL;BAVGPOST=0.989;BRSQ=0.612;LDAF=0.0216;AVGPOST=0.9730;RSQ=0.4953;ERATE=0.0058;THETA=0.0002;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 24914476 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0404;AVGPOST=0.9993;RSQ=0.9931;ERATE=0.0004;THETA=0.0002;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 24914507 . GA G 583 PASS INDEL;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0045;AVGPOST=0.9992;RSQ=0.9250;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 24914545 . AC A 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5492;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24914567 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.5668;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24914679 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1888;AVGPOST=0.9983;RSQ=0.9954;ERATE=0.0005;THETA=0.0003;AC=412;AN=2184 GT:DS:GL:BD 0.18864469 0
1 24914832 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6343;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24914933 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24914951 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24915075 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0025;AVGPOST=0.9985;RSQ=0.7607;ERATE=0.0004;THETA=0.0019;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24915166 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5624;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24915248 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1286;AVGPOST=0.9995;RSQ=0.9981;ERATE=0.0003;THETA=0.0003;AC=280;AN=2184 GT:DS:GL:BD 0.12820514 0
1 24915276 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6464;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24915393 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4839;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24915470 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6343;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24915669 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0021;AVGPOST=0.9982;RSQ=0.6753;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24915682 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6589;ERATE=0.0005;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24915757 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0070;AVGPOST=0.9996;RSQ=0.9750;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 24915781 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.4133;AVGPOST=0.9934;RSQ=0.9885;ERATE=0.0023;THETA=0.0003;AC=902;AN=2184 GT:DS:GL:BD 0.41300365 0
1 24915799 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.816;LDAF=0.0113;AVGPOST=0.9984;RSQ=0.9515;ERATE=0.0004;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 24915813 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.753;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6965;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24915929 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24915947 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6495;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24915984 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4163;AVGPOST=0.9965;RSQ=0.9946;ERATE=0.0008;THETA=0.0006;AC=911;AN=2184 GT:DS:GL:BD 0.41712454 0
1 24916126 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8745;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24916220 . A AG 111 PASS INDEL;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0039;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24916225 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.854;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.7858;ERATE=0.0003;THETA=0.0031;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24916230 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6776;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24916309 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9996;RSQ=0.9701;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 24916423 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.976;LDAF=0.1726;AVGPOST=0.9968;RSQ=0.9911;ERATE=0.0007;THETA=0.0017;AC=378;AN=2184 GT:DS:GL:BD 0.17307693 0
1 24916437 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7151;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24916491 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0062;AVGPOST=0.9995;RSQ=0.9576;ERATE=0.0004;THETA=0.0017;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 24916537 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.786;LDAF=0.0019;AVGPOST=0.9993;RSQ=0.8459;ERATE=0.0003;THETA=0.0016;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24916725 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6978;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24916752 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24916854 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0070;AVGPOST=0.9997;RSQ=0.9820;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 24917251 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8669;ERATE=0.0005;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24917361 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0094;AVGPOST=0.9995;RSQ=0.9781;ERATE=0.0003;THETA=0.0013;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 24917363 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2949;AVGPOST=0.9961;RSQ=0.9929;ERATE=0.0005;THETA=0.0002;AC=643;AN=2184 GT:DS:GL:BD 0.29441392 0
1 24917374 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5467;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24917410 . AT A 40 PASS INDEL;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24917456 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.0939;AVGPOST=0.9978;RSQ=0.9892;ERATE=0.0004;THETA=0.0005;AC=205;AN=2184 GT:DS:GL:BD 0.09386447 0
1 24917479 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.854;LDAF=0.0024;AVGPOST=0.9984;RSQ=0.7791;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24917496 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9734;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24917522 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9359;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24917543 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.4978;AVGPOST=0.9978;RSQ=0.9967;ERATE=0.0003;THETA=0.0007;AC=1087;AN=2184 GT:DS:GL:BD 0.49771062 0
1 24917544 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.769;LDAF=0.0031;AVGPOST=0.9996;RSQ=0.9401;ERATE=0.0004;THETA=0.0022;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24917553 . AG A 16339 PASS INDEL;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1922;AVGPOST=0.9972;RSQ=0.9924;ERATE=0.0004;THETA=0.0006;AC=419;AN=2184 GT:DS:GL:BD 0.19184981 0
1 24917596 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6497;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24917624 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0427;AVGPOST=0.9995;RSQ=0.9946;ERATE=0.0003;THETA=0.0049;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 24917745 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9914;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 24917873 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.953;LDAF=0.0300;AVGPOST=0.9989;RSQ=0.9854;ERATE=0.0004;THETA=0.0006;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 24917880 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7494;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24917903 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0070;AVGPOST=0.9997;RSQ=0.9782;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 24918006 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0172;AVGPOST=0.9990;RSQ=0.9736;ERATE=0.0005;THETA=0.0004;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 24918060 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0032;AVGPOST=0.9985;RSQ=0.8172;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24918096 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6465;ERATE=0.0004;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24918130 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.458;LDAF=0.0043;AVGPOST=0.9936;RSQ=0.4073;ERATE=0.0012;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24918203 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0239;AVGPOST=0.9977;RSQ=0.9640;ERATE=0.0004;THETA=0.0002;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 24918510 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.598;LDAF=0.0020;AVGPOST=0.9977;RSQ=0.5597;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24918570 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0101;AVGPOST=0.9984;RSQ=0.9478;ERATE=0.0004;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 24918650 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0022;AVGPOST=0.9991;RSQ=0.8328;ERATE=0.0005;THETA=0.0076;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24918735 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.2052;AVGPOST=0.9981;RSQ=0.9946;ERATE=0.0005;THETA=0.0005;AC=449;AN=2184 GT:DS:GL:BD 0.20558608 0
1 24918736 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9785;ERATE=0.0003;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 24918739 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9607;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24918836 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.833;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8402;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24918855 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.983;LDAF=0.0899;AVGPOST=0.9975;RSQ=0.9885;ERATE=0.0005;THETA=0.0003;AC=197;AN=2184 GT:DS:GL:BD 0.09020147 0
1 24919114 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.528;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5212;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24919123 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.5239;AVGPOST=0.9941;RSQ=0.9896;ERATE=0.0011;THETA=0.0002;AC=1144;AN=2184 GT:DS:GL:BD 0.52380955 1
1 24919135 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.440;LDAF=0.0021;AVGPOST=0.9977;RSQ=0.5394;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24919236 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.952;LDAF=0.0206;AVGPOST=0.9957;RSQ=0.9287;ERATE=0.0004;THETA=0.0002;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 24919303 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.490;LDAF=0.0268;AVGPOST=0.9700;RSQ=0.5415;ERATE=0.0007;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 24919326 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.980;LDAF=0.2467;AVGPOST=0.9840;RSQ=0.9678;ERATE=0.0006;THETA=0.0004;AC=534;AN=2184 GT:DS:GL:BD 0.24450549 0
1 24919335 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0043;AVGPOST=0.9969;RSQ=0.7073;ERATE=0.0007;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24919345 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.610;LDAF=0.0031;AVGPOST=0.9958;RSQ=0.4671;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24919389 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.590;LDAF=0.0035;AVGPOST=0.9960;RSQ=0.5222;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24919414 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0162;AVGPOST=0.9968;RSQ=0.9214;ERATE=0.0005;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 24919519 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.923;LDAF=0.0158;AVGPOST=0.9968;RSQ=0.9261;ERATE=0.0003;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 24919577 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2462;AVGPOST=0.9952;RSQ=0.9893;ERATE=0.0008;THETA=0.0005;AC=535;AN=2184 GT:DS:GL:BD 0.24496336 0
1 24919735 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0072;AVGPOST=0.9986;RSQ=0.9259;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 24919946 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.983;LDAF=0.2267;AVGPOST=0.9960;RSQ=0.9896;ERATE=0.0006;THETA=0.0003;AC=494;AN=2184 GT:DS:GL:BD 0.22619048 0
1 24920055 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8545;ERATE=0.0005;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24920237 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4968;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24920277 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0020;AVGPOST=0.9978;RSQ=0.5225;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24920414 . ACT A 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6512;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24920526 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.923;LDAF=0.2028;AVGPOST=0.9896;RSQ=0.9733;ERATE=0.0010;THETA=0.0002;AC=436;AN=2184 GT:DS:GL:BD 0.19963370 0
1 24920529 . CCCA C 5391 PASS INDEL;BAVGPOST=0.869;BRSQ=0.627;LDAF=0.1933;AVGPOST=0.9028;RSQ=0.7913;ERATE=0.0032;THETA=0.0003;AC=432;AN=2184 GT:DS:GL:BD 0.19780220 0
1 24920660 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24920718 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.4619;AVGPOST=0.9973;RSQ=0.9961;ERATE=0.0004;THETA=0.0002;AC=1010;AN=2184 GT:DS:GL:BD 0.46245420 0
1 24920739 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.7650;AVGPOST=0.9982;RSQ=0.9959;ERATE=0.0004;THETA=0.0003;AC=1670;AN=2184 GT:DS:GL:BD 0.76465201 1
1 24920834 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.857;LDAF=0.0085;AVGPOST=0.9977;RSQ=0.8742;ERATE=0.0004;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 24920878 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8776;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24920981 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2496;AVGPOST=0.9972;RSQ=0.9942;ERATE=0.0005;THETA=0.0014;AC=544;AN=2184 GT:DS:GL:BD 0.24908425 0
1 24921047 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0055;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0001;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 24921156 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8454;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24921159 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7304;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24921314 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0034;AVGPOST=0.9973;RSQ=0.6791;ERATE=0.0009;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24921348 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2627;AVGPOST=0.9978;RSQ=0.9950;ERATE=0.0006;THETA=0.0004;AC=574;AN=2184 GT:DS:GL:BD 0.26282051 0
1 24921366 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0027;AVGPOST=0.9993;RSQ=0.8714;ERATE=0.0005;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24921390 . A AT 33 PASS INDEL;BAVGPOST=0.998;BRSQ=0.332;LDAF=0.0032;AVGPOST=0.9953;RSQ=0.4067;ERATE=0.0010;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24921496 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.821;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8561;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24921501 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4765;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24921574 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0052;AVGPOST=0.9997;RSQ=0.9708;ERATE=0.0003;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 24921665 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0056;AVGPOST=0.9991;RSQ=0.9355;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 24921728 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24921732 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0023;AVGPOST=0.9995;RSQ=0.8995;ERATE=0.0009;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24921734 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24921750 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24921758 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2196;AVGPOST=0.9992;RSQ=0.9981;ERATE=0.0003;THETA=0.0004;AC=481;AN=2184 GT:DS:GL:BD 0.22023809 0
1 24921953 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24921996 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24922029 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24922039 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24922044 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24922056 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2000;AVGPOST=0.9996;RSQ=0.9991;ERATE=0.0003;THETA=0.0001;AC=438;AN=2184 GT:DS:GL:BD 0.20054945 0
1 24922057 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24922066 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24922129 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4738;AVGPOST=0.9993;RSQ=0.9989;ERATE=0.0004;THETA=0.0033;AC=1035;AN=2184 GT:DS:GL:BD 0.47390109 0
1 24922243 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0003;THETA=0.0048;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24922446 rs34862964 TA T 41548 PASS INDEL;BAVGPOST=0.986;BRSQ=0.974;LDAF=0.4679;AVGPOST=0.9887;RSQ=0.9835;ERATE=0.0005;THETA=0.0006;AC=1024;AN=2184 GT:DS:GL:BD 0.46886447 0
1 24922448 . AC A 7863 PASS INDEL;BAVGPOST=0.968;BRSQ=0.941;LDAF=0.4520;AVGPOST=0.9628;RSQ=0.9449;ERATE=0.0040;THETA=0.0003;AC=998;AN=2184 GT:DS:GL:BD 0.45695969 0
1 24922647 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0037;AVGPOST=0.9995;RSQ=0.9359;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 24922687 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8748;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24923019 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0115;AVGPOST=0.9985;RSQ=0.9583;ERATE=0.0003;THETA=0.0040;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 24923070 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0074;AVGPOST=0.9995;RSQ=0.9707;ERATE=0.0003;THETA=0.0139;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 24923091 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.682;LDAF=0.0027;AVGPOST=0.9980;RSQ=0.6663;ERATE=0.0007;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24923117 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.609;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6904;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24923201 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24923253 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5835;ERATE=0.0003;THETA=0.0056;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24923280 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0213;AVGPOST=0.9983;RSQ=0.9707;ERATE=0.0003;THETA=0.0013;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 24923381 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5369;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24923418 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9827;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 24923554 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.707;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0048;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24923692 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.684;LDAF=0.0037;AVGPOST=0.9984;RSQ=0.8390;ERATE=0.0003;THETA=0.0038;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 24923804 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0020;AVGPOST=0.9978;RSQ=0.6226;ERATE=0.0003;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24924010 . AGG A 476 PASS INDEL;BAVGPOST=0.634;BRSQ=0.082;LDAF=0.2411;AVGPOST=0.6910;RSQ=0.3008;ERATE=0.0180;THETA=0.0011;AC=311;AN=2184 GT:DS:GL:BD 0.14239927 0
1 24924018 . G GA 770 PASS INDEL;BAVGPOST=0.686;BRSQ=0.105;LDAF=0.1990;AVGPOST=0.7461;RSQ=0.3584;ERATE=0.0183;THETA=0.0010;AC=238;AN=2184 GT:DS:GL:BD 0.10897436 0
1 24924022 . A AG 88 PASS INDEL;BAVGPOST=0.643;BRSQ=0.038;LDAF=0.2447;AVGPOST=0.6762;RSQ=0.2611;ERATE=0.0209;THETA=0.0014;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 24924026 . GGA G 134 PASS INDEL;BAVGPOST=0.722;BRSQ=0.113;LDAF=0.1748;AVGPOST=0.7543;RSQ=0.2942;ERATE=0.0175;THETA=0.0033;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 24924027 . GA G 237 PASS INDEL;BAVGPOST=0.702;BRSQ=0.118;LDAF=0.2529;AVGPOST=0.6770;RSQ=0.2908;ERATE=0.0228;THETA=0.0016;AC=316;AN=2184 GT:DS:GL:BD 0.14468865 0
1 24924028 . A AG 153 PASS INDEL;BAVGPOST=0.746;BRSQ=0.062;LDAF=0.1678;AVGPOST=0.7582;RSQ=0.2647;ERATE=0.0179;THETA=0.0021;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 24924033 . GA G 32 PASS INDEL;BAVGPOST=0.846;BRSQ=0.041;LDAF=0.1769;AVGPOST=0.7290;RSQ=0.2226;ERATE=0.0215;THETA=0.0025;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 24924072 . A AAAAG 10004 PASS INDEL;BAVGPOST=0.860;BRSQ=0.668;LDAF=0.2540;AVGPOST=0.8811;RSQ=0.7739;ERATE=0.0019;THETA=0.0005;AC=569;AN=2184 GT:DS:GL:BD 0.26053113 0
1 24924077 . AG A 168 PASS INDEL;BAVGPOST=0.959;BRSQ=0.384;LDAF=0.0514;AVGPOST=0.9533;RSQ=0.6210;ERATE=0.0025;THETA=0.0024;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 24924085 . GAAGA G 1377 PASS INDEL;BAVGPOST=0.958;BRSQ=0.611;LDAF=0.0896;AVGPOST=0.9234;RSQ=0.6299;ERATE=0.0081;THETA=0.0011;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 24924112 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.860;BRSQ=0.603;LDAF=0.2296;AVGPOST=0.8479;RSQ=0.6514;ERATE=0.0246;THETA=0.0060;AC=434;AN=2184 GT:DS:GL:BD 0.19871795 0
1 24924119 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.460;LDAF=0.0108;AVGPOST=0.9873;RSQ=0.5278;ERATE=0.0010;THETA=0.0023;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 24924130 rs60700101 G GA 30 PASS INDEL;BAVGPOST=0.997;BRSQ=0.379;LDAF=0.0117;AVGPOST=0.9830;RSQ=0.4100;ERATE=0.0014;THETA=0.0023;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 24924142 . G GA 1558 PASS INDEL;BAVGPOST=0.947;BRSQ=0.627;LDAF=0.0910;AVGPOST=0.9427;RSQ=0.7359;ERATE=0.0004;THETA=0.0004;AC=162;AN=2184 GT:DS:GL:BD 0.07417583 0
1 24924144 . AAG A 594 PASS INDEL;BAVGPOST=0.945;BRSQ=0.626;LDAF=0.1154;AVGPOST=0.9090;RSQ=0.6405;ERATE=0.0050;THETA=0.0008;AC=194;AN=2184 GT:DS:GL:BD 0.08882784 0
1 24924158 . G GA 523 PASS INDEL;BAVGPOST=0.841;BRSQ=0.298;LDAF=0.2043;AVGPOST=0.7507;RSQ=0.3437;ERATE=0.0316;THETA=0.0039;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 24924160 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.418;LDAF=0.0058;AVGPOST=0.9952;RSQ=0.6267;ERATE=0.0009;THETA=0.0011;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 24924171 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.937;BRSQ=0.731;LDAF=0.1599;AVGPOST=0.9057;RSQ=0.7097;ERATE=0.0103;THETA=0.0043;AC=288;AN=2184 GT:DS:GL:BD 0.13186814 0
1 24924180 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.957;BRSQ=0.794;LDAF=0.1187;AVGPOST=0.9461;RSQ=0.7999;ERATE=0.0006;THETA=0.0006;AC=225;AN=2184 GT:DS:GL:BD 0.10302198 0
1 24924194 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.731;LDAF=0.0650;AVGPOST=0.9558;RSQ=0.7159;ERATE=0.0113;THETA=0.0016;AC=114;AN=2184 GT:DS:GL:BD 0.05219780 0
1 24924223 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.745;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8361;ERATE=0.0004;THETA=0.0023;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24924233 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.955;LDAF=0.0376;AVGPOST=0.9970;RSQ=0.9660;ERATE=0.0004;THETA=0.0007;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 24924236 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.955;LDAF=0.0387;AVGPOST=0.9969;RSQ=0.9674;ERATE=0.0005;THETA=0.0044;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 24924309 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9215;ERATE=0.0003;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24924311 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.987;LDAF=0.5966;AVGPOST=0.9826;RSQ=0.9721;ERATE=0.0010;THETA=0.0006;AC=1303;AN=2184 GT:DS:GL:BD 0.59661174 1
1 24924369 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.863;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9403;ERATE=0.0003;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24924455 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.803;LDAF=0.0034;AVGPOST=0.9987;RSQ=0.8355;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24924461 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6105;ERATE=0.0003;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24924480 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0374;AVGPOST=0.9987;RSQ=0.9850;ERATE=0.0005;THETA=0.0004;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 24924529 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0372;AVGPOST=0.9993;RSQ=0.9927;ERATE=0.0003;THETA=0.0059;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 24924592 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0375;AVGPOST=0.9998;RSQ=0.9976;ERATE=0.0003;THETA=0.0011;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 24924686 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7635;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24924701 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0377;AVGPOST=0.9994;RSQ=0.9924;ERATE=0.0004;THETA=0.0008;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 24924702 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7966;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24924716 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0376;AVGPOST=0.9996;RSQ=0.9952;ERATE=0.0003;THETA=0.0005;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 24924778 rs55652135 TG T 18263 PASS INDEL;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.2030;AVGPOST=0.9906;RSQ=0.9778;ERATE=0.0005;THETA=0.0004;AC=443;AN=2184 GT:DS:GL:BD 0.20283882 0
1 24924798 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6359;ERATE=0.0004;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24924810 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0015;AVGPOST=0.9990;RSQ=0.7313;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24924824 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0038;AVGPOST=0.9995;RSQ=0.9314;ERATE=0.0004;THETA=0.0080;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 24924894 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0379;AVGPOST=0.9994;RSQ=0.9922;ERATE=0.0003;THETA=0.0013;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 24924895 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.648;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8292;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24924896 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0120;AVGPOST=0.9982;RSQ=0.9476;ERATE=0.0004;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 24924937 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.819;LDAF=0.0058;AVGPOST=0.9974;RSQ=0.8136;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 24924951 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0005;AVGPOST=0.9993;RSQ=0.4903;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24925348 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.496;LDAF=0.0056;AVGPOST=0.9915;RSQ=0.4613;ERATE=0.0006;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 24925409 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.760;LDAF=0.0135;AVGPOST=0.9952;RSQ=0.8625;ERATE=0.0007;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 24925419 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0380;AVGPOST=0.9987;RSQ=0.9840;ERATE=0.0004;THETA=0.0029;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 24925441 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.978;LDAF=0.0379;AVGPOST=0.9988;RSQ=0.9868;ERATE=0.0003;THETA=0.0007;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 24925464 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.978;LDAF=0.0375;AVGPOST=0.9996;RSQ=0.9952;ERATE=0.0003;THETA=0.0006;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 24925493 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.635;LDAF=0.0066;AVGPOST=0.9963;RSQ=0.7818;ERATE=0.0004;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 24925599 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0398;AVGPOST=0.9963;RSQ=0.9612;ERATE=0.0006;THETA=0.0008;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 24925719 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.446;LDAF=0.0042;AVGPOST=0.9950;RSQ=0.5041;ERATE=0.0007;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24925731 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.826;LDAF=0.0168;AVGPOST=0.9947;RSQ=0.8779;ERATE=0.0007;THETA=0.0014;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 24925833 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0362;AVGPOST=0.9973;RSQ=0.9691;ERATE=0.0004;THETA=0.0032;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 24925868 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2711;AVGPOST=0.9957;RSQ=0.9912;ERATE=0.0004;THETA=0.0010;AC=591;AN=2184 GT:DS:GL:BD 0.27060440 0
1 24925882 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.810;LDAF=0.0161;AVGPOST=0.9940;RSQ=0.8706;ERATE=0.0003;THETA=0.0037;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 24925907 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7490;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24925911 rs61464183 A AAAC 4736 PASS INDEL;BAVGPOST=0.998;BRSQ=0.976;LDAF=0.0374;AVGPOST=0.9990;RSQ=0.9884;ERATE=0.0004;THETA=0.0005;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 24926044 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.833;LDAF=0.0043;AVGPOST=0.9988;RSQ=0.8772;ERATE=0.0006;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 24926109 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.586;LDAF=0.0114;AVGPOST=0.9900;RSQ=0.6832;ERATE=0.0006;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 24926131 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.532;LDAF=0.0064;AVGPOST=0.9901;RSQ=0.4382;ERATE=0.0011;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 24926132 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.519;LDAF=0.0071;AVGPOST=0.9906;RSQ=0.4424;ERATE=0.0010;THETA=0.0020;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 24926216 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.965;BRSQ=0.917;LDAF=0.7266;AVGPOST=0.9841;RSQ=0.9696;ERATE=0.0008;THETA=0.0004;AC=1592;AN=2184 GT:DS:GL:BD 0.72893775 1
1 24926266 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.896;BRSQ=0.768;LDAF=0.2901;AVGPOST=0.8706;RSQ=0.7607;ERATE=0.0107;THETA=0.0009;AC=638;AN=2184 GT:DS:GL:BD 0.29212454 0
1 24926325 rs60403359 C CG 332 PASS INDEL;BAVGPOST=0.876;BRSQ=0.245;LDAF=0.1791;AVGPOST=0.7841;RSQ=0.4295;ERATE=0.0132;THETA=0.0003;AC=292;AN=2184 GT:DS:GL:BD 0.13369964 0
1 24926380 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0415;AVGPOST=0.9932;RSQ=0.9277;ERATE=0.0010;THETA=0.0005;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 24926447 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.3075;AVGPOST=0.9920;RSQ=0.9839;ERATE=0.0012;THETA=0.0007;AC=672;AN=2184 GT:DS:GL:BD 0.30769232 0
1 24926454 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.671;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5165;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24926497 . T TA 50 PASS INDEL;BAVGPOST=0.946;BRSQ=0.210;LDAF=0.0231;AVGPOST=0.9654;RSQ=0.3995;ERATE=0.0020;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 24926516 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0369;AVGPOST=0.9989;RSQ=0.9867;ERATE=0.0004;THETA=0.0005;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 24926665 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24926800 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.818;LDAF=0.0139;AVGPOST=0.9967;RSQ=0.9047;ERATE=0.0004;THETA=0.0013;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 24926804 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6105;ERATE=0.0003;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24926835 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0375;AVGPOST=0.9993;RSQ=0.9911;ERATE=0.0003;THETA=0.0041;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 24926872 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0366;AVGPOST=0.9995;RSQ=0.9940;ERATE=0.0004;THETA=0.0005;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 24926884 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7059;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24926886 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24926893 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2005;AVGPOST=0.9995;RSQ=0.9984;ERATE=0.0003;THETA=0.0003;AC=437;AN=2184 GT:DS:GL:BD 0.20009157 0
1 24926990 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3537;AVGPOST=0.9989;RSQ=0.9978;ERATE=0.0005;THETA=0.0003;AC=773;AN=2184 GT:DS:GL:BD 0.35393772 0
1 24927001 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2007;AVGPOST=0.9996;RSQ=0.9989;ERATE=0.0003;THETA=0.0003;AC=437;AN=2184 GT:DS:GL:BD 0.20009157 0
1 24927003 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.939;LDAF=0.0098;AVGPOST=0.9989;RSQ=0.9603;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 24927028 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0366;AVGPOST=0.9999;RSQ=0.9982;ERATE=0.0003;THETA=0.0003;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 24927034 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0363;AVGPOST=0.9991;RSQ=0.9898;ERATE=0.0003;THETA=0.0006;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 24927248 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9228;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24927370 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0016;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24927398 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0037;AVGPOST=1.0000;RSQ=0.9941;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 24927454 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24927561 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5457;AVGPOST=0.9999;RSQ=0.9997;ERATE=0.0003;THETA=0.0002;AC=1191;AN=2184 GT:DS:GL:BD 0.54532969 1
1 24927625 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2008;AVGPOST=0.9996;RSQ=0.9989;ERATE=0.0003;THETA=0.0012;AC=437;AN=2184 GT:DS:GL:BD 0.20009157 0
1 24927727 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.3160;AVGPOST=0.9936;RSQ=0.9892;ERATE=0.0003;THETA=0.0003;AC=689;AN=2184 GT:DS:GL:BD 0.31547618 0
1 24927731 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3513;AVGPOST=0.9992;RSQ=0.9985;ERATE=0.0003;THETA=0.0002;AC=768;AN=2184 GT:DS:GL:BD 0.35164836 0
1 24927776 . ATTTG A 169 PASS INDEL;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6672;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24927936 . AAG A 455 PASS INDEL;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6746;ERATE=0.0007;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24927939 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8116;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24927971 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.727;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5281;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24928052 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0454;AVGPOST=0.9996;RSQ=0.9960;ERATE=0.0003;THETA=0.0005;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 24928118 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0366;AVGPOST=0.9999;RSQ=0.9981;ERATE=0.0003;THETA=0.0005;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 24928166 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24928311 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.900;LDAF=0.0418;AVGPOST=0.9951;RSQ=0.9614;ERATE=0.0004;THETA=0.0007;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 24928313 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.729;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5970;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24928321 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.585;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4911;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24928347 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0380;AVGPOST=0.9980;RSQ=0.9792;ERATE=0.0004;THETA=0.0004;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 24928376 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.947;LDAF=0.0441;AVGPOST=0.9948;RSQ=0.9601;ERATE=0.0005;THETA=0.0004;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 24928397 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.654;LDAF=0.0148;AVGPOST=0.9893;RSQ=0.7504;ERATE=0.0008;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 24928424 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.644;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6180;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24928428 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0369;AVGPOST=0.9944;RSQ=0.9342;ERATE=0.0007;THETA=0.0008;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 24928521 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.872;LDAF=0.0451;AVGPOST=0.9956;RSQ=0.9610;ERATE=0.0007;THETA=0.0004;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 24928555 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.747;LDAF=0.0020;AVGPOST=0.9981;RSQ=0.6105;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24928595 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0456;AVGPOST=0.9993;RSQ=0.9939;ERATE=0.0003;THETA=0.0005;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 24928625 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24928645 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.952;LDAF=0.0177;AVGPOST=0.9985;RSQ=0.9671;ERATE=0.0004;THETA=0.0005;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 24928693 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0453;AVGPOST=0.9996;RSQ=0.9966;ERATE=0.0003;THETA=0.0004;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 24928721 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.777;LDAF=0.0064;AVGPOST=0.9979;RSQ=0.8721;ERATE=0.0004;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 24928777 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0008;AVGPOST=0.9989;RSQ=0.3936;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24928929 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.685;BRSQ=0.335;LDAF=0.2415;AVGPOST=0.7440;RSQ=0.4503;ERATE=0.0171;THETA=0.0004;AC=395;AN=2184 GT:DS:GL:BD 0.18086080 0
1 24928988 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.924;BRSQ=0.817;LDAF=0.2719;AVGPOST=0.9514;RSQ=0.9079;ERATE=0.0019;THETA=0.0008;AC=589;AN=2184 GT:DS:GL:BD 0.26968864 0
1 24929272 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0472;AVGPOST=0.9960;RSQ=0.9675;ERATE=0.0007;THETA=0.0039;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 24929285 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0466;AVGPOST=0.9973;RSQ=0.9783;ERATE=0.0006;THETA=0.0003;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 24929363 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.976;LDAF=0.0455;AVGPOST=0.9989;RSQ=0.9896;ERATE=0.0004;THETA=0.0007;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 24929462 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.483;LDAF=0.0120;AVGPOST=0.9920;RSQ=0.7347;ERATE=0.0005;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 24929550 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.634;LDAF=0.0069;AVGPOST=0.9982;RSQ=0.8924;ERATE=0.0004;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 24929593 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0463;AVGPOST=0.9988;RSQ=0.9888;ERATE=0.0004;THETA=0.0008;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 24929643 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0367;AVGPOST=0.9994;RSQ=0.9900;ERATE=0.0004;THETA=0.0005;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 24929671 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0016;AVGPOST=0.9974;RSQ=0.3207;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24929676 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5908;AVGPOST=0.9936;RSQ=0.9879;ERATE=0.0009;THETA=0.0013;AC=1288;AN=2184 GT:DS:GL:BD 0.58974361 1
1 24929701 rs55950272 A AT 2065 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0375;AVGPOST=0.9977;RSQ=0.9745;ERATE=0.0004;THETA=0.0007;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 24929713 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0467;AVGPOST=0.9965;RSQ=0.9741;ERATE=0.0004;THETA=0.0002;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 24929722 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.875;LDAF=0.0093;AVGPOST=0.9982;RSQ=0.9227;ERATE=0.0004;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 24929743 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.982;LDAF=0.0450;AVGPOST=0.9990;RSQ=0.9922;ERATE=0.0004;THETA=0.0014;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 24929766 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.982;LDAF=0.0455;AVGPOST=0.9984;RSQ=0.9870;ERATE=0.0003;THETA=0.0010;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 24929774 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0455;AVGPOST=0.9992;RSQ=0.9927;ERATE=0.0003;THETA=0.0004;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 24929828 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0459;AVGPOST=0.9982;RSQ=0.9842;ERATE=0.0004;THETA=0.0006;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 24929830 rs57971259 GTAA G 3180 PASS INDEL;BAVGPOST=0.992;BRSQ=0.925;LDAF=0.0548;AVGPOST=0.9784;RSQ=0.8511;ERATE=0.0023;THETA=0.0004;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 24929855 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.985;LDAF=0.5821;AVGPOST=0.9711;RSQ=0.9525;ERATE=0.0055;THETA=0.0004;AC=1271;AN=2184 GT:DS:GL:BD 0.58195972 1
1 24929861 . T TA 754 PASS INDEL;BAVGPOST=0.995;BRSQ=0.954;LDAF=0.0513;AVGPOST=0.9878;RSQ=0.9065;ERATE=0.0031;THETA=0.0006;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 24929862 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.429;LDAF=0.0020;AVGPOST=0.9968;RSQ=0.3682;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24929869 . A AG 6706 PASS INDEL;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0455;AVGPOST=0.9995;RSQ=0.9951;ERATE=0.0004;THETA=0.0005;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 24929925 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.982;LDAF=0.0455;AVGPOST=0.9979;RSQ=0.9847;ERATE=0.0004;THETA=0.0005;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 24930024 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0451;AVGPOST=0.9994;RSQ=0.9949;ERATE=0.0003;THETA=0.0004;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 24930114 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0453;AVGPOST=0.9995;RSQ=0.9956;ERATE=0.0004;THETA=0.0007;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 24930242 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.686;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.7357;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24930243 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0454;AVGPOST=0.9997;RSQ=0.9969;ERATE=0.0003;THETA=0.0005;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 24930293 rs113086859 A AG 9160 PASS INDEL;BAVGPOST=0.996;BRSQ=0.958;LDAF=0.0442;AVGPOST=0.9985;RSQ=0.9866;ERATE=0.0004;THETA=0.0006;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 24930294 . G GA 1798 PASS INDEL;BAVGPOST=0.996;BRSQ=0.955;LDAF=0.0434;AVGPOST=0.9974;RSQ=0.9762;ERATE=0.0006;THETA=0.0006;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 24930308 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24930322 . GTAAT G 204 PASS INDEL;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5845;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24930360 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0451;AVGPOST=0.9996;RSQ=0.9962;ERATE=0.0003;THETA=0.0003;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 24930504 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24930535 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0070;AVGPOST=0.9998;RSQ=0.9842;ERATE=0.0003;THETA=0.0009;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 24930636 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0454;AVGPOST=0.9991;RSQ=0.9923;ERATE=0.0003;THETA=0.0007;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 24930679 rs11293231 CT C 5324 PASS INDEL;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0458;AVGPOST=0.9971;RSQ=0.9759;ERATE=0.0005;THETA=0.0019;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 24930685 . TG T 31 PASS INDEL;BAVGPOST=0.989;BRSQ=0.359;LDAF=0.0089;AVGPOST=0.9935;RSQ=0.7227;ERATE=0.0006;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 24930758 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0364;AVGPOST=0.9991;RSQ=0.9894;ERATE=0.0003;THETA=0.0008;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 24930763 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.969;LDAF=0.0445;AVGPOST=0.9987;RSQ=0.9895;ERATE=0.0003;THETA=0.0004;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 24930773 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.969;LDAF=0.0446;AVGPOST=0.9984;RSQ=0.9867;ERATE=0.0005;THETA=0.0006;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 24930816 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.897;LDAF=0.0548;AVGPOST=0.9855;RSQ=0.8980;ERATE=0.0028;THETA=0.0008;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 24930844 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.965;LDAF=0.0448;AVGPOST=0.9985;RSQ=0.9874;ERATE=0.0004;THETA=0.0004;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 24930908 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.919;LDAF=0.0438;AVGPOST=0.9982;RSQ=0.9846;ERATE=0.0004;THETA=0.0008;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 24930953 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.833;LDAF=0.0348;AVGPOST=0.9924;RSQ=0.9207;ERATE=0.0006;THETA=0.0004;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 24930954 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.830;LDAF=0.0376;AVGPOST=0.9881;RSQ=0.8860;ERATE=0.0007;THETA=0.0004;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 24931050 rs112158378 AG A 1167 PASS INDEL;BAVGPOST=0.985;BRSQ=0.760;LDAF=0.0370;AVGPOST=0.9900;RSQ=0.8996;ERATE=0.0006;THETA=0.0007;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 24931058 . A ACT 1830 PASS INDEL;BAVGPOST=0.985;BRSQ=0.757;LDAF=0.0364;AVGPOST=0.9897;RSQ=0.9003;ERATE=0.0007;THETA=0.0004;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 24931097 rs71032835 ATAT A 647 PASS INDEL;BAVGPOST=0.516;BRSQ=0.033;LDAF=0.7570;AVGPOST=0.6882;RSQ=0.2715;ERATE=0.0202;THETA=0.0029;AC=1870;AN=2184 GT:DS:GL:BD 0.85622710 1
1 24931162 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.978;LDAF=0.5475;AVGPOST=0.9782;RSQ=0.9641;ERATE=0.0010;THETA=0.0016;AC=1194;AN=2184 GT:DS:GL:BD 0.54670328 1
1 24931163 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.951;LDAF=0.0411;AVGPOST=0.9913;RSQ=0.9121;ERATE=0.0010;THETA=0.0009;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 24931200 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0445;AVGPOST=0.9990;RSQ=0.9932;ERATE=0.0003;THETA=0.0005;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 24931332 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.969;LDAF=0.0449;AVGPOST=0.9979;RSQ=0.9835;ERATE=0.0005;THETA=0.0006;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 24931363 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.877;LDAF=0.0256;AVGPOST=0.9923;RSQ=0.8740;ERATE=0.0008;THETA=0.0009;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 24931364 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0119;AVGPOST=0.9955;RSQ=0.8504;ERATE=0.0006;THETA=0.0013;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 24931404 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.925;LDAF=0.0457;AVGPOST=0.9963;RSQ=0.9669;ERATE=0.0006;THETA=0.0009;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 24931444 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.941;LDAF=0.0438;AVGPOST=0.9977;RSQ=0.9810;ERATE=0.0004;THETA=0.0004;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 24931479 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.935;LDAF=0.0421;AVGPOST=0.9957;RSQ=0.9643;ERATE=0.0005;THETA=0.0005;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 24931480 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.934;LDAF=0.0420;AVGPOST=0.9951;RSQ=0.9559;ERATE=0.0005;THETA=0.0008;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 24931521 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0071;AVGPOST=0.9944;RSQ=0.6846;ERATE=0.0005;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 24931567 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.816;LDAF=0.0287;AVGPOST=0.9932;RSQ=0.9193;ERATE=0.0004;THETA=0.0003;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 24931585 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.961;LDAF=0.0416;AVGPOST=0.9953;RSQ=0.9610;ERATE=0.0003;THETA=0.0004;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 24931597 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.916;LDAF=0.0409;AVGPOST=0.9942;RSQ=0.9513;ERATE=0.0006;THETA=0.0006;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 24931711 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9306;ERATE=0.0006;THETA=0.0040;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24931775 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6633;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24931776 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5650;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24931794 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24931795 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24931851 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0452;AVGPOST=0.9999;RSQ=0.9987;ERATE=0.0003;THETA=0.0005;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 24931867 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0452;AVGPOST=0.9998;RSQ=0.9978;ERATE=0.0003;THETA=0.0007;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 24931925 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7227;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24931926 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0444;AVGPOST=0.9994;RSQ=0.9945;ERATE=0.0003;THETA=0.0004;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 24931939 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0452;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 24931994 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0452;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0012;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 24932002 . A AG 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.731;LDAF=0.0020;AVGPOST=0.9980;RSQ=0.5574;ERATE=0.0005;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24932030 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8665;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24932046 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24932047 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0050;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 24932048 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0452;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0008;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 24932061 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0452;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0008;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 24932109 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24932175 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24932217 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24932223 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0457;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 24932231 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24932232 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0463;AVGPOST=0.9997;RSQ=0.9969;ERATE=0.0003;THETA=0.0007;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 24932234 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24932247 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24932251 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0457;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 24932325 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0457;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 24932437 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0458;AVGPOST=0.9998;RSQ=0.9979;ERATE=0.0003;THETA=0.0006;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 24932444 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0439;AVGPOST=0.9995;RSQ=0.9951;ERATE=0.0006;THETA=0.0005;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 24932510 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.981;LDAF=0.0448;AVGPOST=0.9997;RSQ=0.9969;ERATE=0.0003;THETA=0.0004;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 24932531 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7986;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24932545 rs68008175 CAGAT C 10989 PASS INDEL;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0454;AVGPOST=0.9988;RSQ=0.9896;ERATE=0.0003;THETA=0.0009;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 24932648 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0457;AVGPOST=0.9998;RSQ=0.9982;ERATE=0.0003;THETA=0.0007;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 24932710 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0457;AVGPOST=1.0000;RSQ=0.9996;ERATE=0.0003;THETA=0.0009;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 24932721 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0458;AVGPOST=0.9998;RSQ=0.9979;ERATE=0.0003;THETA=0.0027;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 24932733 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3379;AVGPOST=0.9979;RSQ=0.9961;ERATE=0.0005;THETA=0.0006;AC=738;AN=2184 GT:DS:GL:BD 0.33791208 0
1 24932834 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0457;AVGPOST=0.9999;RSQ=0.9991;ERATE=0.0003;THETA=0.0005;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 24932942 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5533;AVGPOST=0.9981;RSQ=0.9964;ERATE=0.0005;THETA=0.0004;AC=1207;AN=2184 GT:DS:GL:BD 0.55265570 1
1 24932982 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0359;AVGPOST=0.9996;RSQ=0.9947;ERATE=0.0003;THETA=0.0003;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 24932998 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0458;AVGPOST=0.9998;RSQ=0.9983;ERATE=0.0003;THETA=0.0009;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 24933008 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0457;AVGPOST=0.9999;RSQ=0.9987;ERATE=0.0003;THETA=0.0004;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 24933037 rs113015031 A AC 7796 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0457;AVGPOST=0.9996;RSQ=0.9964;ERATE=0.0003;THETA=0.0006;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 24933039 . G GC 7761 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0457;AVGPOST=0.9999;RSQ=0.9991;ERATE=0.0003;THETA=0.0012;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 24933049 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9181;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24933056 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.987;LDAF=0.0456;AVGPOST=0.9997;RSQ=0.9974;ERATE=0.0003;THETA=0.0005;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 24933076 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0457;AVGPOST=1.0000;RSQ=0.9996;ERATE=0.0003;THETA=0.0006;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 24933102 . CTCTA C 89 PASS INDEL;BAVGPOST=0.999;BRSQ=0.800;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6806;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24933108 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0013;AVGPOST=0.9996;RSQ=0.8778;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24933110 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9756;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24933194 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2651;AVGPOST=0.9989;RSQ=0.9977;ERATE=0.0004;THETA=0.0007;AC=579;AN=2184 GT:DS:GL:BD 0.26510990 0
1 24933350 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6620;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24933372 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0464;AVGPOST=0.9988;RSQ=0.9914;ERATE=0.0003;THETA=0.0003;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 24933423 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24933439 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0359;AVGPOST=0.9995;RSQ=0.9928;ERATE=0.0004;THETA=0.0005;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 24933482 . C CT 42 PASS INDEL;BAVGPOST=0.993;BRSQ=0.439;LDAF=0.0059;AVGPOST=0.9949;RSQ=0.6569;ERATE=0.0008;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 24933549 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0046;AVGPOST=0.9979;RSQ=0.8135;ERATE=0.0005;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 24933560 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.973;LDAF=0.0510;AVGPOST=0.9992;RSQ=0.9929;ERATE=0.0004;THETA=0.0005;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 24933653 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8229;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24933684 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.764;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7531;ERATE=0.0007;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24933688 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.747;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4128;ERATE=0.0005;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24933689 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.633;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5938;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24933757 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.979;LDAF=0.3064;AVGPOST=0.9909;RSQ=0.9828;ERATE=0.0008;THETA=0.0006;AC=671;AN=2184 GT:DS:GL:BD 0.30723444 0
1 24933758 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.739;LDAF=0.0332;AVGPOST=0.9832;RSQ=0.8192;ERATE=0.0009;THETA=0.0004;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 24933795 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8681;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24933801 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.3809;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24933879 . CAT C 6997 PASS INDEL;BAVGPOST=0.995;BRSQ=0.952;LDAF=0.0460;AVGPOST=0.9991;RSQ=0.9917;ERATE=0.0005;THETA=0.0007;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 24933950 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7644;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24933977 rs34150986 T TA 30433 PASS INDEL;BAVGPOST=0.987;BRSQ=0.970;LDAF=0.2695;AVGPOST=0.9908;RSQ=0.9811;ERATE=0.0019;THETA=0.0012;AC=590;AN=2184 GT:DS:GL:BD 0.27014652 0
1 24934069 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8990;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24934075 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0459;AVGPOST=0.9994;RSQ=0.9943;ERATE=0.0004;THETA=0.0004;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 24934085 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.960;LDAF=0.0358;AVGPOST=0.9993;RSQ=0.9906;ERATE=0.0004;THETA=0.0007;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 24934127 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.939;LDAF=0.0453;AVGPOST=0.9985;RSQ=0.9859;ERATE=0.0005;THETA=0.0005;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 24934213 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0460;AVGPOST=0.9993;RSQ=0.9938;ERATE=0.0003;THETA=0.0005;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 24934223 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0459;AVGPOST=0.9984;RSQ=0.9851;ERATE=0.0005;THETA=0.0010;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 24934244 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0460;AVGPOST=0.9991;RSQ=0.9920;ERATE=0.0003;THETA=0.0009;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 24934266 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0459;AVGPOST=0.9994;RSQ=0.9944;ERATE=0.0003;THETA=0.0037;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 24934391 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0457;AVGPOST=0.9999;RSQ=0.9987;ERATE=0.0003;THETA=0.0005;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 24934411 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0458;AVGPOST=0.9997;RSQ=0.9969;ERATE=0.0003;THETA=0.0005;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 24934435 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0458;AVGPOST=0.9997;RSQ=0.9970;ERATE=0.0003;THETA=0.0006;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 24934463 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0457;AVGPOST=0.9998;RSQ=0.9982;ERATE=0.0003;THETA=0.0026;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 24934465 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.899;LDAF=0.0052;AVGPOST=0.9991;RSQ=0.9224;ERATE=0.0004;THETA=0.0100;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 24934618 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.976;LDAF=0.0441;AVGPOST=0.9979;RSQ=0.9843;ERATE=0.0004;THETA=0.0029;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 24934636 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0452;AVGPOST=0.9987;RSQ=0.9896;ERATE=0.0003;THETA=0.0006;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 24934652 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0452;AVGPOST=0.9987;RSQ=0.9896;ERATE=0.0003;THETA=0.0006;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 24934674 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0453;AVGPOST=0.9983;RSQ=0.9867;ERATE=0.0003;THETA=0.0101;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 24934762 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0459;AVGPOST=0.9984;RSQ=0.9883;ERATE=0.0003;THETA=0.0009;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 24934771 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.971;LDAF=0.0404;AVGPOST=0.9969;RSQ=0.9761;ERATE=0.0004;THETA=0.0008;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 24934772 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.970;LDAF=0.0404;AVGPOST=0.9969;RSQ=0.9761;ERATE=0.0003;THETA=0.0009;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 24934777 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.977;LDAF=0.0451;AVGPOST=0.9984;RSQ=0.9871;ERATE=0.0004;THETA=0.0018;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 24934844 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0459;AVGPOST=0.9993;RSQ=0.9944;ERATE=0.0003;THETA=0.0007;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 24934871 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.975;LDAF=0.0402;AVGPOST=0.9973;RSQ=0.9771;ERATE=0.0004;THETA=0.0004;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 24934872 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.975;LDAF=0.0399;AVGPOST=0.9971;RSQ=0.9770;ERATE=0.0003;THETA=0.0010;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 24935022 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0464;AVGPOST=0.9987;RSQ=0.9902;ERATE=0.0004;THETA=0.0007;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 24935081 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0466;AVGPOST=0.9988;RSQ=0.9901;ERATE=0.0004;THETA=0.0007;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 24935086 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24935097 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0462;AVGPOST=0.9987;RSQ=0.9897;ERATE=0.0004;THETA=0.0008;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 24935117 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.708;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7454;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24935126 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.982;LDAF=0.0465;AVGPOST=0.9980;RSQ=0.9821;ERATE=0.0009;THETA=0.0013;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 24935204 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.971;LDAF=0.0461;AVGPOST=0.9989;RSQ=0.9915;ERATE=0.0005;THETA=0.0006;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 24935253 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0463;AVGPOST=0.9984;RSQ=0.9880;ERATE=0.0005;THETA=0.0027;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 24935325 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.709;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6172;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24935341 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0024;AVGPOST=0.9980;RSQ=0.6720;ERATE=0.0006;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24935430 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0447;AVGPOST=0.9996;RSQ=0.9965;ERATE=0.0003;THETA=0.0012;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 24935441 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0448;AVGPOST=0.9998;RSQ=0.9982;ERATE=0.0003;THETA=0.0006;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 24935444 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2006;AVGPOST=0.9961;RSQ=0.9891;ERATE=0.0004;THETA=0.0010;AC=438;AN=2184 GT:DS:GL:BD 0.20054945 0
1 24935526 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0449;AVGPOST=0.9991;RSQ=0.9926;ERATE=0.0004;THETA=0.0009;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 24935570 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0448;AVGPOST=0.9999;RSQ=0.9991;ERATE=0.0003;THETA=0.0010;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 24935648 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0449;AVGPOST=0.9998;RSQ=0.9982;ERATE=0.0003;THETA=0.0004;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 24935678 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0449;AVGPOST=0.9999;RSQ=0.9986;ERATE=0.0003;THETA=0.0003;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 24935692 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0022;AVGPOST=0.9997;RSQ=0.9445;ERATE=0.0004;THETA=0.0017;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24935750 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9662;ERATE=0.0003;THETA=0.0016;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24935819 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24935820 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0448;AVGPOST=0.9999;RSQ=0.9991;ERATE=0.0003;THETA=0.0004;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 24935914 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0453;AVGPOST=0.9989;RSQ=0.9900;ERATE=0.0003;THETA=0.0008;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 24935918 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0349;AVGPOST=0.9990;RSQ=0.9869;ERATE=0.0004;THETA=0.0007;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 24935957 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.870;LDAF=0.0184;AVGPOST=0.9924;RSQ=0.8651;ERATE=0.0003;THETA=0.0013;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 24935958 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.872;LDAF=0.0178;AVGPOST=0.9924;RSQ=0.8636;ERATE=0.0004;THETA=0.0005;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 24935966 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.839;LDAF=0.0162;AVGPOST=0.9944;RSQ=0.8878;ERATE=0.0003;THETA=0.0005;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 24935967 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.837;LDAF=0.0183;AVGPOST=0.9927;RSQ=0.8665;ERATE=0.0003;THETA=0.0011;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 24935969 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.836;LDAF=0.0171;AVGPOST=0.9936;RSQ=0.8766;ERATE=0.0004;THETA=0.0008;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 24935992 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.766;LDAF=0.0212;AVGPOST=0.9906;RSQ=0.8524;ERATE=0.0003;THETA=0.0008;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 24936050 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0454;AVGPOST=0.9985;RSQ=0.9866;ERATE=0.0003;THETA=0.0009;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 24936119 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.734;LDAF=0.0058;AVGPOST=0.9980;RSQ=0.8583;ERATE=0.0004;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 24936123 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4644;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24936128 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.934;LDAF=0.0407;AVGPOST=0.9980;RSQ=0.9835;ERATE=0.0003;THETA=0.0021;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 24936131 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.934;LDAF=0.0414;AVGPOST=0.9968;RSQ=0.9711;ERATE=0.0005;THETA=0.0004;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 24936208 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.934;LDAF=0.0420;AVGPOST=0.9977;RSQ=0.9794;ERATE=0.0004;THETA=0.0005;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 24936224 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0449;AVGPOST=0.9993;RSQ=0.9937;ERATE=0.0003;THETA=0.0012;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 24936250 . TC T 53 PASS INDEL;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6043;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24936280 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8824;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24936293 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0447;AVGPOST=0.9995;RSQ=0.9947;ERATE=0.0003;THETA=0.0008;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 24936297 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0446;AVGPOST=0.9995;RSQ=0.9956;ERATE=0.0003;THETA=0.0008;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 24936349 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0448;AVGPOST=0.9998;RSQ=0.9982;ERATE=0.0003;THETA=0.0031;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 24936412 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0448;AVGPOST=0.9999;RSQ=0.9986;ERATE=0.0003;THETA=0.0029;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 24936486 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24936489 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0449;AVGPOST=0.9997;RSQ=0.9973;ERATE=0.0003;THETA=0.0012;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 24936513 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0449;AVGPOST=0.9997;RSQ=0.9969;ERATE=0.0003;THETA=0.0005;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 24936544 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0454;AVGPOST=0.9995;RSQ=0.9952;ERATE=0.0003;THETA=0.0032;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 24936570 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.878;LDAF=0.0092;AVGPOST=0.9976;RSQ=0.8900;ERATE=0.0008;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 24936573 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6952;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24936591 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0446;AVGPOST=0.9995;RSQ=0.9951;ERATE=0.0003;THETA=0.0004;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 24936629 rs72513752 TCATTCTTTTG T 16399 PASS INDEL;BAVGPOST=0.997;BRSQ=0.969;LDAF=0.0417;AVGPOST=0.9984;RSQ=0.9887;ERATE=0.0003;THETA=0.0004;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 24936679 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.6973;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24936713 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6583;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24936729 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0448;AVGPOST=0.9998;RSQ=0.9982;ERATE=0.0003;THETA=0.0012;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 24936750 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8178;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24936792 . GAC G 2724 PASS INDEL;BAVGPOST=0.996;BRSQ=0.940;LDAF=0.0380;AVGPOST=0.9965;RSQ=0.9669;ERATE=0.0004;THETA=0.0021;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 24936800 . TG T 2291 PASS INDEL;BAVGPOST=0.996;BRSQ=0.941;LDAF=0.0357;AVGPOST=0.9952;RSQ=0.9536;ERATE=0.0004;THETA=0.0006;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 24936801 . G GAT 8582 PASS INDEL;BAVGPOST=0.996;BRSQ=0.938;LDAF=0.0356;AVGPOST=0.9957;RSQ=0.9593;ERATE=0.0003;THETA=0.0005;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 24936884 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0448;AVGPOST=0.9999;RSQ=0.9991;ERATE=0.0003;THETA=0.0015;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 24936930 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0448;AVGPOST=0.9998;RSQ=0.9977;ERATE=0.0003;THETA=0.0011;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 24936996 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0026;AVGPOST=0.9984;RSQ=0.7209;ERATE=0.0013;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24937000 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6964;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24937036 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24937152 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24937184 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.851;LDAF=0.0065;AVGPOST=0.9975;RSQ=0.8455;ERATE=0.0003;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 24937258 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0452;AVGPOST=0.9991;RSQ=0.9928;ERATE=0.0003;THETA=0.0003;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 24937343 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5518;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24937375 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9503;ERATE=0.0004;THETA=0.0015;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 24937446 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2892;AVGPOST=0.9967;RSQ=0.9932;ERATE=0.0005;THETA=0.0005;AC=631;AN=2184 GT:DS:GL:BD 0.28891942 0
1 24937483 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0448;AVGPOST=0.9987;RSQ=0.9884;ERATE=0.0003;THETA=0.0012;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 24937515 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0056;AVGPOST=0.9989;RSQ=0.9099;ERATE=0.0005;THETA=0.0012;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 24937628 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0450;AVGPOST=0.9991;RSQ=0.9919;ERATE=0.0004;THETA=0.0006;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 24937634 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24937679 . TAC T 287 PASS INDEL;BAVGPOST=0.975;BRSQ=0.630;LDAF=0.0570;AVGPOST=0.9394;RSQ=0.5420;ERATE=0.0253;THETA=0.0007;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 24937800 rs111504029 C CA 10628 PASS INDEL;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0471;AVGPOST=0.9977;RSQ=0.9816;ERATE=0.0004;THETA=0.0009;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 24937857 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24937904 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24937940 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0345;AVGPOST=0.9992;RSQ=0.9902;ERATE=0.0003;THETA=0.0007;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 24937952 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0439;AVGPOST=0.9999;RSQ=0.9986;ERATE=0.0003;THETA=0.0013;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 24938018 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0449;AVGPOST=0.9998;RSQ=0.9977;ERATE=0.0003;THETA=0.0007;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 24938050 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8891;ERATE=0.0003;THETA=0.0051;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24938100 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0448;AVGPOST=1.0000;RSQ=0.9995;ERATE=0.0003;THETA=0.0005;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 24938156 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5922;AVGPOST=0.9964;RSQ=0.9935;ERATE=0.0006;THETA=0.0004;AC=1293;AN=2184 GT:DS:GL:BD 0.59203297 1
1 24938280 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0448;AVGPOST=0.9999;RSQ=0.9986;ERATE=0.0003;THETA=0.0014;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 24938291 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0445;AVGPOST=0.9985;RSQ=0.9873;ERATE=0.0004;THETA=0.0006;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 24938298 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24938455 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0448;AVGPOST=0.9998;RSQ=0.9977;ERATE=0.0003;THETA=0.0003;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 24938509 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.961;LDAF=0.0325;AVGPOST=0.9970;RSQ=0.9639;ERATE=0.0004;THETA=0.0005;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 24938540 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0072;AVGPOST=0.9968;RSQ=0.8577;ERATE=0.0004;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 24938659 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5286;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24938702 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0020;AVGPOST=0.9985;RSQ=0.6657;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24938713 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0345;AVGPOST=0.9991;RSQ=0.9878;ERATE=0.0005;THETA=0.0005;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 24938805 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7986;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24938890 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5384;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24938999 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4957;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24939009 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0446;AVGPOST=0.9984;RSQ=0.9875;ERATE=0.0004;THETA=0.0002;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 24939070 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0063;AVGPOST=0.9991;RSQ=0.9424;ERATE=0.0004;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 24939079 . ATTTTTT A 170 PASS INDEL;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0021;AVGPOST=0.9975;RSQ=0.4819;ERATE=0.0008;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24939100 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.837;LDAF=0.0054;AVGPOST=0.9959;RSQ=0.6798;ERATE=0.0018;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 24939125 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0451;AVGPOST=0.9991;RSQ=0.9916;ERATE=0.0004;THETA=0.0003;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 24939267 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.5883;AVGPOST=0.9843;RSQ=0.9732;ERATE=0.0032;THETA=0.0009;AC=1288;AN=2184 GT:DS:GL:BD 0.58974361 1
1 24939281 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0029;AVGPOST=0.9970;RSQ=0.6678;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 24939289 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0023;AVGPOST=0.9979;RSQ=0.6583;ERATE=0.0007;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24939423 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.706;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6404;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24939442 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7916;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24939643 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6915;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24939728 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.5995;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24939809 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2745;AVGPOST=0.9981;RSQ=0.9960;ERATE=0.0005;THETA=0.0004;AC=598;AN=2184 GT:DS:GL:BD 0.27380952 0
1 24939842 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0449;AVGPOST=0.9984;RSQ=0.9850;ERATE=0.0005;THETA=0.0003;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 24939843 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0017;AVGPOST=0.9987;RSQ=0.6708;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24939892 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0025;AVGPOST=0.9985;RSQ=0.7841;ERATE=0.0006;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24939960 rs57159820 A AAC 1074 PASS INDEL;BAVGPOST=0.893;BRSQ=0.314;LDAF=0.0995;AVGPOST=0.8860;RSQ=0.5034;ERATE=0.0034;THETA=0.0007;AC=136;AN=2184 GT:DS:GL:BD 0.06227106 0
1 24939965 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.950;LDAF=0.0299;AVGPOST=0.9961;RSQ=0.9503;ERATE=0.0005;THETA=0.0008;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 24940056 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.909;LDAF=0.0071;AVGPOST=0.9976;RSQ=0.8524;ERATE=0.0005;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 24940081 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0346;AVGPOST=0.9989;RSQ=0.9845;ERATE=0.0004;THETA=0.0006;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 24940141 . AAAT A 79 PASS INDEL;BAVGPOST=0.997;BRSQ=0.731;LDAF=0.0119;AVGPOST=0.9857;RSQ=0.4933;ERATE=0.0045;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 24940165 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24940171 rs34375588 CA C 32631 PASS INDEL;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.3173;AVGPOST=0.9965;RSQ=0.9937;ERATE=0.0011;THETA=0.0005;AC=693;AN=2184 GT:DS:GL:BD 0.31730768 0
1 24940188 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.871;LDAF=0.0028;AVGPOST=0.9991;RSQ=0.8787;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24940192 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6258;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24940250 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.7208;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24940282 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0065;AVGPOST=0.9998;RSQ=0.9865;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 24940569 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2726;AVGPOST=0.9955;RSQ=0.9912;ERATE=0.0006;THETA=0.0006;AC=594;AN=2184 GT:DS:GL:BD 0.27197802 0
1 24940570 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0331;AVGPOST=0.9984;RSQ=0.9796;ERATE=0.0005;THETA=0.0006;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 24940713 . AATT A 5572 PASS INDEL;BAVGPOST=0.857;BRSQ=0.677;LDAF=0.3168;AVGPOST=0.7866;RSQ=0.6132;ERATE=0.0177;THETA=0.0005;AC=590;AN=2184 GT:DS:GL:BD 0.27014652 0
1 24940716 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.786;LDAF=0.0294;AVGPOST=0.9933;RSQ=0.9164;ERATE=0.0005;THETA=0.0003;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 24940740 . T TA 8963 PASS INDEL;BAVGPOST=0.778;BRSQ=0.624;LDAF=0.4769;AVGPOST=0.7476;RSQ=0.6230;ERATE=0.0311;THETA=0.0004;AC=1013;AN=2184 GT:DS:GL:BD 0.46382785 0
1 24940742 . T TA 158 PASS INDEL;BAVGPOST=0.833;BRSQ=0.548;LDAF=0.1868;AVGPOST=0.8889;RSQ=0.7503;ERATE=0.0012;THETA=0.0003;AC=395;AN=2184 GT:DS:GL:BD 0.18086080 0
1 24940745 rs58912676 T TA 712 PASS INDEL;BAVGPOST=0.874;BRSQ=0.712;LDAF=0.2422;AVGPOST=0.8962;RSQ=0.8095;ERATE=0.0023;THETA=0.0005;AC=534;AN=2184 GT:DS:GL:BD 0.24450549 0
1 24940749 rs58938406 T TA 942 PASS INDEL;BAVGPOST=0.871;BRSQ=0.705;LDAF=0.2277;AVGPOST=0.8697;RSQ=0.7505;ERATE=0.0036;THETA=0.0004;AC=491;AN=2184 GT:DS:GL:BD 0.22481684 0
1 24940751 rs56910767 T TA 3039 PASS INDEL;BAVGPOST=0.929;BRSQ=0.849;LDAF=0.2844;AVGPOST=0.9402;RSQ=0.9014;ERATE=0.0013;THETA=0.0006;AC=638;AN=2184 GT:DS:GL:BD 0.29212454 0
1 24940803 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.692;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4088;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24940893 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.498;LDAF=0.0016;AVGPOST=0.9980;RSQ=0.5344;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24940894 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.661;LDAF=0.0021;AVGPOST=0.9973;RSQ=0.4857;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24941102 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0088;AVGPOST=0.9984;RSQ=0.9272;ERATE=0.0004;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 24941140 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5908;AVGPOST=0.9963;RSQ=0.9930;ERATE=0.0005;THETA=0.0005;AC=1291;AN=2184 GT:DS:GL:BD 0.59111720 1
1 24941166 . TGTAA T 91 PASS INDEL;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5400;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24941172 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3179;AVGPOST=0.9980;RSQ=0.9961;ERATE=0.0006;THETA=0.0010;AC=694;AN=2184 GT:DS:GL:BD 0.31776556 0
1 24941205 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0059;AVGPOST=0.9995;RSQ=0.9572;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 24941395 . C CA 7720 PASS INDEL;BAVGPOST=0.990;BRSQ=0.900;LDAF=0.0428;AVGPOST=0.9939;RSQ=0.9446;ERATE=0.0004;THETA=0.0005;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 24941418 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24941423 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0278;AVGPOST=0.9987;RSQ=0.9824;ERATE=0.0003;THETA=0.0005;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 24941474 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6782;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24941514 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.935;LDAF=0.0230;AVGPOST=0.9956;RSQ=0.9333;ERATE=0.0004;THETA=0.0006;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 24941640 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5932;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24941671 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5736;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24941790 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.971;LDAF=0.3119;AVGPOST=0.9846;RSQ=0.9728;ERATE=0.0018;THETA=0.0005;AC=684;AN=2184 GT:DS:GL:BD 0.31318682 0
1 24941854 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.2752;AVGPOST=0.9981;RSQ=0.9957;ERATE=0.0007;THETA=0.0014;AC=600;AN=2184 GT:DS:GL:BD 0.27472529 0
1 24942232 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3177;AVGPOST=0.9980;RSQ=0.9965;ERATE=0.0005;THETA=0.0024;AC=693;AN=2184 GT:DS:GL:BD 0.31730768 0
1 24942470 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.3163;AVGPOST=0.9962;RSQ=0.9934;ERATE=0.0005;THETA=0.0005;AC=692;AN=2184 GT:DS:GL:BD 0.31684983 0
1 24942579 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.784;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8739;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24942597 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0048;AVGPOST=0.9988;RSQ=0.9060;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 24942622 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0439;AVGPOST=0.9988;RSQ=0.9900;ERATE=0.0003;THETA=0.0004;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 24942672 . ATT A 495 PASS INDEL;BAVGPOST=0.998;BRSQ=0.872;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8643;ERATE=0.0006;THETA=0.0001;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24942753 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7149;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24942858 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24942878 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.3177;AVGPOST=0.9968;RSQ=0.9946;ERATE=0.0005;THETA=0.0007;AC=691;AN=2184 GT:DS:GL:BD 0.31639194 0
1 24942922 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9801;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24942924 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9107;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24943149 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.858;LDAF=0.0849;AVGPOST=0.9899;RSQ=0.9536;ERATE=0.0004;THETA=0.0034;AC=184;AN=2184 GT:DS:GL:BD 0.08424909 0
1 24943159 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.869;LDAF=0.0207;AVGPOST=0.9985;RSQ=0.9704;ERATE=0.0003;THETA=0.0007;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 24943165 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.972;LDAF=0.0439;AVGPOST=0.9983;RSQ=0.9864;ERATE=0.0003;THETA=0.0004;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 24943317 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.4715;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24943387 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6398;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24943488 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24943673 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0044;AVGPOST=0.9978;RSQ=0.8288;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 24943683 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.7099;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24943714 . AG A 641 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0076;AVGPOST=0.9977;RSQ=0.8837;ERATE=0.0006;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 24943795 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.805;LDAF=0.0083;AVGPOST=0.9942;RSQ=0.6969;ERATE=0.0030;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 24943799 . TTA T 10083 PASS INDEL;BAVGPOST=0.961;BRSQ=0.917;LDAF=0.2991;AVGPOST=0.9647;RSQ=0.9379;ERATE=0.0036;THETA=0.0005;AC=666;AN=2184 GT:DS:GL:BD 0.30494505 0
1 24943800 rs113686417 TA T 18077 PASS INDEL;BAVGPOST=0.977;BRSQ=0.954;LDAF=0.3140;AVGPOST=0.9823;RSQ=0.9705;ERATE=0.0019;THETA=0.0004;AC=689;AN=2184 GT:DS:GL:BD 0.31547618 0
1 24943804 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.659;LDAF=0.0021;AVGPOST=0.9977;RSQ=0.5348;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24943864 . T TC 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7863;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24943901 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0013;AVGPOST=0.9996;RSQ=0.8755;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24943936 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0066;AVGPOST=0.9996;RSQ=0.9733;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 24944004 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24944037 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7209;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24944057 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24944078 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.899;LDAF=0.0043;AVGPOST=0.9976;RSQ=0.7543;ERATE=0.0007;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24944133 . CT C 254 PASS INDEL;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8774;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24944158 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9682;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24944215 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24944222 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.961;LDAF=0.0284;AVGPOST=0.9984;RSQ=0.9786;ERATE=0.0003;THETA=0.0004;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 24944403 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0434;AVGPOST=0.9997;RSQ=0.9973;ERATE=0.0003;THETA=0.0006;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 24944664 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5134;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24944678 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0277;AVGPOST=0.9994;RSQ=0.9900;ERATE=0.0003;THETA=0.0005;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 24944755 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.740;LDAF=0.0068;AVGPOST=0.9973;RSQ=0.8260;ERATE=0.0011;THETA=0.0009;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 24944912 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2732;AVGPOST=0.9959;RSQ=0.9928;ERATE=0.0006;THETA=0.0003;AC=597;AN=2184 GT:DS:GL:BD 0.27335164 0
1 24944922 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6526;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24945040 rs59460185 TA T 17391 PASS INDEL;BAVGPOST=0.982;BRSQ=0.963;LDAF=0.3152;AVGPOST=0.9918;RSQ=0.9857;ERATE=0.0009;THETA=0.0004;AC=691;AN=2184 GT:DS:GL:BD 0.31639194 0
1 24945042 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6872;ERATE=0.0004;THETA=0.0069;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24945046 . AT A 608 PASS INDEL;BAVGPOST=0.913;BRSQ=0.543;LDAF=0.0801;AVGPOST=0.9288;RSQ=0.6601;ERATE=0.0013;THETA=0.0008;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 24945107 . CAGG C 224 PASS INDEL;BAVGPOST=0.999;BRSQ=0.735;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.7076;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24945144 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0022;AVGPOST=0.9974;RSQ=0.5072;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24945158 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0234;AVGPOST=0.9976;RSQ=0.9576;ERATE=0.0005;THETA=0.0012;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 24945246 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7023;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24945291 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.764;LDAF=0.0048;AVGPOST=0.9963;RSQ=0.6777;ERATE=0.0015;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24945312 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.2735;AVGPOST=0.9969;RSQ=0.9934;ERATE=0.0005;THETA=0.0010;AC=597;AN=2184 GT:DS:GL:BD 0.27335164 0
1 24945574 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.987;LDAF=0.2311;AVGPOST=0.9961;RSQ=0.9912;ERATE=0.0008;THETA=0.0004;AC=506;AN=2184 GT:DS:GL:BD 0.23168498 0
1 24945626 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0026;AVGPOST=0.9983;RSQ=0.7968;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24945655 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2738;AVGPOST=0.9975;RSQ=0.9952;ERATE=0.0007;THETA=0.0008;AC=599;AN=2184 GT:DS:GL:BD 0.27426741 0
1 24945656 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0228;AVGPOST=0.9989;RSQ=0.9805;ERATE=0.0003;THETA=0.0021;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 24945676 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.874;LDAF=0.0159;AVGPOST=0.9963;RSQ=0.8978;ERATE=0.0005;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 24945855 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0435;AVGPOST=0.9999;RSQ=0.9986;ERATE=0.0003;THETA=0.0008;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 24945863 rs112231691 GT G 7081 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0438;AVGPOST=0.9989;RSQ=0.9896;ERATE=0.0005;THETA=0.0011;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 24946004 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0345;AVGPOST=0.9995;RSQ=0.9921;ERATE=0.0004;THETA=0.0006;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 24946017 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24946118 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6392;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24946255 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.658;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24946262 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24946356 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0343;AVGPOST=0.9998;RSQ=0.9967;ERATE=0.0003;THETA=0.0006;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 24946530 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0020;AVGPOST=0.9970;RSQ=0.5256;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24946754 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.5824;AVGPOST=0.9843;RSQ=0.9735;ERATE=0.0027;THETA=0.0003;AC=1270;AN=2184 GT:DS:GL:BD 0.58150184 1
1 24946805 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0353;AVGPOST=0.9980;RSQ=0.9813;ERATE=0.0006;THETA=0.0005;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 24946810 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.923;LDAF=0.0344;AVGPOST=0.9995;RSQ=0.9921;ERATE=0.0004;THETA=0.0012;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 24946812 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.537;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7604;ERATE=0.0003;THETA=0.0039;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24946844 . T TG 1302 PASS INDEL;BAVGPOST=0.995;BRSQ=0.928;LDAF=0.0413;AVGPOST=0.9992;RSQ=0.9901;ERATE=0.0004;THETA=0.0003;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 24947175 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7868;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24947186 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2705;AVGPOST=0.9993;RSQ=0.9983;ERATE=0.0003;THETA=0.0004;AC=591;AN=2184 GT:DS:GL:BD 0.27060440 0
1 24947289 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2706;AVGPOST=0.9995;RSQ=0.9988;ERATE=0.0004;THETA=0.0007;AC=591;AN=2184 GT:DS:GL:BD 0.27060440 0
1 24947339 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7476;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24947453 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24947533 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9833;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 24947544 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0280;AVGPOST=0.9997;RSQ=0.9956;ERATE=0.0003;THETA=0.0006;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 24947556 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24947572 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24947610 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.475;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6279;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24947693 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.623;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4706;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24947806 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24947821 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0349;AVGPOST=0.9987;RSQ=0.9849;ERATE=0.0003;THETA=0.0005;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 24947836 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24947948 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2376;AVGPOST=0.9986;RSQ=0.9971;ERATE=0.0004;THETA=0.0004;AC=518;AN=2184 GT:DS:GL:BD 0.23717949 0
1 24948038 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.632;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24948082 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0004;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24948084 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5514;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24948109 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6166;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24948163 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0042;AVGPOST=0.9997;RSQ=0.9639;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 24948223 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.987;LDAF=0.3239;AVGPOST=0.9952;RSQ=0.9908;ERATE=0.0005;THETA=0.0012;AC=710;AN=2184 GT:DS:GL:BD 0.32509157 0
1 24948302 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.672;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6043;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24948365 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.851;LDAF=0.0040;AVGPOST=0.9977;RSQ=0.7514;ERATE=0.0007;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24948384 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.903;LDAF=0.0321;AVGPOST=0.9968;RSQ=0.9587;ERATE=0.0005;THETA=0.0008;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 24948483 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.882;LDAF=0.0119;AVGPOST=0.9918;RSQ=0.7189;ERATE=0.0015;THETA=0.0009;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 24948494 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.889;LDAF=0.0074;AVGPOST=0.9975;RSQ=0.8571;ERATE=0.0004;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 24948542 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0090;AVGPOST=0.9948;RSQ=0.7867;ERATE=0.0007;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 24948632 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7700;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24948797 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0373;AVGPOST=0.9979;RSQ=0.9784;ERATE=0.0003;THETA=0.0007;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 24948846 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.753;LDAF=0.0139;AVGPOST=0.9981;RSQ=0.9363;ERATE=0.0005;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 24948914 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.682;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5491;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24949008 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0449;AVGPOST=0.9989;RSQ=0.9914;ERATE=0.0003;THETA=0.0016;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 24949180 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.730;LDAF=0.0069;AVGPOST=0.9961;RSQ=0.7783;ERATE=0.0005;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 24949421 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0519;AVGPOST=0.9982;RSQ=0.9865;ERATE=0.0005;THETA=0.0035;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 24949448 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.5689;ERATE=0.0006;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24949542 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0043;AVGPOST=0.9947;RSQ=0.5289;ERATE=0.0013;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24949547 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.880;LDAF=0.0223;AVGPOST=0.9940;RSQ=0.8930;ERATE=0.0006;THETA=0.0005;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 24949648 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0027;AVGPOST=0.9981;RSQ=0.6873;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24949655 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.983;LDAF=0.5870;AVGPOST=0.9890;RSQ=0.9805;ERATE=0.0013;THETA=0.0002;AC=1284;AN=2184 GT:DS:GL:BD 0.58791208 1
1 24949703 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0054;AVGPOST=0.9963;RSQ=0.7388;ERATE=0.0004;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 24949741 rs72351413 AAAAG A 4451 PASS INDEL;BAVGPOST=0.997;BRSQ=0.976;LDAF=0.0501;AVGPOST=0.9936;RSQ=0.9502;ERATE=0.0014;THETA=0.0004;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 24949804 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4759;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24949829 . T TG 2401 PASS INDEL;BAVGPOST=0.996;BRSQ=0.949;LDAF=0.0349;AVGPOST=0.9989;RSQ=0.9854;ERATE=0.0005;THETA=0.0005;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 24949834 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6492;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24949868 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.608;LDAF=0.0189;AVGPOST=0.9812;RSQ=0.6019;ERATE=0.0083;THETA=0.0007;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 24949880 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2386;AVGPOST=0.9981;RSQ=0.9955;ERATE=0.0005;THETA=0.0007;AC=521;AN=2184 GT:DS:GL:BD 0.23855311 0
1 24949982 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5794;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24950250 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2735;AVGPOST=0.9975;RSQ=0.9948;ERATE=0.0004;THETA=0.0004;AC=597;AN=2184 GT:DS:GL:BD 0.27335164 0
1 24950268 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5469;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24950340 . TTA T 482 PASS INDEL;BAVGPOST=0.928;BRSQ=0.534;LDAF=0.1219;AVGPOST=0.8776;RSQ=0.5096;ERATE=0.0325;THETA=0.0004;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 24950347 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5399;ERATE=0.0004;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24950350 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.611;LDAF=0.0066;AVGPOST=0.9941;RSQ=0.6295;ERATE=0.0013;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 24950352 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.969;LDAF=0.4959;AVGPOST=0.9708;RSQ=0.9569;ERATE=0.0042;THETA=0.0004;AC=1086;AN=2184 GT:DS:GL:BD 0.49725273 0
1 24950480 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.862;LDAF=0.0140;AVGPOST=0.9967;RSQ=0.9183;ERATE=0.0003;THETA=0.0006;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 24950553 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0004;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24950566 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.880;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8575;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24950695 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.835;LDAF=0.0093;AVGPOST=0.9986;RSQ=0.9496;ERATE=0.0003;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 24950722 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8911;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24950723 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7735;ERATE=0.0005;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24950784 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5723;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24950807 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.979;LDAF=0.0436;AVGPOST=0.9988;RSQ=0.9891;ERATE=0.0004;THETA=0.0004;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 24950857 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0188;AVGPOST=0.9990;RSQ=0.9799;ERATE=0.0004;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 24950910 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9652;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 24950917 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0252;AVGPOST=0.9995;RSQ=0.9906;ERATE=0.0004;THETA=0.0006;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 24950937 . CTG C 54 PASS INDEL;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6453;ERATE=0.0004;THETA=0.0039;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24951034 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.785;LDAF=0.0035;AVGPOST=0.9974;RSQ=0.7661;ERATE=0.0006;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 24951119 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.991;LDAF=0.5666;AVGPOST=0.9834;RSQ=0.9733;ERATE=0.0032;THETA=0.0005;AC=1237;AN=2184 GT:DS:GL:BD 0.56639194 1
1 24951127 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.7161;ERATE=0.0004;THETA=0.0032;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24951170 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.703;LDAF=0.0023;AVGPOST=0.9964;RSQ=0.4027;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24951361 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.751;LDAF=0.0023;AVGPOST=0.9972;RSQ=0.5017;ERATE=0.0006;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24951398 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6001;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24951426 . G GA 21 PASS INDEL;BAVGPOST=0.996;BRSQ=0.463;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.3553;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24951437 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.662;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5464;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24951484 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.607;LDAF=0.0023;AVGPOST=0.9963;RSQ=0.3663;ERATE=0.0007;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24951534 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7631;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24951600 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.776;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6605;ERATE=0.0004;THETA=0.0029;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24951772 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6889;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24951792 . TAA T 117 PASS INDEL;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0024;AVGPOST=0.9995;RSQ=0.9194;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24951878 rs35197089 TTTTC T 27093 PASS INDEL;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2748;AVGPOST=0.9955;RSQ=0.9908;ERATE=0.0006;THETA=0.0004;AC=599;AN=2184 GT:DS:GL:BD 0.27426741 0
1 24951926 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9545;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24951939 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24952033 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.737;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8063;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24952117 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0054;AVGPOST=0.9992;RSQ=0.9314;ERATE=0.0004;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 24952233 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24952266 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5328;AVGPOST=0.9963;RSQ=0.9934;ERATE=0.0008;THETA=0.0004;AC=1163;AN=2184 GT:DS:GL:BD 0.53250915 1
1 24952371 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5336;AVGPOST=0.9970;RSQ=0.9946;ERATE=0.0006;THETA=0.0014;AC=1165;AN=2184 GT:DS:GL:BD 0.53342491 1
1 24952382 . A AC 4468 PASS INDEL;BAVGPOST=0.997;BRSQ=0.964;LDAF=0.0338;AVGPOST=0.9989;RSQ=0.9867;ERATE=0.0004;THETA=0.0005;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 24952469 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.734;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5673;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24952535 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8184;ERATE=0.0005;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24952562 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0335;AVGPOST=0.9991;RSQ=0.9900;ERATE=0.0003;THETA=0.0005;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 24952693 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.2564;AVGPOST=0.9979;RSQ=0.9951;ERATE=0.0005;THETA=0.0007;AC=559;AN=2184 GT:DS:GL:BD 0.25595239 0
1 24952724 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24952781 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.562;LDAF=0.0033;AVGPOST=0.9961;RSQ=0.5066;ERATE=0.0007;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24952805 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.898;LDAF=0.0279;AVGPOST=0.9968;RSQ=0.9574;ERATE=0.0006;THETA=0.0003;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 24952807 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.766;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4298;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24952873 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.644;LDAF=0.0213;AVGPOST=0.9913;RSQ=0.8405;ERATE=0.0008;THETA=0.0004;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 24952976 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.623;LDAF=0.0045;AVGPOST=0.9966;RSQ=0.7286;ERATE=0.0005;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 24953050 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.499;LDAF=0.0318;AVGPOST=0.9677;RSQ=0.5874;ERATE=0.0039;THETA=0.0002;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 24953060 rs57608944 C CT 1317 PASS INDEL;BAVGPOST=0.738;BRSQ=0.431;LDAF=0.3433;AVGPOST=0.7305;RSQ=0.4920;ERATE=0.0235;THETA=0.0005;AC=656;AN=2184 GT:DS:GL:BD 0.30036631 0
1 24953296 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.934;LDAF=0.0336;AVGPOST=0.9909;RSQ=0.8900;ERATE=0.0010;THETA=0.0005;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 24953462 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5324;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24953511 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0028;AVGPOST=0.9971;RSQ=0.5881;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24953665 . C CT 816 PASS INDEL;BAVGPOST=0.468;BRSQ=0.054;LDAF=0.5918;AVGPOST=0.6983;RSQ=0.4516;ERATE=0.0220;THETA=0.0033;AC=1346;AN=2184 GT:DS:GL:BD 0.61630034 1
1 24953788 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.542;LDAF=0.0024;AVGPOST=0.9962;RSQ=0.2669;ERATE=0.0010;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24953823 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.486;LDAF=0.0028;AVGPOST=0.9963;RSQ=0.4166;ERATE=0.0006;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24953926 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0048;AVGPOST=0.9950;RSQ=0.5761;ERATE=0.0007;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24953963 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.545;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4605;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24953981 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5687;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24953998 . C CTTTGT 192 PASS INDEL;BAVGPOST=1.000;BRSQ=0.718;LDAF=0.0018;AVGPOST=0.9975;RSQ=0.3743;ERATE=0.0007;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24954131 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.580;LDAF=0.0052;AVGPOST=0.9948;RSQ=0.6365;ERATE=0.0007;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 24954206 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.595;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.6438;ERATE=0.0004;THETA=0.0032;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24954209 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.584;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4184;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24954342 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.739;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.8949;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24954966 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5336;AVGPOST=0.9962;RSQ=0.9930;ERATE=0.0006;THETA=0.0004;AC=1165;AN=2184 GT:DS:GL:BD 0.53342491 1
1 24954984 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9829;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 24954989 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6441;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24955147 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8725;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24955154 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24955263 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2321;AVGPOST=0.9955;RSQ=0.9899;ERATE=0.0004;THETA=0.0003;AC=506;AN=2184 GT:DS:GL:BD 0.23168498 0
1 24955312 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4832;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24955459 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0020;AVGPOST=0.9993;RSQ=0.8471;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24955492 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.968;LDAF=0.8280;AVGPOST=0.9877;RSQ=0.9677;ERATE=0.0009;THETA=0.0008;AC=1814;AN=2184 GT:DS:GL:BD 0.83058608 1
1 24955719 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7061;ERATE=0.0007;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24955843 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0020;AVGPOST=0.9977;RSQ=0.4782;ERATE=0.0008;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24955848 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.969;LDAF=0.2697;AVGPOST=0.9920;RSQ=0.9849;ERATE=0.0006;THETA=0.0003;AC=590;AN=2184 GT:DS:GL:BD 0.27014652 0
1 24955875 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0323;AVGPOST=0.9993;RSQ=0.9905;ERATE=0.0003;THETA=0.0008;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 24956008 . ACT A 193 PASS INDEL;BAVGPOST=0.999;BRSQ=0.650;LDAF=0.0025;AVGPOST=0.9985;RSQ=0.7569;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24956018 . C CA 1012 PASS INDEL;BAVGPOST=0.858;BRSQ=0.358;LDAF=0.2054;AVGPOST=0.7568;RSQ=0.3503;ERATE=0.0618;THETA=0.0004;AC=225;AN=2184 GT:DS:GL:BD 0.10302198 0
1 24956065 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2742;AVGPOST=0.9936;RSQ=0.9885;ERATE=0.0007;THETA=0.0006;AC=600;AN=2184 GT:DS:GL:BD 0.27472529 0
1 24956103 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0058;AVGPOST=0.9971;RSQ=0.8176;ERATE=0.0003;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 24956301 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.967;BRSQ=0.922;LDAF=0.2697;AVGPOST=0.9731;RSQ=0.9476;ERATE=0.0027;THETA=0.0046;AC=591;AN=2184 GT:DS:GL:BD 0.27060440 0
1 24956318 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.492;LDAF=0.0236;AVGPOST=0.9774;RSQ=0.6520;ERATE=0.0007;THETA=0.0005;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 24956364 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.517;LDAF=0.0110;AVGPOST=0.9856;RSQ=0.4940;ERATE=0.0009;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 24956465 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0018;AVGPOST=0.9978;RSQ=0.5371;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24956560 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4689;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24956582 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5268;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24956831 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24957152 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.448;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6228;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24957323 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9914;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 24957527 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0759;AVGPOST=0.9999;RSQ=0.9991;ERATE=0.0003;THETA=0.0005;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 24957533 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8526;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24957552 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4969;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24957704 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24957739 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4948;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24957942 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24958178 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4001;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24958386 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4871;ERATE=0.0005;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24958429 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.604;LDAF=0.0032;AVGPOST=0.9952;RSQ=0.3965;ERATE=0.0011;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24958711 rs67661134 C CA 1118 PASS INDEL;BAVGPOST=0.476;BRSQ=0.093;LDAF=0.6610;AVGPOST=0.6591;RSQ=0.3401;ERATE=0.0273;THETA=0.0010;AC=1575;AN=2184 GT:DS:GL:BD 0.72115386 1
1 24958810 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6923;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24958902 . A AC 36 PASS INDEL;BAVGPOST=0.994;BRSQ=0.532;LDAF=0.0077;AVGPOST=0.9906;RSQ=0.4945;ERATE=0.0019;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24959272 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0759;AVGPOST=0.9996;RSQ=0.9975;ERATE=0.0004;THETA=0.0006;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 24959507 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24959534 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0330;AVGPOST=0.9998;RSQ=0.9975;ERATE=0.0003;THETA=0.0006;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 24959560 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=1.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0004;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 24959618 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9871;ERATE=0.0003;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 24959702 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6902;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24959718 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5720;AVGPOST=0.9966;RSQ=0.9939;ERATE=0.0007;THETA=0.0009;AC=1250;AN=2184 GT:DS:GL:BD 0.57234430 1
1 24959844 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.928;LDAF=0.0204;AVGPOST=0.9968;RSQ=0.9395;ERATE=0.0003;THETA=0.0002;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 24959916 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.4670;AVGPOST=0.9951;RSQ=0.9921;ERATE=0.0010;THETA=0.0018;AC=1020;AN=2184 GT:DS:GL:BD 0.46703297 0
1 24959936 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5389;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24959938 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0749;AVGPOST=0.9975;RSQ=0.9898;ERATE=0.0003;THETA=0.0010;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 24959978 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.712;LDAF=0.0024;AVGPOST=0.9963;RSQ=0.3557;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24959983 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0062;AVGPOST=0.9988;RSQ=0.9229;ERATE=0.0004;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 24960156 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.750;LDAF=0.0023;AVGPOST=0.9973;RSQ=0.4475;ERATE=0.0007;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24960162 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.762;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8672;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24960361 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5634;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24960437 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8479;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24960597 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24960707 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.765;LDAF=0.0024;AVGPOST=0.9982;RSQ=0.7262;ERATE=0.0006;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24960804 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.728;LDAF=0.0032;AVGPOST=0.9979;RSQ=0.7120;ERATE=0.0007;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24960917 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.663;LDAF=0.0056;AVGPOST=0.9935;RSQ=0.5243;ERATE=0.0006;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24961516 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8216;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24961544 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0335;AVGPOST=0.9982;RSQ=0.9787;ERATE=0.0004;THETA=0.0027;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 24961667 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0006;AVGPOST=0.9991;RSQ=0.5643;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24961692 . CT C 88 PASS INDEL;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0020;AVGPOST=0.9985;RSQ=0.7098;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24961872 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7629;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24961943 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24962221 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0302;AVGPOST=0.9990;RSQ=0.9881;ERATE=0.0004;THETA=0.0013;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 24962315 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.712;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6858;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24962376 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0087;AVGPOST=0.9990;RSQ=0.9504;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 24962514 . GAT G 9198 PASS INDEL;BAVGPOST=0.981;BRSQ=0.962;LDAF=0.2160;AVGPOST=0.9850;RSQ=0.9638;ERATE=0.0015;THETA=0.0005;AC=473;AN=2184 GT:DS:GL:BD 0.21657509 0
1 24962517 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.964;BRSQ=0.923;LDAF=0.2418;AVGPOST=0.9423;RSQ=0.8786;ERATE=0.0189;THETA=0.0006;AC=502;AN=2184 GT:DS:GL:BD 0.22985348 0
1 24962549 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7986;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24962557 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.923;LDAF=0.0278;AVGPOST=0.9992;RSQ=0.9872;ERATE=0.0003;THETA=0.0006;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 24962703 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0058;AVGPOST=0.9988;RSQ=0.9280;ERATE=0.0003;THETA=0.0011;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 24962784 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24962792 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24962869 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.659;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6982;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24962950 . GTTTCAAC G 591 PASS INDEL;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8622;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24962968 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24962970 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24963131 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0004;AVGPOST=0.9995;RSQ=0.5601;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24963255 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0285;AVGPOST=0.9995;RSQ=0.9925;ERATE=0.0003;THETA=0.0009;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 24963259 . GTCT G 22 PASS INDEL;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6712;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24963439 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6656;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24963518 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9389;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24963647 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0695;AVGPOST=0.9986;RSQ=0.9912;ERATE=0.0004;THETA=0.0005;AC=151;AN=2184 GT:DS:GL:BD 0.06913920 0
1 24963723 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24963754 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24963766 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8807;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24963980 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0013;AVGPOST=0.9996;RSQ=0.8717;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24963996 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24964010 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5664;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24964071 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6177;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24964102 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.2284;AVGPOST=0.9817;RSQ=0.9615;ERATE=0.0009;THETA=0.0005;AC=502;AN=2184 GT:DS:GL:BD 0.22985348 0
1 24964199 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.596;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7388;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24964382 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6295;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24964445 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0284;AVGPOST=0.9999;RSQ=0.9977;ERATE=0.0003;THETA=0.0006;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 24964527 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6808;ERATE=0.0003;THETA=0.0054;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24964737 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.805;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7858;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24964825 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.894;LDAF=0.0148;AVGPOST=0.9985;RSQ=0.9591;ERATE=0.0003;THETA=0.0006;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 24964920 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0057;AVGPOST=0.9968;RSQ=0.8028;ERATE=0.0004;THETA=0.0012;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 24964926 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0057;AVGPOST=0.9996;RSQ=0.9546;ERATE=0.0004;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 24964931 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6934;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24964953 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.983;LDAF=0.5646;AVGPOST=0.9833;RSQ=0.9701;ERATE=0.0008;THETA=0.0007;AC=1237;AN=2184 GT:DS:GL:BD 0.56639194 1
1 24964962 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.740;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4447;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24964993 . C CA 178 PASS INDEL;BAVGPOST=0.997;BRSQ=0.583;LDAF=0.0046;AVGPOST=0.9941;RSQ=0.4946;ERATE=0.0010;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24965145 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.754;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.3859;ERATE=0.0007;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24965151 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0067;AVGPOST=0.9928;RSQ=0.5490;ERATE=0.0030;THETA=0.0011;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 24965151 . AAAAT A 44 PASS INDEL;BAVGPOST=0.995;BRSQ=0.438;LDAF=0.0120;AVGPOST=0.9872;RSQ=0.5813;ERATE=0.0014;THETA=0.0032;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 24965154 rs112700963 AT A 598 PASS INDEL;BAVGPOST=0.971;BRSQ=0.700;LDAF=0.0571;AVGPOST=0.9853;RSQ=0.8919;ERATE=0.0005;THETA=0.0003;AC=123;AN=2184 GT:DS:GL:BD 0.05631868 0
1 24965155 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.811;LDAF=0.0713;AVGPOST=0.9799;RSQ=0.8849;ERATE=0.0027;THETA=0.0011;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 24965173 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0079;AVGPOST=0.9978;RSQ=0.8818;ERATE=0.0004;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 24965180 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.754;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.8967;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24965190 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.550;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5309;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24965241 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0061;AVGPOST=0.9988;RSQ=0.9178;ERATE=0.0004;THETA=0.0044;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 24965266 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5159;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24965281 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4692;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24965312 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0054;AVGPOST=0.9990;RSQ=0.9219;ERATE=0.0003;THETA=0.0070;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 24965499 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0095;AVGPOST=0.9970;RSQ=0.8698;ERATE=0.0007;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 24965525 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0076;AVGPOST=0.9975;RSQ=0.8957;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 24965543 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6752;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24965564 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0023;AVGPOST=0.9986;RSQ=0.7306;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24965573 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.504;LDAF=0.0044;AVGPOST=0.9968;RSQ=0.7036;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 24965627 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6377;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24965641 . T TA 172 PASS INDEL;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.6386;ERATE=0.0004;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24965799 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0375;AVGPOST=0.9982;RSQ=0.9820;ERATE=0.0003;THETA=0.0012;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 24965872 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6373;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24965885 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24965942 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0307;AVGPOST=0.9993;RSQ=0.9899;ERATE=0.0003;THETA=0.0007;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 24966002 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.830;LDAF=0.0068;AVGPOST=0.9974;RSQ=0.8418;ERATE=0.0013;THETA=0.0008;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 24966099 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0338;AVGPOST=0.9996;RSQ=0.9954;ERATE=0.0003;THETA=0.0008;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 24966118 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7739;ERATE=0.0006;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24966142 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24966180 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6272;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24966218 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7462;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24966395 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24966442 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9848;ERATE=0.0003;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 24966551 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7426;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24966567 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0047;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24966755 . G GT 24 PASS INDEL;BAVGPOST=0.999;BRSQ=0.674;LDAF=0.0019;AVGPOST=0.9974;RSQ=0.4083;ERATE=0.0005;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24966803 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0018;AVGPOST=0.9985;RSQ=0.6618;ERATE=0.0004;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24966933 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.985;LDAF=0.1057;AVGPOST=0.9973;RSQ=0.9888;ERATE=0.0005;THETA=0.0006;AC=231;AN=2184 GT:DS:GL:BD 0.10576923 0
1 24966949 . T TA 71 PASS INDEL;BAVGPOST=0.999;BRSQ=0.584;LDAF=0.0026;AVGPOST=0.9972;RSQ=0.5602;ERATE=0.0005;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24967074 . A AG 77 PASS INDEL;BAVGPOST=0.999;BRSQ=0.767;LDAF=0.0022;AVGPOST=0.9974;RSQ=0.5060;ERATE=0.0006;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24967082 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0232;AVGPOST=0.9993;RSQ=0.9860;ERATE=0.0004;THETA=0.0004;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 24967165 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0085;AVGPOST=0.9995;RSQ=0.9705;ERATE=0.0003;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 24967201 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0341;AVGPOST=0.9977;RSQ=0.9742;ERATE=0.0005;THETA=0.0004;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 24967261 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0088;AVGPOST=0.9948;RSQ=0.7664;ERATE=0.0004;THETA=0.0012;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 24967295 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6623;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24967345 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.437;LDAF=0.0015;AVGPOST=0.9983;RSQ=0.5262;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24967371 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0030;AVGPOST=0.9970;RSQ=0.6425;ERATE=0.0006;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24967389 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.670;LDAF=0.0042;AVGPOST=0.9973;RSQ=0.7396;ERATE=0.0004;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24967437 . T TG 10322 PASS INDEL;BAVGPOST=0.957;BRSQ=0.924;LDAF=0.4404;AVGPOST=0.9545;RSQ=0.9332;ERATE=0.0010;THETA=0.0008;AC=972;AN=2184 GT:DS:GL:BD 0.44505495 0
1 24967438 rs34886482 G GC 37988 PASS INDEL;BAVGPOST=0.959;BRSQ=0.928;LDAF=0.4474;AVGPOST=0.9580;RSQ=0.9392;ERATE=0.0005;THETA=0.0005;AC=988;AN=2184 GT:DS:GL:BD 0.45238096 0
1 24967440 . C CT 6783 PASS INDEL;BAVGPOST=0.955;BRSQ=0.922;LDAF=0.4432;AVGPOST=0.9556;RSQ=0.9357;ERATE=0.0007;THETA=0.0006;AC=979;AN=2184 GT:DS:GL:BD 0.44826007 0
1 24967473 . C CCCCATCTG 1191 PASS INDEL;BAVGPOST=0.999;BRSQ=0.714;LDAF=0.0027;AVGPOST=0.9970;RSQ=0.5537;ERATE=0.0005;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24967482 . C CG 59 PASS INDEL;BAVGPOST=0.999;BRSQ=0.519;LDAF=0.0030;AVGPOST=0.9975;RSQ=0.6577;ERATE=0.0004;THETA=0.0025;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24967537 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.804;LDAF=0.0070;AVGPOST=0.9979;RSQ=0.8665;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 24967583 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.684;LDAF=0.0032;AVGPOST=0.9965;RSQ=0.6187;ERATE=0.0005;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24967683 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.825;LDAF=0.0044;AVGPOST=0.9982;RSQ=0.8258;ERATE=0.0007;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 24967687 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0029;AVGPOST=0.9968;RSQ=0.5382;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24967910 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0285;AVGPOST=0.9997;RSQ=0.9948;ERATE=0.0003;THETA=0.0010;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 24967962 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.8056;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24968015 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24968033 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8292;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24968060 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6447;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24968089 . CAGGG C 91 PASS INDEL;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24968206 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.692;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24968220 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9531;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24968290 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.5747;AVGPOST=0.9910;RSQ=0.9844;ERATE=0.0007;THETA=0.0046;AC=1256;AN=2184 GT:DS:GL:BD 0.57509160 1
1 24968457 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0290;AVGPOST=0.9985;RSQ=0.9805;ERATE=0.0004;THETA=0.0021;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 24968809 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.519;LDAF=0.0210;AVGPOST=0.9802;RSQ=0.6202;ERATE=0.0016;THETA=0.0013;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 24969059 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.956;LDAF=0.0228;AVGPOST=0.9975;RSQ=0.9574;ERATE=0.0004;THETA=0.0010;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 24969130 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.966;LDAF=0.0317;AVGPOST=0.9979;RSQ=0.9709;ERATE=0.0006;THETA=0.0009;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 24969252 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5085;ERATE=0.0004;THETA=0.0083;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24969265 . TAC T 451 PASS INDEL;BAVGPOST=0.999;BRSQ=0.719;LDAF=0.0022;AVGPOST=0.9975;RSQ=0.5660;ERATE=0.0004;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24969433 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0065;AVGPOST=0.9995;RSQ=0.9629;ERATE=0.0003;THETA=0.0012;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 24969500 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.694;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5665;ERATE=0.0004;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24969644 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.377;LDAF=0.0037;AVGPOST=0.9935;RSQ=0.3303;ERATE=0.0007;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24969672 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.474;LDAF=0.0065;AVGPOST=0.9916;RSQ=0.4886;ERATE=0.0007;THETA=0.0031;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24969686 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.610;LDAF=0.0026;AVGPOST=0.9957;RSQ=0.2568;ERATE=0.0011;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24969782 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0275;AVGPOST=0.9997;RSQ=0.9952;ERATE=0.0003;THETA=0.0003;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 24969792 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=0.9999;RSQ=0.0499;ERATE=0.0003;THETA=0.0007;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 24969805 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24969829 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.760;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6530;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24969973 rs71032840 AC A 82 PASS INDEL;BAVGPOST=0.536;BRSQ=0.036;LDAF=0.2830;AVGPOST=0.6362;RSQ=0.2406;ERATE=0.0205;THETA=0.0006;AC=340;AN=2184 GT:DS:GL:BD 0.15567766 0
1 24969979 . C CG 213 PASS INDEL;BAVGPOST=0.991;BRSQ=0.464;LDAF=0.0205;AVGPOST=0.9701;RSQ=0.4134;ERATE=0.0012;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 24970138 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.909;LDAF=0.2266;AVGPOST=0.9642;RSQ=0.9153;ERATE=0.0016;THETA=0.0010;AC=491;AN=2184 GT:DS:GL:BD 0.22481684 0
1 24970355 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.359;LDAF=0.0032;AVGPOST=0.9945;RSQ=0.3479;ERATE=0.0007;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24970360 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.591;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4361;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24970483 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0036;AVGPOST=0.9991;RSQ=0.8854;ERATE=0.0005;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24970623 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.983;LDAF=0.0782;AVGPOST=0.9978;RSQ=0.9887;ERATE=0.0005;THETA=0.0011;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 24970738 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.854;LDAF=0.0069;AVGPOST=0.9988;RSQ=0.9156;ERATE=0.0005;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 24970770 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6282;ERATE=0.0005;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24970917 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0046;AVGPOST=0.9990;RSQ=0.9102;ERATE=0.0003;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 24971017 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0063;AVGPOST=0.9998;RSQ=0.9848;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 24971302 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.708;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5274;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24971520 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0003;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24971588 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24971637 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6043;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24971653 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24971739 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.951;LDAF=0.0290;AVGPOST=0.9988;RSQ=0.9826;ERATE=0.0003;THETA=0.0025;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 24971762 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.619;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6396;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24971891 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24971908 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7189;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24971925 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6637;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24971947 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7425;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24971959 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7303;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24972030 . GT G 142 PASS INDEL;BAVGPOST=0.999;BRSQ=0.724;LDAF=0.0033;AVGPOST=0.9972;RSQ=0.6476;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24972041 . C CT 88 PASS INDEL;BAVGPOST=0.999;BRSQ=0.781;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6327;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24972102 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24972153 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24972209 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0033;AVGPOST=0.9994;RSQ=0.9434;ERATE=0.0003;THETA=0.0023;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24972300 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0006;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24972370 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0110;AVGPOST=1.0000;RSQ=0.9980;ERATE=0.0003;THETA=0.0012;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 24972466 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24972650 . A AC 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0016;AVGPOST=0.9988;RSQ=0.6769;ERATE=0.0005;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24972651 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24972795 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.644;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4967;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24972875 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0084;AVGPOST=0.9976;RSQ=0.8972;ERATE=0.0004;THETA=0.0009;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 24972950 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.789;LDAF=0.0059;AVGPOST=0.9982;RSQ=0.8743;ERATE=0.0007;THETA=0.0009;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 24973095 . C CT 138 PASS INDEL;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0033;AVGPOST=0.9976;RSQ=0.6957;ERATE=0.0005;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24973134 rs113328642 T TTAA 5564 PASS INDEL;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0285;AVGPOST=0.9989;RSQ=0.9873;ERATE=0.0003;THETA=0.0006;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 24973343 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24973743 . AAC A 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24973826 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24973889 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24974027 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6008;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24974043 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0280;AVGPOST=0.9998;RSQ=0.9968;ERATE=0.0003;THETA=0.0009;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 24974286 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0066;AVGPOST=0.9991;RSQ=0.9378;ERATE=0.0005;THETA=0.0013;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 24974348 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24974402 . T TCCC 247 PASS INDEL;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4908;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24974674 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7640;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24974840 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24974922 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7425;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24974932 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0083;AVGPOST=0.9998;RSQ=0.9870;ERATE=0.0003;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 24974933 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.7394;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24974955 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9359;ERATE=0.0003;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24975062 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0327;AVGPOST=0.9989;RSQ=0.9864;ERATE=0.0003;THETA=0.0009;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 24975195 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24975215 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0081;AVGPOST=0.9983;RSQ=0.9150;ERATE=0.0010;THETA=0.0011;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 24975225 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24975305 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24975529 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0037;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24975578 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24975580 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24975666 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24975820 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7773;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24975832 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24975874 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.862;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7049;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24975969 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0306;AVGPOST=0.9989;RSQ=0.9871;ERATE=0.0004;THETA=0.0023;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 24976088 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.785;LDAF=0.0024;AVGPOST=0.9971;RSQ=0.5518;ERATE=0.0005;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24976095 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24976161 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9858;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 24976181 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0379;AVGPOST=0.9992;RSQ=0.9917;ERATE=0.0004;THETA=0.0010;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 24976306 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24976341 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9775;ERATE=0.0005;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24976376 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9203;ERATE=0.0004;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24976427 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0013;AVGPOST=0.9999;RSQ=0.9689;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24976430 . CTA C 317 PASS INDEL;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0056;AVGPOST=0.9966;RSQ=0.7714;ERATE=0.0004;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 24976434 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24976477 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0010;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 24976495 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24976571 . CAAG C 60 PASS INDEL;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24976698 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8498;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24976850 . TA T 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.5008;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24976923 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0367;AVGPOST=0.9988;RSQ=0.9866;ERATE=0.0003;THETA=0.0008;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 24977005 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6705;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24977112 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6340;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24977362 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.950;LDAF=0.0106;AVGPOST=0.9984;RSQ=0.9366;ERATE=0.0003;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 24977371 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8366;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24977774 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24977821 . T TA 252 PASS INDEL;BAVGPOST=0.999;BRSQ=0.896;LDAF=0.0049;AVGPOST=0.9991;RSQ=0.9127;ERATE=0.0004;THETA=0.0017;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 24977859 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24977909 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24977934 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24978300 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7621;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24978406 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.991;LDAF=0.4628;AVGPOST=0.9641;RSQ=0.9464;ERATE=0.0017;THETA=0.0009;AC=1017;AN=2184 GT:DS:GL:BD 0.46565935 0
1 24978633 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9333;ERATE=0.0004;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24978917 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.750;LDAF=0.0311;AVGPOST=0.9815;RSQ=0.7759;ERATE=0.0221;THETA=0.0009;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 24979018 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8890;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24979071 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24979269 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24979273 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24979358 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0101;AVGPOST=0.9999;RSQ=0.9937;ERATE=0.0004;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 24979467 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24979487 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0018;AVGPOST=0.9999;RSQ=0.9668;ERATE=0.0003;THETA=0.0014;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24979608 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24979624 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24979635 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8824;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24979682 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24979689 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24979744 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0022;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24979934 . G GA 23 PASS INDEL;BAVGPOST=1.000;BRSQ=0.750;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.5306;ERATE=0.0006;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24980049 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.521;LDAF=0.0041;AVGPOST=0.9963;RSQ=0.6488;ERATE=0.0007;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24980111 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5627;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24980295 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.717;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7554;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24980296 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5766;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24980320 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.8147;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24980340 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24980358 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5655;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24980409 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.974;LDAF=0.0372;AVGPOST=0.9986;RSQ=0.9822;ERATE=0.0003;THETA=0.0008;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 24980443 . C CAG 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.765;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5301;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24980468 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.594;LDAF=0.0201;AVGPOST=0.9781;RSQ=0.5734;ERATE=0.0061;THETA=0.0010;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 24980492 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6830;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24980858 . TAAC T 181 PASS INDEL;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5858;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24980954 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0021;AVGPOST=0.9990;RSQ=0.7900;ERATE=0.0006;THETA=0.0031;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24981064 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0065;AVGPOST=0.9981;RSQ=0.8931;ERATE=0.0004;THETA=0.0009;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 24981301 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24981392 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0008;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 24981406 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9756;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24981439 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0366;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0009;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 24981454 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24981475 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0007;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 24981520 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24981540 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24981546 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 24981549 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0500;ERATE=0.0003;THETA=0.0012;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 24981556 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 24981585 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24981622 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 24981632 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24981636 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24981648 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24981755 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24981759 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24981771 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0004;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24981825 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2102;AVGPOST=0.9957;RSQ=0.9884;ERATE=0.0005;THETA=0.0008;AC=458;AN=2184 GT:DS:GL:BD 0.20970696 0
1 24981835 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24981947 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9996;RSQ=0.9767;ERATE=0.0003;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 24981986 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0303;AVGPOST=0.9994;RSQ=0.9923;ERATE=0.0003;THETA=0.0011;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 24982008 . TTC T 1876 PASS INDEL;BAVGPOST=0.993;BRSQ=0.729;LDAF=0.0139;AVGPOST=0.9959;RSQ=0.8796;ERATE=0.0006;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 24982034 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24982410 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6061;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24982539 . T TCAGCCCCA 292 PASS INDEL;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6077;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24982599 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.863;LDAF=0.0081;AVGPOST=0.9987;RSQ=0.9244;ERATE=0.0003;THETA=0.0019;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 24982767 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24982863 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9335;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24982871 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24982922 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.757;LDAF=0.0027;AVGPOST=0.9982;RSQ=0.7120;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24983066 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9244;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24983114 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24983333 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.473;LDAF=0.0045;AVGPOST=0.9946;RSQ=0.5333;ERATE=0.0011;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 24983378 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0307;AVGPOST=0.9998;RSQ=0.9972;ERATE=0.0003;THETA=0.0007;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 24983385 . CAA C 171 PASS INDEL;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6338;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24983401 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6588;ERATE=0.0004;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24983506 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5581;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24983614 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24983840 . GT G 124 PASS INDEL;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24984185 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0371;AVGPOST=0.9995;RSQ=0.9939;ERATE=0.0004;THETA=0.0011;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 24984210 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9847;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 24984235 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.805;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7458;ERATE=0.0003;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24984397 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0019;AVGPOST=0.9992;RSQ=0.8240;ERATE=0.0007;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24984445 . GATTAATA G 148 PASS INDEL;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24984449 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24984612 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8667;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24984622 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24984724 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.571;LDAF=0.0194;AVGPOST=0.9931;RSQ=0.8517;ERATE=0.0005;THETA=0.0019;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 24984826 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0066;AVGPOST=0.9985;RSQ=0.9003;ERATE=0.0004;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 24984879 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6526;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24984939 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5956;ERATE=0.0003;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24984965 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7149;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24984973 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.994;LDAF=0.4645;AVGPOST=0.9896;RSQ=0.9828;ERATE=0.0005;THETA=0.0006;AC=1013;AN=2184 GT:DS:GL:BD 0.46382785 0
1 24985072 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24985267 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0319;AVGPOST=0.9971;RSQ=0.9675;ERATE=0.0005;THETA=0.0006;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 24985285 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0367;AVGPOST=0.9993;RSQ=0.9908;ERATE=0.0004;THETA=0.0012;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 24985426 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.664;LDAF=0.0025;AVGPOST=0.9984;RSQ=0.6948;ERATE=0.0010;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24985490 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.742;LDAF=0.0023;AVGPOST=0.9984;RSQ=0.7177;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24985492 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6599;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24985513 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.659;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6021;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24985569 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.837;LDAF=0.0125;AVGPOST=0.9918;RSQ=0.7547;ERATE=0.0004;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 24985697 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.571;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7272;ERATE=0.0006;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24985770 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24986054 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24986070 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24986167 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0366;AVGPOST=0.9996;RSQ=0.9951;ERATE=0.0004;THETA=0.0007;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 24986204 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.868;LDAF=0.0061;AVGPOST=0.9980;RSQ=0.8861;ERATE=0.0004;THETA=0.0009;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 24986210 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0065;AVGPOST=0.9995;RSQ=0.9665;ERATE=0.0003;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 24986233 . A ATAC 2821 PASS INDEL;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0309;AVGPOST=0.9993;RSQ=0.9893;ERATE=0.0004;THETA=0.0005;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 24986294 . CTA C 652 PASS INDEL;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0045;AVGPOST=0.9981;RSQ=0.8373;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 24986300 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0017;AVGPOST=0.9995;RSQ=0.8949;ERATE=0.0003;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24986603 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4829;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24986670 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0045;AVGPOST=0.9978;RSQ=0.8228;ERATE=0.0003;THETA=0.0014;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 24986751 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6730;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24986765 . CAGT C 1193 PASS INDEL;BAVGPOST=0.998;BRSQ=0.859;LDAF=0.0086;AVGPOST=0.9969;RSQ=0.8471;ERATE=0.0003;THETA=0.0015;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 24986877 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.7799;AVGPOST=0.9906;RSQ=0.9790;ERATE=0.0018;THETA=0.0009;AC=1708;AN=2184 GT:DS:GL:BD 0.78205127 1
1 24987045 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8304;ERATE=0.0007;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24987130 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0088;AVGPOST=0.9989;RSQ=0.9451;ERATE=0.0005;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 24987177 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0087;AVGPOST=1.0000;RSQ=0.9975;ERATE=0.0003;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 24987229 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24987299 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=1.0000;RSQ=0.9960;ERATE=0.0003;THETA=0.0016;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 24987302 rs58604320 G GT 3157 PASS INDEL;BAVGPOST=0.966;BRSQ=0.740;LDAF=0.0901;AVGPOST=0.9276;RSQ=0.6409;ERATE=0.0267;THETA=0.0006;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 24987310 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8383;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24987329 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24987350 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24987434 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24987514 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0013;AVGPOST=0.9996;RSQ=0.8760;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24987670 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0519;AVGPOST=0.9991;RSQ=0.9925;ERATE=0.0004;THETA=0.0010;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 24987791 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0023;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24987792 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0013;AVGPOST=1.0000;RSQ=0.9839;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24988117 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24988157 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6004;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24988216 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0082;AVGPOST=0.9990;RSQ=0.9579;ERATE=0.0003;THETA=0.0018;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 24988225 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0306;AVGPOST=0.9998;RSQ=0.9973;ERATE=0.0003;THETA=0.0011;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 24988294 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9208;ERATE=0.0004;THETA=0.0014;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24988414 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6112;ERATE=0.0005;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24988445 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.969;LDAF=0.0385;AVGPOST=0.9962;RSQ=0.9649;ERATE=0.0004;THETA=0.0008;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 24988470 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24988589 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24988600 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.862;LDAF=0.0051;AVGPOST=0.9988;RSQ=0.8976;ERATE=0.0004;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 24988630 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8351;ERATE=0.0004;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24988774 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5658;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24988793 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5212;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24988822 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5372;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24988829 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24988896 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0366;AVGPOST=0.9994;RSQ=0.9923;ERATE=0.0003;THETA=0.0006;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 24989009 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24989015 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7600;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24989157 . GCTC G 112 PASS INDEL;BAVGPOST=0.998;BRSQ=0.724;LDAF=0.0054;AVGPOST=0.9941;RSQ=0.5201;ERATE=0.0024;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24989159 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0008;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24989390 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 24989615 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24989762 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.934;LDAF=0.9866;AVGPOST=0.9973;RSQ=0.9123;ERATE=0.0004;THETA=0.0012;AC=2156;AN=2184 GT:DS:GL:BD 0.98717946 1
1 24989862 . A AT 858 PASS INDEL;BAVGPOST=0.996;BRSQ=0.827;LDAF=0.0170;AVGPOST=0.9901;RSQ=0.7630;ERATE=0.0021;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 24989960 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.770;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.7660;ERATE=0.0003;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24990194 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0037;AVGPOST=0.9977;RSQ=0.7776;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24990239 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.691;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.3581;ERATE=0.0008;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24990376 . A AATT 104 PASS INDEL;BAVGPOST=0.993;BRSQ=0.287;LDAF=0.0028;AVGPOST=0.9952;RSQ=0.3175;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24990455 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5337;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24990473 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.979;LDAF=0.1071;AVGPOST=0.9962;RSQ=0.9846;ERATE=0.0007;THETA=0.0006;AC=233;AN=2184 GT:DS:GL:BD 0.10668498 0
1 24990718 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.731;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5369;ERATE=0.0005;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24990750 . G GT 57 PASS INDEL;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4278;ERATE=0.0007;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24990790 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0094;AVGPOST=0.9995;RSQ=0.9811;ERATE=0.0003;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 24990805 . CTT C 759 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0050;AVGPOST=0.9992;RSQ=0.9263;ERATE=0.0004;THETA=0.0017;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 24990814 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5367;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24991020 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0081;AVGPOST=0.9992;RSQ=0.9622;ERATE=0.0004;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 24991447 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0310;AVGPOST=0.9994;RSQ=0.9915;ERATE=0.0003;THETA=0.0010;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 24991539 . GC G 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.736;LDAF=0.0023;AVGPOST=0.9965;RSQ=0.4156;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24991547 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0034;AVGPOST=0.9994;RSQ=0.9338;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24991646 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6467;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24991683 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.627;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.5903;ERATE=0.0005;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24991712 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0014;AVGPOST=0.9979;RSQ=0.3724;ERATE=0.0005;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24991796 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.719;LDAF=0.0221;AVGPOST=0.9870;RSQ=0.7818;ERATE=0.0009;THETA=0.0008;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 24991909 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.633;LDAF=0.0045;AVGPOST=0.9944;RSQ=0.5063;ERATE=0.0012;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24991973 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0151;AVGPOST=0.9979;RSQ=0.9313;ERATE=0.0008;THETA=0.0011;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 24991986 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0338;AVGPOST=0.9981;RSQ=0.9801;ERATE=0.0003;THETA=0.0012;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 24992305 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0265;AVGPOST=0.9992;RSQ=0.9890;ERATE=0.0003;THETA=0.0007;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 24992387 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24992539 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.672;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7190;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24992744 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0018;AVGPOST=0.9997;RSQ=0.9335;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24992757 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24992767 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6108;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24992897 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24992916 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0258;AVGPOST=0.9995;RSQ=0.9921;ERATE=0.0003;THETA=0.0004;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 24993050 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.644;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.5487;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24993101 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.948;LDAF=0.0359;AVGPOST=0.9963;RSQ=0.9581;ERATE=0.0005;THETA=0.0009;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 24993106 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5592;ERATE=0.0005;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24993160 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0274;AVGPOST=1.0000;RSQ=0.9992;ERATE=0.0003;THETA=0.0010;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 24993181 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24993188 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.0054;AVGPOST=0.9993;RSQ=0.9406;ERATE=0.0003;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 24993233 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24993247 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6365;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24993290 . ATTC A 692 PASS INDEL;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0039;AVGPOST=0.9994;RSQ=0.9226;ERATE=0.0004;THETA=0.0019;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 24993427 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24993463 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24993550 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24993654 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8090;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24993768 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6162;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24994020 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0003;AVGPOST=0.9995;RSQ=0.3042;ERATE=0.0003;THETA=0.0011;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 24994100 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9548;ERATE=0.0004;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 24994193 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.6094;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24994281 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24994297 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.666;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6656;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24994340 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7276;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24994528 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.763;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5771;ERATE=0.0005;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24994732 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24994822 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0302;AVGPOST=0.9997;RSQ=0.9952;ERATE=0.0003;THETA=0.0018;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 24994960 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0004;AVGPOST=0.9998;RSQ=0.7709;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24995027 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.834;LDAF=0.0024;AVGPOST=0.9991;RSQ=0.8399;ERATE=0.0004;THETA=0.0016;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24995037 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7497;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24995186 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0059;AVGPOST=0.9982;RSQ=0.8787;ERATE=0.0007;THETA=0.0040;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 24995237 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0276;AVGPOST=0.9992;RSQ=0.9886;ERATE=0.0003;THETA=0.0006;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 24995239 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24995272 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0287;AVGPOST=0.9986;RSQ=0.9824;ERATE=0.0003;THETA=0.0005;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 24995304 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9321;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24995456 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0408;AVGPOST=0.9997;RSQ=0.9970;ERATE=0.0003;THETA=0.0013;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 24995461 . ATTT A 38 PASS INDEL;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5029;ERATE=0.0005;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24995497 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24995502 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24995511 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0003;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24995566 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0003;THETA=0.0012;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24995583 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24995631 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7425;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24995634 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24995642 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24995796 . CCAAA C 55 PASS INDEL;BAVGPOST=0.998;BRSQ=0.793;LDAF=0.0094;AVGPOST=0.9891;RSQ=0.5453;ERATE=0.0038;THETA=0.0009;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 24995872 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24995906 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24995966 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24996089 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0082;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0012;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 24996220 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8190;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24996373 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8890;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24996583 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24996724 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24996736 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24996766 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24996787 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24996985 rs68191022 CATCTGTTTTTT C 1778 PASS INDEL;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0080;AVGPOST=0.9987;RSQ=0.9340;ERATE=0.0005;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 24996990 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24997201 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8474;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24997287 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24997296 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7822;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24997337 . ATAT A 207 PASS INDEL;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0025;AVGPOST=0.9983;RSQ=0.7324;ERATE=0.0004;THETA=0.0014;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24997374 . TAA T 279 PASS INDEL;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7000;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24997419 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8270;ERATE=0.0003;THETA=0.0025;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24997549 . TATTCTC T 25509 PASS INDEL;BAVGPOST=0.979;BRSQ=0.942;LDAF=0.2019;AVGPOST=0.9767;RSQ=0.9434;ERATE=0.0004;THETA=0.0013;AC=449;AN=2184 GT:DS:GL:BD 0.20558608 0
1 24997596 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24997690 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24997807 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 24997815 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0036;AVGPOST=0.9999;RSQ=0.9836;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 24997828 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24997857 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24997859 . G GT 102 PASS INDEL;BAVGPOST=0.980;BRSQ=0.497;LDAF=0.0338;AVGPOST=0.9574;RSQ=0.4770;ERATE=0.0117;THETA=0.0008;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 24998050 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0032;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 24998126 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24998266 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.7400;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24998355 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6070;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24998398 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8772;ERATE=0.0005;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24998459 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.740;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.6263;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24998465 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0059;AVGPOST=0.9984;RSQ=0.8837;ERATE=0.0004;THETA=0.0022;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 24998519 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9607;ERATE=0.0003;THETA=0.0022;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 24998659 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 24998750 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 24999012 . C CA 21 PASS INDEL;BAVGPOST=0.996;BRSQ=0.371;LDAF=0.0096;AVGPOST=0.9888;RSQ=0.5379;ERATE=0.0017;THETA=0.0013;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 24999146 . TTTC T 611 PASS INDEL;BAVGPOST=0.998;BRSQ=0.849;LDAF=0.0077;AVGPOST=0.9985;RSQ=0.9109;ERATE=0.0009;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 24999149 . C CT 55 PASS INDEL;BAVGPOST=0.997;BRSQ=0.688;LDAF=0.0063;AVGPOST=0.9964;RSQ=0.7930;ERATE=0.0005;THETA=0.0020;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 24999325 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9414;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 24999361 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0708;AVGPOST=0.9971;RSQ=0.9855;ERATE=0.0005;THETA=0.0007;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 24999425 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7608;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 24999454 . G GT 55 PASS INDEL;BAVGPOST=0.994;BRSQ=0.535;LDAF=0.0112;AVGPOST=0.9846;RSQ=0.4636;ERATE=0.0038;THETA=0.0014;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 24999468 . G GT 203 PASS INDEL;BAVGPOST=0.991;BRSQ=0.492;LDAF=0.0125;AVGPOST=0.9844;RSQ=0.5023;ERATE=0.0038;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 24999518 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0184;AVGPOST=0.9983;RSQ=0.9633;ERATE=0.0004;THETA=0.0023;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 24999768 . TCTTA T 370 PASS INDEL;BAVGPOST=0.998;BRSQ=0.881;LDAF=0.0095;AVGPOST=0.9946;RSQ=0.7745;ERATE=0.0013;THETA=0.0009;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 24999885 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.852;LDAF=0.0081;AVGPOST=0.9969;RSQ=0.8357;ERATE=0.0004;THETA=0.0022;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 24999983 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6313;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25000107 . CGT C 31 PASS INDEL;BAVGPOST=0.994;BRSQ=0.545;LDAF=0.0149;AVGPOST=0.9784;RSQ=0.3849;ERATE=0.0037;THETA=0.0015;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25000117 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.982;LDAF=0.0741;AVGPOST=0.9867;RSQ=0.9221;ERATE=0.0029;THETA=0.0011;AC=157;AN=2184 GT:DS:GL:BD 0.07188645 0
1 25000127 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.690;LDAF=0.0041;AVGPOST=0.9955;RSQ=0.5350;ERATE=0.0010;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25000222 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25000280 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7662;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25000282 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25000357 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9330;ERATE=0.0003;THETA=0.0015;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25000424 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0279;AVGPOST=0.9990;RSQ=0.9827;ERATE=0.0005;THETA=0.0012;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 25000444 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.641;LDAF=0.0024;AVGPOST=0.9980;RSQ=0.6696;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25000495 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.972;LDAF=0.4655;AVGPOST=0.9651;RSQ=0.9438;ERATE=0.0008;THETA=0.0009;AC=1026;AN=2184 GT:DS:GL:BD 0.46978021 0
1 25000556 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9987;RSQ=0.8507;ERATE=0.0003;THETA=0.0013;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25000635 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.837;LDAF=0.0066;AVGPOST=0.9968;RSQ=0.7984;ERATE=0.0003;THETA=0.0010;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 25000647 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5048;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25000691 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8070;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25000733 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0225;AVGPOST=0.9999;RSQ=0.9971;ERATE=0.0003;THETA=0.0013;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 25000835 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25000951 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25001089 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0064;AVGPOST=0.9998;RSQ=0.9872;ERATE=0.0003;THETA=0.0016;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 25001207 . GC G 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6469;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25001297 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0073;AVGPOST=0.9972;RSQ=0.8430;ERATE=0.0008;THETA=0.0018;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 25001302 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7332;ERATE=0.0004;THETA=0.0031;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25001538 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25001704 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25001722 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4734;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25001767 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.454;LDAF=0.0016;AVGPOST=0.9975;RSQ=0.3088;ERATE=0.0008;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25001807 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.530;LDAF=0.0082;AVGPOST=0.9940;RSQ=0.6969;ERATE=0.0008;THETA=0.0012;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 25001891 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.467;LDAF=0.0113;AVGPOST=0.9845;RSQ=0.4382;ERATE=0.0017;THETA=0.0014;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 25001905 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.946;LDAF=0.0416;AVGPOST=0.9832;RSQ=0.8174;ERATE=0.0021;THETA=0.0005;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 25002084 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0029;AVGPOST=0.9988;RSQ=0.8374;ERATE=0.0004;THETA=0.0017;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25002110 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6160;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25002337 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4705;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25002338 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25002403 rs72389919 CCT C 4323 PASS INDEL;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0277;AVGPOST=0.9994;RSQ=0.9892;ERATE=0.0004;THETA=0.0011;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 25002463 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.869;LDAF=0.0061;AVGPOST=0.9984;RSQ=0.8762;ERATE=0.0004;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 25002474 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6029;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25002603 . AG A 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.735;LDAF=0.0035;AVGPOST=0.9972;RSQ=0.6953;ERATE=0.0006;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25002609 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0025;AVGPOST=0.9984;RSQ=0.7220;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25002610 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0037;AVGPOST=0.9979;RSQ=0.7640;ERATE=0.0005;THETA=0.0014;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25002633 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.592;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5979;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25002664 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.884;LDAF=0.0072;AVGPOST=0.9973;RSQ=0.8474;ERATE=0.0007;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 25002714 . A AT 479 PASS INDEL;BAVGPOST=0.860;BRSQ=0.305;LDAF=0.1851;AVGPOST=0.7726;RSQ=0.3780;ERATE=0.0276;THETA=0.0004;AC=220;AN=2184 GT:DS:GL:BD 0.10073260 0
1 25002782 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.859;LDAF=0.0361;AVGPOST=0.9853;RSQ=0.8302;ERATE=0.0019;THETA=0.0006;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 25002792 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.633;LDAF=0.0023;AVGPOST=0.9963;RSQ=0.3903;ERATE=0.0006;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25002943 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.585;LDAF=0.0025;AVGPOST=0.9975;RSQ=0.5894;ERATE=0.0006;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25003270 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0280;AVGPOST=0.9997;RSQ=0.9952;ERATE=0.0004;THETA=0.0020;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 25003305 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7242;ERATE=0.0003;THETA=0.0034;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25003429 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0058;AVGPOST=0.9976;RSQ=0.8523;ERATE=0.0003;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25003478 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25003538 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9607;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25003541 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.9053;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25003663 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0037;AVGPOST=0.9990;RSQ=0.8923;ERATE=0.0012;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25003748 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0367;AVGPOST=0.9982;RSQ=0.9776;ERATE=0.0004;THETA=0.0011;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 25003791 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25003812 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25003961 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6313;ERATE=0.0005;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25004156 . CA C 51 PASS INDEL;BAVGPOST=0.998;BRSQ=0.769;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5168;ERATE=0.0005;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25004296 . ATCTC A 462 PASS INDEL;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25004380 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25004459 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7386;ERATE=0.0004;THETA=0.0022;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25004472 . CTTTTT C 89 PASS INDEL;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5729;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25004743 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.975;LDAF=0.3660;AVGPOST=0.9880;RSQ=0.9791;ERATE=0.0006;THETA=0.0009;AC=800;AN=2184 GT:DS:GL:BD 0.36630037 0
1 25004756 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0081;AVGPOST=0.9990;RSQ=0.9466;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 25004828 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.636;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4509;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25004966 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9905;ERATE=0.0003;THETA=0.0041;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25005226 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9767;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25005297 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25005321 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6171;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25005383 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25005521 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9574;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25005524 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9676;ERATE=0.0004;THETA=0.0011;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25005537 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25005555 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25005852 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5959;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25005858 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7393;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25005900 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0276;AVGPOST=0.9996;RSQ=0.9928;ERATE=0.0003;THETA=0.0017;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 25006104 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0076;AVGPOST=0.9961;RSQ=0.8276;ERATE=0.0003;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 25006110 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.4634;AVGPOST=0.9856;RSQ=0.9759;ERATE=0.0006;THETA=0.0007;AC=1013;AN=2184 GT:DS:GL:BD 0.46382785 0
1 25006138 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4322;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25006227 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5581;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25006298 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6786;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25006450 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0279;AVGPOST=1.0000;RSQ=0.9992;ERATE=0.0003;THETA=0.0014;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 25006476 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.6388;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25006743 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6636;ERATE=0.0005;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25006807 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.820;LDAF=0.0094;AVGPOST=0.9964;RSQ=0.8602;ERATE=0.0004;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 25006873 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.777;LDAF=0.0353;AVGPOST=0.9848;RSQ=0.8339;ERATE=0.0008;THETA=0.0007;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 25006961 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.645;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.7330;ERATE=0.0004;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25006962 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.976;LDAF=0.0378;AVGPOST=0.9952;RSQ=0.9410;ERATE=0.0008;THETA=0.0018;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 25007062 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0229;AVGPOST=0.9991;RSQ=0.9836;ERATE=0.0003;THETA=0.0016;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 25007070 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5390;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25007239 . TC T 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7239;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25007293 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.590;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4592;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25007308 . C CT 201 PASS INDEL;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4756;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25007392 rs112478637 G GA 1791 PASS INDEL;BAVGPOST=0.980;BRSQ=0.771;LDAF=0.0625;AVGPOST=0.9531;RSQ=0.6756;ERATE=0.0104;THETA=0.0004;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 25007399 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.656;LDAF=0.0018;AVGPOST=0.9974;RSQ=0.4887;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25007415 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25007420 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0026;AVGPOST=0.9970;RSQ=0.5935;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25007585 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25007710 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0026;AVGPOST=0.9985;RSQ=0.7540;ERATE=0.0005;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25007749 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9550;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25007758 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0028;AVGPOST=0.9967;RSQ=0.5622;ERATE=0.0008;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25007839 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4499;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25007864 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0047;AVGPOST=0.9987;RSQ=0.8947;ERATE=0.0003;THETA=0.0012;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25008003 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9766;ERATE=0.0003;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25008050 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4718;ERATE=0.0006;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25008151 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.835;LDAF=0.0048;AVGPOST=0.9984;RSQ=0.9033;ERATE=0.0003;THETA=0.0016;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25008179 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5844;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25008506 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5628;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25008515 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.907;LDAF=0.0076;AVGPOST=0.9975;RSQ=0.8750;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 25008603 . TTTTA T 128 PASS INDEL;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5854;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25008854 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5594;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25008859 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8515;ERATE=0.0005;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25009044 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6523;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25009126 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0109;AVGPOST=0.9992;RSQ=0.9673;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 25009209 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0049;AVGPOST=0.9993;RSQ=0.9429;ERATE=0.0003;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25009489 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25009577 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4596;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25009583 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.930;LDAF=0.0141;AVGPOST=0.9948;RSQ=0.8843;ERATE=0.0004;THETA=0.0034;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 25009584 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7712;ERATE=0.0004;THETA=0.0014;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25009632 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4468;ERATE=0.0005;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25009638 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.430;LDAF=0.0039;AVGPOST=0.9965;RSQ=0.6472;ERATE=0.0006;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25009710 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4703;ERATE=0.0005;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25009787 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5392;ERATE=0.0005;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25009899 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.945;LDAF=0.0307;AVGPOST=0.9951;RSQ=0.9380;ERATE=0.0010;THETA=0.0004;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 25009921 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.3635;ERATE=0.0006;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25009942 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5492;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25010089 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.894;LDAF=0.0098;AVGPOST=0.9947;RSQ=0.7859;ERATE=0.0005;THETA=0.0010;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 25010111 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6171;ERATE=0.0004;THETA=0.0036;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25010115 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.964;LDAF=0.0229;AVGPOST=0.9994;RSQ=0.9885;ERATE=0.0003;THETA=0.0010;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 25010124 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5854;ERATE=0.0004;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25010221 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0041;AVGPOST=0.9972;RSQ=0.7627;ERATE=0.0006;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25010225 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.8202;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25010296 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5963;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25010359 . C CTA 276 PASS INDEL;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8033;ERATE=0.0005;THETA=0.0013;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25010414 . A AGCTT 291 PASS INDEL;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0052;AVGPOST=0.9958;RSQ=0.6694;ERATE=0.0006;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25010418 . T TGC 109 PASS INDEL;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0071;AVGPOST=0.9959;RSQ=0.7658;ERATE=0.0003;THETA=0.0012;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 25010474 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0065;AVGPOST=0.9977;RSQ=0.8592;ERATE=0.0004;THETA=0.0009;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 25010522 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0275;AVGPOST=0.9991;RSQ=0.9854;ERATE=0.0003;THETA=0.0004;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 25010576 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6649;ERATE=0.0006;THETA=0.0023;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25010687 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1392;AVGPOST=0.9984;RSQ=0.9944;ERATE=0.0005;THETA=0.0007;AC=304;AN=2184 GT:DS:GL:BD 0.13919415 0
1 25010693 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25010749 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.909;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9590;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25010761 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5023;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25010773 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.861;LDAF=0.0093;AVGPOST=0.9971;RSQ=0.8846;ERATE=0.0004;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 25011007 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.753;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.5806;ERATE=0.0006;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25011051 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1418;AVGPOST=0.9879;RSQ=0.9644;ERATE=0.0012;THETA=0.0003;AC=303;AN=2184 GT:DS:GL:BD 0.13873626 0
1 25011063 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1374;AVGPOST=0.9943;RSQ=0.9824;ERATE=0.0006;THETA=0.0006;AC=302;AN=2184 GT:DS:GL:BD 0.13827839 0
1 25011130 rs11413879 C CA 31273 PASS INDEL;BAVGPOST=0.973;BRSQ=0.935;LDAF=0.7559;AVGPOST=0.9378;RSQ=0.8734;ERATE=0.0054;THETA=0.0009;AC=1679;AN=2184 GT:DS:GL:BD 0.76877290 1
1 25011209 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.804;LDAF=0.0157;AVGPOST=0.9928;RSQ=0.8051;ERATE=0.0005;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 25011345 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.984;LDAF=0.4245;AVGPOST=0.9850;RSQ=0.9753;ERATE=0.0006;THETA=0.0008;AC=933;AN=2184 GT:DS:GL:BD 0.42719781 0
1 25011440 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1394;AVGPOST=0.9975;RSQ=0.9914;ERATE=0.0006;THETA=0.0029;AC=304;AN=2184 GT:DS:GL:BD 0.13919415 0
1 25011712 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.839;LDAF=0.0102;AVGPOST=0.9948;RSQ=0.7960;ERATE=0.0006;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 25011726 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.358;LDAF=0.0043;AVGPOST=0.9946;RSQ=0.4685;ERATE=0.0011;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25011810 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0058;AVGPOST=0.9953;RSQ=0.6824;ERATE=0.0005;THETA=0.0029;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25012020 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25012117 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7092;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25012162 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1396;AVGPOST=0.9995;RSQ=0.9982;ERATE=0.0004;THETA=0.0025;AC=305;AN=2184 GT:DS:GL:BD 0.13965201 0
1 25012224 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1395;AVGPOST=0.9995;RSQ=0.9982;ERATE=0.0004;THETA=0.0013;AC=305;AN=2184 GT:DS:GL:BD 0.13965201 0
1 25012260 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6314;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25012287 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0694;AVGPOST=0.9987;RSQ=0.9912;ERATE=0.0004;THETA=0.0005;AC=151;AN=2184 GT:DS:GL:BD 0.06913920 0
1 25012350 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.768;LDAF=0.0037;AVGPOST=0.9978;RSQ=0.7456;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25012354 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0049;AVGPOST=0.9992;RSQ=0.9373;ERATE=0.0004;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25012492 . TC T 799 PASS INDEL;BAVGPOST=0.935;BRSQ=0.572;LDAF=0.0793;AVGPOST=0.9555;RSQ=0.7799;ERATE=0.0035;THETA=0.0006;AC=157;AN=2184 GT:DS:GL:BD 0.07188645 0
1 25012493 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.1398;AVGPOST=0.9985;RSQ=0.9947;ERATE=0.0005;THETA=0.0012;AC=305;AN=2184 GT:DS:GL:BD 0.13965201 0
1 25012595 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.977;LDAF=0.0304;AVGPOST=0.9955;RSQ=0.9476;ERATE=0.0005;THETA=0.0008;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 25012644 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0062;AVGPOST=0.9977;RSQ=0.8489;ERATE=0.0005;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25012694 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0027;AVGPOST=0.9966;RSQ=0.5205;ERATE=0.0006;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25012813 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.881;LDAF=0.0261;AVGPOST=0.9943;RSQ=0.9142;ERATE=0.0004;THETA=0.0008;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 25012896 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5826;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25012973 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.742;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5305;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25013015 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.927;LDAF=0.1361;AVGPOST=0.9918;RSQ=0.9721;ERATE=0.0010;THETA=0.0009;AC=299;AN=2184 GT:DS:GL:BD 0.13690476 0
1 25013070 rs11450069 A AG 5585 PASS INDEL;BAVGPOST=0.963;BRSQ=0.844;LDAF=0.1228;AVGPOST=0.9736;RSQ=0.9174;ERATE=0.0022;THETA=0.0005;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 25013103 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.908;LDAF=0.1205;AVGPOST=0.9854;RSQ=0.9541;ERATE=0.0004;THETA=0.0009;AC=265;AN=2184 GT:DS:GL:BD 0.12133700 0
1 25013115 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.909;LDAF=0.1220;AVGPOST=0.9846;RSQ=0.9506;ERATE=0.0013;THETA=0.0006;AC=266;AN=2184 GT:DS:GL:BD 0.12179487 0
1 25013248 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.850;LDAF=0.0272;AVGPOST=0.9941;RSQ=0.9117;ERATE=0.0004;THETA=0.0004;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 25013286 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.975;LDAF=0.1488;AVGPOST=0.9877;RSQ=0.9629;ERATE=0.0004;THETA=0.0009;AC=321;AN=2184 GT:DS:GL:BD 0.14697802 0
1 25013362 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.961;LDAF=0.0238;AVGPOST=0.9968;RSQ=0.9431;ERATE=0.0004;THETA=0.0009;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 25013444 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0690;AVGPOST=0.9977;RSQ=0.9865;ERATE=0.0005;THETA=0.0005;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 25013520 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.589;LDAF=0.0038;AVGPOST=0.9976;RSQ=0.7505;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25013523 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.644;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7312;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25013544 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1375;AVGPOST=0.9962;RSQ=0.9879;ERATE=0.0005;THETA=0.0002;AC=302;AN=2184 GT:DS:GL:BD 0.13827839 0
1 25013580 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.921;LDAF=0.1364;AVGPOST=0.9868;RSQ=0.9613;ERATE=0.0018;THETA=0.0003;AC=299;AN=2184 GT:DS:GL:BD 0.13690476 0
1 25013601 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.927;LDAF=0.1347;AVGPOST=0.9944;RSQ=0.9815;ERATE=0.0005;THETA=0.0002;AC=296;AN=2184 GT:DS:GL:BD 0.13553114 0
1 25013637 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0064;AVGPOST=0.9967;RSQ=0.8027;ERATE=0.0004;THETA=0.0014;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 25013717 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.952;LDAF=0.1375;AVGPOST=0.9953;RSQ=0.9846;ERATE=0.0006;THETA=0.0008;AC=300;AN=2184 GT:DS:GL:BD 0.13736264 0
1 25013765 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.981;LDAF=0.1377;AVGPOST=0.9968;RSQ=0.9893;ERATE=0.0008;THETA=0.0002;AC=300;AN=2184 GT:DS:GL:BD 0.13736264 0
1 25013777 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.977;LDAF=0.4298;AVGPOST=0.9799;RSQ=0.9699;ERATE=0.0008;THETA=0.0041;AC=939;AN=2184 GT:DS:GL:BD 0.42994505 0
1 25013827 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1101;AVGPOST=0.9979;RSQ=0.9921;ERATE=0.0004;THETA=0.0021;AC=240;AN=2184 GT:DS:GL:BD 0.10989011 0
1 25013838 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5589;ERATE=0.0003;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25013878 . CAA C 20 PASS INDEL;BAVGPOST=1.000;BRSQ=0.720;LDAF=0.0017;AVGPOST=0.9979;RSQ=0.4917;ERATE=0.0005;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25013905 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.967;LDAF=0.0404;AVGPOST=0.9976;RSQ=0.9768;ERATE=0.0007;THETA=0.0020;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 25013977 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1394;AVGPOST=0.9989;RSQ=0.9964;ERATE=0.0005;THETA=0.0083;AC=305;AN=2184 GT:DS:GL:BD 0.13965201 0
1 25014229 rs113617329 G GCCA 11669 PASS INDEL;BAVGPOST=0.972;BRSQ=0.887;LDAF=0.1308;AVGPOST=0.9868;RSQ=0.9587;ERATE=0.0010;THETA=0.0095;AC=293;AN=2184 GT:DS:GL:BD 0.13415751 0
1 25014243 . A AT 28 PASS INDEL;BAVGPOST=0.996;BRSQ=0.556;LDAF=0.0034;AVGPOST=0.9946;RSQ=0.3934;ERATE=0.0010;THETA=0.0022;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25014279 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4816;ERATE=0.0005;THETA=0.0082;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25014464 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0074;AVGPOST=0.9980;RSQ=0.8806;ERATE=0.0005;THETA=0.0011;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 25014468 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0689;AVGPOST=0.9983;RSQ=0.9891;ERATE=0.0004;THETA=0.0029;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 25014635 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.655;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6223;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25014637 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5543;ERATE=0.0004;THETA=0.0038;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25014645 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.744;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8031;ERATE=0.0003;THETA=0.0038;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25014660 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.1335;AVGPOST=0.9979;RSQ=0.9937;ERATE=0.0003;THETA=0.0062;AC=292;AN=2184 GT:DS:GL:BD 0.13369964 0
1 25014735 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6288;ERATE=0.0004;THETA=0.0059;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25014736 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5407;ERATE=0.0004;THETA=0.0037;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25014809 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1445;AVGPOST=0.9981;RSQ=0.9947;ERATE=0.0004;THETA=0.0250;AC=317;AN=2184 GT:DS:GL:BD 0.14514652 0
1 25014855 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9107;ERATE=0.0004;THETA=0.0173;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25014908 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8090;ERATE=0.0003;THETA=0.0061;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25015004 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0274;AVGPOST=0.9980;RSQ=0.9754;ERATE=0.0003;THETA=0.0055;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 25015114 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.976;LDAF=0.0689;AVGPOST=0.9963;RSQ=0.9774;ERATE=0.0008;THETA=0.0167;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 25015216 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4182;ERATE=0.0006;THETA=0.0268;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25015372 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0036;AVGPOST=0.9991;RSQ=0.9032;ERATE=0.0003;THETA=0.0310;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25015418 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.953;LDAF=0.6420;AVGPOST=0.9614;RSQ=0.9403;ERATE=0.0225;THETA=0.0259;AC=1404;AN=2184 GT:DS:GL:BD 0.64285713 1
1 25015514 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.966;LDAF=0.5779;AVGPOST=0.9739;RSQ=0.9612;ERATE=0.0028;THETA=0.0093;AC=1263;AN=2184 GT:DS:GL:BD 0.57829672 1
1 25015525 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5979;ERATE=0.0004;THETA=0.0068;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25015530 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.962;LDAF=0.6662;AVGPOST=0.9754;RSQ=0.9610;ERATE=0.0012;THETA=0.0044;AC=1459;AN=2184 GT:DS:GL:BD 0.66804028 1
1 25015536 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.979;LDAF=0.0176;AVGPOST=0.9987;RSQ=0.9736;ERATE=0.0003;THETA=0.0060;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 25015638 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.950;LDAF=0.3226;AVGPOST=0.9681;RSQ=0.9446;ERATE=0.0033;THETA=0.0006;AC=701;AN=2184 GT:DS:GL:BD 0.32097068 0
1 25015666 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0084;AVGPOST=0.9991;RSQ=0.9547;ERATE=0.0003;THETA=0.0012;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 25015704 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0062;AVGPOST=0.9995;RSQ=0.9617;ERATE=0.0003;THETA=0.0035;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 25015830 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25015923 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.958;LDAF=0.0585;AVGPOST=0.9941;RSQ=0.9662;ERATE=0.0004;THETA=0.0044;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 25016000 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.5243;ERATE=0.0004;THETA=0.0091;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25016132 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0069;AVGPOST=0.9979;RSQ=0.8607;ERATE=0.0004;THETA=0.0011;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 25016225 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5224;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25016345 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0092;AVGPOST=0.9971;RSQ=0.9016;ERATE=0.0004;THETA=0.0024;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 25016404 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.0030;AVGPOST=0.9988;RSQ=0.8252;ERATE=0.0004;THETA=0.0057;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25016435 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0037;AVGPOST=0.9961;RSQ=0.5952;ERATE=0.0005;THETA=0.0051;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25016481 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.0507;AVGPOST=0.9951;RSQ=0.9694;ERATE=0.0003;THETA=0.0047;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 25016557 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7318;ERATE=0.0004;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25016597 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.959;LDAF=0.0155;AVGPOST=0.9989;RSQ=0.9717;ERATE=0.0003;THETA=0.0011;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 25016620 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.3900;ERATE=0.0006;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25016660 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5592;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25016747 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.982;LDAF=0.0446;AVGPOST=0.9975;RSQ=0.9812;ERATE=0.0004;THETA=0.0069;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 25016798 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0070;AVGPOST=0.9985;RSQ=0.9339;ERATE=0.0004;THETA=0.0032;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 25016799 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0065;AVGPOST=0.9995;RSQ=0.9692;ERATE=0.0003;THETA=0.0050;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 25016860 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0025;AVGPOST=0.9983;RSQ=0.7292;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25016943 . C CA 742 PASS INDEL;BAVGPOST=0.986;BRSQ=0.703;LDAF=0.0275;AVGPOST=0.9753;RSQ=0.6312;ERATE=0.0060;THETA=0.0006;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 25016997 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0688;AVGPOST=0.9993;RSQ=0.9964;ERATE=0.0003;THETA=0.0020;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 25017022 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25017059 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.694;LDAF=0.0028;AVGPOST=0.9986;RSQ=0.7906;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25017192 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.566;LDAF=0.0056;AVGPOST=0.9945;RSQ=0.5914;ERATE=0.0006;THETA=0.0021;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25017203 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.979;LDAF=0.0699;AVGPOST=0.9944;RSQ=0.9709;ERATE=0.0012;THETA=0.0026;AC=151;AN=2184 GT:DS:GL:BD 0.06913920 0
1 25017266 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.703;LDAF=0.0235;AVGPOST=0.9862;RSQ=0.7498;ERATE=0.0008;THETA=0.0067;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 25017388 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.4291;AVGPOST=0.9924;RSQ=0.9877;ERATE=0.0006;THETA=0.0018;AC=938;AN=2184 GT:DS:GL:BD 0.42948717 0
1 25017552 . TC T 38 PASS INDEL;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5244;ERATE=0.0006;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25017562 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.6756;AVGPOST=0.9917;RSQ=0.9845;ERATE=0.0012;THETA=0.0004;AC=1477;AN=2184 GT:DS:GL:BD 0.67628205 1
1 25017626 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25017649 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.3640;AVGPOST=0.9964;RSQ=0.9943;ERATE=0.0003;THETA=0.0003;AC=795;AN=2184 GT:DS:GL:BD 0.36401099 0
1 25017658 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3008;AVGPOST=0.9957;RSQ=0.9928;ERATE=0.0005;THETA=0.0002;AC=657;AN=2184 GT:DS:GL:BD 0.30082417 0
1 25017661 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7121;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25017985 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.941;LDAF=0.0303;AVGPOST=0.9962;RSQ=0.9483;ERATE=0.0004;THETA=0.0004;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 25017988 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7652;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25018008 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0069;AVGPOST=0.9988;RSQ=0.9373;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 25018137 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.763;LDAF=0.0029;AVGPOST=0.9987;RSQ=0.8015;ERATE=0.0005;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25018151 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0691;AVGPOST=0.9998;RSQ=0.9986;ERATE=0.0003;THETA=0.0003;AC=151;AN=2184 GT:DS:GL:BD 0.06913920 0
1 25018361 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0159;AVGPOST=0.9992;RSQ=0.9765;ERATE=0.0003;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 25018394 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0164;AVGPOST=0.9983;RSQ=0.9572;ERATE=0.0003;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 25018503 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.0038;AVGPOST=0.9963;RSQ=0.6739;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25018629 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.749;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4237;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25018706 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9403;ERATE=0.0004;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25018923 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0536;AVGPOST=0.9997;RSQ=0.9976;ERATE=0.0003;THETA=0.0037;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 25018938 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0088;AVGPOST=0.9998;RSQ=0.9917;ERATE=0.0004;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 25019010 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6909;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25019051 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0072;AVGPOST=0.9991;RSQ=0.9559;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 25019052 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25019083 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0085;AVGPOST=0.9991;RSQ=0.9533;ERATE=0.0004;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 25019093 . T TAGAG 23182 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0685;AVGPOST=0.9988;RSQ=0.9939;ERATE=0.0004;THETA=0.0004;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 25019112 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0023;AVGPOST=0.9993;RSQ=0.8821;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25019278 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4835;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25019324 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8840;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25019505 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5979;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25019633 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0063;AVGPOST=0.9978;RSQ=0.8448;ERATE=0.0004;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 25019646 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5496;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25019740 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0078;AVGPOST=0.9957;RSQ=0.8117;ERATE=0.0004;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 25019821 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.985;LDAF=0.0691;AVGPOST=0.9992;RSQ=0.9954;ERATE=0.0004;THETA=0.0003;AC=151;AN=2184 GT:DS:GL:BD 0.06913920 0
1 25019834 . C CT 100 PASS INDEL;BAVGPOST=0.979;BRSQ=0.524;LDAF=0.0440;AVGPOST=0.9408;RSQ=0.4454;ERATE=0.0145;THETA=0.0008;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 25019845 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.606;LDAF=0.0063;AVGPOST=0.9913;RSQ=0.4460;ERATE=0.0028;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25019851 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.743;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.5966;ERATE=0.0007;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25019853 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.799;LDAF=0.0120;AVGPOST=0.9938;RSQ=0.7837;ERATE=0.0024;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 25019881 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.961;BRSQ=0.919;LDAF=0.2811;AVGPOST=0.9590;RSQ=0.9278;ERATE=0.0065;THETA=0.0008;AC=610;AN=2184 GT:DS:GL:BD 0.27930403 0
1 25019901 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.451;LDAF=0.0027;AVGPOST=0.9962;RSQ=0.4036;ERATE=0.0008;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25019924 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.871;LDAF=0.0100;AVGPOST=0.9927;RSQ=0.7127;ERATE=0.0013;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 25019947 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.984;LDAF=0.0710;AVGPOST=0.9961;RSQ=0.9803;ERATE=0.0008;THETA=0.0005;AC=153;AN=2184 GT:DS:GL:BD 0.07005495 0
1 25020069 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0021;AVGPOST=0.9989;RSQ=0.7677;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25020143 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.982;LDAF=0.0695;AVGPOST=0.9987;RSQ=0.9929;ERATE=0.0006;THETA=0.0003;AC=151;AN=2184 GT:DS:GL:BD 0.06913920 0
1 25020147 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0071;AVGPOST=0.9973;RSQ=0.8616;ERATE=0.0004;THETA=0.0009;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 25020417 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8901;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25020526 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9792;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25020533 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0108;AVGPOST=0.9982;RSQ=0.9336;ERATE=0.0008;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 25020586 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7519;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25020650 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0155;AVGPOST=1.0000;RSQ=0.9986;ERATE=0.0003;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 25020728 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7193;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25020731 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7597;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25020746 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6633;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25020850 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0095;AVGPOST=0.9982;RSQ=0.9250;ERATE=0.0003;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 25020898 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0170;AVGPOST=0.9997;RSQ=0.9909;ERATE=0.0004;THETA=0.0008;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 25020902 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0086;AVGPOST=0.9992;RSQ=0.9597;ERATE=0.0004;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 25020922 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5309;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25021037 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3789;AVGPOST=0.9993;RSQ=0.9987;ERATE=0.0005;THETA=0.0010;AC=828;AN=2184 GT:DS:GL:BD 0.37912089 0
1 25021056 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25021181 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3013;AVGPOST=0.9989;RSQ=0.9979;ERATE=0.0004;THETA=0.0002;AC=658;AN=2184 GT:DS:GL:BD 0.30128205 0
1 25021342 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0543;AVGPOST=0.9980;RSQ=0.9877;ERATE=0.0003;THETA=0.0003;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 25021368 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.774;LDAF=0.0020;AVGPOST=0.9978;RSQ=0.5764;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25021421 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0156;AVGPOST=0.9998;RSQ=0.9943;ERATE=0.0003;THETA=0.0006;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 25021462 . C CAA 31 PASS INDEL;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25021472 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3710;AVGPOST=0.9979;RSQ=0.9962;ERATE=0.0003;THETA=0.0005;AC=811;AN=2184 GT:DS:GL:BD 0.37133700 0
1 25021573 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.8486;AVGPOST=0.9963;RSQ=0.9879;ERATE=0.0006;THETA=0.0005;AC=1856;AN=2184 GT:DS:GL:BD 0.84981686 1
1 25021628 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.752;LDAF=0.0071;AVGPOST=0.9965;RSQ=0.8067;ERATE=0.0005;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 25021755 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0617;AVGPOST=0.9995;RSQ=0.9968;ERATE=0.0003;THETA=0.0004;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 25021842 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6765;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25021895 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9144;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25021976 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25021989 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25021990 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25022031 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0618;AVGPOST=0.9995;RSQ=0.9967;ERATE=0.0004;THETA=0.0004;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 25022055 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1259;AVGPOST=0.9980;RSQ=0.9921;ERATE=0.0004;THETA=0.0005;AC=276;AN=2184 GT:DS:GL:BD 0.12637363 0
1 25022071 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0159;AVGPOST=0.9993;RSQ=0.9785;ERATE=0.0004;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 25022092 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0156;AVGPOST=0.9999;RSQ=0.9957;ERATE=0.0003;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 25022106 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.5530;ERATE=0.0006;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25022265 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9520;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25022293 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.900;LDAF=0.9846;AVGPOST=0.9983;RSQ=0.9522;ERATE=0.0004;THETA=0.0015;AC=2151;AN=2184 GT:DS:GL:BD 0.98489010 1
1 25022314 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2416;AVGPOST=0.9978;RSQ=0.9952;ERATE=0.0003;THETA=0.0004;AC=526;AN=2184 GT:DS:GL:BD 0.24084249 0
1 25022443 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25022484 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0159;AVGPOST=0.9991;RSQ=0.9734;ERATE=0.0003;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 25022511 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0023;AVGPOST=0.9987;RSQ=0.7863;ERATE=0.0007;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25022592 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25022675 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5040;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25022677 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8859;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25022696 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7137;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25022781 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0155;AVGPOST=0.9999;RSQ=0.9971;ERATE=0.0003;THETA=0.0010;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 25022846 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.9211;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25022852 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0155;AVGPOST=0.9996;RSQ=0.9889;ERATE=0.0003;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 25022871 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3016;AVGPOST=0.9990;RSQ=0.9979;ERATE=0.0003;THETA=0.0003;AC=659;AN=2184 GT:DS:GL:BD 0.30173993 0
1 25022905 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0154;AVGPOST=0.9998;RSQ=0.9929;ERATE=0.0003;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 25022907 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0156;AVGPOST=0.9995;RSQ=0.9856;ERATE=0.0003;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 25022955 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9333;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25023044 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0156;AVGPOST=0.9998;RSQ=0.9943;ERATE=0.0003;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 25023059 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0031;AVGPOST=0.9991;RSQ=0.8641;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25023068 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25023072 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7052;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25023122 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25023130 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0158;AVGPOST=0.9995;RSQ=0.9847;ERATE=0.0004;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 25023136 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0023;AVGPOST=0.9985;RSQ=0.7458;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25023147 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7811;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25023226 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25023258 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25023271 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8178;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25023284 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6277;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25023368 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0206;AVGPOST=0.9993;RSQ=0.9854;ERATE=0.0004;THETA=0.0005;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 25023387 rs10595670 AGTT A 18013 PASS INDEL;BAVGPOST=0.984;BRSQ=0.959;LDAF=0.2402;AVGPOST=0.9883;RSQ=0.9748;ERATE=0.0028;THETA=0.0005;AC=522;AN=2184 GT:DS:GL:BD 0.23901099 0
1 25023430 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.782;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5662;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25023480 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5086;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25023483 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.877;LDAF=0.0155;AVGPOST=0.9996;RSQ=0.9886;ERATE=0.0004;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 25023507 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0156;AVGPOST=0.9994;RSQ=0.9815;ERATE=0.0003;THETA=0.0006;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 25023555 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.698;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5001;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25023569 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.6327;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25023579 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.690;LDAF=0.0147;AVGPOST=0.9847;RSQ=0.5785;ERATE=0.0036;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 25023616 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0027;AVGPOST=0.9989;RSQ=0.8117;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25023630 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2410;AVGPOST=0.9987;RSQ=0.9970;ERATE=0.0004;THETA=0.0004;AC=526;AN=2184 GT:DS:GL:BD 0.24084249 0
1 25023670 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0164;AVGPOST=0.9982;RSQ=0.9598;ERATE=0.0005;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 25023815 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.838;LDAF=0.0089;AVGPOST=0.9976;RSQ=0.9065;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 25023900 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.2882;AVGPOST=0.9984;RSQ=0.9969;ERATE=0.0005;THETA=0.0003;AC=629;AN=2184 GT:DS:GL:BD 0.28800365 0
1 25023923 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1237;AVGPOST=0.9982;RSQ=0.9924;ERATE=0.0005;THETA=0.0007;AC=270;AN=2184 GT:DS:GL:BD 0.12362637 0
1 25023927 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7931;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25023934 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.775;LDAF=0.0037;AVGPOST=0.9980;RSQ=0.8025;ERATE=0.0005;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25023940 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.717;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25023949 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0028;AVGPOST=0.9981;RSQ=0.7062;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25023964 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7117;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25024000 rs111519042 ATCT A 845 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25024017 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0130;AVGPOST=0.9977;RSQ=0.9310;ERATE=0.0004;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 25024040 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.897;LDAF=0.0190;AVGPOST=0.9977;RSQ=0.9523;ERATE=0.0004;THETA=0.0006;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 25024119 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0159;AVGPOST=0.9991;RSQ=0.9773;ERATE=0.0003;THETA=0.0002;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 25024146 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0025;AVGPOST=0.9988;RSQ=0.8054;ERATE=0.0005;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25024150 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0158;AVGPOST=0.9995;RSQ=0.9843;ERATE=0.0003;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 25024202 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.846;LDAF=0.0065;AVGPOST=0.9979;RSQ=0.8641;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 25024220 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.8482;AVGPOST=0.9948;RSQ=0.9855;ERATE=0.0008;THETA=0.0003;AC=1854;AN=2184 GT:DS:GL:BD 0.84890109 1
1 25024298 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5223;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25024389 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.728;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6144;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25024457 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0168;AVGPOST=0.9980;RSQ=0.9524;ERATE=0.0005;THETA=0.0005;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 25024499 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.4722;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25024683 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3649;AVGPOST=0.9970;RSQ=0.9948;ERATE=0.0005;THETA=0.0004;AC=798;AN=2184 GT:DS:GL:BD 0.36538461 0
1 25024832 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0506;AVGPOST=0.9989;RSQ=0.9918;ERATE=0.0004;THETA=0.0003;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 25024899 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0028;AVGPOST=0.9985;RSQ=0.7919;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25025033 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.660;LDAF=0.0015;AVGPOST=0.9977;RSQ=0.4455;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25025089 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0155;AVGPOST=0.9988;RSQ=0.9636;ERATE=0.0005;THETA=0.0011;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 25025229 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.971;LDAF=0.3761;AVGPOST=0.9899;RSQ=0.9823;ERATE=0.0014;THETA=0.0008;AC=827;AN=2184 GT:DS:GL:BD 0.37866300 0
1 25025290 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0162;AVGPOST=0.9984;RSQ=0.9512;ERATE=0.0007;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 25025448 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4575;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25025517 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7396;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25025547 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0635;AVGPOST=0.9996;RSQ=0.9975;ERATE=0.0003;THETA=0.0009;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 25025593 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25025594 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0636;AVGPOST=0.9993;RSQ=0.9951;ERATE=0.0004;THETA=0.0006;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 25025615 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8178;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25025729 . G GT 74 PASS INDEL;BAVGPOST=0.988;BRSQ=0.491;LDAF=0.0195;AVGPOST=0.9715;RSQ=0.4324;ERATE=0.0052;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 25025783 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0158;AVGPOST=0.9993;RSQ=0.9789;ERATE=0.0004;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 25025917 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0635;AVGPOST=0.9982;RSQ=0.9881;ERATE=0.0005;THETA=0.0005;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 25025991 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.987;LDAF=0.3024;AVGPOST=0.9954;RSQ=0.9919;ERATE=0.0004;THETA=0.0002;AC=660;AN=2184 GT:DS:GL:BD 0.30219781 0
1 25026283 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.951;LDAF=0.0078;AVGPOST=0.9991;RSQ=0.9597;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 25026376 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.713;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5817;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25026608 . A AC 570 PASS INDEL;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0134;AVGPOST=0.9919;RSQ=0.7519;ERATE=0.0011;THETA=0.0007;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 25026614 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.539;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25026659 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3660;AVGPOST=0.9925;RSQ=0.9871;ERATE=0.0008;THETA=0.0005;AC=800;AN=2184 GT:DS:GL:BD 0.36630037 0
1 25026684 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0176;AVGPOST=0.9973;RSQ=0.9305;ERATE=0.0007;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 25026820 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.926;LDAF=0.0086;AVGPOST=0.9953;RSQ=0.8055;ERATE=0.0006;THETA=0.0007;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 25026845 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4583;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25027047 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0027;AVGPOST=0.9995;RSQ=0.9255;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25027074 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25027216 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25027222 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25027349 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.4949;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25027416 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8923;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25027609 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.849;LDAF=0.0308;AVGPOST=0.9957;RSQ=0.9435;ERATE=0.0007;THETA=0.0049;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 25027745 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.773;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4468;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25027803 . A AC 5999 PASS INDEL;BAVGPOST=0.912;BRSQ=0.861;LDAF=0.6183;AVGPOST=0.9618;RSQ=0.9400;ERATE=0.0014;THETA=0.0003;AC=1363;AN=2184 GT:DS:GL:BD 0.62408423 1
1 25027806 rs35998083 C CT 35020 PASS INDEL;BAVGPOST=0.912;BRSQ=0.861;LDAF=0.6213;AVGPOST=0.9497;RSQ=0.9215;ERATE=0.0032;THETA=0.0014;AC=1375;AN=2184 GT:DS:GL:BD 0.62957877 1
1 25027846 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.757;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4624;ERATE=0.0005;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25027857 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.785;LDAF=0.0164;AVGPOST=0.9946;RSQ=0.8588;ERATE=0.0015;THETA=0.0019;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 25027878 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.663;LDAF=0.0017;AVGPOST=0.9973;RSQ=0.3411;ERATE=0.0008;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25027924 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.676;LDAF=0.0021;AVGPOST=0.9967;RSQ=0.3942;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25027927 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0094;AVGPOST=0.9976;RSQ=0.9017;ERATE=0.0004;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 25028011 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5316;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25028059 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0156;AVGPOST=0.9998;RSQ=0.9944;ERATE=0.0003;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 25028314 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0050;AVGPOST=0.9983;RSQ=0.8619;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25028332 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.742;LDAF=0.0026;AVGPOST=0.9988;RSQ=0.7968;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25028459 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.734;LDAF=0.0052;AVGPOST=0.9969;RSQ=0.7760;ERATE=0.0004;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25028475 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0064;AVGPOST=0.9990;RSQ=0.9348;ERATE=0.0004;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 25028481 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.0037;AVGPOST=0.9984;RSQ=0.8228;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25028508 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=0.9989;RSQ=0.9042;ERATE=0.0003;THETA=0.0025;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25028535 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6723;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25028635 . A AT 318 PASS INDEL;BAVGPOST=0.978;BRSQ=0.578;LDAF=0.0432;AVGPOST=0.9517;RSQ=0.5347;ERATE=0.0128;THETA=0.0003;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 25028677 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0029;AVGPOST=0.9986;RSQ=0.8193;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25028696 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.629;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4635;ERATE=0.0006;THETA=0.0041;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25028697 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0020;AVGPOST=0.9970;RSQ=0.4315;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25028777 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.770;LDAF=0.0042;AVGPOST=0.9974;RSQ=0.7557;ERATE=0.0004;THETA=0.0026;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25029006 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25029118 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.6633;AVGPOST=0.9946;RSQ=0.9901;ERATE=0.0011;THETA=0.0004;AC=1451;AN=2184 GT:DS:GL:BD 0.66437727 1
1 25029155 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0178;AVGPOST=0.9992;RSQ=0.9861;ERATE=0.0003;THETA=0.0007;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 25029314 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5073;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25029457 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0046;AVGPOST=0.9997;RSQ=0.9720;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25029488 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2888;AVGPOST=0.9992;RSQ=0.9983;ERATE=0.0004;THETA=0.0006;AC=631;AN=2184 GT:DS:GL:BD 0.28891942 0
1 25029759 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25029817 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25029845 . CCATT C 2403 PASS INDEL;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0143;AVGPOST=0.9975;RSQ=0.9410;ERATE=0.0004;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 25029897 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.769;LDAF=0.0023;AVGPOST=0.9981;RSQ=0.6625;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25029964 . GT G 789 PASS INDEL;BAVGPOST=0.967;BRSQ=0.606;LDAF=0.0646;AVGPOST=0.9362;RSQ=0.5934;ERATE=0.0113;THETA=0.0004;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 25029974 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2841;AVGPOST=0.9955;RSQ=0.9913;ERATE=0.0012;THETA=0.0005;AC=620;AN=2184 GT:DS:GL:BD 0.28388280 0
1 25030129 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.976;LDAF=0.6241;AVGPOST=0.9498;RSQ=0.9188;ERATE=0.0085;THETA=0.0013;AC=1376;AN=2184 GT:DS:GL:BD 0.63003665 1
1 25030174 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.715;LDAF=0.0049;AVGPOST=0.9964;RSQ=0.7259;ERATE=0.0005;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25030224 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.598;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7342;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25030250 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.8537;AVGPOST=0.9929;RSQ=0.9803;ERATE=0.0004;THETA=0.0004;AC=1867;AN=2184 GT:DS:GL:BD 0.85485345 1
1 25030305 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.552;LDAF=0.0049;AVGPOST=0.9945;RSQ=0.5296;ERATE=0.0006;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25030345 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.564;LDAF=0.0049;AVGPOST=0.9920;RSQ=0.3547;ERATE=0.0009;THETA=0.0052;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25030399 . C CA 389 PASS INDEL;BAVGPOST=0.933;BRSQ=0.452;LDAF=0.1170;AVGPOST=0.8589;RSQ=0.4263;ERATE=0.0332;THETA=0.0004;AC=131;AN=2184 GT:DS:GL:BD 0.05998169 0
1 25030470 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.976;LDAF=0.3352;AVGPOST=0.9807;RSQ=0.9657;ERATE=0.0040;THETA=0.0012;AC=732;AN=2184 GT:DS:GL:BD 0.33516484 0
1 25030792 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.654;LDAF=0.0060;AVGPOST=0.9933;RSQ=0.5549;ERATE=0.0006;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25030904 . AAAAG A 98 PASS INDEL;BAVGPOST=1.000;BRSQ=0.693;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6061;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25030914 . G GA 2100 PASS INDEL;BAVGPOST=0.987;BRSQ=0.854;LDAF=0.0513;AVGPOST=0.9726;RSQ=0.7698;ERATE=0.0074;THETA=0.0004;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 25030933 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7548;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25031069 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9351;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25031286 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.844;LDAF=0.0032;AVGPOST=0.9980;RSQ=0.7520;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25031429 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.741;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5981;ERATE=0.0003;THETA=0.0034;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25031442 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7226;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25031587 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.714;LDAF=0.0087;AVGPOST=0.9947;RSQ=0.7593;ERATE=0.0005;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 25031636 . AG A 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.6820;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25032043 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6406;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25032168 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3355;AVGPOST=0.9978;RSQ=0.9959;ERATE=0.0005;THETA=0.0009;AC=732;AN=2184 GT:DS:GL:BD 0.33516484 0
1 25032195 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0065;AVGPOST=0.9996;RSQ=0.9731;ERATE=0.0003;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 25032304 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9545;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25032342 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9466;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25032347 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6088;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25032432 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25032504 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8309;ERATE=0.0007;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25032549 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5467;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25032605 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7112;AVGPOST=0.9971;RSQ=0.9937;ERATE=0.0005;THETA=0.0008;AC=1555;AN=2184 GT:DS:GL:BD 0.71199632 1
1 25032627 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5969;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25032875 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.965;LDAF=0.2991;AVGPOST=0.9884;RSQ=0.9796;ERATE=0.0008;THETA=0.0003;AC=659;AN=2184 GT:DS:GL:BD 0.30173993 0
1 25032927 . G GA 195 PASS INDEL;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5736;ERATE=0.0006;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25032948 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6746;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25033083 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25033092 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6915;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25033405 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.758;LDAF=0.0054;AVGPOST=0.9966;RSQ=0.7447;ERATE=0.0006;THETA=0.0011;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25033436 . A AT 140 PASS INDEL;BAVGPOST=0.994;BRSQ=0.608;LDAF=0.0124;AVGPOST=0.9852;RSQ=0.5351;ERATE=0.0043;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 25033462 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.862;LDAF=0.0034;AVGPOST=0.9988;RSQ=0.8691;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25033501 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25033603 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.809;LDAF=0.0043;AVGPOST=0.9974;RSQ=0.7420;ERATE=0.0007;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25033654 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0028;AVGPOST=0.9997;RSQ=0.9538;ERATE=0.0003;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25033949 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.601;LDAF=0.0032;AVGPOST=0.9971;RSQ=0.5931;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25034045 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0256;AVGPOST=0.9989;RSQ=0.9835;ERATE=0.0004;THETA=0.0010;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 25034110 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0029;AVGPOST=0.9998;RSQ=0.9626;ERATE=0.0003;THETA=0.0015;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25034126 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0153;AVGPOST=0.9994;RSQ=0.9826;ERATE=0.0004;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 25034273 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25034305 . T TG 211 PASS INDEL;BAVGPOST=0.769;BRSQ=0.127;LDAF=0.1972;AVGPOST=0.7502;RSQ=0.3892;ERATE=0.0118;THETA=0.0008;AC=291;AN=2184 GT:DS:GL:BD 0.13324176 0
1 25034306 . GTGTGT G 2676 PASS INDEL;BAVGPOST=0.587;BRSQ=0.336;LDAF=0.4516;AVGPOST=0.6817;RSQ=0.4737;ERATE=0.0257;THETA=0.0005;AC=982;AN=2184 GT:DS:GL:BD 0.44963369 0
1 25034308 . GTGT G 1035 PASS INDEL;BAVGPOST=0.570;BRSQ=0.292;LDAF=0.4811;AVGPOST=0.6733;RSQ=0.4626;ERATE=0.0239;THETA=0.0006;AC=1035;AN=2184 GT:DS:GL:BD 0.47390109 0
1 25034311 . T TG 178 PASS INDEL;BAVGPOST=0.475;BRSQ=0.033;LDAF=0.3188;AVGPOST=0.7428;RSQ=0.4986;ERATE=0.0104;THETA=0.0021;AC=596;AN=2184 GT:DS:GL:BD 0.27289379 0
1 25034532 . C CA 65 PASS INDEL;BAVGPOST=1.000;BRSQ=0.729;LDAF=0.0031;AVGPOST=0.9959;RSQ=0.4730;ERATE=0.0008;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25034572 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0050;AVGPOST=0.9963;RSQ=0.7057;ERATE=0.0005;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25034754 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.758;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6061;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25034783 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.4938;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25034809 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25034827 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6043;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25035022 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.775;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.3927;ERATE=0.0008;THETA=0.0041;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25035246 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.663;LDAF=0.0141;AVGPOST=0.9862;RSQ=0.6329;ERATE=0.0018;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 25035277 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.532;LDAF=0.0021;AVGPOST=0.9981;RSQ=0.6140;ERATE=0.0007;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25035314 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0091;AVGPOST=0.9982;RSQ=0.9139;ERATE=0.0004;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 25035348 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.978;LDAF=0.0367;AVGPOST=0.9970;RSQ=0.9624;ERATE=0.0005;THETA=0.0005;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 25035362 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.783;LDAF=0.0146;AVGPOST=0.9917;RSQ=0.7696;ERATE=0.0017;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 25035363 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.936;LDAF=0.0160;AVGPOST=0.9977;RSQ=0.9430;ERATE=0.0003;THETA=0.0005;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 25035415 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6818;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25035446 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.932;LDAF=0.0233;AVGPOST=0.9989;RSQ=0.9788;ERATE=0.0005;THETA=0.0008;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 25035534 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0257;AVGPOST=0.9997;RSQ=0.9944;ERATE=0.0003;THETA=0.0004;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 25035614 . C CT 28 PASS INDEL;BAVGPOST=1.000;BRSQ=0.678;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.5148;ERATE=0.0004;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25035681 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6650;AVGPOST=0.9941;RSQ=0.9885;ERATE=0.0006;THETA=0.0004;AC=1453;AN=2184 GT:DS:GL:BD 0.66529304 1
1 25035717 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.649;LDAF=0.0026;AVGPOST=0.9971;RSQ=0.5564;ERATE=0.0005;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25035867 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.491;LDAF=0.0247;AVGPOST=0.9860;RSQ=0.8024;ERATE=0.0011;THETA=0.0005;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 25035875 . TAC T 2654 PASS INDEL;BAVGPOST=0.617;BRSQ=0.331;LDAF=0.5565;AVGPOST=0.6533;RSQ=0.4211;ERATE=0.0347;THETA=0.0004;AC=1266;AN=2184 GT:DS:GL:BD 0.57967031 1
1 25035877 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.915;BRSQ=0.773;LDAF=0.7541;AVGPOST=0.8440;RSQ=0.6601;ERATE=0.0119;THETA=0.0003;AC=1704;AN=2184 GT:DS:GL:BD 0.78021979 1
1 25035967 . G GCCT 2337 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0350;AVGPOST=0.9896;RSQ=0.8814;ERATE=0.0011;THETA=0.0005;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 25035976 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.588;LDAF=0.0139;AVGPOST=0.9745;RSQ=0.3000;ERATE=0.0021;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25036069 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0065;AVGPOST=0.9971;RSQ=0.8442;ERATE=0.0005;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 25036172 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.776;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4425;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25036295 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6237;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25036296 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25036447 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.614;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6365;ERATE=0.0003;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25036617 . TTTTTC T 96 PASS INDEL;BAVGPOST=0.999;BRSQ=0.567;LDAF=0.0019;AVGPOST=0.9975;RSQ=0.4564;ERATE=0.0007;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25036678 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.773;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.4115;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25036687 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5854;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25036834 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0183;AVGPOST=0.9995;RSQ=0.9868;ERATE=0.0003;THETA=0.0005;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 25036910 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6943;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25036999 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0156;AVGPOST=0.9989;RSQ=0.9702;ERATE=0.0004;THETA=0.0007;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 25037108 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.968;LDAF=0.0282;AVGPOST=0.9980;RSQ=0.9718;ERATE=0.0004;THETA=0.0004;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 25037161 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.408;LDAF=0.0024;AVGPOST=0.9973;RSQ=0.5299;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25037179 . A AT 697 PASS INDEL;BAVGPOST=0.923;BRSQ=0.445;LDAF=0.1208;AVGPOST=0.8548;RSQ=0.4258;ERATE=0.0342;THETA=0.0005;AC=136;AN=2184 GT:DS:GL:BD 0.06227106 0
1 25037244 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0050;AVGPOST=0.9958;RSQ=0.7029;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25037395 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.893;LDAF=0.0095;AVGPOST=0.9958;RSQ=0.8549;ERATE=0.0005;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 25037528 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.574;LDAF=0.0062;AVGPOST=0.9911;RSQ=0.4317;ERATE=0.0011;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25037719 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.489;LDAF=0.0023;AVGPOST=0.9983;RSQ=0.6622;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25037912 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8446;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25037924 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25037961 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0135;AVGPOST=0.9987;RSQ=0.9572;ERATE=0.0003;THETA=0.0007;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 25037990 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25038205 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7089;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25038225 rs113082299 CAGAG C 792 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=0.9975;RSQ=0.7689;ERATE=0.0005;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25038293 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8330;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25038445 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.514;LDAF=0.0027;AVGPOST=0.9971;RSQ=0.5270;ERATE=0.0006;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25038491 . CTG C 61 PASS INDEL;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0042;AVGPOST=0.9971;RSQ=0.7522;ERATE=0.0004;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25038601 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4851;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25038708 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.638;LDAF=0.0035;AVGPOST=0.9968;RSQ=0.6317;ERATE=0.0007;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25039101 . A AT 37 PASS INDEL;BAVGPOST=0.995;BRSQ=0.567;LDAF=0.0059;AVGPOST=0.9947;RSQ=0.6571;ERATE=0.0010;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25039304 . CAGAG C 3127 PASS INDEL;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0189;AVGPOST=0.9984;RSQ=0.9656;ERATE=0.0004;THETA=0.0005;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 25039385 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9438;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25039388 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0056;AVGPOST=0.9996;RSQ=0.9659;ERATE=0.0003;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 25039504 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5467;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25039665 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25039867 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0261;AVGPOST=0.9994;RSQ=0.9893;ERATE=0.0004;THETA=0.0010;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 25039978 rs5773098 CAGA C 5421 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0256;AVGPOST=0.9995;RSQ=0.9921;ERATE=0.0003;THETA=0.0007;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 25040071 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.765;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8312;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25040080 . G GC 24 PASS INDEL;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25040158 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25040302 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.824;LDAF=0.0122;AVGPOST=0.9979;RSQ=0.9207;ERATE=0.0005;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 25040315 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.3415;AVGPOST=0.9958;RSQ=0.9928;ERATE=0.0005;THETA=0.0002;AC=742;AN=2184 GT:DS:GL:BD 0.33974358 0
1 25040331 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.2912;AVGPOST=0.9952;RSQ=0.9917;ERATE=0.0004;THETA=0.0006;AC=638;AN=2184 GT:DS:GL:BD 0.29212454 0
1 25040336 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25040383 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6636;AVGPOST=0.9962;RSQ=0.9929;ERATE=0.0009;THETA=0.0005;AC=1449;AN=2184 GT:DS:GL:BD 0.66346157 1
1 25040430 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25040443 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25040452 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6660;AVGPOST=0.9951;RSQ=0.9912;ERATE=0.0013;THETA=0.0003;AC=1456;AN=2184 GT:DS:GL:BD 0.66666669 1
1 25040473 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25040554 . AG A 274 PASS INDEL;BAVGPOST=0.999;BRSQ=0.799;LDAF=0.0043;AVGPOST=0.9978;RSQ=0.8063;ERATE=0.0005;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25040560 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0230;AVGPOST=0.9997;RSQ=0.9939;ERATE=0.0003;THETA=0.0014;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 25040562 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.738;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8693;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25040567 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6586;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25040571 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8330;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25040597 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6397;AVGPOST=0.9947;RSQ=0.9911;ERATE=0.0022;THETA=0.0005;AC=1397;AN=2184 GT:DS:GL:BD 0.63965201 1
1 25040619 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0176;AVGPOST=0.9983;RSQ=0.9597;ERATE=0.0003;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 25040634 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9373;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25040746 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.6162;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25040768 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7721;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25040774 rs113620079 CA C 4884 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0231;AVGPOST=0.9994;RSQ=0.9887;ERATE=0.0004;THETA=0.0005;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 25040787 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0042;AVGPOST=0.9985;RSQ=0.8825;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25040791 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0230;AVGPOST=0.9996;RSQ=0.9939;ERATE=0.0003;THETA=0.0005;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 25040845 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25040856 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25040965 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25041004 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.9114;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25041024 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25041086 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9553;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25041205 rs113313275 A AT 247 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0047;AVGPOST=0.9988;RSQ=0.8801;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25041241 . G GC 162 PASS INDEL;BAVGPOST=0.999;BRSQ=0.732;LDAF=0.0013;AVGPOST=0.9994;RSQ=0.7248;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25041418 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6939;AVGPOST=0.9979;RSQ=0.9953;ERATE=0.0007;THETA=0.0007;AC=1516;AN=2184 GT:DS:GL:BD 0.69413918 1
1 25041496 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9473;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25042075 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25042339 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8511;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25042408 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.6665;AVGPOST=0.9982;RSQ=0.9967;ERATE=0.0004;THETA=0.0006;AC=1456;AN=2184 GT:DS:GL:BD 0.66666669 1
1 25042482 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6647;AVGPOST=0.9957;RSQ=0.9917;ERATE=0.0011;THETA=0.0006;AC=1453;AN=2184 GT:DS:GL:BD 0.66529304 1
1 25042575 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7758;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25042593 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9341;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25042672 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0024;AVGPOST=0.9975;RSQ=0.5739;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25042682 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0017;AVGPOST=0.9977;RSQ=0.4427;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25042705 . AAAAT A 302 PASS INDEL;BAVGPOST=0.998;BRSQ=0.754;LDAF=0.0086;AVGPOST=0.9913;RSQ=0.5859;ERATE=0.0018;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 25042750 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25042840 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.699;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7259;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25042876 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25042902 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.9099;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25042903 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.959;LDAF=0.0135;AVGPOST=0.9980;RSQ=0.9418;ERATE=0.0003;THETA=0.0026;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 25042964 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25042995 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9302;ERATE=0.0003;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25043035 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9545;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25043118 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7148;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25043293 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.980;LDAF=0.3338;AVGPOST=0.9940;RSQ=0.9892;ERATE=0.0005;THETA=0.0004;AC=730;AN=2184 GT:DS:GL:BD 0.33424908 0
1 25043294 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4862;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25043333 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.637;LDAF=0.0031;AVGPOST=0.9974;RSQ=0.6435;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25043383 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6065;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25043458 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0004;AVGPOST=0.9998;RSQ=0.7557;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25043538 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8303;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25043557 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25043590 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0167;AVGPOST=0.9993;RSQ=0.9861;ERATE=0.0003;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 25043745 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25043753 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9806;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 25043780 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6651;AVGPOST=0.9995;RSQ=0.9990;ERATE=0.0004;THETA=0.0005;AC=1452;AN=2184 GT:DS:GL:BD 0.66483516 1
1 25043860 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5980;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25043881 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6649;AVGPOST=0.9991;RSQ=0.9982;ERATE=0.0004;THETA=0.0005;AC=1452;AN=2184 GT:DS:GL:BD 0.66483516 1
1 25044010 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6937;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25044012 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8344;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25044020 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9553;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25044038 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8473;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25044047 . GC G 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4953;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25044070 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6229;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25044111 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3615;AVGPOST=0.9977;RSQ=0.9961;ERATE=0.0003;THETA=0.0002;AC=789;AN=2184 GT:DS:GL:BD 0.36126372 0
1 25044112 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0019;AVGPOST=0.9993;RSQ=0.8470;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25044235 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9358;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25044281 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0003;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25044329 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25044342 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0038;AVGPOST=0.9988;RSQ=0.8634;ERATE=0.0008;THETA=0.0021;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25044430 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25044456 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.7116;AVGPOST=0.9978;RSQ=0.9959;ERATE=0.0007;THETA=0.0005;AC=1554;AN=2184 GT:DS:GL:BD 0.71153843 1
1 25044526 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6643;AVGPOST=0.9991;RSQ=0.9981;ERATE=0.0003;THETA=0.0003;AC=1451;AN=2184 GT:DS:GL:BD 0.66437727 1
1 25044621 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25044638 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6169;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25044726 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0357;AVGPOST=0.9984;RSQ=0.9842;ERATE=0.0003;THETA=0.0007;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 25044752 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6567;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25044799 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6904;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25044918 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25044922 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6405;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25044975 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25044982 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25045011 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25045064 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8057;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25045091 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4807;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25045113 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9473;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25045126 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25045172 . T TC 481 PASS INDEL;BAVGPOST=0.998;BRSQ=0.756;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.8744;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25045189 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.923;LDAF=0.0171;AVGPOST=0.9966;RSQ=0.9176;ERATE=0.0007;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 25045293 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9403;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25045471 . C CT 1189 PASS INDEL;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0104;AVGPOST=0.9974;RSQ=0.9004;ERATE=0.0004;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 25045512 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9987;RSQ=0.8745;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25045575 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9401;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25045596 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.650;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6007;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25045647 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25045680 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8893;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25045733 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6649;AVGPOST=0.9968;RSQ=0.9949;ERATE=0.0005;THETA=0.0005;AC=1451;AN=2184 GT:DS:GL:BD 0.66437727 1
1 25045734 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9253;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25045793 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7324;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25045865 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6621;AVGPOST=0.9990;RSQ=0.9982;ERATE=0.0003;THETA=0.0005;AC=1445;AN=2184 GT:DS:GL:BD 0.66163003 1
1 25045883 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6619;AVGPOST=0.9987;RSQ=0.9974;ERATE=0.0005;THETA=0.0004;AC=1445;AN=2184 GT:DS:GL:BD 0.66163003 1
1 25045906 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.848;LDAF=0.0057;AVGPOST=0.9956;RSQ=0.6915;ERATE=0.0006;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25045909 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.852;LDAF=0.0047;AVGPOST=0.9972;RSQ=0.7593;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25045989 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8316;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25046031 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0036;AVGPOST=0.9989;RSQ=0.8844;ERATE=0.0003;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25046126 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.976;LDAF=0.6601;AVGPOST=0.9915;RSQ=0.9857;ERATE=0.0010;THETA=0.0004;AC=1445;AN=2184 GT:DS:GL:BD 0.66163003 1
1 25046132 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0061;AVGPOST=0.9982;RSQ=0.8602;ERATE=0.0006;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 25046258 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.978;LDAF=0.6489;AVGPOST=0.9664;RSQ=0.9426;ERATE=0.0038;THETA=0.0006;AC=1435;AN=2184 GT:DS:GL:BD 0.65705127 1
1 25046304 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.397;LDAF=0.0058;AVGPOST=0.9936;RSQ=0.5443;ERATE=0.0006;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25046473 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0027;AVGPOST=0.9999;RSQ=0.9768;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25046585 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.508;LDAF=0.0177;AVGPOST=0.9791;RSQ=0.5280;ERATE=0.0074;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 25046623 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0235;AVGPOST=0.9973;RSQ=0.9560;ERATE=0.0005;THETA=0.0005;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 25046644 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.657;LDAF=0.0020;AVGPOST=0.9973;RSQ=0.3942;ERATE=0.0009;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25046687 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.924;LDAF=0.0208;AVGPOST=0.9971;RSQ=0.9383;ERATE=0.0004;THETA=0.0005;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 25046798 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.834;LDAF=0.0025;AVGPOST=0.9991;RSQ=0.8437;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25046811 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.831;LDAF=0.0050;AVGPOST=0.9991;RSQ=0.9180;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25046829 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.831;LDAF=0.0229;AVGPOST=0.9909;RSQ=0.8447;ERATE=0.0011;THETA=0.0006;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 25046938 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0004;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25047140 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0022;AVGPOST=0.9978;RSQ=0.6108;ERATE=0.0005;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25047175 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.984;LDAF=0.6589;AVGPOST=0.9896;RSQ=0.9831;ERATE=0.0012;THETA=0.0003;AC=1439;AN=2184 GT:DS:GL:BD 0.65888280 1
1 25047208 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6629;AVGPOST=0.9972;RSQ=0.9952;ERATE=0.0004;THETA=0.0005;AC=1448;AN=2184 GT:DS:GL:BD 0.66300368 1
1 25047459 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3608;AVGPOST=0.9978;RSQ=0.9961;ERATE=0.0004;THETA=0.0004;AC=788;AN=2184 GT:DS:GL:BD 0.36080587 0
1 25047569 . C CT 21 PASS INDEL;BAVGPOST=0.992;BRSQ=0.502;LDAF=0.0134;AVGPOST=0.9867;RSQ=0.6000;ERATE=0.0027;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 25047621 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.983;LDAF=0.2991;AVGPOST=0.9947;RSQ=0.9901;ERATE=0.0007;THETA=0.0008;AC=653;AN=2184 GT:DS:GL:BD 0.29899266 0
1 25047622 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0067;AVGPOST=0.9983;RSQ=0.9047;ERATE=0.0005;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 25047661 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.674;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4487;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25047748 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.2995;AVGPOST=0.9931;RSQ=0.9874;ERATE=0.0005;THETA=0.0003;AC=655;AN=2184 GT:DS:GL:BD 0.29990843 0
1 25047763 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.559;LDAF=0.0027;AVGPOST=0.9967;RSQ=0.4888;ERATE=0.0006;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25047972 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0284;AVGPOST=0.9964;RSQ=0.9498;ERATE=0.0007;THETA=0.0004;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 25048037 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.965;BRSQ=0.931;LDAF=0.6433;AVGPOST=0.9458;RSQ=0.9106;ERATE=0.0052;THETA=0.0004;AC=1425;AN=2184 GT:DS:GL:BD 0.65247256 1
1 25048045 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.446;LDAF=0.0172;AVGPOST=0.9803;RSQ=0.5403;ERATE=0.0011;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 25048046 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.961;BRSQ=0.925;LDAF=0.6558;AVGPOST=0.9861;RSQ=0.9754;ERATE=0.0012;THETA=0.0004;AC=1439;AN=2184 GT:DS:GL:BD 0.65888280 1
1 25048073 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.446;LDAF=0.0186;AVGPOST=0.9721;RSQ=0.3871;ERATE=0.0014;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 25048099 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.943;BRSQ=0.885;LDAF=0.6275;AVGPOST=0.9029;RSQ=0.8349;ERATE=0.0084;THETA=0.0010;AC=1417;AN=2184 GT:DS:GL:BD 0.64880955 1
1 25048139 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.946;LDAF=0.6964;AVGPOST=0.9482;RSQ=0.9013;ERATE=0.0063;THETA=0.0004;AC=1539;AN=2184 GT:DS:GL:BD 0.70467031 1
1 25048212 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.6599;AVGPOST=0.9594;RSQ=0.9328;ERATE=0.0035;THETA=0.0006;AC=1452;AN=2184 GT:DS:GL:BD 0.66483516 1
1 25048216 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.560;LDAF=0.0058;AVGPOST=0.9903;RSQ=0.3182;ERATE=0.0011;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25048368 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.595;LDAF=0.0069;AVGPOST=0.9959;RSQ=0.7730;ERATE=0.0005;THETA=0.0009;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 25048375 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.663;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.3867;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25048544 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.8958;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25048767 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5429;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25048847 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0029;AVGPOST=0.9998;RSQ=0.9618;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25048861 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0301;AVGPOST=0.9983;RSQ=0.9789;ERATE=0.0003;THETA=0.0008;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 25048932 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0015;AVGPOST=0.9983;RSQ=0.5365;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25049012 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5426;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25049042 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0019;AVGPOST=0.9971;RSQ=0.3487;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25049159 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.6055;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25049236 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.481;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6211;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25049389 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.693;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8474;ERATE=0.0004;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25049466 . GGTCA G 5207 PASS INDEL;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0300;AVGPOST=0.9981;RSQ=0.9784;ERATE=0.0003;THETA=0.0003;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 25049488 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.644;LDAF=0.0034;AVGPOST=0.9978;RSQ=0.7291;ERATE=0.0004;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25049501 . TC T 2383 PASS INDEL;BAVGPOST=0.998;BRSQ=0.982;LDAF=0.0291;AVGPOST=0.9982;RSQ=0.9732;ERATE=0.0004;THETA=0.0022;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 25049575 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7756;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25049579 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25049688 . TTA T 24199 PASS INDEL;BAVGPOST=0.933;BRSQ=0.883;LDAF=0.6141;AVGPOST=0.9217;RSQ=0.8786;ERATE=0.0085;THETA=0.0005;AC=1392;AN=2184 GT:DS:GL:BD 0.63736266 1
1 25049689 rs35773801 TA T 28034 PASS INDEL;BAVGPOST=0.947;BRSQ=0.907;LDAF=0.6373;AVGPOST=0.9533;RSQ=0.9253;ERATE=0.0053;THETA=0.0004;AC=1413;AN=2184 GT:DS:GL:BD 0.64697802 1
1 25049693 . T TA 89 PASS INDEL;BAVGPOST=0.998;BRSQ=0.637;LDAF=0.0048;AVGPOST=0.9955;RSQ=0.6380;ERATE=0.0006;THETA=0.0016;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25049709 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.889;LDAF=0.0073;AVGPOST=0.9979;RSQ=0.8745;ERATE=0.0005;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 25049854 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0016;AVGPOST=0.9976;RSQ=0.3761;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25049929 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6195;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25049949 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.972;LDAF=0.3282;AVGPOST=0.9870;RSQ=0.9778;ERATE=0.0030;THETA=0.0004;AC=722;AN=2184 GT:DS:GL:BD 0.33058608 0
1 25050030 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.875;LDAF=0.0306;AVGPOST=0.9933;RSQ=0.9129;ERATE=0.0004;THETA=0.0004;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 25050091 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.6600;AVGPOST=0.9978;RSQ=0.9958;ERATE=0.0006;THETA=0.0005;AC=1442;AN=2184 GT:DS:GL:BD 0.66025639 1
1 25050147 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0188;AVGPOST=0.9936;RSQ=0.8660;ERATE=0.0004;THETA=0.0005;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 25050228 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.979;LDAF=0.3341;AVGPOST=0.9964;RSQ=0.9932;ERATE=0.0008;THETA=0.0003;AC=729;AN=2184 GT:DS:GL:BD 0.33379120 0
1 25050293 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.676;LDAF=0.0049;AVGPOST=0.9969;RSQ=0.7513;ERATE=0.0004;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25050319 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9809;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25050338 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0005;AVGPOST=0.9990;RSQ=0.3053;ERATE=0.0004;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 25050376 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.792;LDAF=0.0030;AVGPOST=0.9992;RSQ=0.8712;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25050452 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.650;LDAF=0.0031;AVGPOST=0.9956;RSQ=0.3488;ERATE=0.0008;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25050476 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9988;RSQ=0.8518;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25050508 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.945;LDAF=0.0750;AVGPOST=0.9891;RSQ=0.9387;ERATE=0.0005;THETA=0.0006;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 25050549 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.3525;AVGPOST=0.9962;RSQ=0.9936;ERATE=0.0006;THETA=0.0004;AC=769;AN=2184 GT:DS:GL:BD 0.35210621 0
1 25050829 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3367;AVGPOST=0.9963;RSQ=0.9948;ERATE=0.0003;THETA=0.0004;AC=733;AN=2184 GT:DS:GL:BD 0.33562270 0
1 25050835 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0026;AVGPOST=0.9980;RSQ=0.6572;ERATE=0.0006;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25050882 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0184;AVGPOST=0.9980;RSQ=0.9654;ERATE=0.0004;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 25050953 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.674;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7373;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25051087 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5046;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25051102 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.967;BRSQ=0.938;LDAF=0.2851;AVGPOST=0.9888;RSQ=0.9794;ERATE=0.0006;THETA=0.0003;AC=620;AN=2184 GT:DS:GL:BD 0.28388280 0
1 25051106 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0039;AVGPOST=0.9978;RSQ=0.7978;ERATE=0.0003;THETA=0.0043;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25051153 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3012;AVGPOST=0.9970;RSQ=0.9947;ERATE=0.0004;THETA=0.0011;AC=657;AN=2184 GT:DS:GL:BD 0.30082417 0
1 25051178 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7728;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25051225 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3357;AVGPOST=0.9970;RSQ=0.9950;ERATE=0.0003;THETA=0.0020;AC=732;AN=2184 GT:DS:GL:BD 0.33516484 0
1 25051256 rs5773100 T TG 22247 PASS INDEL;BAVGPOST=0.978;BRSQ=0.956;LDAF=0.3582;AVGPOST=0.9875;RSQ=0.9801;ERATE=0.0005;THETA=0.0002;AC=786;AN=2184 GT:DS:GL:BD 0.35989010 0
1 25051258 . G GC 2645 PASS INDEL;BAVGPOST=0.934;BRSQ=0.851;LDAF=0.3066;AVGPOST=0.9460;RSQ=0.9079;ERATE=0.0013;THETA=0.0008;AC=684;AN=2184 GT:DS:GL:BD 0.31318682 0
1 25051259 . G GC 2769 PASS INDEL;BAVGPOST=0.933;BRSQ=0.849;LDAF=0.3064;AVGPOST=0.9433;RSQ=0.9046;ERATE=0.0007;THETA=0.0004;AC=683;AN=2184 GT:DS:GL:BD 0.31272894 0
1 25051429 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25051558 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6406;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25051662 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.589;LDAF=0.0027;AVGPOST=0.9963;RSQ=0.4566;ERATE=0.0007;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25051664 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25051716 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5601;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25051724 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7351;ERATE=0.0003;THETA=0.0035;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25051748 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7661;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25051768 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6927;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25051798 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25051823 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0160;AVGPOST=0.9989;RSQ=0.9682;ERATE=0.0003;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 25051846 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9470;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25051887 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.710;LDAF=0.0034;AVGPOST=0.9982;RSQ=0.7641;ERATE=0.0007;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25051895 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5687;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25052039 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25052040 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6773;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25052095 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0290;AVGPOST=0.9996;RSQ=0.9942;ERATE=0.0003;THETA=0.0011;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 25052169 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0226;AVGPOST=0.9995;RSQ=0.9919;ERATE=0.0003;THETA=0.0004;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 25052185 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0289;AVGPOST=0.9996;RSQ=0.9941;ERATE=0.0003;THETA=0.0003;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 25052247 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.873;LDAF=0.0061;AVGPOST=0.9970;RSQ=0.8033;ERATE=0.0006;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25052335 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.725;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4645;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25052365 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6332;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25052458 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.690;LDAF=0.0052;AVGPOST=0.9965;RSQ=0.7181;ERATE=0.0012;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25052490 . CTG C 206 PASS INDEL;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6418;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25052507 rs111298982 GACA G 2924 PASS INDEL;BAVGPOST=0.982;BRSQ=0.794;LDAF=0.0614;AVGPOST=0.9532;RSQ=0.6728;ERATE=0.0140;THETA=0.0005;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 25052550 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6464;ERATE=0.0003;THETA=0.0062;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25052580 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0290;AVGPOST=0.9996;RSQ=0.9934;ERATE=0.0003;THETA=0.0003;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 25052664 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.8890;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25052687 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.626;LDAF=0.0027;AVGPOST=0.9979;RSQ=0.6711;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25052758 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9473;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25052866 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.763;LDAF=0.0475;AVGPOST=0.9643;RSQ=0.7043;ERATE=0.0092;THETA=0.0002;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 25052868 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.637;LDAF=0.0143;AVGPOST=0.9903;RSQ=0.7355;ERATE=0.0008;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 25052922 . T TA 12752 PASS INDEL;BAVGPOST=0.966;BRSQ=0.926;LDAF=0.3033;AVGPOST=0.9585;RSQ=0.9254;ERATE=0.0072;THETA=0.0005;AC=662;AN=2184 GT:DS:GL:BD 0.30311355 0
1 25053041 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.751;LDAF=0.0165;AVGPOST=0.9950;RSQ=0.8869;ERATE=0.0007;THETA=0.0008;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 25053073 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.958;LDAF=0.3171;AVGPOST=0.9860;RSQ=0.9759;ERATE=0.0007;THETA=0.0006;AC=704;AN=2184 GT:DS:GL:BD 0.32234433 0
1 25053082 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.960;LDAF=0.2794;AVGPOST=0.9883;RSQ=0.9791;ERATE=0.0007;THETA=0.0005;AC=617;AN=2184 GT:DS:GL:BD 0.28250915 0
1 25053132 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7735;ERATE=0.0004;THETA=0.0025;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25053212 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7404;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25053426 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8767;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25053476 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0029;AVGPOST=0.9979;RSQ=0.7022;ERATE=0.0006;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25053520 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0058;AVGPOST=0.9989;RSQ=0.9145;ERATE=0.0004;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 25053603 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.664;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5192;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25053656 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.707;LDAF=0.0028;AVGPOST=0.9970;RSQ=0.5499;ERATE=0.0004;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25053689 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2976;AVGPOST=0.9974;RSQ=0.9952;ERATE=0.0004;THETA=0.0008;AC=651;AN=2184 GT:DS:GL:BD 0.29807693 0
1 25053718 . CCT C 216 PASS INDEL;BAVGPOST=0.983;BRSQ=0.585;LDAF=0.0350;AVGPOST=0.9557;RSQ=0.4642;ERATE=0.0121;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 25053727 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0056;AVGPOST=0.9989;RSQ=0.9119;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25053775 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.922;LDAF=0.0237;AVGPOST=0.9963;RSQ=0.9442;ERATE=0.0005;THETA=0.0016;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 25053784 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.942;LDAF=0.0227;AVGPOST=0.9989;RSQ=0.9784;ERATE=0.0004;THETA=0.0004;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 25053878 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0011;AVGPOST=0.9984;RSQ=0.3778;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25053895 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.734;LDAF=0.0033;AVGPOST=0.9965;RSQ=0.5862;ERATE=0.0009;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25053923 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0230;AVGPOST=0.9991;RSQ=0.9833;ERATE=0.0005;THETA=0.0017;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 25053924 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0019;AVGPOST=0.9973;RSQ=0.4214;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25053927 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5666;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25053971 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0028;AVGPOST=0.9981;RSQ=0.7112;ERATE=0.0006;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25054021 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6808;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25054052 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6282;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25054057 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0231;AVGPOST=0.9994;RSQ=0.9893;ERATE=0.0003;THETA=0.0007;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 25054076 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.5046;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25054092 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.900;LDAF=0.0140;AVGPOST=0.9988;RSQ=0.9660;ERATE=0.0003;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 25054184 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.924;LDAF=0.0328;AVGPOST=0.9947;RSQ=0.9343;ERATE=0.0005;THETA=0.0009;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 25054223 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3397;AVGPOST=0.9933;RSQ=0.9878;ERATE=0.0005;THETA=0.0004;AC=742;AN=2184 GT:DS:GL:BD 0.33974358 0
1 25054339 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0289;AVGPOST=0.9994;RSQ=0.9899;ERATE=0.0003;THETA=0.0006;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 25054463 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0229;AVGPOST=0.9998;RSQ=0.9963;ERATE=0.0003;THETA=0.0003;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 25054468 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6880;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25054528 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6902;ERATE=0.0003;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25054759 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0062;AVGPOST=0.9993;RSQ=0.9557;ERATE=0.0003;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 25054760 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0229;AVGPOST=0.9998;RSQ=0.9954;ERATE=0.0003;THETA=0.0013;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 25054879 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5490;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25054909 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.598;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4538;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25055082 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.604;LDAF=0.0021;AVGPOST=0.9975;RSQ=0.4678;ERATE=0.0006;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25055088 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0240;AVGPOST=0.9989;RSQ=0.9801;ERATE=0.0003;THETA=0.0006;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 25055103 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0014;AVGPOST=0.9992;RSQ=0.7410;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25055230 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.556;LDAF=0.0020;AVGPOST=0.9973;RSQ=0.4338;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25055322 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.775;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4932;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25055354 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.658;LDAF=0.0063;AVGPOST=0.9954;RSQ=0.6892;ERATE=0.0008;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25055364 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.676;LDAF=0.0024;AVGPOST=0.9962;RSQ=0.4266;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25055495 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.715;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6559;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25055521 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0236;AVGPOST=0.9984;RSQ=0.9700;ERATE=0.0006;THETA=0.0004;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 25055539 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8303;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25055553 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7797;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25055555 . TGGCAA T 103 PASS INDEL;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.6334;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25055560 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7944;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25055663 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0004;AVGPOST=0.9997;RSQ=0.6813;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25055759 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25055817 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25055916 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9553;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25055930 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9473;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25055949 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25055950 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.730;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6316;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25056028 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0229;AVGPOST=0.9999;RSQ=0.9982;ERATE=0.0003;THETA=0.0009;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 25056057 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.813;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9046;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25056075 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0018;AVGPOST=0.9974;RSQ=0.4583;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25056107 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2988;AVGPOST=0.9975;RSQ=0.9953;ERATE=0.0005;THETA=0.0004;AC=653;AN=2184 GT:DS:GL:BD 0.29899266 0
1 25056123 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6966;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25056164 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0062;AVGPOST=0.9995;RSQ=0.9689;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 25056415 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0193;AVGPOST=0.9985;RSQ=0.9663;ERATE=0.0003;THETA=0.0006;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 25056456 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9197;ERATE=0.0004;THETA=0.0014;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25056530 rs34077272 AG A 16711 PASS INDEL;BAVGPOST=0.962;BRSQ=0.916;LDAF=0.2974;AVGPOST=0.9869;RSQ=0.9762;ERATE=0.0008;THETA=0.0024;AC=654;AN=2184 GT:DS:GL:BD 0.29945055 0
1 25056532 . GT G 7957 PASS INDEL;BAVGPOST=0.962;BRSQ=0.915;LDAF=0.3008;AVGPOST=0.9858;RSQ=0.9748;ERATE=0.0004;THETA=0.0009;AC=660;AN=2184 GT:DS:GL:BD 0.30219781 0
1 25056563 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0239;AVGPOST=0.9979;RSQ=0.9616;ERATE=0.0005;THETA=0.0019;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 25056598 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0049;AVGPOST=0.9971;RSQ=0.7274;ERATE=0.0005;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25056854 . GGA G 69 PASS INDEL;BAVGPOST=0.737;BRSQ=0.050;LDAF=0.1295;AVGPOST=0.8271;RSQ=0.4006;ERATE=0.0093;THETA=0.0006;AC=198;AN=2184 GT:DS:GL:BD 0.09065934 0
1 25056882 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.606;LDAF=0.0037;AVGPOST=0.9935;RSQ=0.2665;ERATE=0.0007;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25057001 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.6758;AVGPOST=0.9936;RSQ=0.9880;ERATE=0.0009;THETA=0.0037;AC=1475;AN=2184 GT:DS:GL:BD 0.67536628 1
1 25057018 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0064;AVGPOST=0.9990;RSQ=0.9399;ERATE=0.0005;THETA=0.0009;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 25057032 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0229;AVGPOST=0.9998;RSQ=0.9963;ERATE=0.0003;THETA=0.0003;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 25057065 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0241;AVGPOST=0.9974;RSQ=0.9564;ERATE=0.0007;THETA=0.0006;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 25057249 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0017;AVGPOST=0.9988;RSQ=0.6769;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25057253 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4672;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25057361 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.963;LDAF=0.0221;AVGPOST=0.9985;RSQ=0.9726;ERATE=0.0004;THETA=0.0004;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 25057385 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.6687;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25057462 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.758;LDAF=0.0086;AVGPOST=0.9982;RSQ=0.9114;ERATE=0.0004;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 25057550 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.9098;ERATE=0.0004;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25057612 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0050;AVGPOST=0.9993;RSQ=0.9371;ERATE=0.0003;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25057657 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.7817;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25057750 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.8050;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25057780 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0023;AVGPOST=0.9984;RSQ=0.7083;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25058043 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0232;AVGPOST=0.9993;RSQ=0.9875;ERATE=0.0003;THETA=0.0005;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 25058047 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6684;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25058067 . T TG 8509 PASS INDEL;BAVGPOST=0.970;BRSQ=0.936;LDAF=0.3124;AVGPOST=0.9809;RSQ=0.9685;ERATE=0.0005;THETA=0.0006;AC=690;AN=2184 GT:DS:GL:BD 0.31593406 0
1 25058069 rs113311911 G GC 25212 PASS INDEL;BAVGPOST=0.971;BRSQ=0.939;LDAF=0.3137;AVGPOST=0.9807;RSQ=0.9684;ERATE=0.0005;THETA=0.0006;AC=692;AN=2184 GT:DS:GL:BD 0.31684983 0
1 25058154 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0006;AVGPOST=0.9990;RSQ=0.3384;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25058270 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.747;LDAF=0.0094;AVGPOST=0.9960;RSQ=0.8385;ERATE=0.0005;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 25058308 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7793;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25058514 . TG T 34 PASS INDEL;BAVGPOST=1.000;BRSQ=0.763;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5118;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25058604 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8420;ERATE=0.0005;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25058719 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.7540;ERATE=0.0003;THETA=0.0039;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25058746 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0052;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25058757 . AATG A 40 PASS INDEL;BAVGPOST=0.999;BRSQ=0.749;LDAF=0.0062;AVGPOST=0.9945;RSQ=0.6745;ERATE=0.0014;THETA=0.0018;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25058931 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.8177;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25059002 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0391;AVGPOST=0.9990;RSQ=0.9889;ERATE=0.0003;THETA=0.0009;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 25059365 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25059428 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2998;AVGPOST=0.9976;RSQ=0.9955;ERATE=0.0006;THETA=0.0006;AC=655;AN=2184 GT:DS:GL:BD 0.29990843 0
1 25059500 . TAGA T 2896 PASS INDEL;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0158;AVGPOST=0.9989;RSQ=0.9705;ERATE=0.0003;THETA=0.0006;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 25059545 . C CTATG 136 PASS INDEL;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8025;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25059620 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.544;LDAF=0.0024;AVGPOST=0.9968;RSQ=0.4703;ERATE=0.0012;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25059627 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0234;AVGPOST=0.9988;RSQ=0.9774;ERATE=0.0004;THETA=0.0005;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 25059661 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0251;AVGPOST=0.9960;RSQ=0.9377;ERATE=0.0008;THETA=0.0007;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 25059804 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.759;LDAF=0.0215;AVGPOST=0.9884;RSQ=0.7822;ERATE=0.0005;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 25059885 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.4287;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25060005 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.966;LDAF=0.0261;AVGPOST=0.9960;RSQ=0.9364;ERATE=0.0011;THETA=0.0009;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 25060140 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.629;LDAF=0.0043;AVGPOST=0.9953;RSQ=0.5955;ERATE=0.0005;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25060145 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.978;LDAF=0.2926;AVGPOST=0.9926;RSQ=0.9861;ERATE=0.0008;THETA=0.0005;AC=641;AN=2184 GT:DS:GL:BD 0.29349816 0
1 25060169 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.604;LDAF=0.0089;AVGPOST=0.9905;RSQ=0.5588;ERATE=0.0014;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 25060386 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0229;AVGPOST=0.9989;RSQ=0.9784;ERATE=0.0006;THETA=0.0004;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 25060418 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.827;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.5398;ERATE=0.0007;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25060443 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.5740;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25060598 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.698;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4644;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25060641 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4912;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25060844 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.7251;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25060908 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8036;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25061128 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25061292 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25061336 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0234;AVGPOST=0.9988;RSQ=0.9773;ERATE=0.0006;THETA=0.0003;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 25061502 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0234;AVGPOST=0.9988;RSQ=0.9787;ERATE=0.0003;THETA=0.0003;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 25061603 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0039;AVGPOST=0.9991;RSQ=0.9113;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25061646 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0296;AVGPOST=0.9980;RSQ=0.9728;ERATE=0.0004;THETA=0.0013;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 25061757 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7646;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25062034 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25062068 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0229;AVGPOST=0.9998;RSQ=0.9963;ERATE=0.0003;THETA=0.0003;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 25062086 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6745;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25062129 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9792;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25062149 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2995;AVGPOST=0.9973;RSQ=0.9952;ERATE=0.0004;THETA=0.0004;AC=655;AN=2184 GT:DS:GL:BD 0.29990843 0
1 25062226 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0020;AVGPOST=0.9984;RSQ=0.7193;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25062477 . G GTCTT 160 PASS INDEL;BAVGPOST=1.000;BRSQ=0.688;LDAF=0.0023;AVGPOST=0.9983;RSQ=0.7093;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25062526 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.775;LDAF=0.0063;AVGPOST=0.9958;RSQ=0.7501;ERATE=0.0005;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 25062639 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.950;LDAF=0.0084;AVGPOST=0.9969;RSQ=0.8707;ERATE=0.0004;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 25062686 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.718;LDAF=0.0030;AVGPOST=0.9970;RSQ=0.6010;ERATE=0.0008;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25062718 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.9102;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25062722 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.6167;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25062788 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0230;AVGPOST=0.9997;RSQ=0.9945;ERATE=0.0003;THETA=0.0003;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 25062799 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.5499;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25062813 rs10545746 AAG A 813 PASS INDEL;BAVGPOST=0.985;BRSQ=0.737;LDAF=0.0301;AVGPOST=0.9904;RSQ=0.8758;ERATE=0.0008;THETA=0.0007;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 25062818 rs71784221 AGAGAGAGT A 6278 PASS INDEL;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0231;AVGPOST=0.9994;RSQ=0.9883;ERATE=0.0004;THETA=0.0004;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 25062838 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.790;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.5447;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25062839 . G GTA 217 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0041;AVGPOST=0.9972;RSQ=0.7206;ERATE=0.0005;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25062851 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.654;LDAF=0.0030;AVGPOST=0.9959;RSQ=0.5127;ERATE=0.0005;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25063034 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0117;AVGPOST=0.9993;RSQ=0.9712;ERATE=0.0003;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 25063079 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25063213 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0238;AVGPOST=0.9995;RSQ=0.9905;ERATE=0.0004;THETA=0.0004;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 25063261 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0030;AVGPOST=0.9990;RSQ=0.8727;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25063283 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2996;AVGPOST=0.9979;RSQ=0.9959;ERATE=0.0003;THETA=0.0007;AC=655;AN=2184 GT:DS:GL:BD 0.29990843 0
1 25063297 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3001;AVGPOST=0.9961;RSQ=0.9932;ERATE=0.0005;THETA=0.0004;AC=656;AN=2184 GT:DS:GL:BD 0.30036631 0
1 25063317 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9341;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25063382 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.839;LDAF=0.0076;AVGPOST=0.9986;RSQ=0.9231;ERATE=0.0004;THETA=0.0007;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 25063386 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.774;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6380;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25063434 . TC T 17577 PASS INDEL;BAVGPOST=0.942;BRSQ=0.874;LDAF=0.6445;AVGPOST=0.8697;RSQ=0.7787;ERATE=0.0229;THETA=0.0004;AC=1475;AN=2184 GT:DS:GL:BD 0.67536628 1
1 25063486 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0083;AVGPOST=0.9910;RSQ=0.5693;ERATE=0.0020;THETA=0.0023;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25063627 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0048;AVGPOST=0.9983;RSQ=0.8605;ERATE=0.0005;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25063663 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.638;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25063798 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=0.9984;RSQ=0.8731;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25063869 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7182;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25064001 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2998;AVGPOST=0.9983;RSQ=0.9964;ERATE=0.0005;THETA=0.0003;AC=655;AN=2184 GT:DS:GL:BD 0.29990843 0
1 25064027 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7088;ERATE=0.0003;THETA=0.0041;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25064107 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.6475;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25064206 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.755;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6427;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25064219 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.813;LDAF=0.0069;AVGPOST=0.9939;RSQ=0.6699;ERATE=0.0011;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 25064229 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0030;AVGPOST=0.9993;RSQ=0.8889;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25064253 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.774;LDAF=0.0207;AVGPOST=0.9911;RSQ=0.8316;ERATE=0.0005;THETA=0.0006;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 25064337 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.950;LDAF=0.0175;AVGPOST=0.9983;RSQ=0.9611;ERATE=0.0004;THETA=0.0008;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 25064475 . C CA 340 PASS INDEL;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.8758;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25064724 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.8699;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25064763 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.711;LDAF=0.0179;AVGPOST=0.9902;RSQ=0.7907;ERATE=0.0006;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 25064777 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.743;LDAF=0.0027;AVGPOST=0.9977;RSQ=0.6283;ERATE=0.0006;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25064905 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0023;AVGPOST=0.9977;RSQ=0.5768;ERATE=0.0006;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25064951 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6555;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25064990 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.985;LDAF=0.2992;AVGPOST=0.9961;RSQ=0.9924;ERATE=0.0009;THETA=0.0005;AC=655;AN=2184 GT:DS:GL:BD 0.29990843 0
1 25065114 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.526;LDAF=0.0024;AVGPOST=0.9980;RSQ=0.6246;ERATE=0.0008;THETA=0.0016;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25065118 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0234;AVGPOST=0.9991;RSQ=0.9799;ERATE=0.0003;THETA=0.0007;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 25065199 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.972;LDAF=0.3236;AVGPOST=0.9914;RSQ=0.9846;ERATE=0.0015;THETA=0.0006;AC=709;AN=2184 GT:DS:GL:BD 0.32463369 0
1 25065228 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.890;LDAF=0.0153;AVGPOST=0.9940;RSQ=0.8327;ERATE=0.0008;THETA=0.0082;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 25065335 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0164;AVGPOST=0.9982;RSQ=0.9534;ERATE=0.0004;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 25065347 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.828;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7868;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25065425 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0245;AVGPOST=0.9984;RSQ=0.9755;ERATE=0.0003;THETA=0.0042;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 25065579 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7406;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25065754 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.632;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.8028;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25065872 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.978;LDAF=0.2203;AVGPOST=0.9931;RSQ=0.9835;ERATE=0.0005;THETA=0.0003;AC=479;AN=2184 GT:DS:GL:BD 0.21932234 0
1 25065940 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0192;AVGPOST=0.9984;RSQ=0.9602;ERATE=0.0003;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 25066035 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0043;AVGPOST=0.9987;RSQ=0.8745;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25066110 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25066122 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.6970;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25066168 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.863;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8914;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25066235 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9128;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25066322 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6373;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25066448 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6505;AVGPOST=0.9979;RSQ=0.9961;ERATE=0.0004;THETA=0.0004;AC=1422;AN=2184 GT:DS:GL:BD 0.65109891 1
1 25066556 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0008;AVGPOST=0.9989;RSQ=0.5140;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25066750 rs113701301 T TA 2127 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0235;AVGPOST=0.9985;RSQ=0.9749;ERATE=0.0004;THETA=0.0006;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 25066862 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.884;LDAF=0.0084;AVGPOST=0.9965;RSQ=0.8199;ERATE=0.0007;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 25066880 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.777;LDAF=0.0152;AVGPOST=0.9910;RSQ=0.7592;ERATE=0.0008;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 25067002 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.750;LDAF=0.0029;AVGPOST=0.9952;RSQ=0.4237;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25067150 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25067435 . C CA 17 PASS INDEL;BAVGPOST=0.993;BRSQ=0.465;LDAF=0.0168;AVGPOST=0.9789;RSQ=0.5298;ERATE=0.0018;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 25067454 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.2806;AVGPOST=0.9859;RSQ=0.9735;ERATE=0.0015;THETA=0.0003;AC=609;AN=2184 GT:DS:GL:BD 0.27884614 0
1 25067500 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9473;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25067566 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25067664 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0032;AVGPOST=0.9975;RSQ=0.7637;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25067680 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6433;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25067709 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0010;AVGPOST=0.9987;RSQ=0.4699;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25068029 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6936;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25068048 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.744;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8366;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25068382 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0034;AVGPOST=0.9986;RSQ=0.8050;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25068625 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0035;AVGPOST=0.9986;RSQ=0.8363;ERATE=0.0004;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25068654 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.664;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.6107;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25068729 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.862;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7012;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25068835 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6533;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25068905 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0261;AVGPOST=0.9998;RSQ=0.9959;ERATE=0.0003;THETA=0.0006;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 25068914 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25068939 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25068974 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5871;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25069077 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0033;AVGPOST=0.9987;RSQ=0.8273;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25069187 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9213;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25069199 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0055;AVGPOST=0.9998;RSQ=0.9844;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 25069362 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0051;AVGPOST=0.9991;RSQ=0.9260;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25069379 rs113480606 C CT 414 PASS INDEL;BAVGPOST=0.987;BRSQ=0.584;LDAF=0.0226;AVGPOST=0.9739;RSQ=0.5398;ERATE=0.0080;THETA=0.0002;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 25069438 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5167;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25069463 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.823;LDAF=0.0056;AVGPOST=0.9986;RSQ=0.8877;ERATE=0.0004;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 25069594 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9265;ERATE=0.0004;THETA=0.0012;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25069626 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6903;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25069635 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.709;LDAF=0.0042;AVGPOST=0.9968;RSQ=0.6919;ERATE=0.0005;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25069669 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6395;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25069812 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0233;AVGPOST=0.9996;RSQ=0.9928;ERATE=0.0003;THETA=0.0003;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 25069879 . C CA 87 PASS INDEL;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0018;AVGPOST=0.9979;RSQ=0.5306;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25069897 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9076;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25069939 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3091;AVGPOST=0.9968;RSQ=0.9935;ERATE=0.0008;THETA=0.0005;AC=675;AN=2184 GT:DS:GL:BD 0.30906594 0
1 25069957 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4845;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25070042 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0031;AVGPOST=0.9994;RSQ=0.9054;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25070230 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6499;AVGPOST=0.9976;RSQ=0.9957;ERATE=0.0003;THETA=0.0003;AC=1421;AN=2184 GT:DS:GL:BD 0.65064102 1
1 25070309 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.667;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5723;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25070382 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6253;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25070477 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0078;AVGPOST=0.9986;RSQ=0.9361;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 25070497 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0041;AVGPOST=0.9990;RSQ=0.9273;ERATE=0.0003;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25070703 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6931;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25071192 . AAAAAAAT A 1541 PASS INDEL;BAVGPOST=0.776;BRSQ=0.448;LDAF=0.2977;AVGPOST=0.7351;RSQ=0.4805;ERATE=0.0197;THETA=0.0005;AC=511;AN=2184 GT:DS:GL:BD 0.23397435 0
1 25071195 rs66726980 AAAATAT A 1706 PASS INDEL;BAVGPOST=0.716;BRSQ=0.310;LDAF=0.3173;AVGPOST=0.7229;RSQ=0.4649;ERATE=0.0213;THETA=0.0003;AC=554;AN=2184 GT:DS:GL:BD 0.25366300 0
1 25071495 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.594;LDAF=0.0039;AVGPOST=0.9969;RSQ=0.7064;ERATE=0.0005;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25071575 rs3838977 T TC 6828 PASS INDEL;BAVGPOST=0.931;BRSQ=0.838;LDAF=0.2712;AVGPOST=0.9323;RSQ=0.8702;ERATE=0.0052;THETA=0.0021;AC=597;AN=2184 GT:DS:GL:BD 0.27335164 0
1 25071580 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.932;LDAF=0.0177;AVGPOST=0.9920;RSQ=0.8037;ERATE=0.0009;THETA=0.0008;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 25071580 . C CT 174 PASS INDEL;BAVGPOST=0.777;BRSQ=0.434;LDAF=0.2492;AVGPOST=0.8720;RSQ=0.7315;ERATE=0.0031;THETA=0.0005;AC=573;AN=2184 GT:DS:GL:BD 0.26236263 0
1 25071668 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.987;LDAF=0.0397;AVGPOST=0.9976;RSQ=0.9701;ERATE=0.0006;THETA=0.0032;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 25071842 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.279;LDAF=0.0110;AVGPOST=0.9872;RSQ=0.5402;ERATE=0.0007;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 25071880 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.618;LDAF=0.0231;AVGPOST=0.9849;RSQ=0.7713;ERATE=0.0011;THETA=0.0004;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 25072123 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0144;AVGPOST=0.9987;RSQ=0.9638;ERATE=0.0003;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 25072214 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.449;LDAF=0.0023;AVGPOST=0.9965;RSQ=0.3451;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25072675 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7640;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25072698 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.778;LDAF=0.0050;AVGPOST=0.9966;RSQ=0.7466;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25072965 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0050;AVGPOST=0.9964;RSQ=0.7424;ERATE=0.0005;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25073020 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2763;AVGPOST=0.9970;RSQ=0.9938;ERATE=0.0003;THETA=0.0007;AC=605;AN=2184 GT:DS:GL:BD 0.27701464 0
1 25073048 . T TA 77 PASS INDEL;BAVGPOST=0.996;BRSQ=0.609;LDAF=0.0100;AVGPOST=0.9887;RSQ=0.5476;ERATE=0.0029;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 25073059 . CTT C 596 PASS INDEL;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.6982;ERATE=0.0004;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25073167 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.794;LDAF=0.0131;AVGPOST=0.9961;RSQ=0.8785;ERATE=0.0005;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 25073211 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0050;AVGPOST=0.9974;RSQ=0.8111;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25073238 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.634;LDAF=0.0029;AVGPOST=0.9971;RSQ=0.6255;ERATE=0.0006;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25073351 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0279;AVGPOST=0.9989;RSQ=0.9832;ERATE=0.0003;THETA=0.0005;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 25073394 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0475;AVGPOST=0.9989;RSQ=0.9920;ERATE=0.0004;THETA=0.0019;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 25073571 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.5559;AVGPOST=0.9972;RSQ=0.9955;ERATE=0.0006;THETA=0.0007;AC=1215;AN=2184 GT:DS:GL:BD 0.55631870 1
1 25073586 rs72168311 A AT 825 PASS INDEL;BAVGPOST=0.613;BRSQ=0.160;LDAF=0.3459;AVGPOST=0.6408;RSQ=0.3050;ERATE=0.0370;THETA=0.0006;AC=553;AN=2184 GT:DS:GL:BD 0.25320512 0
1 25073644 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0276;AVGPOST=0.9995;RSQ=0.9917;ERATE=0.0004;THETA=0.0004;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 25073762 rs58408970 C CA 556 PASS INDEL;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0071;AVGPOST=0.9984;RSQ=0.9035;ERATE=0.0005;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 25073764 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.3275;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25073797 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.937;LDAF=0.0516;AVGPOST=0.9885;RSQ=0.9154;ERATE=0.0014;THETA=0.0003;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 25073823 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.413;LDAF=0.0095;AVGPOST=0.9881;RSQ=0.5577;ERATE=0.0005;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 25073852 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.736;LDAF=0.0033;AVGPOST=0.9982;RSQ=0.7539;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25073996 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.804;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6983;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25074118 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.767;LDAF=0.0031;AVGPOST=0.9972;RSQ=0.6360;ERATE=0.0007;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25074171 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0203;AVGPOST=0.9983;RSQ=0.9728;ERATE=0.0003;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 25074342 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.524;LDAF=0.0022;AVGPOST=0.9986;RSQ=0.7045;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25074346 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.598;LDAF=0.0050;AVGPOST=0.9949;RSQ=0.6099;ERATE=0.0007;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25074370 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.4500;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25074378 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.5901;ERATE=0.0006;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25074392 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.743;LDAF=0.0033;AVGPOST=0.9978;RSQ=0.7283;ERATE=0.0006;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25074554 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7282;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25074572 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0039;AVGPOST=0.9988;RSQ=0.8838;ERATE=0.0004;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25074726 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0227;AVGPOST=0.9994;RSQ=0.9899;ERATE=0.0003;THETA=0.0002;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 25074887 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0351;AVGPOST=0.9990;RSQ=0.9880;ERATE=0.0004;THETA=0.0006;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 25074897 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.768;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7303;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25074917 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7909;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25074994 . T TTG 22 PASS INDEL;BAVGPOST=1.000;BRSQ=0.712;LDAF=0.0021;AVGPOST=0.9970;RSQ=0.4455;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25075020 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.543;LDAF=0.0024;AVGPOST=0.9962;RSQ=0.3169;ERATE=0.0010;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25075368 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0226;AVGPOST=0.9997;RSQ=0.9951;ERATE=0.0003;THETA=0.0008;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 25075409 . TA T 4964 PASS INDEL;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0276;AVGPOST=0.9989;RSQ=0.9833;ERATE=0.0003;THETA=0.0004;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 25075657 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.736;LDAF=0.0022;AVGPOST=0.9964;RSQ=0.3420;ERATE=0.0009;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25075751 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6639;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25075801 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5844;AVGPOST=0.9986;RSQ=0.9976;ERATE=0.0004;THETA=0.0006;AC=1277;AN=2184 GT:DS:GL:BD 0.58470696 1
1 25075838 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.943;LDAF=0.0144;AVGPOST=0.9988;RSQ=0.9653;ERATE=0.0003;THETA=0.0006;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 25075889 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0065;AVGPOST=0.9997;RSQ=0.9800;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 25075981 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25075983 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0029;AVGPOST=0.9986;RSQ=0.8234;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25076040 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25076059 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.906;LDAF=0.0102;AVGPOST=0.9977;RSQ=0.9105;ERATE=0.0005;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 25076069 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6494;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25076269 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4510;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25076278 . GTC G 54 PASS INDEL;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5595;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25076296 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.987;LDAF=0.0504;AVGPOST=0.9989;RSQ=0.9926;ERATE=0.0004;THETA=0.0003;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 25076560 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0028;AVGPOST=0.9986;RSQ=0.7911;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25076575 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.5383;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25076575 . ATAAG A 358 PASS INDEL;BAVGPOST=0.998;BRSQ=0.685;LDAF=0.0034;AVGPOST=0.9987;RSQ=0.8306;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25076620 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0056;AVGPOST=0.9987;RSQ=0.8939;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25076636 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0142;AVGPOST=0.9960;RSQ=0.8803;ERATE=0.0005;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 25076767 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.8893;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25076811 rs34345899 TGGTA T 21941 PASS INDEL;BAVGPOST=0.981;BRSQ=0.931;LDAF=0.1250;AVGPOST=0.9834;RSQ=0.9474;ERATE=0.0004;THETA=0.0006;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 25076853 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25077260 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5805;ERATE=0.0003;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25077297 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0021;AVGPOST=0.9989;RSQ=0.7765;ERATE=0.0004;THETA=0.0013;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25077424 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.711;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25077509 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25077518 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0055;AVGPOST=0.9997;RSQ=0.9764;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 25077568 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25077763 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.736;LDAF=0.0021;AVGPOST=0.9977;RSQ=0.4996;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25077787 . G GTC 162 PASS INDEL;BAVGPOST=0.999;BRSQ=0.648;LDAF=0.0047;AVGPOST=0.9950;RSQ=0.5536;ERATE=0.0005;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25077910 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0503;AVGPOST=0.9979;RSQ=0.9865;ERATE=0.0004;THETA=0.0004;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 25077944 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6020;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25077977 rs113993197 G GC 21658 PASS INDEL;BAVGPOST=0.867;BRSQ=0.780;LDAF=0.5399;AVGPOST=0.8622;RSQ=0.8060;ERATE=0.0102;THETA=0.0003;AC=1236;AN=2184 GT:DS:GL:BD 0.56593406 1
1 25078009 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.846;LDAF=0.0077;AVGPOST=0.9919;RSQ=0.6134;ERATE=0.0007;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 25078025 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.800;LDAF=0.0021;AVGPOST=0.9971;RSQ=0.4327;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25078032 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.870;LDAF=0.0055;AVGPOST=0.9965;RSQ=0.7506;ERATE=0.0005;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25078061 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5566;AVGPOST=0.9971;RSQ=0.9954;ERATE=0.0006;THETA=0.0020;AC=1216;AN=2184 GT:DS:GL:BD 0.55677658 1
1 25078135 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0168;AVGPOST=0.9977;RSQ=0.9466;ERATE=0.0004;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 25078145 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0145;AVGPOST=0.9983;RSQ=0.9504;ERATE=0.0003;THETA=0.0008;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 25078175 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.453;LDAF=0.0030;AVGPOST=0.9970;RSQ=0.6170;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25078328 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.5565;AVGPOST=0.9971;RSQ=0.9952;ERATE=0.0005;THETA=0.0005;AC=1216;AN=2184 GT:DS:GL:BD 0.55677658 1
1 25078371 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2797;AVGPOST=0.9977;RSQ=0.9955;ERATE=0.0004;THETA=0.0006;AC=611;AN=2184 GT:DS:GL:BD 0.27976191 0
1 25078426 . CTTG C 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7416;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25078448 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0034;AVGPOST=0.9981;RSQ=0.8177;ERATE=0.0005;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25078769 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7871;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25078828 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6366;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25078898 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.8012;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25078912 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25078928 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.8156;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25078943 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0189;AVGPOST=0.9993;RSQ=0.9870;ERATE=0.0003;THETA=0.0005;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 25078947 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6037;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25079010 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7595;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25079036 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7640;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25079306 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0062;AVGPOST=0.9947;RSQ=0.6701;ERATE=0.0009;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25079359 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.972;LDAF=0.3079;AVGPOST=0.9828;RSQ=0.9719;ERATE=0.0006;THETA=0.0005;AC=673;AN=2184 GT:DS:GL:BD 0.30815017 0
1 25079414 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.408;LDAF=0.0047;AVGPOST=0.9946;RSQ=0.5462;ERATE=0.0007;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25079675 . T TA 446 PASS INDEL;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0044;AVGPOST=0.9991;RSQ=0.9124;ERATE=0.0003;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25079716 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.845;LDAF=0.0032;AVGPOST=0.9974;RSQ=0.6670;ERATE=0.0012;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25079717 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.746;LDAF=0.0070;AVGPOST=0.9977;RSQ=0.8781;ERATE=0.0005;THETA=0.0009;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 25079781 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.838;LDAF=0.0089;AVGPOST=0.9975;RSQ=0.8887;ERATE=0.0004;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 25079782 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0137;AVGPOST=0.9980;RSQ=0.9479;ERATE=0.0003;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 25079839 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.807;LDAF=0.0064;AVGPOST=0.9981;RSQ=0.8883;ERATE=0.0004;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 25079873 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7363;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25079890 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.767;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.7071;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25079969 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9315;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25080101 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.5010;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25080183 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.5853;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25080221 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.722;LDAF=0.0042;AVGPOST=0.9972;RSQ=0.7263;ERATE=0.0006;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25080390 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.708;LDAF=0.0030;AVGPOST=0.9967;RSQ=0.5770;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25080468 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6465;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25080522 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2188;AVGPOST=0.9979;RSQ=0.9946;ERATE=0.0004;THETA=0.0004;AC=478;AN=2184 GT:DS:GL:BD 0.21886447 0
1 25081065 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25081068 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25081079 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25081207 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6942;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25081295 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.789;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25081342 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0286;AVGPOST=0.9992;RSQ=0.9872;ERATE=0.0004;THETA=0.0013;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 25081665 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.970;LDAF=0.5404;AVGPOST=0.9655;RSQ=0.9497;ERATE=0.0014;THETA=0.0007;AC=1187;AN=2184 GT:DS:GL:BD 0.54349816 1
1 25081700 . GC G 103 PASS INDEL;BAVGPOST=0.999;BRSQ=0.605;LDAF=0.0026;AVGPOST=0.9961;RSQ=0.3607;ERATE=0.0010;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25081704 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.825;LDAF=0.0017;AVGPOST=0.9976;RSQ=0.4268;ERATE=0.0006;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25081890 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.432;LDAF=0.0049;AVGPOST=0.9941;RSQ=0.4667;ERATE=0.0008;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25082145 . TGG T 274 PASS INDEL;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6715;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25082381 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.499;LDAF=0.0043;AVGPOST=0.9932;RSQ=0.3813;ERATE=0.0009;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25082415 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.624;LDAF=0.0091;AVGPOST=0.9924;RSQ=0.6831;ERATE=0.0007;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 25082616 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.509;LDAF=0.0058;AVGPOST=0.9914;RSQ=0.4133;ERATE=0.0010;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25082681 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.544;LDAF=0.0022;AVGPOST=0.9965;RSQ=0.2850;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25082745 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.811;LDAF=0.0045;AVGPOST=0.9975;RSQ=0.7452;ERATE=0.0006;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25082852 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.822;LDAF=0.0150;AVGPOST=0.9937;RSQ=0.8467;ERATE=0.0006;THETA=0.0008;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 25082856 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4791;ERATE=0.0006;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25082990 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6262;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25083019 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0031;AVGPOST=0.9990;RSQ=0.9012;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25083042 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.874;LDAF=0.0173;AVGPOST=0.9969;RSQ=0.9236;ERATE=0.0003;THETA=0.0024;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 25083053 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7822;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25083072 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0024;AVGPOST=0.9982;RSQ=0.7033;ERATE=0.0007;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25083108 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.874;LDAF=0.0089;AVGPOST=0.9967;RSQ=0.8564;ERATE=0.0005;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 25083237 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.637;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5086;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25083248 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0052;AVGPOST=0.9978;RSQ=0.8244;ERATE=0.0005;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25083287 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8582;ERATE=0.0005;THETA=0.0045;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25083378 . G GT 73 PASS INDEL;BAVGPOST=0.978;BRSQ=0.400;LDAF=0.0334;AVGPOST=0.9536;RSQ=0.4133;ERATE=0.0107;THETA=0.0012;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 25083391 . TG T 1715 PASS INDEL;BAVGPOST=0.996;BRSQ=0.938;LDAF=0.0301;AVGPOST=0.9921;RSQ=0.8989;ERATE=0.0009;THETA=0.0009;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 25083626 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.966;LDAF=0.0309;AVGPOST=0.9940;RSQ=0.9230;ERATE=0.0005;THETA=0.0009;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 25083628 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0197;AVGPOST=0.9990;RSQ=0.9797;ERATE=0.0004;THETA=0.0006;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 25083660 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.564;LDAF=0.0022;AVGPOST=0.9969;RSQ=0.3789;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25083713 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.698;LDAF=0.0018;AVGPOST=0.9979;RSQ=0.4969;ERATE=0.0006;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25083780 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.472;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4563;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25083865 . CT C 400 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9265;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25084050 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.841;LDAF=0.0773;AVGPOST=0.9824;RSQ=0.9124;ERATE=0.0004;THETA=0.0005;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 25084153 rs112697661 G GA 2670 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0252;AVGPOST=0.9971;RSQ=0.9557;ERATE=0.0008;THETA=0.0005;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 25084239 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5723;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25084267 . C CT 25 PASS INDEL;BAVGPOST=0.994;BRSQ=0.454;LDAF=0.0136;AVGPOST=0.9811;RSQ=0.4273;ERATE=0.0049;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 25084307 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5675;ERATE=0.0004;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25084383 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.684;LDAF=0.0036;AVGPOST=0.9967;RSQ=0.6366;ERATE=0.0006;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25084455 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0196;AVGPOST=0.9989;RSQ=0.9786;ERATE=0.0003;THETA=0.0009;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 25084636 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0238;AVGPOST=0.9990;RSQ=0.9854;ERATE=0.0003;THETA=0.0006;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 25084752 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25084779 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0049;AVGPOST=0.9979;RSQ=0.8196;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25084932 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0165;AVGPOST=0.9981;RSQ=0.9459;ERATE=0.0006;THETA=0.0007;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 25084953 . A AT 250 PASS INDEL;BAVGPOST=0.943;BRSQ=0.391;LDAF=0.0854;AVGPOST=0.8851;RSQ=0.3919;ERATE=0.0206;THETA=0.0008;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 25085030 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.690;LDAF=0.0088;AVGPOST=0.9889;RSQ=0.5739;ERATE=0.0004;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25085078 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0020;AVGPOST=0.9983;RSQ=0.6171;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25085183 . T TG 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0019;AVGPOST=0.9982;RSQ=0.6046;ERATE=0.0005;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25085358 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25085399 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.8026;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25085413 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.743;LDAF=0.0043;AVGPOST=0.9964;RSQ=0.7189;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25085496 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4750;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25085536 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0015;AVGPOST=0.9982;RSQ=0.5137;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25085778 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.5678;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25085792 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7635;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25085905 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6380;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25085922 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0051;AVGPOST=0.9997;RSQ=0.9703;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25086040 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2217;AVGPOST=0.9951;RSQ=0.9886;ERATE=0.0004;THETA=0.0007;AC=485;AN=2184 GT:DS:GL:BD 0.22206959 0
1 25086178 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0017;AVGPOST=0.9974;RSQ=0.4534;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25086206 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0067;AVGPOST=0.9983;RSQ=0.9101;ERATE=0.0004;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 25086315 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6545;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25086340 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6542;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25086451 . C CA 61 PASS INDEL;BAVGPOST=0.990;BRSQ=0.502;LDAF=0.0190;AVGPOST=0.9771;RSQ=0.5209;ERATE=0.0071;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 25086725 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.642;LDAF=0.0028;AVGPOST=0.9980;RSQ=0.6922;ERATE=0.0003;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25086804 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.752;LDAF=0.0019;AVGPOST=0.9971;RSQ=0.3622;ERATE=0.0004;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25086839 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.604;LDAF=0.0021;AVGPOST=0.9978;RSQ=0.5865;ERATE=0.0005;THETA=0.0051;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25086872 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0138;AVGPOST=0.9983;RSQ=0.9576;ERATE=0.0003;THETA=0.0009;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 25086951 . T TA 489 PASS INDEL;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0040;AVGPOST=0.9984;RSQ=0.8396;ERATE=0.0003;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25087106 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6786;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25087213 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6578;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25087285 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25087439 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0137;AVGPOST=0.9998;RSQ=0.9929;ERATE=0.0003;THETA=0.0011;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 25087584 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0237;AVGPOST=0.9993;RSQ=0.9901;ERATE=0.0003;THETA=0.0007;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 25087667 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0159;AVGPOST=0.9995;RSQ=0.9876;ERATE=0.0003;THETA=0.0009;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 25087801 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0005;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25087941 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0051;AVGPOST=1.0000;RSQ=0.9957;ERATE=0.0003;THETA=0.0027;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25088111 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8497;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25088158 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25088201 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7263;ERATE=0.0003;THETA=0.0034;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25088284 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25088288 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25088341 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7457;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25088400 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.720;LDAF=0.0017;AVGPOST=0.9987;RSQ=0.6916;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25088413 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8517;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25088571 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25088573 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.657;LDAF=0.0024;AVGPOST=0.9969;RSQ=0.5020;ERATE=0.0009;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25088778 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0058;AVGPOST=0.9981;RSQ=0.8816;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25088857 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8174;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25089084 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25089198 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9998;RSQ=0.9618;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25089235 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7309;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25089242 . AC A 77 PASS INDEL;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25089414 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0029;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25089524 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.744;LDAF=0.0017;AVGPOST=0.9976;RSQ=0.4866;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25089747 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.807;LDAF=0.0024;AVGPOST=0.9995;RSQ=0.9111;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25089780 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9463;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25089829 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7479;ERATE=0.0004;THETA=0.0017;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25089899 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0039;AVGPOST=0.9957;RSQ=0.5957;ERATE=0.0008;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25090299 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.840;LDAF=0.0049;AVGPOST=0.9984;RSQ=0.8740;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25090446 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.5848;AVGPOST=0.9971;RSQ=0.9955;ERATE=0.0004;THETA=0.0009;AC=1276;AN=2184 GT:DS:GL:BD 0.58424908 1
1 25090486 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25090806 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.583;LDAF=0.0042;AVGPOST=0.9972;RSQ=0.7216;ERATE=0.0005;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25090820 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0043;AVGPOST=0.9980;RSQ=0.7975;ERATE=0.0004;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25091059 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.566;LDAF=0.0078;AVGPOST=0.9916;RSQ=0.5902;ERATE=0.0014;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25091108 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9870;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25091132 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0030;AVGPOST=0.9962;RSQ=0.5261;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25091226 . CTTTT C 105 PASS INDEL;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25091502 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.5137;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25091573 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6459;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25091653 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9169;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25091666 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9829;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25091681 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.712;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7192;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25091706 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0043;AVGPOST=0.9987;RSQ=0.8791;ERATE=0.0004;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25091720 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25091843 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0079;AVGPOST=0.9949;RSQ=0.7339;ERATE=0.0008;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 25091963 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5529;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25092003 rs11352551 AT A 451 PASS INDEL;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0041;AVGPOST=0.9994;RSQ=0.9401;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25092500 . G GT 219 PASS INDEL;BAVGPOST=0.999;BRSQ=0.832;LDAF=0.0085;AVGPOST=0.9934;RSQ=0.6803;ERATE=0.0012;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 25092511 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6313;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25092643 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0031;AVGPOST=0.9988;RSQ=0.8335;ERATE=0.0005;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25092657 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.603;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4864;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25092932 . T TA 233 PASS INDEL;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0029;AVGPOST=0.9988;RSQ=0.8151;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25093080 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.669;LDAF=0.0023;AVGPOST=0.9982;RSQ=0.6606;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25093241 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5640;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25093252 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.805;LDAF=0.0029;AVGPOST=0.9987;RSQ=0.8161;ERATE=0.0005;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25093336 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0159;AVGPOST=0.9993;RSQ=0.9822;ERATE=0.0003;THETA=0.0005;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 25093348 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.938;LDAF=0.9681;AVGPOST=0.9982;RSQ=0.9736;ERATE=0.0005;THETA=0.0016;AC=2115;AN=2184 GT:DS:GL:BD 0.96840662 1
1 25093432 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5836;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25093473 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.957;BRSQ=0.889;LDAF=0.7875;AVGPOST=0.9731;RSQ=0.9382;ERATE=0.0015;THETA=0.0007;AC=1720;AN=2184 GT:DS:GL:BD 0.78754580 1
1 25093535 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.954;BRSQ=0.852;LDAF=0.2133;AVGPOST=0.9387;RSQ=0.8523;ERATE=0.0096;THETA=0.0005;AC=457;AN=2184 GT:DS:GL:BD 0.20924908 0
1 25093558 rs74619685 CA C 1001 PASS INDEL;BAVGPOST=0.997;BRSQ=0.971;LDAF=0.0348;AVGPOST=0.9947;RSQ=0.9362;ERATE=0.0007;THETA=0.0003;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 25093573 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9073;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25093637 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.943;LDAF=0.2786;AVGPOST=0.9757;RSQ=0.9541;ERATE=0.0010;THETA=0.0004;AC=607;AN=2184 GT:DS:GL:BD 0.27793041 0
1 25093656 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0207;AVGPOST=0.9992;RSQ=0.9829;ERATE=0.0004;THETA=0.0035;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 25093875 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.7703;ERATE=0.0006;THETA=0.0032;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25094126 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.880;LDAF=0.0023;AVGPOST=0.9982;RSQ=0.6900;ERATE=0.0007;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25094233 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.985;LDAF=0.6487;AVGPOST=0.9925;RSQ=0.9871;ERATE=0.0008;THETA=0.0007;AC=1422;AN=2184 GT:DS:GL:BD 0.65109891 1
1 25094342 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.651;LDAF=0.0056;AVGPOST=0.9939;RSQ=0.5577;ERATE=0.0009;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25094344 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.927;BRSQ=0.857;LDAF=0.5997;AVGPOST=0.8894;RSQ=0.8155;ERATE=0.0177;THETA=0.0007;AC=1341;AN=2184 GT:DS:GL:BD 0.61401099 1
1 25094532 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4513;ERATE=0.0005;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25094714 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5846;AVGPOST=0.9978;RSQ=0.9961;ERATE=0.0005;THETA=0.0006;AC=1278;AN=2184 GT:DS:GL:BD 0.58516484 1
1 25094831 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.7085;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25094850 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.5973;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25094973 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0238;AVGPOST=0.9981;RSQ=0.9742;ERATE=0.0003;THETA=0.0009;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 25095014 . T TA 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.3825;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25095024 . GTCT G 1854 PASS INDEL;BAVGPOST=0.998;BRSQ=0.945;LDAF=0.0164;AVGPOST=0.9983;RSQ=0.9459;ERATE=0.0004;THETA=0.0009;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 25095109 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6351;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25095582 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5584;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25095625 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5412;ERATE=0.0003;THETA=0.0049;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25095646 . CATA C 5483 PASS INDEL;BAVGPOST=0.997;BRSQ=0.971;LDAF=0.0311;AVGPOST=0.9953;RSQ=0.9474;ERATE=0.0003;THETA=0.0004;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 25095653 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.795;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7395;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25096086 . CAG C 660 PASS INDEL;BAVGPOST=0.998;BRSQ=0.833;LDAF=0.0068;AVGPOST=0.9968;RSQ=0.8139;ERATE=0.0005;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 25096182 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25096202 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0036;AVGPOST=0.9964;RSQ=0.5797;ERATE=0.0015;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25096264 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5491;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25096290 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.623;LDAF=0.0016;AVGPOST=0.9980;RSQ=0.5457;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25096301 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5388;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25096345 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.744;LDAF=0.0030;AVGPOST=0.9982;RSQ=0.7634;ERATE=0.0005;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25096366 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.587;LDAF=0.0117;AVGPOST=0.9864;RSQ=0.5546;ERATE=0.0035;THETA=0.0008;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 25096623 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25096658 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25096896 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9265;ERATE=0.0004;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25097030 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0074;AVGPOST=0.9969;RSQ=0.8624;ERATE=0.0004;THETA=0.0021;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 25097044 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5442;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25097187 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0035;AVGPOST=0.9986;RSQ=0.8089;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25097214 rs35140067 ATTC A 58483 PASS INDEL;BAVGPOST=0.974;BRSQ=0.955;LDAF=0.5761;AVGPOST=0.9799;RSQ=0.9720;ERATE=0.0005;THETA=0.0004;AC=1256;AN=2184 GT:DS:GL:BD 0.57509160 1
1 25097221 . TTC T 30761 PASS INDEL;BAVGPOST=0.947;BRSQ=0.900;LDAF=0.5049;AVGPOST=0.9435;RSQ=0.9151;ERATE=0.0005;THETA=0.0003;AC=1104;AN=2184 GT:DS:GL:BD 0.50549453 1
1 25097222 rs58022784 TC T 23745 PASS INDEL;BAVGPOST=0.947;BRSQ=0.900;LDAF=0.5032;AVGPOST=0.9426;RSQ=0.9139;ERATE=0.0006;THETA=0.0010;AC=1098;AN=2184 GT:DS:GL:BD 0.50274724 1
1 25097223 rs58022784 CT C 152 PASS INDEL;BAVGPOST=0.916;BRSQ=0.237;LDAF=0.1104;AVGPOST=0.8399;RSQ=0.3599;ERATE=0.0167;THETA=0.0011;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 25097330 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5376;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25097391 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7007;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25097392 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5574;AVGPOST=0.9972;RSQ=0.9955;ERATE=0.0005;THETA=0.0005;AC=1218;AN=2184 GT:DS:GL:BD 0.55769229 1
1 25097565 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6443;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25097598 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8869;ERATE=0.0005;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25097660 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8161;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25097712 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7417;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25097773 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5448;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25097871 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25097879 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0229;AVGPOST=0.9995;RSQ=0.9912;ERATE=0.0003;THETA=0.0006;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 25097930 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5223;ERATE=0.0006;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25098043 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0242;AVGPOST=0.9981;RSQ=0.9690;ERATE=0.0004;THETA=0.0005;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 25098086 . G GT 1859 PASS INDEL;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0206;AVGPOST=0.9982;RSQ=0.9603;ERATE=0.0004;THETA=0.0007;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 25098128 . TG T 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.743;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4867;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25098206 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9117;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25098216 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25098245 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5837;AVGPOST=0.9982;RSQ=0.9973;ERATE=0.0003;THETA=0.0006;AC=1276;AN=2184 GT:DS:GL:BD 0.58424908 1
1 25098335 rs77984282 CA C 2011 PASS INDEL;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0286;AVGPOST=0.9978;RSQ=0.9667;ERATE=0.0004;THETA=0.0005;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 25098341 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5839;AVGPOST=0.9984;RSQ=0.9974;ERATE=0.0003;THETA=0.0005;AC=1276;AN=2184 GT:DS:GL:BD 0.58424908 1
1 25098445 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7402;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25098461 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0026;AVGPOST=0.9985;RSQ=0.7469;ERATE=0.0006;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25098524 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0035;AVGPOST=0.9992;RSQ=0.8928;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25098638 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6620;ERATE=0.0004;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25098733 . ATTC A 195 PASS INDEL;BAVGPOST=0.999;BRSQ=0.728;LDAF=0.0023;AVGPOST=0.9973;RSQ=0.5441;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25098745 . CT C 18 PASS INDEL;BAVGPOST=0.982;BRSQ=0.423;LDAF=0.0348;AVGPOST=0.9473;RSQ=0.3818;ERATE=0.0105;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 25098819 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25099040 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0020;AVGPOST=0.9978;RSQ=0.5664;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25099062 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0043;AVGPOST=0.9984;RSQ=0.8503;ERATE=0.0005;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25099126 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.669;LDAF=0.0190;AVGPOST=0.9837;RSQ=0.6672;ERATE=0.0005;THETA=0.0011;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 25099405 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4990;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25099438 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.6350;AVGPOST=0.9941;RSQ=0.9892;ERATE=0.0008;THETA=0.0021;AC=1387;AN=2184 GT:DS:GL:BD 0.63507324 1
1 25099631 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6336;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25099902 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4853;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25099957 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.896;LDAF=0.0041;AVGPOST=0.9982;RSQ=0.8123;ERATE=0.0006;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25100159 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5372;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25100399 . CT C 64 PASS INDEL;BAVGPOST=0.994;BRSQ=0.448;LDAF=0.0093;AVGPOST=0.9868;RSQ=0.4383;ERATE=0.0034;THETA=0.0015;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25100505 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.739;LDAF=0.0044;AVGPOST=0.9992;RSQ=0.9182;ERATE=0.0004;THETA=0.0013;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25100588 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9957;RSQ=0.6432;ERATE=0.0007;THETA=0.0015;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25100616 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.828;LDAF=0.0307;AVGPOST=0.9859;RSQ=0.8190;ERATE=0.0006;THETA=0.0018;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 25100667 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.670;LDAF=0.0024;AVGPOST=0.9974;RSQ=0.5487;ERATE=0.0006;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25101031 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6181;ERATE=0.0003;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25101041 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.723;LDAF=0.0019;AVGPOST=0.9969;RSQ=0.3699;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25101117 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0018;AVGPOST=0.9976;RSQ=0.5184;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25101214 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0051;AVGPOST=0.9997;RSQ=0.9701;ERATE=0.0003;THETA=0.0010;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25101257 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25101269 . G GA 53 PASS INDEL;BAVGPOST=0.983;BRSQ=0.539;LDAF=0.0296;AVGPOST=0.9637;RSQ=0.5035;ERATE=0.0067;THETA=0.0009;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 25101339 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.850;LDAF=0.0138;AVGPOST=0.9943;RSQ=0.8394;ERATE=0.0004;THETA=0.0009;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 25101588 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.868;LDAF=0.0079;AVGPOST=0.9984;RSQ=0.9152;ERATE=0.0003;THETA=0.0011;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 25101625 . ACAGT A 93 PASS INDEL;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.3433;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25101637 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.4572;ERATE=0.0005;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25101702 . CCTTT C 1221 PASS INDEL;BAVGPOST=0.951;BRSQ=0.359;LDAF=0.0516;AVGPOST=0.9368;RSQ=0.4934;ERATE=0.0027;THETA=0.0008;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 25101718 . T TC 307 PASS INDEL;BAVGPOST=0.984;BRSQ=0.511;LDAF=0.0160;AVGPOST=0.9818;RSQ=0.5642;ERATE=0.0012;THETA=0.0012;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 25101910 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.570;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5516;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25101919 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6894;ERATE=0.0003;THETA=0.0031;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25102023 . CTT C 903 PASS INDEL;BAVGPOST=0.997;BRSQ=0.842;LDAF=0.0115;AVGPOST=0.9952;RSQ=0.8554;ERATE=0.0004;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 25102038 . TTTCTC T 406 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.8875;ERATE=0.0005;THETA=0.0012;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25102061 . CTCTTT C 285 PASS INDEL;BAVGPOST=0.998;BRSQ=0.867;LDAF=0.0074;AVGPOST=0.9952;RSQ=0.6953;ERATE=0.0019;THETA=0.0011;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25102260 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0245;AVGPOST=0.9992;RSQ=0.9850;ERATE=0.0003;THETA=0.0005;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 25102299 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.670;LDAF=0.0029;AVGPOST=0.9983;RSQ=0.7580;ERATE=0.0004;THETA=0.0021;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25102358 . TTTC T 27 PASS INDEL;BAVGPOST=1.000;BRSQ=0.716;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4150;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25102573 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25102613 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6552;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25102622 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25102662 . TTC T 104 PASS INDEL;BAVGPOST=0.992;BRSQ=0.606;LDAF=0.0169;AVGPOST=0.9814;RSQ=0.5606;ERATE=0.0055;THETA=0.0010;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 25102732 . G GT 101 PASS INDEL;BAVGPOST=1.000;BRSQ=0.761;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4454;ERATE=0.0005;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25102832 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7111;ERATE=0.0004;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25102852 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5888;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25103387 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6237;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25103412 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.800;LDAF=0.0469;AVGPOST=0.9605;RSQ=0.7032;ERATE=0.0103;THETA=0.0018;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 25103502 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8313;ERATE=0.0003;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25103603 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0165;AVGPOST=0.9989;RSQ=0.9763;ERATE=0.0004;THETA=0.0005;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 25103607 . A ATG 693 PASS INDEL;BAVGPOST=0.998;BRSQ=0.830;LDAF=0.0043;AVGPOST=0.9981;RSQ=0.8248;ERATE=0.0004;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25103721 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.6905;ERATE=0.0012;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25103765 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.624;LDAF=0.0016;AVGPOST=0.9988;RSQ=0.6867;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25104021 . C CA 88 PASS INDEL;BAVGPOST=0.990;BRSQ=0.373;LDAF=0.0161;AVGPOST=0.9786;RSQ=0.4671;ERATE=0.0063;THETA=0.0010;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 25104083 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5021;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25104092 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.766;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8187;ERATE=0.0003;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25104148 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0244;AVGPOST=0.9995;RSQ=0.9907;ERATE=0.0003;THETA=0.0005;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 25104167 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0023;AVGPOST=0.9981;RSQ=0.6862;ERATE=0.0010;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25104193 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6714;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25104632 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0034;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25104851 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.813;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9149;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25104887 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9562;ERATE=0.0003;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25104935 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0031;AVGPOST=0.9978;RSQ=0.7171;ERATE=0.0006;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25104938 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25104975 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.855;LDAF=0.0078;AVGPOST=0.9969;RSQ=0.8444;ERATE=0.0004;THETA=0.0011;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 25105013 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0036;AVGPOST=0.9983;RSQ=0.8240;ERATE=0.0004;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25105092 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.900;LDAF=0.0165;AVGPOST=0.9971;RSQ=0.9253;ERATE=0.0005;THETA=0.0009;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 25105133 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8178;ERATE=0.0004;THETA=0.0100;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25105141 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6918;ERATE=0.0005;THETA=0.0022;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25105176 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.6026;ERATE=0.0004;THETA=0.0018;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25105256 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0277;AVGPOST=0.9994;RSQ=0.9899;ERATE=0.0003;THETA=0.0015;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 25105257 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7946;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25105271 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4821;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25105276 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8519;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25105329 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7566;ERATE=0.0003;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25105448 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.857;LDAF=0.0248;AVGPOST=0.9947;RSQ=0.9098;ERATE=0.0005;THETA=0.0006;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 25105477 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.731;LDAF=0.0025;AVGPOST=0.9968;RSQ=0.5634;ERATE=0.0005;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25105519 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5922;ERATE=0.0005;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25105528 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5869;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25105601 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9280;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25105707 . TC T 64 PASS INDEL;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0023;AVGPOST=0.9976;RSQ=0.5509;ERATE=0.0007;THETA=0.0014;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25105754 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0030;AVGPOST=0.9985;RSQ=0.7787;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25105910 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.8648;ERATE=0.0004;THETA=0.0012;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25105927 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5797;ERATE=0.0003;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25105954 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25106231 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25106255 . C CG 218 PASS INDEL;BAVGPOST=1.000;BRSQ=0.737;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0004;THETA=0.0036;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25106258 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7021;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25106376 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.914;LDAF=0.0084;AVGPOST=0.9991;RSQ=0.9565;ERATE=0.0003;THETA=0.0015;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 25106470 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7425;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25106561 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0079;AVGPOST=0.9997;RSQ=0.9823;ERATE=0.0003;THETA=0.0017;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 25106609 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8303;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25106614 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8476;ERATE=0.0003;THETA=0.0029;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25106629 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25106664 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0015;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25106692 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25106733 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9652;ERATE=0.0003;THETA=0.0014;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25106773 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.880;LDAF=0.0057;AVGPOST=0.9965;RSQ=0.7503;ERATE=0.0024;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25106776 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0003;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25106797 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25106805 . T TC 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5369;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25106949 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7578;ERATE=0.0003;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25106997 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.8756;ERATE=0.0007;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25107240 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0243;AVGPOST=0.9998;RSQ=0.9956;ERATE=0.0003;THETA=0.0030;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 25107241 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8057;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25107278 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.743;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25107311 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0499;AVGPOST=0.9988;RSQ=0.9926;ERATE=0.0003;THETA=0.0013;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 25107388 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6129;ERATE=0.0005;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25107433 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25107447 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.526;LDAF=0.0048;AVGPOST=0.9923;RSQ=0.4189;ERATE=0.0004;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25107623 . GA G 208 PASS INDEL;BAVGPOST=0.984;BRSQ=0.515;LDAF=0.0257;AVGPOST=0.9666;RSQ=0.5005;ERATE=0.0043;THETA=0.0044;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 25107701 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.774;LDAF=0.0030;AVGPOST=0.9965;RSQ=0.5730;ERATE=0.0007;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25107800 rs68130120 A AT 9634 PASS INDEL;BAVGPOST=0.809;BRSQ=0.645;LDAF=0.4841;AVGPOST=0.7251;RSQ=0.5481;ERATE=0.0349;THETA=0.0011;AC=1080;AN=2184 GT:DS:GL:BD 0.49450549 0
1 25107816 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.533;LDAF=0.0092;AVGPOST=0.9910;RSQ=0.5804;ERATE=0.0016;THETA=0.0012;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 25107837 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.928;LDAF=0.0245;AVGPOST=0.9991;RSQ=0.9835;ERATE=0.0004;THETA=0.0014;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 25107925 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6334;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25107978 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25108075 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.660;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7577;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25108137 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6401;ERATE=0.0006;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25108227 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.766;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25108293 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0052;AVGPOST=0.9994;RSQ=0.9432;ERATE=0.0004;THETA=0.0018;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25108315 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0248;AVGPOST=0.9984;RSQ=0.9721;ERATE=0.0004;THETA=0.0008;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 25108349 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.701;LDAF=0.0538;AVGPOST=0.9584;RSQ=0.6868;ERATE=0.0117;THETA=0.0014;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 25108361 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.762;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7379;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25108432 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.755;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4848;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25108524 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7530;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25108548 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.835;LDAF=0.0038;AVGPOST=0.9981;RSQ=0.8084;ERATE=0.0005;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25108597 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7290;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25109136 . T TA 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7165;ERATE=0.0006;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25109208 . G GCT 82 PASS INDEL;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.5304;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25109230 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.816;LDAF=0.0034;AVGPOST=0.9978;RSQ=0.7528;ERATE=0.0004;THETA=0.0021;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25109235 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9987;RSQ=0.8320;ERATE=0.0004;THETA=0.0014;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25109420 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5563;ERATE=0.0004;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25109556 . A AT 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25109668 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0157;AVGPOST=0.9991;RSQ=0.9772;ERATE=0.0003;THETA=0.0012;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 25109869 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0039;AVGPOST=0.9973;RSQ=0.7406;ERATE=0.0009;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25110021 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7563;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25110038 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0355;AVGPOST=0.9973;RSQ=0.9712;ERATE=0.0004;THETA=0.0007;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 25110061 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.688;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6991;ERATE=0.0004;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25110126 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0072;AVGPOST=0.9975;RSQ=0.8830;ERATE=0.0005;THETA=0.0015;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 25110181 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.6890;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25110194 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7113;ERATE=0.0005;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25110313 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0032;AVGPOST=0.9983;RSQ=0.7834;ERATE=0.0006;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25110568 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0226;AVGPOST=0.9997;RSQ=0.9946;ERATE=0.0004;THETA=0.0016;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 25110747 rs5773104 C CCT 3815 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0141;AVGPOST=0.9984;RSQ=0.9627;ERATE=0.0004;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 25111030 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25111040 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0494;AVGPOST=0.9999;RSQ=0.9992;ERATE=0.0003;THETA=0.0007;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 25111324 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0250;AVGPOST=0.9985;RSQ=0.9737;ERATE=0.0005;THETA=0.0008;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 25111558 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.698;LDAF=0.0023;AVGPOST=0.9987;RSQ=0.7418;ERATE=0.0006;THETA=0.0016;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25111572 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4429;ERATE=0.0005;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25112076 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.829;LDAF=0.0046;AVGPOST=0.9976;RSQ=0.7773;ERATE=0.0004;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25112083 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.623;LDAF=0.0100;AVGPOST=0.9893;RSQ=0.5518;ERATE=0.0017;THETA=0.0010;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 25112121 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.563;LDAF=0.0081;AVGPOST=0.9927;RSQ=0.5948;ERATE=0.0009;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 25112171 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.943;LDAF=0.2125;AVGPOST=0.9649;RSQ=0.9194;ERATE=0.0009;THETA=0.0008;AC=473;AN=2184 GT:DS:GL:BD 0.21657509 0
1 25112232 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4509;ERATE=0.0007;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25112244 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.517;LDAF=0.0023;AVGPOST=0.9981;RSQ=0.6405;ERATE=0.0004;THETA=0.0018;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25112300 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0023;AVGPOST=0.9973;RSQ=0.5185;ERATE=0.0005;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25112374 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0053;AVGPOST=0.9988;RSQ=0.8985;ERATE=0.0004;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25112429 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0492;AVGPOST=0.9995;RSQ=0.9958;ERATE=0.0004;THETA=0.0007;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 25112488 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0244;AVGPOST=0.9996;RSQ=0.9932;ERATE=0.0004;THETA=0.0011;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 25112594 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0037;AVGPOST=0.9971;RSQ=0.6953;ERATE=0.0005;THETA=0.0018;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25112808 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6695;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25112941 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0045;AVGPOST=0.9986;RSQ=0.8855;ERATE=0.0003;THETA=0.0031;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25112976 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.663;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6582;ERATE=0.0005;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25113111 . A AT 260 PASS INDEL;BAVGPOST=0.995;BRSQ=0.595;LDAF=0.0157;AVGPOST=0.9792;RSQ=0.4445;ERATE=0.0033;THETA=0.0015;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 25113160 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.707;LDAF=0.0040;AVGPOST=0.9955;RSQ=0.5962;ERATE=0.0006;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25113311 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.869;LDAF=0.0222;AVGPOST=0.9958;RSQ=0.9278;ERATE=0.0004;THETA=0.0011;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 25113352 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.953;LDAF=0.0332;AVGPOST=0.9892;RSQ=0.8622;ERATE=0.0014;THETA=0.0003;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 25113396 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.814;LDAF=0.0175;AVGPOST=0.9957;RSQ=0.9074;ERATE=0.0004;THETA=0.0008;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 25113398 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.664;LDAF=0.0140;AVGPOST=0.9874;RSQ=0.6230;ERATE=0.0006;THETA=0.0009;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 25113400 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.903;LDAF=0.0187;AVGPOST=0.9931;RSQ=0.8629;ERATE=0.0008;THETA=0.0010;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 25113404 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.915;LDAF=0.0178;AVGPOST=0.9937;RSQ=0.8683;ERATE=0.0006;THETA=0.0007;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 25113487 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3655;AVGPOST=0.9882;RSQ=0.9793;ERATE=0.0011;THETA=0.0007;AC=801;AN=2184 GT:DS:GL:BD 0.36675823 0
1 25113502 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6521;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25114036 . C CT 64 PASS INDEL;BAVGPOST=0.983;BRSQ=0.538;LDAF=0.0370;AVGPOST=0.9502;RSQ=0.4581;ERATE=0.0085;THETA=0.0005;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 25114050 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.678;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4347;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25114051 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0054;AVGPOST=0.9969;RSQ=0.7882;ERATE=0.0006;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25114090 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.530;LDAF=0.0162;AVGPOST=0.9816;RSQ=0.5324;ERATE=0.0043;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 25114091 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0028;AVGPOST=0.9987;RSQ=0.7873;ERATE=0.0004;THETA=0.0042;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25114193 . A AT 378 PASS INDEL;BAVGPOST=0.856;BRSQ=0.273;LDAF=0.1734;AVGPOST=0.7648;RSQ=0.3044;ERATE=0.0391;THETA=0.0005;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 25114200 . T TC 450 PASS INDEL;BAVGPOST=0.991;BRSQ=0.563;LDAF=0.0108;AVGPOST=0.9918;RSQ=0.6912;ERATE=0.0005;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 25114211 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.433;LDAF=0.0034;AVGPOST=0.9959;RSQ=0.5113;ERATE=0.0010;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25114230 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.962;LDAF=0.3579;AVGPOST=0.9697;RSQ=0.9460;ERATE=0.0037;THETA=0.0011;AC=785;AN=2184 GT:DS:GL:BD 0.35943222 0
1 25114237 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.467;LDAF=0.0112;AVGPOST=0.9847;RSQ=0.4646;ERATE=0.0024;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 25114493 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0055;AVGPOST=0.9986;RSQ=0.8858;ERATE=0.0005;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25114584 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.938;LDAF=0.0229;AVGPOST=0.9967;RSQ=0.9462;ERATE=0.0005;THETA=0.0005;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 25114674 . TC T 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5103;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25114675 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.813;LDAF=0.0035;AVGPOST=0.9982;RSQ=0.8236;ERATE=0.0004;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25114701 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0023;AVGPOST=0.9981;RSQ=0.6337;ERATE=0.0006;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25114772 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.711;LDAF=0.0022;AVGPOST=0.9976;RSQ=0.5692;ERATE=0.0009;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25114961 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.819;LDAF=0.0054;AVGPOST=0.9991;RSQ=0.9227;ERATE=0.0004;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25114974 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6409;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25115006 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0010;AVGPOST=0.9987;RSQ=0.5072;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25115079 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0370;AVGPOST=0.9986;RSQ=0.9872;ERATE=0.0004;THETA=0.0009;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 25115107 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.693;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4709;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25115341 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7162;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25115537 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5110;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25115654 . T TG 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7556;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25115761 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0018;AVGPOST=0.9977;RSQ=0.4518;ERATE=0.0006;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25115764 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.762;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5324;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25116021 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5062;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25116094 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5548;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25116231 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0017;AVGPOST=0.9979;RSQ=0.4807;ERATE=0.0006;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25116554 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25116594 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0035;AVGPOST=0.9976;RSQ=0.7528;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25116601 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0136;AVGPOST=0.9984;RSQ=0.9469;ERATE=0.0004;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 25116655 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.704;LDAF=0.0017;AVGPOST=0.9988;RSQ=0.6694;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25116728 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.9929;AVGPOST=0.9938;RSQ=0.6443;ERATE=0.0006;THETA=0.0015;AC=2174;AN=2184 GT:DS:GL:BD 0.99542123 1
1 25116751 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.700;LDAF=0.0049;AVGPOST=0.9920;RSQ=0.3413;ERATE=0.0018;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25116917 . AAAAT A 176 PASS INDEL;BAVGPOST=1.000;BRSQ=0.756;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4128;ERATE=0.0005;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25116981 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25117303 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25117530 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.695;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4861;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25117671 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4008;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25117705 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8810;ERATE=0.0004;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25117749 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.961;LDAF=0.0322;AVGPOST=0.9965;RSQ=0.9611;ERATE=0.0005;THETA=0.0009;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 25117899 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6328;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25117985 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4818;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25118137 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.698;LDAF=0.0034;AVGPOST=0.9952;RSQ=0.3756;ERATE=0.0010;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25118141 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.704;LDAF=0.0041;AVGPOST=0.9943;RSQ=0.4149;ERATE=0.0011;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25118195 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4596;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25118279 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4431;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25118371 rs112152589 A AAAAT 1728 PASS INDEL;BAVGPOST=0.993;BRSQ=0.767;LDAF=0.0207;AVGPOST=0.9899;RSQ=0.8238;ERATE=0.0010;THETA=0.0006;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 25118383 . T TAAAC 783 PASS INDEL;BAVGPOST=0.994;BRSQ=0.782;LDAF=0.0177;AVGPOST=0.9925;RSQ=0.8600;ERATE=0.0007;THETA=0.0007;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 25118432 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0054;AVGPOST=0.9984;RSQ=0.8626;ERATE=0.0005;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25118651 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0013;AVGPOST=0.9980;RSQ=0.4043;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25118834 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7158;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25118844 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4251;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25118883 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.784;LDAF=0.0075;AVGPOST=0.9936;RSQ=0.6449;ERATE=0.0005;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25118976 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0023;AVGPOST=0.9979;RSQ=0.5913;ERATE=0.0014;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25119092 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8515;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25119143 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0017;AVGPOST=0.9981;RSQ=0.5458;ERATE=0.0004;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25119216 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0049;AVGPOST=0.9990;RSQ=0.9119;ERATE=0.0003;THETA=0.0021;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25119259 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7604;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25119355 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0144;AVGPOST=0.9993;RSQ=0.9784;ERATE=0.0004;THETA=0.0008;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 25119519 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25119644 . CTGT C 14934 PASS INDEL;BAVGPOST=0.981;BRSQ=0.965;LDAF=0.3217;AVGPOST=0.9498;RSQ=0.9125;ERATE=0.0062;THETA=0.0005;AC=685;AN=2184 GT:DS:GL:BD 0.31364468 0
1 25119747 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0061;AVGPOST=0.9983;RSQ=0.8874;ERATE=0.0004;THETA=0.0011;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 25119765 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25119803 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7976;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25119831 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25119870 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5281;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25119978 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6619;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25120085 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0032;AVGPOST=0.9971;RSQ=0.6116;ERATE=0.0014;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25120221 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.760;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4900;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25120279 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6065;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25120794 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0046;AVGPOST=0.9990;RSQ=0.9099;ERATE=0.0005;THETA=0.0014;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25120802 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9996;RSQ=0.9392;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25120803 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25120845 . T TTG 10860 PASS INDEL;BAVGPOST=0.973;BRSQ=0.944;LDAF=0.2204;AVGPOST=0.9808;RSQ=0.9588;ERATE=0.0004;THETA=0.0005;AC=485;AN=2184 GT:DS:GL:BD 0.22206959 0
1 25120846 . T TG 21036 PASS INDEL;BAVGPOST=0.973;BRSQ=0.944;LDAF=0.2207;AVGPOST=0.9813;RSQ=0.9602;ERATE=0.0005;THETA=0.0006;AC=485;AN=2184 GT:DS:GL:BD 0.22206959 0
1 25120973 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.833;LDAF=0.0176;AVGPOST=0.9904;RSQ=0.7700;ERATE=0.0013;THETA=0.0002;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 25121005 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.781;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7610;ERATE=0.0006;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25121031 . TTTA T 303 PASS INDEL;BAVGPOST=0.999;BRSQ=0.854;LDAF=0.0027;AVGPOST=0.9983;RSQ=0.7368;ERATE=0.0007;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25121034 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.7913;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25121217 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0275;AVGPOST=0.9997;RSQ=0.9946;ERATE=0.0003;THETA=0.0006;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 25121266 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0206;AVGPOST=0.9999;RSQ=0.9979;ERATE=0.0003;THETA=0.0009;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 25121785 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0010;AVGPOST=0.9986;RSQ=0.4299;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25121874 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5845;AVGPOST=0.9945;RSQ=0.9910;ERATE=0.0007;THETA=0.0004;AC=1277;AN=2184 GT:DS:GL:BD 0.58470696 1
1 25121916 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25121935 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0215;AVGPOST=0.9979;RSQ=0.9613;ERATE=0.0005;THETA=0.0010;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 25121974 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8681;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25122040 . T TA 588 PASS INDEL;BAVGPOST=0.977;BRSQ=0.631;LDAF=0.0487;AVGPOST=0.9507;RSQ=0.5775;ERATE=0.0122;THETA=0.0004;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 25122050 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0041;AVGPOST=0.9959;RSQ=0.5897;ERATE=0.0007;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25122088 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0242;AVGPOST=0.9996;RSQ=0.9930;ERATE=0.0003;THETA=0.0003;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 25122124 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.724;LDAF=0.0041;AVGPOST=0.9959;RSQ=0.6713;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25122162 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.5793;AVGPOST=0.9866;RSQ=0.9786;ERATE=0.0012;THETA=0.0006;AC=1274;AN=2184 GT:DS:GL:BD 0.58333331 1
1 25122186 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.706;LDAF=0.0031;AVGPOST=0.9966;RSQ=0.5278;ERATE=0.0018;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25122187 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0245;AVGPOST=0.9990;RSQ=0.9821;ERATE=0.0005;THETA=0.0016;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 25122341 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9981;AVGPOST=0.9964;RSQ=0.1964;ERATE=0.0006;THETA=0.0010;AC=2183;AN=2184 GT:DS:GL:BD 0.99954212 1
1 25122435 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0058;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25122514 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5916;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25122514 . C CAAGG 248 PASS INDEL;BAVGPOST=0.999;BRSQ=0.738;LDAF=0.0025;AVGPOST=0.9967;RSQ=0.4417;ERATE=0.0007;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25122534 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6426;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25122535 . G GGAATTAC 1090 PASS INDEL;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.7923;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25122653 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0059;AVGPOST=0.9980;RSQ=0.8536;ERATE=0.0004;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25122826 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0023;AVGPOST=0.9985;RSQ=0.7696;ERATE=0.0004;THETA=0.0057;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25122827 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0164;AVGPOST=0.9979;RSQ=0.9467;ERATE=0.0004;THETA=0.0007;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 25122836 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5446;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25122837 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.767;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.3905;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25122839 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.5860;AVGPOST=0.9935;RSQ=0.9885;ERATE=0.0015;THETA=0.0006;AC=1281;AN=2184 GT:DS:GL:BD 0.58653843 1
1 25122991 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9375;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25122999 . AC A 1657 PASS INDEL;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0140;AVGPOST=0.9993;RSQ=0.9796;ERATE=0.0003;THETA=0.0007;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 25123001 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0242;AVGPOST=0.9998;RSQ=0.9956;ERATE=0.0003;THETA=0.0005;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 25123003 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25123074 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0041;AVGPOST=0.9963;RSQ=0.6316;ERATE=0.0021;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25123111 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.728;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6294;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25123257 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.780;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6552;ERATE=0.0008;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25123284 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9258;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25123314 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.782;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4237;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25123407 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.6458;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25123450 . TA T 3161 PASS INDEL;BAVGPOST=0.933;BRSQ=0.783;LDAF=0.1521;AVGPOST=0.9383;RSQ=0.8269;ERATE=0.0036;THETA=0.0005;AC=304;AN=2184 GT:DS:GL:BD 0.13919415 0
1 25123451 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.933;BRSQ=0.782;LDAF=0.1678;AVGPOST=0.9205;RSQ=0.7819;ERATE=0.0125;THETA=0.0009;AC=316;AN=2184 GT:DS:GL:BD 0.14468865 0
1 25123451 . A AT 393 PASS INDEL;BAVGPOST=0.930;BRSQ=0.380;LDAF=0.1118;AVGPOST=0.8512;RSQ=0.3750;ERATE=0.0232;THETA=0.0006;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 25123455 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.781;LDAF=0.0430;AVGPOST=0.9731;RSQ=0.7570;ERATE=0.0056;THETA=0.0008;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 25123602 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0267;AVGPOST=0.9964;RSQ=0.9479;ERATE=0.0006;THETA=0.0004;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 25123779 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6160;ERATE=0.0008;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25123844 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.615;LDAF=0.0042;AVGPOST=0.9979;RSQ=0.7708;ERATE=0.0005;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25123922 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.851;LDAF=0.0031;AVGPOST=0.9987;RSQ=0.8172;ERATE=0.0006;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25123967 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9998;RSQ=0.9618;ERATE=0.0003;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25123990 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5552;AVGPOST=0.9963;RSQ=0.9939;ERATE=0.0004;THETA=0.0003;AC=1214;AN=2184 GT:DS:GL:BD 0.55586082 1
1 25124188 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25124249 . A AG 23 PASS INDEL;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5552;ERATE=0.0005;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25124303 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 25124366 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0012;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25124384 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25124449 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25124485 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0008;AVGPOST=0.9998;RSQ=0.8927;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25124668 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25124693 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0184;AVGPOST=0.9997;RSQ=0.9932;ERATE=0.0003;THETA=0.0002;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 25124937 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5756;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25124988 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0035;AVGPOST=0.9983;RSQ=0.8051;ERATE=0.0008;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25125051 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.971;LDAF=0.0273;AVGPOST=0.9979;RSQ=0.9648;ERATE=0.0004;THETA=0.0005;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 25125119 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.756;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4881;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25125122 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.871;LDAF=0.9787;AVGPOST=0.9897;RSQ=0.8300;ERATE=0.0008;THETA=0.0006;AC=2145;AN=2184 GT:DS:GL:BD 0.98214287 1
1 25125159 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.678;LDAF=0.0037;AVGPOST=0.9972;RSQ=0.7047;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25125162 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.956;LDAF=0.3569;AVGPOST=0.9801;RSQ=0.9658;ERATE=0.0042;THETA=0.0040;AC=783;AN=2184 GT:DS:GL:BD 0.35851648 0
1 25125507 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.528;LDAF=0.0069;AVGPOST=0.9903;RSQ=0.4460;ERATE=0.0007;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25125595 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.630;BRSQ=0.226;LDAF=0.6694;AVGPOST=0.6535;RSQ=0.3469;ERATE=0.0546;THETA=0.0005;AC=1617;AN=2184 GT:DS:GL:BD 0.74038464 1
1 25125664 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.874;BRSQ=0.441;LDAF=0.8138;AVGPOST=0.7739;RSQ=0.3880;ERATE=0.0297;THETA=0.0007;AC=1945;AN=2184 GT:DS:GL:BD 0.89056778 1
1 25125708 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.342;LDAF=0.0331;AVGPOST=0.9658;RSQ=0.6091;ERATE=0.0010;THETA=0.0008;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 25125711 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.887;LDAF=0.9462;AVGPOST=0.9778;RSQ=0.8474;ERATE=0.0018;THETA=0.0009;AC=2084;AN=2184 GT:DS:GL:BD 0.95421243 1
1 25125720 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.729;LDAF=0.0153;AVGPOST=0.9901;RSQ=0.7146;ERATE=0.0009;THETA=0.0010;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 25125791 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.513;LDAF=0.0193;AVGPOST=0.9804;RSQ=0.6447;ERATE=0.0010;THETA=0.0010;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 25125854 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.642;LDAF=0.0149;AVGPOST=0.9803;RSQ=0.4461;ERATE=0.0014;THETA=0.0009;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 25125864 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.719;LDAF=0.0231;AVGPOST=0.9800;RSQ=0.6439;ERATE=0.0012;THETA=0.0010;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 25125898 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.863;BRSQ=0.751;LDAF=0.5075;AVGPOST=0.8147;RSQ=0.7030;ERATE=0.0270;THETA=0.0006;AC=1137;AN=2184 GT:DS:GL:BD 0.52060437 1
1 25126060 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.804;BRSQ=0.533;LDAF=0.3118;AVGPOST=0.7647;RSQ=0.5274;ERATE=0.0286;THETA=0.0059;AC=639;AN=2184 GT:DS:GL:BD 0.29258242 0
1 25126063 . GC G 108 PASS INDEL;BAVGPOST=0.922;BRSQ=0.143;LDAF=0.0818;AVGPOST=0.8880;RSQ=0.4168;ERATE=0.0052;THETA=0.0041;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 25126070 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.904;BRSQ=0.182;LDAF=0.1080;AVGPOST=0.8647;RSQ=0.4422;ERATE=0.0071;THETA=0.0017;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 25126077 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.795;BRSQ=0.617;LDAF=0.5582;AVGPOST=0.8468;RSQ=0.7516;ERATE=0.0095;THETA=0.0003;AC=1253;AN=2184 GT:DS:GL:BD 0.57371795 1
1 25127383 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.885;BRSQ=0.439;LDAF=0.1456;AVGPOST=0.8298;RSQ=0.4704;ERATE=0.0254;THETA=0.0017;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 25127406 rs113865739 G GAC 2188 PASS INDEL;BAVGPOST=0.435;BRSQ=0.068;LDAF=0.7083;AVGPOST=0.6902;RSQ=0.4067;ERATE=0.0133;THETA=0.0011;AC=1697;AN=2184 GT:DS:GL:BD 0.77701467 1
1 25127411 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.912;BRSQ=0.254;LDAF=0.0753;AVGPOST=0.9093;RSQ=0.4840;ERATE=0.0043;THETA=0.0004;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 25127602 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.9954;AVGPOST=0.9988;RSQ=0.8849;ERATE=0.0004;THETA=0.0004;AC=2175;AN=2184 GT:DS:GL:BD 0.99587911 1
1 25127613 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5826;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25127616 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0024;AVGPOST=0.9991;RSQ=0.8465;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25127807 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7871;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25127839 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4507;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25128031 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.869;LDAF=0.0114;AVGPOST=0.9967;RSQ=0.8890;ERATE=0.0005;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 25128123 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9776;AVGPOST=1.0000;RSQ=0.9992;ERATE=0.0003;THETA=0.0008;AC=2135;AN=2184 GT:DS:GL:BD 0.97756410 1
1 25128413 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9776;AVGPOST=0.9998;RSQ=0.9969;ERATE=0.0003;THETA=0.0007;AC=2135;AN=2184 GT:DS:GL:BD 0.97756410 1
1 25128471 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.745;LDAF=0.0039;AVGPOST=0.9958;RSQ=0.5669;ERATE=0.0016;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25128588 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7148;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25128592 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0208;AVGPOST=0.9975;RSQ=0.9581;ERATE=0.0004;THETA=0.0006;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 25128694 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25128740 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0242;AVGPOST=0.9996;RSQ=0.9924;ERATE=0.0004;THETA=0.0008;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 25128889 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6586;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25128976 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7899;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25129243 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.710;LDAF=0.0220;AVGPOST=0.9866;RSQ=0.7489;ERATE=0.0037;THETA=0.0025;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 25129337 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.962;BRSQ=0.902;LDAF=0.2210;AVGPOST=0.9801;RSQ=0.9564;ERATE=0.0009;THETA=0.0010;AC=487;AN=2184 GT:DS:GL:BD 0.22298534 0
1 25129478 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.787;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7660;ERATE=0.0004;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25129530 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.762;LDAF=0.0040;AVGPOST=0.9950;RSQ=0.5658;ERATE=0.0006;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25129597 . AAAAC A 307 PASS INDEL;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0024;AVGPOST=0.9972;RSQ=0.5816;ERATE=0.0006;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25129804 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5427;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25129858 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9506;AVGPOST=0.9998;RSQ=0.9984;ERATE=0.0003;THETA=0.0004;AC=2076;AN=2184 GT:DS:GL:BD 0.95054942 1
1 25130083 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5832;AVGPOST=0.9981;RSQ=0.9967;ERATE=0.0005;THETA=0.0009;AC=1274;AN=2184 GT:DS:GL:BD 0.58333331 1
1 25130149 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6530;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25130276 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25130519 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.663;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4883;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25130553 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.633;LDAF=0.0016;AVGPOST=0.9982;RSQ=0.5873;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25130692 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.5496;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25130783 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3672;AVGPOST=0.9979;RSQ=0.9960;ERATE=0.0004;THETA=0.0004;AC=802;AN=2184 GT:DS:GL:BD 0.36721611 0
1 25130924 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.280;LDAF=0.0353;AVGPOST=0.9648;RSQ=0.5619;ERATE=0.0020;THETA=0.0005;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 25130952 . TG T 17 PASS INDEL;BAVGPOST=0.975;BRSQ=0.035;LDAF=0.0673;AVGPOST=0.8971;RSQ=0.3534;ERATE=0.0019;THETA=0.0006;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 25131117 . CAGAG C 57 PASS INDEL;BAVGPOST=0.998;BRSQ=0.478;LDAF=0.0059;AVGPOST=0.9914;RSQ=0.3927;ERATE=0.0010;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25131261 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25131474 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8845;ERATE=0.0003;THETA=0.0020;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25131496 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.922;LDAF=0.0248;AVGPOST=0.9982;RSQ=0.9674;ERATE=0.0005;THETA=0.0009;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 25131534 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0255;AVGPOST=0.9972;RSQ=0.9618;ERATE=0.0005;THETA=0.0009;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 25131634 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.609;LDAF=0.0019;AVGPOST=0.9993;RSQ=0.8237;ERATE=0.0004;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25131656 . A AT 87 PASS INDEL;BAVGPOST=0.996;BRSQ=0.581;LDAF=0.0086;AVGPOST=0.9901;RSQ=0.5134;ERATE=0.0022;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 25131694 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0038;AVGPOST=0.9990;RSQ=0.8890;ERATE=0.0004;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25131962 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.466;LDAF=0.0017;AVGPOST=0.9976;RSQ=0.4267;ERATE=0.0009;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25132059 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.739;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7949;ERATE=0.0005;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25132061 . A AT 483 PASS INDEL;BAVGPOST=0.986;BRSQ=0.591;LDAF=0.0238;AVGPOST=0.9733;RSQ=0.5388;ERATE=0.0064;THETA=0.0011;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 25132196 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.778;LDAF=0.0093;AVGPOST=0.9962;RSQ=0.8325;ERATE=0.0008;THETA=0.0022;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 25132202 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9999;AVGPOST=0.9997;RSQ=0.0497;ERATE=0.0003;THETA=0.0007;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 25132339 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.7263;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25132460 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4719;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25132464 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5940;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25132518 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5418;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25132569 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0018;AVGPOST=0.9986;RSQ=0.6602;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25132591 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.855;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9333;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25132885 . T TA 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8096;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25132958 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.9070;ERATE=0.0003;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25133002 . T TA 92 PASS INDEL;BAVGPOST=0.998;BRSQ=0.561;LDAF=0.0032;AVGPOST=0.9970;RSQ=0.6161;ERATE=0.0009;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25133068 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5051;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25133090 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7745;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25133122 . CTAAAT C 719 PASS INDEL;BAVGPOST=0.998;BRSQ=0.774;LDAF=0.0052;AVGPOST=0.9959;RSQ=0.6759;ERATE=0.0005;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25133141 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6112;ERATE=0.0004;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25133254 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.843;LDAF=0.0072;AVGPOST=0.9969;RSQ=0.8282;ERATE=0.0005;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 25133294 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7944;ERATE=0.0006;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25133389 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9303;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25133466 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6780;ERATE=0.0004;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25133523 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.749;LDAF=0.0035;AVGPOST=0.9970;RSQ=0.6457;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25133622 . T TA 57 PASS INDEL;BAVGPOST=0.994;BRSQ=0.380;LDAF=0.0118;AVGPOST=0.9828;RSQ=0.4105;ERATE=0.0036;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 25133668 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5757;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25133763 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0200;AVGPOST=0.9981;RSQ=0.9675;ERATE=0.0003;THETA=0.0010;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 25133811 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.805;LDAF=0.0030;AVGPOST=0.9967;RSQ=0.6082;ERATE=0.0012;THETA=0.0025;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25133893 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.777;LDAF=0.0219;AVGPOST=0.9927;RSQ=0.8669;ERATE=0.0007;THETA=0.0005;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 25133966 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.781;LDAF=0.0046;AVGPOST=0.9956;RSQ=0.6632;ERATE=0.0006;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25134012 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.883;LDAF=0.0089;AVGPOST=0.9972;RSQ=0.8806;ERATE=0.0004;THETA=0.0007;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 25134087 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25134633 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.767;LDAF=0.0202;AVGPOST=0.9911;RSQ=0.8390;ERATE=0.0005;THETA=0.0009;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 25134768 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.951;LDAF=0.0239;AVGPOST=0.9992;RSQ=0.9845;ERATE=0.0005;THETA=0.0007;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 25134820 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5756;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25134856 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25134972 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.673;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4989;ERATE=0.0005;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25134981 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.950;LDAF=0.0238;AVGPOST=0.9986;RSQ=0.9740;ERATE=0.0005;THETA=0.0005;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 25134982 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.970;LDAF=0.0387;AVGPOST=0.9950;RSQ=0.9534;ERATE=0.0005;THETA=0.0006;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 25134990 . ACCGCCC A 222 PASS INDEL;BAVGPOST=0.999;BRSQ=0.558;LDAF=0.0062;AVGPOST=0.9907;RSQ=0.4382;ERATE=0.0006;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25135004 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.986;LDAF=0.3744;AVGPOST=0.9755;RSQ=0.9598;ERATE=0.0037;THETA=0.0008;AC=806;AN=2184 GT:DS:GL:BD 0.36904761 0
1 25135045 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.565;LDAF=0.0101;AVGPOST=0.9877;RSQ=0.5791;ERATE=0.0005;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 25135142 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.852;LDAF=0.9665;AVGPOST=0.9874;RSQ=0.8733;ERATE=0.0016;THETA=0.0007;AC=2118;AN=2184 GT:DS:GL:BD 0.96978021 1
1 25135228 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.592;LDAF=0.0066;AVGPOST=0.9915;RSQ=0.4925;ERATE=0.0011;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25135237 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.483;LDAF=0.0022;AVGPOST=0.9964;RSQ=0.2725;ERATE=0.0009;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25135254 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.499;LDAF=0.0040;AVGPOST=0.9980;RSQ=0.8039;ERATE=0.0006;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25135260 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.617;LDAF=0.0051;AVGPOST=0.9959;RSQ=0.6730;ERATE=0.0006;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25135335 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0206;AVGPOST=0.9980;RSQ=0.9651;ERATE=0.0003;THETA=0.0005;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 25135373 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.593;LDAF=0.0028;AVGPOST=0.9963;RSQ=0.4329;ERATE=0.0011;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25135540 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.851;LDAF=0.0233;AVGPOST=0.9936;RSQ=0.9034;ERATE=0.0005;THETA=0.0016;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 25135668 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.902;LDAF=0.0132;AVGPOST=0.9985;RSQ=0.9508;ERATE=0.0005;THETA=0.0009;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 25135692 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0025;AVGPOST=0.9977;RSQ=0.6337;ERATE=0.0009;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25136047 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0025;AVGPOST=0.9967;RSQ=0.4527;ERATE=0.0009;THETA=0.0029;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25136095 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4489;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25136203 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.950;BRSQ=0.805;LDAF=0.1461;AVGPOST=0.9682;RSQ=0.9077;ERATE=0.0006;THETA=0.0007;AC=306;AN=2184 GT:DS:GL:BD 0.14010990 0
1 25136604 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0035;AVGPOST=0.9971;RSQ=0.6742;ERATE=0.0006;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25136713 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5842;AVGPOST=0.9944;RSQ=0.9909;ERATE=0.0009;THETA=0.0005;AC=1274;AN=2184 GT:DS:GL:BD 0.58333331 1
1 25136721 . T TTA 497 PASS INDEL;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0045;AVGPOST=0.9963;RSQ=0.6585;ERATE=0.0009;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25136837 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.742;LDAF=0.0030;AVGPOST=0.9971;RSQ=0.6471;ERATE=0.0005;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25137012 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6409;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25137076 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0237;AVGPOST=0.9993;RSQ=0.9871;ERATE=0.0004;THETA=0.0012;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 25137092 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.4982;ERATE=0.0005;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25137123 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0018;AVGPOST=0.9987;RSQ=0.7161;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25137133 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6107;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25137155 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25137219 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.825;LDAF=0.0027;AVGPOST=0.9977;RSQ=0.6407;ERATE=0.0009;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25137352 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.712;LDAF=0.0042;AVGPOST=0.9952;RSQ=0.5532;ERATE=0.0006;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25137459 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.522;LDAF=0.0053;AVGPOST=0.9945;RSQ=0.5551;ERATE=0.0014;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25137518 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.773;LDAF=0.0024;AVGPOST=0.9986;RSQ=0.7285;ERATE=0.0006;THETA=0.0019;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25137527 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.793;LDAF=0.0052;AVGPOST=0.9989;RSQ=0.9010;ERATE=0.0005;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25137667 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6683;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25137816 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6207;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25137906 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.857;LDAF=0.0093;AVGPOST=0.9972;RSQ=0.8810;ERATE=0.0003;THETA=0.0010;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 25137962 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.567;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6182;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25138015 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.943;BRSQ=0.735;LDAF=0.8909;AVGPOST=0.9277;RSQ=0.7255;ERATE=0.0252;THETA=0.0005;AC=1981;AN=2184 GT:DS:GL:BD 0.90705127 1
1 25138053 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0031;AVGPOST=0.9991;RSQ=0.8737;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25138068 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.970;LDAF=0.0376;AVGPOST=0.9978;RSQ=0.9760;ERATE=0.0004;THETA=0.0009;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 25138132 . T TA 3129 PASS INDEL;BAVGPOST=0.603;BRSQ=0.273;LDAF=0.6037;AVGPOST=0.6426;RSQ=0.3639;ERATE=0.0620;THETA=0.0006;AC=1432;AN=2184 GT:DS:GL:BD 0.65567768 1
1 25138141 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.939;BRSQ=0.679;LDAF=0.9182;AVGPOST=0.9632;RSQ=0.8267;ERATE=0.0019;THETA=0.0032;AC=2018;AN=2184 GT:DS:GL:BD 0.92399269 1
1 25138186 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7470;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25138312 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0093;AVGPOST=0.9995;RSQ=0.9720;ERATE=0.0003;THETA=0.0008;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 25138481 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4691;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25138631 . A AC 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5127;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25138679 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4513;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25138969 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.666;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6464;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25139099 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.640;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5614;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25139220 . C CT 312 PASS INDEL;BAVGPOST=0.994;BRSQ=0.668;LDAF=0.0122;AVGPOST=0.9879;RSQ=0.6010;ERATE=0.0024;THETA=0.0008;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 25139247 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.819;LDAF=0.0026;AVGPOST=0.9992;RSQ=0.8588;ERATE=0.0005;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25139256 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4434;ERATE=0.0005;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25139298 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4913;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25139536 rs58223120 TC T 47476 PASS INDEL;BAVGPOST=0.991;BRSQ=0.876;LDAF=0.9623;AVGPOST=0.9819;RSQ=0.8316;ERATE=0.0015;THETA=0.0014;AC=2113;AN=2184 GT:DS:GL:BD 0.96749085 1
1 25139583 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.728;LDAF=0.0042;AVGPOST=0.9979;RSQ=0.8110;ERATE=0.0005;THETA=0.0012;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25139651 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.5541;ERATE=0.0007;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25139654 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0033;AVGPOST=0.9960;RSQ=0.4999;ERATE=0.0013;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25139828 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.819;LDAF=0.0172;AVGPOST=0.9945;RSQ=0.8618;ERATE=0.0005;THETA=0.0008;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 25139872 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.9771;AVGPOST=0.9990;RSQ=0.9851;ERATE=0.0004;THETA=0.0009;AC=2135;AN=2184 GT:DS:GL:BD 0.97756410 1
1 25140056 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0223;AVGPOST=0.9941;RSQ=0.8971;ERATE=0.0005;THETA=0.0007;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 25140156 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.494;LDAF=0.0029;AVGPOST=0.9970;RSQ=0.5370;ERATE=0.0007;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25140157 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.572;LDAF=0.0057;AVGPOST=0.9962;RSQ=0.7389;ERATE=0.0004;THETA=0.0032;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25140249 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.963;LDAF=0.5566;AVGPOST=0.9969;RSQ=0.9952;ERATE=0.0004;THETA=0.0005;AC=1216;AN=2184 GT:DS:GL:BD 0.55677658 1
1 25140492 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25140537 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8890;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25140634 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25140702 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25140764 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25140825 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3492;AVGPOST=0.9996;RSQ=0.9992;ERATE=0.0003;THETA=0.0044;AC=762;AN=2184 GT:DS:GL:BD 0.34890109 0
1 25140899 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8380;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25140930 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25140986 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7559;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25141049 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6402;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25141102 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7583;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25141120 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25141200 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25141298 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5183;ERATE=0.0004;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25141395 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6958;ERATE=0.0007;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25141418 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9989;RSQ=0.8989;ERATE=0.0003;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25141490 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0018;AVGPOST=0.9985;RSQ=0.6627;ERATE=0.0004;THETA=0.0034;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25141651 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.6288;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25141761 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.780;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4706;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25141795 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.752;LDAF=0.9561;AVGPOST=0.9774;RSQ=0.8256;ERATE=0.0005;THETA=0.0004;AC=2097;AN=2184 GT:DS:GL:BD 0.96016484 1
1 25141854 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.964;BRSQ=0.386;LDAF=0.0317;AVGPOST=0.9663;RSQ=0.5871;ERATE=0.0040;THETA=0.0007;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 25141991 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.741;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5743;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25142097 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9863;AVGPOST=0.9991;RSQ=0.9752;ERATE=0.0005;THETA=0.0005;AC=2155;AN=2184 GT:DS:GL:BD 0.98672163 1
1 25142282 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6247;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25142283 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8260;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25142325 . G GTAGA 320 PASS INDEL;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6684;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25142391 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0005;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25142454 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0057;AVGPOST=0.9987;RSQ=0.9100;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25142581 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25142641 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4738;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25142747 . T TG 575 PASS INDEL;BAVGPOST=0.992;BRSQ=0.836;LDAF=0.0301;AVGPOST=0.9807;RSQ=0.7404;ERATE=0.0019;THETA=0.0013;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 25142855 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.960;BRSQ=0.635;LDAF=0.9561;AVGPOST=0.9659;RSQ=0.7245;ERATE=0.0008;THETA=0.0010;AC=2105;AN=2184 GT:DS:GL:BD 0.96382785 1
1 25142889 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.887;BRSQ=0.531;LDAF=0.8323;AVGPOST=0.8448;RSQ=0.5343;ERATE=0.0592;THETA=0.0005;AC=1910;AN=2184 GT:DS:GL:BD 0.87454212 1
1 25142933 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.969;LDAF=0.0236;AVGPOST=0.9989;RSQ=0.9821;ERATE=0.0004;THETA=0.0013;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 25142938 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5323;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25143069 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25143103 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8667;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25143126 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.846;LDAF=0.0110;AVGPOST=0.9962;RSQ=0.8492;ERATE=0.0004;THETA=0.0009;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 25143144 . T TTAAA 154 PASS INDEL;BAVGPOST=0.999;BRSQ=0.720;LDAF=0.0018;AVGPOST=0.9986;RSQ=0.6719;ERATE=0.0004;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25143159 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.5830;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25143355 . CTG C 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6252;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25143550 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6706;ERATE=0.0005;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25143693 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.813;LDAF=0.0057;AVGPOST=0.9987;RSQ=0.8958;ERATE=0.0005;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 25143714 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6359;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25143723 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7330;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25143730 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25143802 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.815;LDAF=0.0235;AVGPOST=0.9936;RSQ=0.8790;ERATE=0.0005;THETA=0.0006;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 25143851 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8315;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25143870 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8313;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25143906 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.892;LDAF=0.0486;AVGPOST=0.9898;RSQ=0.9166;ERATE=0.0007;THETA=0.0010;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 25143963 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.909;LDAF=0.0082;AVGPOST=0.9992;RSQ=0.9628;ERATE=0.0003;THETA=0.0008;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 25143992 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0030;AVGPOST=0.9986;RSQ=0.8218;ERATE=0.0005;THETA=0.0014;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25144107 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.680;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6732;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25144156 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9208;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25144171 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25144238 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25144315 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7452;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25144322 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5149;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25144397 . CAG C 38 PASS INDEL;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5752;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25144448 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0038;AVGPOST=0.9980;RSQ=0.7710;ERATE=0.0010;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25144459 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.880;LDAF=0.0095;AVGPOST=0.9976;RSQ=0.9025;ERATE=0.0007;THETA=0.0008;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 25144486 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.808;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8879;ERATE=0.0006;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25144496 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25144573 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9510;AVGPOST=0.9995;RSQ=0.9958;ERATE=0.0004;THETA=0.0008;AC=2077;AN=2184 GT:DS:GL:BD 0.95100731 1
1 25144684 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.788;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8411;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25144734 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.9012;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25144756 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0023;AVGPOST=0.9987;RSQ=0.7649;ERATE=0.0005;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25144774 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25144787 . G GT 437 PASS INDEL;BAVGPOST=0.991;BRSQ=0.545;LDAF=0.0096;AVGPOST=0.9903;RSQ=0.5880;ERATE=0.0019;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25144998 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0095;AVGPOST=0.9991;RSQ=0.9547;ERATE=0.0004;THETA=0.0007;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 25145044 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.803;LDAF=0.0029;AVGPOST=0.9985;RSQ=0.8059;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25145125 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.6413;ERATE=0.0003;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25145128 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.9537;AVGPOST=0.9991;RSQ=0.9924;ERATE=0.0003;THETA=0.0007;AC=2083;AN=2184 GT:DS:GL:BD 0.95375460 1
1 25145236 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6141;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25145265 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25145452 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4431;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25145599 . C CA 159 PASS INDEL;BAVGPOST=1.000;BRSQ=0.777;LDAF=0.0020;AVGPOST=0.9973;RSQ=0.5067;ERATE=0.0005;THETA=0.0056;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25145668 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9991;RSQ=0.9163;ERATE=0.0003;THETA=0.0012;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25145881 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0028;AVGPOST=0.9971;RSQ=0.6023;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25145948 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0062;AVGPOST=0.9956;RSQ=0.7076;ERATE=0.0008;THETA=0.0028;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25145970 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0023;AVGPOST=0.9963;RSQ=0.3223;ERATE=0.0007;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25146150 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.552;LDAF=0.0019;AVGPOST=0.9971;RSQ=0.3354;ERATE=0.0007;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25146181 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.498;LDAF=0.0017;AVGPOST=0.9974;RSQ=0.3213;ERATE=0.0009;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25146486 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.958;LDAF=0.3697;AVGPOST=0.9809;RSQ=0.9654;ERATE=0.0010;THETA=0.0005;AC=804;AN=2184 GT:DS:GL:BD 0.36813188 0
1 25146535 . C CT 2952 PASS INDEL;BAVGPOST=0.660;BRSQ=0.361;LDAF=0.5541;AVGPOST=0.6465;RSQ=0.3545;ERATE=0.0507;THETA=0.0010;AC=1262;AN=2184 GT:DS:GL:BD 0.57783884 1
1 25146537 . TC T 722 PASS INDEL;BAVGPOST=0.690;BRSQ=0.175;LDAF=0.3062;AVGPOST=0.6468;RSQ=0.2774;ERATE=0.0355;THETA=0.0009;AC=405;AN=2184 GT:DS:GL:BD 0.18543956 0
1 25146538 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.964;BRSQ=0.392;LDAF=0.9416;AVGPOST=0.9176;RSQ=0.4314;ERATE=0.0067;THETA=0.0007;AC=2121;AN=2184 GT:DS:GL:BD 0.97115386 1
1 25146553 . A AAG 293 PASS INDEL;BAVGPOST=0.917;BRSQ=0.193;LDAF=0.0957;AVGPOST=0.8651;RSQ=0.3757;ERATE=0.0117;THETA=0.0013;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 25146562 . ATATATATG A 2926 PASS INDEL;BAVGPOST=0.441;BRSQ=0.150;LDAF=0.4938;AVGPOST=0.6240;RSQ=0.3097;ERATE=0.0417;THETA=0.0007;AC=1059;AN=2184 GT:DS:GL:BD 0.48489010 0
1 25146564 rs112682553 ATATATG A 4937 PASS INDEL;BAVGPOST=0.577;BRSQ=0.214;LDAF=0.6486;AVGPOST=0.6351;RSQ=0.3070;ERATE=0.0432;THETA=0.0003;AC=1587;AN=2184 GT:DS:GL:BD 0.72664833 1
1 25146566 rs112682553 ATATG A 7902 PASS INDEL;BAVGPOST=0.690;BRSQ=0.239;LDAF=0.7742;AVGPOST=0.7475;RSQ=0.4045;ERATE=0.0174;THETA=0.0034;AC=1848;AN=2184 GT:DS:GL:BD 0.84615386 1
1 25146568 rs112682553 ATG A 7775 PASS INDEL;BAVGPOST=0.817;BRSQ=0.134;LDAF=0.8638;AVGPOST=0.8263;RSQ=0.4307;ERATE=0.0057;THETA=0.0003;AC=1992;AN=2184 GT:DS:GL:BD 0.91208792 1
1 25146682 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.734;LDAF=0.0014;AVGPOST=0.9979;RSQ=0.3481;ERATE=0.0006;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25146683 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5281;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25146857 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0031;AVGPOST=0.9947;RSQ=0.3599;ERATE=0.0007;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25146911 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0017;AVGPOST=0.9976;RSQ=0.3643;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25146985 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.979;LDAF=0.9771;AVGPOST=0.9947;RSQ=0.9258;ERATE=0.0005;THETA=0.0004;AC=2135;AN=2184 GT:DS:GL:BD 0.97756410 1
1 25147201 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.874;LDAF=0.0303;AVGPOST=0.9992;RSQ=0.9887;ERATE=0.0004;THETA=0.0009;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 25147210 rs72078941 TTCTC T 78725 PASS INDEL;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.5842;AVGPOST=0.9901;RSQ=0.9846;ERATE=0.0011;THETA=0.0014;AC=1278;AN=2184 GT:DS:GL:BD 0.58516484 1
1 25147262 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0240;AVGPOST=0.9995;RSQ=0.9909;ERATE=0.0004;THETA=0.0007;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 25147284 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7592;ERATE=0.0006;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25147341 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25147345 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25147445 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.594;LDAF=0.0045;AVGPOST=0.9963;RSQ=0.6126;ERATE=0.0010;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25147453 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.671;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.3400;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25147565 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.693;LDAF=0.0015;AVGPOST=0.9981;RSQ=0.5209;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25147750 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5832;AVGPOST=0.9974;RSQ=0.9953;ERATE=0.0007;THETA=0.0012;AC=1275;AN=2184 GT:DS:GL:BD 0.58379120 1
1 25147769 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.5967;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25147779 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0163;AVGPOST=0.9991;RSQ=0.9744;ERATE=0.0004;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 25147800 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5260;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25148016 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.782;LDAF=0.0120;AVGPOST=0.9918;RSQ=0.7159;ERATE=0.0008;THETA=0.0011;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 25148135 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.788;LDAF=0.0062;AVGPOST=0.9965;RSQ=0.7658;ERATE=0.0010;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25148180 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4512;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25148217 . A AT 39 PASS INDEL;BAVGPOST=0.990;BRSQ=0.532;LDAF=0.0161;AVGPOST=0.9786;RSQ=0.4565;ERATE=0.0078;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 25148291 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5834;AVGPOST=0.9984;RSQ=0.9971;ERATE=0.0005;THETA=0.0006;AC=1275;AN=2184 GT:DS:GL:BD 0.58379120 1
1 25148367 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3678;AVGPOST=0.9977;RSQ=0.9958;ERATE=0.0006;THETA=0.0010;AC=802;AN=2184 GT:DS:GL:BD 0.36721611 0
1 25148686 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5835;AVGPOST=0.9983;RSQ=0.9969;ERATE=0.0004;THETA=0.0007;AC=1275;AN=2184 GT:DS:GL:BD 0.58379120 1
1 25148746 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7822;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25148789 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7149;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25148988 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0242;AVGPOST=0.9989;RSQ=0.9797;ERATE=0.0004;THETA=0.0007;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 25148999 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0168;AVGPOST=0.9981;RSQ=0.9473;ERATE=0.0007;THETA=0.0011;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 25149160 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6921;ERATE=0.0005;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25149202 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5104;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25149261 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.862;LDAF=0.0026;AVGPOST=0.9992;RSQ=0.8658;ERATE=0.0005;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25149516 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7629;ERATE=0.0005;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25149577 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25149638 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8498;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25149640 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5749;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25149642 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.705;LDAF=0.0015;AVGPOST=0.9985;RSQ=0.5857;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25149792 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5469;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25149877 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7344;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25149888 . CT C 114 PASS INDEL;BAVGPOST=1.000;BRSQ=0.751;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5706;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25149938 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0019;AVGPOST=0.9986;RSQ=0.7335;ERATE=0.0004;THETA=0.0019;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25149944 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.951;BRSQ=0.903;LDAF=0.2785;AVGPOST=0.9830;RSQ=0.9689;ERATE=0.0010;THETA=0.0007;AC=604;AN=2184 GT:DS:GL:BD 0.27655679 0
1 25150011 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.653;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7869;ERATE=0.0004;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25150036 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.588;LDAF=0.0016;AVGPOST=0.9976;RSQ=0.3758;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25150051 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.711;LDAF=0.0221;AVGPOST=0.9911;RSQ=0.8278;ERATE=0.0009;THETA=0.0005;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 25150169 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.795;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8490;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25150213 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0019;AVGPOST=0.9978;RSQ=0.4749;ERATE=0.0010;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25150281 . A AG 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.720;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5507;ERATE=0.0005;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25150318 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0031;AVGPOST=0.9980;RSQ=0.7625;ERATE=0.0007;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25150338 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.632;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5592;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25150790 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.570;LDAF=0.0021;AVGPOST=0.9982;RSQ=0.6186;ERATE=0.0005;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25150809 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.968;LDAF=0.0210;AVGPOST=0.9984;RSQ=0.9714;ERATE=0.0003;THETA=0.0008;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 25150863 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.650;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4956;ERATE=0.0004;THETA=0.0054;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25150871 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7494;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25151028 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0242;AVGPOST=0.9987;RSQ=0.9763;ERATE=0.0005;THETA=0.0005;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 25151166 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0015;AVGPOST=0.9990;RSQ=0.7634;ERATE=0.0005;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25151228 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.562;LDAF=0.0025;AVGPOST=0.9968;RSQ=0.5142;ERATE=0.0006;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25151335 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0019;AVGPOST=0.9974;RSQ=0.5035;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25151551 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9788;AVGPOST=0.9997;RSQ=0.9951;ERATE=0.0004;THETA=0.0006;AC=2138;AN=2184 GT:DS:GL:BD 0.97893775 1
1 25151649 . AATT A 26 PASS INDEL;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0029;AVGPOST=0.9979;RSQ=0.7341;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25151650 . ATTATT A 467 PASS INDEL;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9036;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25151723 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7607;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25151785 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8974;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25151861 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25151878 . TC T 164 PASS INDEL;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0029;AVGPOST=0.9981;RSQ=0.7517;ERATE=0.0004;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25151977 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0021;AVGPOST=0.9976;RSQ=0.5579;ERATE=0.0006;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25151987 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0004;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25152044 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.751;LDAF=0.0041;AVGPOST=0.9986;RSQ=0.8624;ERATE=0.0004;THETA=0.0013;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25152143 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.850;LDAF=0.0253;AVGPOST=0.9965;RSQ=0.9446;ERATE=0.0004;THETA=0.0018;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 25152345 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.701;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6151;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25152357 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8087;ERATE=0.0009;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25152426 . G GT 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.770;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5512;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25152581 . TAC T 657 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0038;AVGPOST=0.9995;RSQ=0.9369;ERATE=0.0003;THETA=0.0025;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25152737 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0026;AVGPOST=0.9991;RSQ=0.8711;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25152798 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.828;LDAF=0.0171;AVGPOST=0.9958;RSQ=0.8966;ERATE=0.0005;THETA=0.0028;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 25152828 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.697;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4644;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25152885 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0029;AVGPOST=0.9987;RSQ=0.8359;ERATE=0.0004;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25152942 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.888;LDAF=0.0139;AVGPOST=0.9973;RSQ=0.9173;ERATE=0.0004;THETA=0.0008;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 25152968 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7271;ERATE=0.0005;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25153083 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.7082;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25153102 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25153193 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8731;ERATE=0.0006;THETA=0.0028;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25153411 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9809;ERATE=0.0006;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25153429 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0041;AVGPOST=1.0000;RSQ=0.9947;ERATE=0.0005;THETA=0.0011;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25153478 . TCC T 85 PASS INDEL;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0024;AVGPOST=0.9973;RSQ=0.5372;ERATE=0.0008;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25153487 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25153629 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25153648 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25153654 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0050;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0004;THETA=0.0027;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25153692 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9790;AVGPOST=1.0000;RSQ=0.9992;ERATE=0.0003;THETA=0.0008;AC=2138;AN=2184 GT:DS:GL:BD 0.97893775 1
1 25153707 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25153997 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.902;LDAF=0.0106;AVGPOST=0.9976;RSQ=0.9219;ERATE=0.0003;THETA=0.0008;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 25154108 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.885;LDAF=0.0310;AVGPOST=0.9952;RSQ=0.9425;ERATE=0.0004;THETA=0.0009;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 25154197 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7327;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25154364 . TTTCTC T 39 PASS INDEL;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6336;ERATE=0.0006;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25154424 . G GC 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4391;ERATE=0.0006;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25154572 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.846;LDAF=0.0051;AVGPOST=0.9985;RSQ=0.8768;ERATE=0.0004;THETA=0.0011;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25154615 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.740;LDAF=0.0015;AVGPOST=0.9983;RSQ=0.5112;ERATE=0.0005;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25154749 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8057;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25154894 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0248;AVGPOST=0.9985;RSQ=0.9750;ERATE=0.0005;THETA=0.0026;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 25154974 . GCTAA G 597 PASS INDEL;BAVGPOST=0.998;BRSQ=0.771;LDAF=0.0060;AVGPOST=0.9962;RSQ=0.7492;ERATE=0.0008;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25155027 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.813;LDAF=0.0031;AVGPOST=0.9979;RSQ=0.7365;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25155040 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0037;AVGPOST=0.9997;RSQ=0.9647;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25155185 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.958;BRSQ=0.917;LDAF=0.3716;AVGPOST=0.9740;RSQ=0.9565;ERATE=0.0008;THETA=0.0010;AC=803;AN=2184 GT:DS:GL:BD 0.36767399 0
1 25155188 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.959;BRSQ=0.918;LDAF=0.3605;AVGPOST=0.9580;RSQ=0.9308;ERATE=0.0018;THETA=0.0006;AC=778;AN=2184 GT:DS:GL:BD 0.35622710 0
1 25155213 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.628;LDAF=0.0033;AVGPOST=0.9963;RSQ=0.6130;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25155287 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5844;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25155292 . C CT 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.734;LDAF=0.0021;AVGPOST=0.9967;RSQ=0.3385;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25155513 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25155580 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6010;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25155594 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.848;LDAF=0.0043;AVGPOST=0.9972;RSQ=0.7387;ERATE=0.0019;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25155715 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6205;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25155966 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7457;ERATE=0.0004;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25156024 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5745;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25156100 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0168;AVGPOST=0.9988;RSQ=0.9701;ERATE=0.0004;THETA=0.0005;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 25156312 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5324;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25156320 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.806;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6207;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25156402 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.887;LDAF=0.0106;AVGPOST=0.9986;RSQ=0.9439;ERATE=0.0006;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 25156511 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9747;ERATE=0.0003;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25156788 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.9783;AVGPOST=0.9985;RSQ=0.9782;ERATE=0.0004;THETA=0.0004;AC=2138;AN=2184 GT:DS:GL:BD 0.97893775 1
1 25157047 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.721;LDAF=0.0019;AVGPOST=0.9983;RSQ=0.6196;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25157173 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.937;LDAF=0.0157;AVGPOST=0.9992;RSQ=0.9798;ERATE=0.0003;THETA=0.0015;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 25157266 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25157346 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25157406 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0041;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25157416 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.6516;ERATE=0.0006;THETA=0.0023;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25157462 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6347;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25157574 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25157619 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0041;AVGPOST=0.9995;RSQ=0.9524;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25157741 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.637;LDAF=0.0016;AVGPOST=0.9981;RSQ=0.4849;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25158008 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.9514;AVGPOST=0.9989;RSQ=0.9917;ERATE=0.0003;THETA=0.0012;AC=2077;AN=2184 GT:DS:GL:BD 0.95100731 1
1 25158046 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6179;ERATE=0.0004;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25158253 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.5893;ERATE=0.0006;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25158500 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.5540;AVGPOST=0.9971;RSQ=0.9955;ERATE=0.0003;THETA=0.0009;AC=1210;AN=2184 GT:DS:GL:BD 0.55402929 1
1 25158629 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6075;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25158714 . A AT 4173 PASS INDEL;BAVGPOST=0.435;BRSQ=0.089;LDAF=0.4721;AVGPOST=0.7223;RSQ=0.5645;ERATE=0.0144;THETA=0.0007;AC=916;AN=2184 GT:DS:GL:BD 0.41941392 0
1 25161448 . AC A 179 PASS INDEL;BAVGPOST=0.563;BRSQ=0.017;LDAF=0.1782;AVGPOST=0.7529;RSQ=0.3083;ERATE=0.0135;THETA=0.0009;AC=159;AN=2184 GT:DS:GL:BD 0.07280220 0
1 25161505 . TTATA T 1358 PASS INDEL;BAVGPOST=0.396;BRSQ=0.152;LDAF=0.6793;AVGPOST=0.6727;RSQ=0.4417;ERATE=0.0205;THETA=0.0008;AC=1658;AN=2184 GT:DS:GL:BD 0.75915754 1
1 25161506 . TATA T 1212 PASS INDEL;BAVGPOST=0.452;BRSQ=0.165;LDAF=0.7219;AVGPOST=0.7267;RSQ=0.5174;ERATE=0.0138;THETA=0.0006;AC=1748;AN=2184 GT:DS:GL:BD 0.80036628 1
1 25161576 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25161662 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3689;AVGPOST=0.9961;RSQ=0.9929;ERATE=0.0009;THETA=0.0004;AC=805;AN=2184 GT:DS:GL:BD 0.36858973 0
1 25161679 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.741;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6027;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25161769 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0019;AVGPOST=0.9982;RSQ=0.5997;ERATE=0.0006;THETA=0.0023;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25161899 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.966;LDAF=0.0544;AVGPOST=0.9932;RSQ=0.9499;ERATE=0.0007;THETA=0.0008;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 25162016 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.834;LDAF=0.0138;AVGPOST=0.9953;RSQ=0.8664;ERATE=0.0007;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 25162022 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.564;LDAF=0.0087;AVGPOST=0.9892;RSQ=0.5370;ERATE=0.0006;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 25162144 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.775;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.4723;ERATE=0.0005;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25162298 . GAAGAA G 81 PASS INDEL;BAVGPOST=1.000;BRSQ=0.753;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.3826;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25162312 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25162316 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0039;AVGPOST=0.9987;RSQ=0.8731;ERATE=0.0005;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25162420 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0015;AVGPOST=0.9985;RSQ=0.6035;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25162444 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5544;AVGPOST=0.9956;RSQ=0.9940;ERATE=0.0009;THETA=0.0007;AC=1212;AN=2184 GT:DS:GL:BD 0.55494505 1
1 25162923 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5865;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25163052 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.914;LDAF=0.0096;AVGPOST=0.9977;RSQ=0.8904;ERATE=0.0005;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 25163173 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3516;AVGPOST=0.9968;RSQ=0.9943;ERATE=0.0004;THETA=0.0005;AC=765;AN=2184 GT:DS:GL:BD 0.35027471 0
1 25163282 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0010;AVGPOST=0.9986;RSQ=0.3887;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25163283 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.672;LDAF=0.0035;AVGPOST=0.9984;RSQ=0.8032;ERATE=0.0006;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25163350 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0041;AVGPOST=0.9996;RSQ=0.9575;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25163358 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7301;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25163363 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0042;AVGPOST=0.9993;RSQ=0.9305;ERATE=0.0003;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25163537 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7132;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25163637 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.579;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6586;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25163668 . G GA 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.6678;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25163704 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.822;LDAF=0.0037;AVGPOST=0.9981;RSQ=0.8055;ERATE=0.0004;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25163725 . AAGG A 1138 PASS INDEL;BAVGPOST=0.997;BRSQ=0.759;LDAF=0.0069;AVGPOST=0.9978;RSQ=0.8493;ERATE=0.0006;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 25163731 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0060;AVGPOST=0.9980;RSQ=0.8817;ERATE=0.0004;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25163866 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0065;AVGPOST=0.9989;RSQ=0.9513;ERATE=0.0003;THETA=0.0014;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 25163878 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0069;AVGPOST=0.9981;RSQ=0.8728;ERATE=0.0003;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 25163900 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4876;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25164113 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.5552;AVGPOST=0.9968;RSQ=0.9952;ERATE=0.0005;THETA=0.0007;AC=1214;AN=2184 GT:DS:GL:BD 0.55586082 1
1 25164158 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0280;AVGPOST=0.9998;RSQ=0.9970;ERATE=0.0003;THETA=0.0013;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 25164212 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8893;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25164248 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.798;LDAF=0.0069;AVGPOST=0.9959;RSQ=0.7628;ERATE=0.0008;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 25164280 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6760;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25164372 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0280;AVGPOST=0.9998;RSQ=0.9963;ERATE=0.0003;THETA=0.0004;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 25164623 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6047;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25164778 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3694;AVGPOST=0.9988;RSQ=0.9977;ERATE=0.0005;THETA=0.0003;AC=806;AN=2184 GT:DS:GL:BD 0.36904761 0
1 25164889 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0029;AVGPOST=0.9987;RSQ=0.8000;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25165116 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0047;AVGPOST=0.9989;RSQ=0.9114;ERATE=0.0003;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25165180 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.665;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5677;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25165353 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7079;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25165409 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.7582;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25165424 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.782;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6419;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25165550 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6525;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25165876 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.590;LDAF=0.0083;AVGPOST=0.9909;RSQ=0.5531;ERATE=0.0014;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25165883 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0087;AVGPOST=0.9933;RSQ=0.6718;ERATE=0.0010;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 25165980 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.661;LDAF=0.0053;AVGPOST=0.9950;RSQ=0.6165;ERATE=0.0005;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25166022 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.669;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.3716;ERATE=0.0007;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25166082 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.935;LDAF=0.2194;AVGPOST=0.9876;RSQ=0.9731;ERATE=0.0009;THETA=0.0003;AC=480;AN=2184 GT:DS:GL:BD 0.21978022 0
1 25166337 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25166340 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25166341 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25166514 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0008;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 25166735 . A AT 111 PASS INDEL;BAVGPOST=0.991;BRSQ=0.466;LDAF=0.0173;AVGPOST=0.9767;RSQ=0.4476;ERATE=0.0059;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 25166867 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25167114 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0009;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25167187 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9780;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25167255 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25167419 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0013;AVGPOST=0.9999;RSQ=0.9672;ERATE=0.0010;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25167425 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25167476 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0065;AVGPOST=0.9998;RSQ=0.9845;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 25167528 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25167654 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25167718 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.647;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5565;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25167746 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7787;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25167963 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0010;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25168030 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0122;AVGPOST=0.9985;RSQ=0.9513;ERATE=0.0003;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 25168124 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5533;AVGPOST=0.9977;RSQ=0.9964;ERATE=0.0004;THETA=0.0006;AC=1207;AN=2184 GT:DS:GL:BD 0.55265570 1
1 25168193 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8441;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25168278 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0002;AVGPOST=0.9996;RSQ=0.0941;ERATE=0.0004;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 25168315 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0123;AVGPOST=0.9978;RSQ=0.9345;ERATE=0.0004;THETA=0.0008;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 25168341 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8640;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25168404 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.748;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6354;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25168431 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.965;LDAF=0.0521;AVGPOST=0.9941;RSQ=0.9556;ERATE=0.0004;THETA=0.0001;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 25168432 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7166;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25168518 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0048;AVGPOST=0.9979;RSQ=0.8241;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25168594 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5709;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25168691 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.807;LDAF=0.0035;AVGPOST=0.9986;RSQ=0.8430;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25168714 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.727;LDAF=0.0029;AVGPOST=0.9976;RSQ=0.6869;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25168732 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25168767 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5836;ERATE=0.0003;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25168913 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4713;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25169029 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6828;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25169190 . G GT 60 PASS INDEL;BAVGPOST=0.980;BRSQ=0.542;LDAF=0.0346;AVGPOST=0.9582;RSQ=0.4915;ERATE=0.0104;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 25169277 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5771;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25169632 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25169634 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3702;AVGPOST=0.9968;RSQ=0.9942;ERATE=0.0006;THETA=0.0004;AC=807;AN=2184 GT:DS:GL:BD 0.36950549 0
1 25169640 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25169722 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.823;LDAF=0.0048;AVGPOST=0.9989;RSQ=0.8906;ERATE=0.0005;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25169726 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25169800 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0012;AVGPOST=0.9983;RSQ=0.4094;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25169875 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.9497;AVGPOST=0.9988;RSQ=0.9905;ERATE=0.0005;THETA=0.0003;AC=2075;AN=2184 GT:DS:GL:BD 0.95009160 1
1 25170138 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0001;AVGPOST=0.9997;RSQ=0.0998;ERATE=0.0003;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 25170173 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.765;LDAF=0.0019;AVGPOST=0.9976;RSQ=0.5846;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25170195 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.718;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4512;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25170203 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.855;LDAF=0.0128;AVGPOST=0.9978;RSQ=0.9363;ERATE=0.0004;THETA=0.0006;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 25170284 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6691;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25170401 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6343;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25170602 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.646;LDAF=0.0035;AVGPOST=0.9970;RSQ=0.6656;ERATE=0.0010;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25170632 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.725;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4648;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25170807 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.713;LDAF=0.0019;AVGPOST=0.9993;RSQ=0.8250;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25170828 . A AT 16 PASS INDEL;BAVGPOST=0.987;BRSQ=0.463;LDAF=0.0245;AVGPOST=0.9671;RSQ=0.4391;ERATE=0.0066;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 25170840 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.744;LDAF=0.0022;AVGPOST=0.9991;RSQ=0.8152;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25170854 . A AC 27 PASS INDEL;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.5037;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25170958 rs112201153 C CT 1774 PASS INDEL;BAVGPOST=0.996;BRSQ=0.930;LDAF=0.0277;AVGPOST=0.9916;RSQ=0.8799;ERATE=0.0014;THETA=0.0005;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 25171052 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0161;AVGPOST=0.9999;RSQ=0.9960;ERATE=0.0003;THETA=0.0006;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 25171088 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3513;AVGPOST=0.9965;RSQ=0.9940;ERATE=0.0005;THETA=0.0003;AC=765;AN=2184 GT:DS:GL:BD 0.35027471 0
1 25171194 . G GTGTGTA 2815 PASS INDEL;BAVGPOST=0.994;BRSQ=0.730;LDAF=0.0171;AVGPOST=0.9975;RSQ=0.9388;ERATE=0.0006;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 25171269 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25171304 . TAGTA T 153 PASS INDEL;BAVGPOST=1.000;BRSQ=0.767;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5493;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25171306 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.740;LDAF=0.0055;AVGPOST=0.9949;RSQ=0.6498;ERATE=0.0014;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25171362 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5640;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25171371 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0027;AVGPOST=0.9993;RSQ=0.8683;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25171473 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0035;AVGPOST=0.9967;RSQ=0.6161;ERATE=0.0013;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25171481 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0294;AVGPOST=0.9979;RSQ=0.9726;ERATE=0.0004;THETA=0.0005;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 25171673 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.940;LDAF=0.3234;AVGPOST=0.9771;RSQ=0.9594;ERATE=0.0027;THETA=0.0013;AC=705;AN=2184 GT:DS:GL:BD 0.32280219 0
1 25171719 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3485;AVGPOST=0.9985;RSQ=0.9971;ERATE=0.0004;THETA=0.0007;AC=760;AN=2184 GT:DS:GL:BD 0.34798536 0
1 25171728 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25171771 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0161;AVGPOST=0.9997;RSQ=0.9921;ERATE=0.0004;THETA=0.0006;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 25171862 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.942;LDAF=0.0132;AVGPOST=0.9989;RSQ=0.9607;ERATE=0.0004;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 25171917 . A AT 122 PASS INDEL;BAVGPOST=1.000;BRSQ=0.760;LDAF=0.0013;AVGPOST=0.9981;RSQ=0.3975;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25172007 . T TG 5098 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0296;AVGPOST=0.9971;RSQ=0.9607;ERATE=0.0004;THETA=0.0005;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 25172116 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0027;AVGPOST=0.9997;RSQ=0.9548;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25172192 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.935;LDAF=0.0138;AVGPOST=0.9984;RSQ=0.9498;ERATE=0.0003;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 25172511 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5569;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25172528 . TAAG T 146 PASS INDEL;BAVGPOST=0.999;BRSQ=0.846;LDAF=0.0030;AVGPOST=0.9981;RSQ=0.7302;ERATE=0.0007;THETA=0.0014;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25172552 rs10601870 AAATTC A 34625 PASS INDEL;BAVGPOST=0.965;BRSQ=0.926;LDAF=0.3400;AVGPOST=0.9751;RSQ=0.9593;ERATE=0.0005;THETA=0.0005;AC=752;AN=2184 GT:DS:GL:BD 0.34432235 0
1 25172559 . ATTC A 6632 PASS INDEL;BAVGPOST=0.962;BRSQ=0.915;LDAF=0.3167;AVGPOST=0.9390;RSQ=0.8894;ERATE=0.0147;THETA=0.0005;AC=696;AN=2184 GT:DS:GL:BD 0.31868133 0
1 25172596 . CAT C 19 PASS INDEL;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0015;AVGPOST=0.9978;RSQ=0.3769;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25172613 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0033;AVGPOST=0.9988;RSQ=0.8324;ERATE=0.0016;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25172621 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5492;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25172643 . ACT A 24052 PASS INDEL;BAVGPOST=0.971;BRSQ=0.948;LDAF=0.5292;AVGPOST=0.9464;RSQ=0.9243;ERATE=0.0132;THETA=0.0005;AC=1176;AN=2184 GT:DS:GL:BD 0.53846157 1
1 25172674 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.931;LDAF=0.0168;AVGPOST=0.9984;RSQ=0.9582;ERATE=0.0003;THETA=0.0006;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 25172724 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.9035;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25172755 . G GA 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25172796 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0068;AVGPOST=0.9980;RSQ=0.9053;ERATE=0.0004;THETA=0.0030;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 25172810 . AAAG A 2633 PASS INDEL;BAVGPOST=0.997;BRSQ=0.845;LDAF=0.0094;AVGPOST=0.9974;RSQ=0.9037;ERATE=0.0005;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 25172889 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25172981 . CAA C 195 PASS INDEL;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0015;AVGPOST=0.9985;RSQ=0.5738;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25173037 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5542;AVGPOST=0.9968;RSQ=0.9951;ERATE=0.0006;THETA=0.0008;AC=1211;AN=2184 GT:DS:GL:BD 0.55448717 1
1 25173102 . CAT C 342 PASS INDEL;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0044;AVGPOST=0.9984;RSQ=0.8576;ERATE=0.0006;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25173165 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.900;LDAF=0.0164;AVGPOST=0.9975;RSQ=0.9345;ERATE=0.0005;THETA=0.0007;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 25173176 . CT C 196 PASS INDEL;BAVGPOST=0.998;BRSQ=0.792;LDAF=0.0046;AVGPOST=0.9973;RSQ=0.7437;ERATE=0.0005;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25173243 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.960;LDAF=0.0291;AVGPOST=0.9989;RSQ=0.9849;ERATE=0.0003;THETA=0.0012;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 25173287 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8566;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25173410 . C CA 798 PASS INDEL;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0156;AVGPOST=0.9956;RSQ=0.8857;ERATE=0.0005;THETA=0.0009;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 25173548 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0199;AVGPOST=0.9972;RSQ=0.9392;ERATE=0.0006;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 25173768 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25173864 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0028;AVGPOST=0.9996;RSQ=0.9384;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25173873 rs112141198 CAT C 317 PASS INDEL;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0048;AVGPOST=0.9984;RSQ=0.8695;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25174003 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.412;LDAF=0.9802;AVGPOST=0.9724;RSQ=0.4726;ERATE=0.0026;THETA=0.0008;AC=2157;AN=2184 GT:DS:GL:BD 0.98763734 1
1 25174216 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.7702;ERATE=0.0004;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25174322 . G GC 222 PASS INDEL;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7117;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25174416 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0192;AVGPOST=0.9984;RSQ=0.9592;ERATE=0.0004;THETA=0.0005;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 25174470 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0194;AVGPOST=0.9984;RSQ=0.9621;ERATE=0.0006;THETA=0.0007;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 25174566 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0039;AVGPOST=0.9977;RSQ=0.7416;ERATE=0.0005;THETA=0.0044;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25174839 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.695;LDAF=0.0030;AVGPOST=0.9976;RSQ=0.6753;ERATE=0.0007;THETA=0.0027;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25175121 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.950;LDAF=0.0217;AVGPOST=0.9923;RSQ=0.8377;ERATE=0.0013;THETA=0.0004;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 25175246 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.989;LDAF=0.5538;AVGPOST=0.9867;RSQ=0.9803;ERATE=0.0011;THETA=0.0006;AC=1206;AN=2184 GT:DS:GL:BD 0.55219781 1
1 25175271 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.715;LDAF=0.0041;AVGPOST=0.9962;RSQ=0.6153;ERATE=0.0006;THETA=0.0011;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25175497 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0040;AVGPOST=0.9987;RSQ=0.8693;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25175542 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0038;AVGPOST=0.9986;RSQ=0.8573;ERATE=0.0003;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25175666 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.550;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5797;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25175669 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5338;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25175703 . CT C 317 PASS INDEL;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0056;AVGPOST=0.9988;RSQ=0.9032;ERATE=0.0005;THETA=0.0021;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25175760 rs111517479 CT C 339 PASS INDEL;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0064;AVGPOST=0.9957;RSQ=0.7345;ERATE=0.0005;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25176035 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.773;LDAF=0.0020;AVGPOST=0.9976;RSQ=0.5447;ERATE=0.0003;THETA=0.0042;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25176035 . CT C 10574 PASS INDEL;BAVGPOST=0.945;BRSQ=0.344;LDAF=0.9079;AVGPOST=0.8688;RSQ=0.3518;ERATE=0.0231;THETA=0.0007;AC=2102;AN=2184 GT:DS:GL:BD 0.96245420 1
1 25176055 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.907;BRSQ=0.728;LDAF=0.7819;AVGPOST=0.8813;RSQ=0.7157;ERATE=0.0657;THETA=0.0007;AC=1758;AN=2184 GT:DS:GL:BD 0.80494505 1
1 25176060 . T TTC 1200 PASS INDEL;BAVGPOST=0.985;BRSQ=0.682;LDAF=0.0226;AVGPOST=0.9832;RSQ=0.6913;ERATE=0.0012;THETA=0.0006;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 25176197 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0281;AVGPOST=0.9994;RSQ=0.9905;ERATE=0.0004;THETA=0.0006;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 25176198 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.759;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.6194;ERATE=0.0005;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25176439 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0184;AVGPOST=0.9955;RSQ=0.9155;ERATE=0.0005;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 25176572 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.987;LDAF=0.3933;AVGPOST=0.9908;RSQ=0.9833;ERATE=0.0025;THETA=0.0005;AC=858;AN=2184 GT:DS:GL:BD 0.39285713 0
1 25176664 . AG A 23857 PASS INDEL;BAVGPOST=0.958;BRSQ=0.934;LDAF=0.5720;AVGPOST=0.9856;RSQ=0.9769;ERATE=0.0017;THETA=0.0010;AC=1258;AN=2184 GT:DS:GL:BD 0.57600731 1
1 25176665 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.958;BRSQ=0.932;LDAF=0.5719;AVGPOST=0.9869;RSQ=0.9792;ERATE=0.0013;THETA=0.0027;AC=1252;AN=2184 GT:DS:GL:BD 0.57326007 1
1 25176712 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.896;LDAF=0.0159;AVGPOST=0.9975;RSQ=0.9377;ERATE=0.0004;THETA=0.0008;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 25176977 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8352;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25177008 . AC A 73 PASS INDEL;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.5161;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25177039 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3687;AVGPOST=0.9964;RSQ=0.9936;ERATE=0.0005;THETA=0.0007;AC=804;AN=2184 GT:DS:GL:BD 0.36813188 0
1 25177089 . CCAGA C 154 PASS INDEL;BAVGPOST=0.999;BRSQ=0.775;LDAF=0.0041;AVGPOST=0.9953;RSQ=0.5835;ERATE=0.0005;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25177171 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5743;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25177523 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.968;LDAF=0.0194;AVGPOST=0.9987;RSQ=0.9686;ERATE=0.0006;THETA=0.0007;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 25177667 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0122;AVGPOST=0.9991;RSQ=0.9702;ERATE=0.0004;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 25177771 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0021;AVGPOST=0.9991;RSQ=0.8226;ERATE=0.0004;THETA=0.0075;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25177772 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0567;AVGPOST=0.9974;RSQ=0.9826;ERATE=0.0005;THETA=0.0004;AC=123;AN=2184 GT:DS:GL:BD 0.05631868 0
1 25177791 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.544;LDAF=0.0038;AVGPOST=0.9945;RSQ=0.4559;ERATE=0.0015;THETA=0.0018;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25177831 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6702;ERATE=0.0005;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25177943 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.779;LDAF=0.0063;AVGPOST=0.9966;RSQ=0.7777;ERATE=0.0005;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25177960 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5558;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25177972 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.9752;AVGPOST=0.9996;RSQ=0.9924;ERATE=0.0004;THETA=0.0003;AC=2130;AN=2184 GT:DS:GL:BD 0.97527474 1
1 25177985 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.3502;AVGPOST=0.9910;RSQ=0.9836;ERATE=0.0024;THETA=0.0004;AC=762;AN=2184 GT:DS:GL:BD 0.34890109 0
1 25177998 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7494;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25178035 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7695;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25178050 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0023;AVGPOST=0.9980;RSQ=0.6291;ERATE=0.0005;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25178163 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8124;ERATE=0.0004;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25178274 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25178310 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.9269;AVGPOST=0.9991;RSQ=0.9952;ERATE=0.0004;THETA=0.0009;AC=2024;AN=2184 GT:DS:GL:BD 0.92673993 1
1 25178410 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6334;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25178455 . C CA 109 PASS INDEL;BAVGPOST=0.997;BRSQ=0.689;LDAF=0.0077;AVGPOST=0.9901;RSQ=0.5066;ERATE=0.0024;THETA=0.0012;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25178467 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9253;ERATE=0.0003;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25178583 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7918;ERATE=0.0004;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25178630 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9751;AVGPOST=0.9996;RSQ=0.9933;ERATE=0.0004;THETA=0.0047;AC=2130;AN=2184 GT:DS:GL:BD 0.97527474 1
1 25178652 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0164;AVGPOST=0.9991;RSQ=0.9765;ERATE=0.0004;THETA=0.0005;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 25178693 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9267;AVGPOST=0.9975;RSQ=0.9895;ERATE=0.0006;THETA=0.0004;AC=2025;AN=2184 GT:DS:GL:BD 0.92719781 1
1 25178744 MERGED_DEL_2_2415 TTTATTCATGGACACTTTTGTCTTTTTTAATCCATTTATGTAAGCGCTGTATAAATTAAGGATTCTAACCATCTGTTTGTGGCATTTCTGCAAGCTTTTTCCCGGTTGTTTGTGTTTTAATTTTGCTTGTATTTTTTCATCATACTGGAAGTTTTTATTTTTATGTGACACGGATCTGTCAAACATTTCC TAGGT . . SV;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0044;AVGPOST=0.9981;RSQ=0.8319;ERATE=0.0011;THETA=0.0015;CIEND=-106,47;CIPOS=-127,30;END=25184034;HOMLEN=0;HOMSEQ;SOURCE=BreakDancer_25178712_25184001,Gen GT:DS:GL:BD 0.00366300 0
1 25178825 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0037;AVGPOST=0.9973;RSQ=0.7450;ERATE=0.0005;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25178969 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9997;AVGPOST=0.9994;RSQ=0.0494;ERATE=0.0004;THETA=0.0028;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 25179066 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5569;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25179126 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0190;AVGPOST=0.9995;RSQ=0.9863;ERATE=0.0004;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 25179321 . TG T 1921 PASS INDEL;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0186;AVGPOST=0.9974;RSQ=0.9420;ERATE=0.0003;THETA=0.0020;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 25179363 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.683;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.3883;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25179463 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25179505 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.9267;AVGPOST=0.9989;RSQ=0.9942;ERATE=0.0005;THETA=0.0002;AC=2024;AN=2184 GT:DS:GL:BD 0.92673993 1
1 25179618 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25179644 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.849;LDAF=0.0032;AVGPOST=0.9982;RSQ=0.7732;ERATE=0.0006;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25179679 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.882;LDAF=0.0050;AVGPOST=0.9981;RSQ=0.8453;ERATE=0.0005;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25179685 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0042;AVGPOST=0.9997;RSQ=0.9688;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25179732 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9750;AVGPOST=0.9994;RSQ=0.9882;ERATE=0.0005;THETA=0.0004;AC=2130;AN=2184 GT:DS:GL:BD 0.97527474 1
1 25179796 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.629;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4622;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25180071 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6935;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25180137 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5835;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25180302 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0037;AVGPOST=0.9956;RSQ=0.5612;ERATE=0.0009;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25180303 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8497;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25180321 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5559;AVGPOST=0.9953;RSQ=0.9935;ERATE=0.0005;THETA=0.0004;AC=1213;AN=2184 GT:DS:GL:BD 0.55540293 1
1 25180357 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0440;AVGPOST=0.9996;RSQ=0.9961;ERATE=0.0003;THETA=0.0003;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 25180374 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.832;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.6905;ERATE=0.0014;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25180410 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5436;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25180512 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.9085;AVGPOST=0.9996;RSQ=0.9981;ERATE=0.0003;THETA=0.0005;AC=1984;AN=2184 GT:DS:GL:BD 0.90842491 1
1 25180580 . T TTG 370 PASS INDEL;BAVGPOST=0.819;BRSQ=0.317;LDAF=0.1811;AVGPOST=0.7851;RSQ=0.4299;ERATE=0.0232;THETA=0.0006;AC=258;AN=2184 GT:DS:GL:BD 0.11813187 0
1 25180605 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0068;AVGPOST=0.9992;RSQ=0.9563;ERATE=0.0004;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 25180627 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5542;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25180645 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.813;LDAF=0.0032;AVGPOST=0.9989;RSQ=0.8369;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25180649 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.733;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5644;ERATE=0.0005;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25180668 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0017;AVGPOST=0.9979;RSQ=0.5511;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25180843 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5060;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25180877 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5091;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25180933 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0043;AVGPOST=0.9989;RSQ=0.8916;ERATE=0.0004;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25180959 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25181009 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25181136 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5630;AVGPOST=0.9978;RSQ=0.9964;ERATE=0.0007;THETA=0.0004;AC=1231;AN=2184 GT:DS:GL:BD 0.56364471 1
1 25181141 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.898;LDAF=0.0028;AVGPOST=0.9984;RSQ=0.7559;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25181210 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5632;AVGPOST=0.9971;RSQ=0.9953;ERATE=0.0007;THETA=0.0005;AC=1231;AN=2184 GT:DS:GL:BD 0.56364471 1
1 25181314 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5634;AVGPOST=0.9986;RSQ=0.9977;ERATE=0.0005;THETA=0.0005;AC=1231;AN=2184 GT:DS:GL:BD 0.56364471 1
1 25181348 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6525;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25181364 . TTTTC T 36 PASS INDEL;BAVGPOST=1.000;BRSQ=0.741;LDAF=0.0022;AVGPOST=0.9989;RSQ=0.7862;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25181434 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8355;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25181518 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0060;AVGPOST=0.9989;RSQ=0.9212;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 25181536 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0039;AVGPOST=0.9979;RSQ=0.7946;ERATE=0.0005;THETA=0.0038;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25181668 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.724;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.6938;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25181751 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25181895 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0203;AVGPOST=0.9997;RSQ=0.9929;ERATE=0.0010;THETA=0.0010;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 25181998 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0065;AVGPOST=0.9999;RSQ=0.9911;ERATE=0.0003;THETA=0.0015;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 25182116 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3451;AVGPOST=0.9976;RSQ=0.9956;ERATE=0.0004;THETA=0.0005;AC=753;AN=2184 GT:DS:GL:BD 0.34478021 0
1 25182252 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9085;AVGPOST=0.9993;RSQ=0.9970;ERATE=0.0003;THETA=0.0005;AC=1984;AN=2184 GT:DS:GL:BD 0.90842491 1
1 25182254 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.643;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6553;ERATE=0.0004;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25182275 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9085;AVGPOST=0.9999;RSQ=0.9994;ERATE=0.0003;THETA=0.0008;AC=1984;AN=2184 GT:DS:GL:BD 0.90842491 1
1 25182291 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9726;ERATE=0.0004;THETA=0.0010;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25182326 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25182422 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9752;AVGPOST=0.9998;RSQ=0.9967;ERATE=0.0003;THETA=0.0005;AC=2130;AN=2184 GT:DS:GL:BD 0.97527474 1
1 25182441 rs71914837 TCA T 32044 PASS INDEL;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.3439;AVGPOST=0.9931;RSQ=0.9878;ERATE=0.0014;THETA=0.0009;AC=751;AN=2184 GT:DS:GL:BD 0.34386447 0
1 25182468 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8468;ERATE=0.0013;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25182525 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6377;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25182548 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3446;AVGPOST=0.9970;RSQ=0.9950;ERATE=0.0004;THETA=0.0051;AC=751;AN=2184 GT:DS:GL:BD 0.34386447 0
1 25182740 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0442;AVGPOST=0.9994;RSQ=0.9940;ERATE=0.0004;THETA=0.0041;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 25182756 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0441;AVGPOST=0.9995;RSQ=0.9946;ERATE=0.0004;THETA=0.0027;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 25182941 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6620;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25183056 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0671;AVGPOST=0.9974;RSQ=0.9859;ERATE=0.0005;THETA=0.0012;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 25183092 rs113550375 CTAATTTT C 8114 PASS INDEL;BAVGPOST=0.995;BRSQ=0.952;LDAF=0.0515;AVGPOST=0.9976;RSQ=0.9805;ERATE=0.0006;THETA=0.0034;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 25183110 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0222;AVGPOST=0.9954;RSQ=0.9184;ERATE=0.0007;THETA=0.0015;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 25183119 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.959;BRSQ=0.767;LDAF=0.0811;AVGPOST=0.9609;RSQ=0.7977;ERATE=0.0008;THETA=0.0005;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 25183136 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.897;LDAF=0.0136;AVGPOST=0.9965;RSQ=0.8965;ERATE=0.0006;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 25183180 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.969;LDAF=0.0449;AVGPOST=0.9964;RSQ=0.9696;ERATE=0.0004;THETA=0.0048;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 25183181 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.589;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5001;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25183246 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0016;AVGPOST=0.9981;RSQ=0.6125;ERATE=0.0003;THETA=0.0040;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25183254 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25183353 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.962;LDAF=0.0773;AVGPOST=0.9924;RSQ=0.9636;ERATE=0.0015;THETA=0.0030;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 25183413 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0069;AVGPOST=0.9990;RSQ=0.9393;ERATE=0.0004;THETA=0.0033;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 25183454 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7702;ERATE=0.0004;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25183458 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0045;AVGPOST=0.9991;RSQ=0.9135;ERATE=0.0003;THETA=0.0064;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25183459 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4314;ERATE=0.0005;THETA=0.0040;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25183500 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0024;AVGPOST=0.9980;RSQ=0.6436;ERATE=0.0005;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25183501 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.1095;AVGPOST=0.9954;RSQ=0.9858;ERATE=0.0017;THETA=0.0070;AC=238;AN=2184 GT:DS:GL:BD 0.10897436 0
1 25183662 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0040;AVGPOST=0.9989;RSQ=0.8643;ERATE=0.0004;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25183676 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0733;AVGPOST=0.9968;RSQ=0.9841;ERATE=0.0005;THETA=0.0010;AC=159;AN=2184 GT:DS:GL:BD 0.07280220 0
1 25183701 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0018;AVGPOST=0.9979;RSQ=0.5349;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25183780 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0003;AVGPOST=0.9994;RSQ=0.0802;ERATE=0.0004;THETA=0.0045;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 25183795 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.518;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.5212;ERATE=0.0005;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25183819 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.744;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5763;ERATE=0.0004;THETA=0.0045;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25183829 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.551;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5584;ERATE=0.0004;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25183849 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6112;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25183853 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0169;AVGPOST=0.9987;RSQ=0.9650;ERATE=0.0005;THETA=0.0021;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 25183889 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0729;AVGPOST=0.9987;RSQ=0.9936;ERATE=0.0004;THETA=0.0013;AC=158;AN=2184 GT:DS:GL:BD 0.07234433 0
1 25183904 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0039;AVGPOST=0.9990;RSQ=0.9079;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25183933 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.984;LDAF=0.0714;AVGPOST=0.9985;RSQ=0.9921;ERATE=0.0004;THETA=0.0057;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 25183943 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5707;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25183976 rs60424992 AG A 20675 PASS INDEL;BAVGPOST=0.994;BRSQ=0.989;LDAF=0.3295;AVGPOST=0.9836;RSQ=0.9716;ERATE=0.0008;THETA=0.0012;AC=720;AN=2184 GT:DS:GL:BD 0.32967034 0
1 25183981 . GA G 1277 PASS INDEL;BAVGPOST=0.853;BRSQ=0.637;LDAF=0.2197;AVGPOST=0.8752;RSQ=0.7450;ERATE=0.0027;THETA=0.0012;AC=514;AN=2184 GT:DS:GL:BD 0.23534799 0
1 25184013 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0723;AVGPOST=0.9994;RSQ=0.9969;ERATE=0.0003;THETA=0.0035;AC=158;AN=2184 GT:DS:GL:BD 0.07234433 0
1 25184014 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.763;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4829;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25184057 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0721;AVGPOST=0.9990;RSQ=0.9956;ERATE=0.0003;THETA=0.0011;AC=158;AN=2184 GT:DS:GL:BD 0.07234433 0
1 25184117 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6199;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25184244 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0061;AVGPOST=0.9997;RSQ=0.9812;ERATE=0.0004;THETA=0.0038;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 25184258 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.910;LDAF=0.0222;AVGPOST=0.9965;RSQ=0.9373;ERATE=0.0005;THETA=0.0008;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 25184267 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25184269 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3416;AVGPOST=0.9969;RSQ=0.9941;ERATE=0.0005;THETA=0.0008;AC=745;AN=2184 GT:DS:GL:BD 0.34111720 0
1 25184273 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0165;AVGPOST=0.9992;RSQ=0.9805;ERATE=0.0003;THETA=0.0011;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 25184290 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0422;AVGPOST=0.9993;RSQ=0.9927;ERATE=0.0003;THETA=0.0003;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 25184292 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3423;AVGPOST=0.9974;RSQ=0.9950;ERATE=0.0005;THETA=0.0009;AC=745;AN=2184 GT:DS:GL:BD 0.34111720 0
1 25184356 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0654;AVGPOST=0.9994;RSQ=0.9965;ERATE=0.0003;THETA=0.0008;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 25184378 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0037;AVGPOST=0.9996;RSQ=0.9503;ERATE=0.0004;THETA=0.0022;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25184440 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0168;AVGPOST=0.9993;RSQ=0.9860;ERATE=0.0003;THETA=0.0018;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 25184480 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3672;AVGPOST=0.9964;RSQ=0.9938;ERATE=0.0005;THETA=0.0013;AC=800;AN=2184 GT:DS:GL:BD 0.36630037 0
1 25184498 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.622;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7580;ERATE=0.0006;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25184568 . T TC 656 PASS INDEL;BAVGPOST=0.996;BRSQ=0.894;LDAF=0.0170;AVGPOST=0.9956;RSQ=0.9022;ERATE=0.0006;THETA=0.0010;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 25184609 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.903;LDAF=0.0039;AVGPOST=0.9990;RSQ=0.8816;ERATE=0.0005;THETA=0.0023;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25184718 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.3449;AVGPOST=0.9957;RSQ=0.9917;ERATE=0.0007;THETA=0.0003;AC=754;AN=2184 GT:DS:GL:BD 0.34523809 0
1 25184753 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.757;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6525;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25184959 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6651;ERATE=0.0003;THETA=0.0044;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25184993 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8302;ERATE=0.0004;THETA=0.0037;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25185025 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25185197 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.3405;AVGPOST=0.9927;RSQ=0.9876;ERATE=0.0009;THETA=0.0172;AC=741;AN=2184 GT:DS:GL:BD 0.33928570 0
1 25185226 . TTTTG T 1156 PASS INDEL;BAVGPOST=0.997;BRSQ=0.896;LDAF=0.0147;AVGPOST=0.9942;RSQ=0.8231;ERATE=0.0031;THETA=0.0104;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 25185274 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.455;LDAF=0.9791;AVGPOST=0.9737;RSQ=0.5260;ERATE=0.0044;THETA=0.0027;AC=2153;AN=2184 GT:DS:GL:BD 0.98580587 1
1 25185283 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.709;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4858;ERATE=0.0006;THETA=0.0099;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25185382 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0093;AVGPOST=0.9987;RSQ=0.9368;ERATE=0.0004;THETA=0.0122;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 25185532 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8176;ERATE=0.0003;THETA=0.0215;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25185554 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0004;THETA=0.0290;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25185567 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0037;AVGPOST=0.9985;RSQ=0.8458;ERATE=0.0004;THETA=0.0138;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25185669 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.953;LDAF=0.0455;AVGPOST=0.9908;RSQ=0.9304;ERATE=0.0015;THETA=0.0127;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 25185677 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.890;LDAF=0.0294;AVGPOST=0.9900;RSQ=0.8580;ERATE=0.0006;THETA=0.0225;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 25185707 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.927;BRSQ=0.838;LDAF=0.2630;AVGPOST=0.9177;RSQ=0.8451;ERATE=0.0317;THETA=0.0139;AC=536;AN=2184 GT:DS:GL:BD 0.24542125 0
1 25185709 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9996;AVGPOST=0.9992;RSQ=0.0548;ERATE=0.0004;THETA=0.0098;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 25185717 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.782;LDAF=0.0421;AVGPOST=0.9788;RSQ=0.8123;ERATE=0.0010;THETA=0.0244;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 25185719 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.922;LDAF=0.0480;AVGPOST=0.9861;RSQ=0.8942;ERATE=0.0038;THETA=0.0152;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 25185786 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.960;BRSQ=0.833;LDAF=0.1322;AVGPOST=0.9436;RSQ=0.8077;ERATE=0.0121;THETA=0.0291;AC=242;AN=2184 GT:DS:GL:BD 0.11080586 0
1 25185802 . C CA 132 PASS INDEL;BAVGPOST=0.999;BRSQ=0.742;LDAF=0.0045;AVGPOST=0.9952;RSQ=0.5642;ERATE=0.0007;THETA=0.0278;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25185835 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.6973;ERATE=0.0003;THETA=0.0305;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25185856 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.812;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8109;ERATE=0.0007;THETA=0.0142;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25185935 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.8098;ERATE=0.0004;THETA=0.0170;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25186069 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.950;LDAF=0.3831;AVGPOST=0.9654;RSQ=0.9464;ERATE=0.0013;THETA=0.0110;AC=827;AN=2184 GT:DS:GL:BD 0.37866300 0
1 25186141 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.948;LDAF=0.0306;AVGPOST=0.9954;RSQ=0.9391;ERATE=0.0010;THETA=0.0058;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 25186151 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.951;LDAF=0.3128;AVGPOST=0.9612;RSQ=0.9318;ERATE=0.0041;THETA=0.0013;AC=669;AN=2184 GT:DS:GL:BD 0.30631867 0
1 25186206 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.659;LDAF=0.0047;AVGPOST=0.9939;RSQ=0.4612;ERATE=0.0017;THETA=0.0197;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25186242 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.958;LDAF=0.2717;AVGPOST=0.9441;RSQ=0.8927;ERATE=0.0075;THETA=0.0016;AC=574;AN=2184 GT:DS:GL:BD 0.26282051 0
1 25186301 . A AG 71 PASS INDEL;BAVGPOST=0.994;BRSQ=0.662;LDAF=0.0131;AVGPOST=0.9854;RSQ=0.5173;ERATE=0.0056;THETA=0.0067;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 25186400 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0342;AVGPOST=0.9948;RSQ=0.9470;ERATE=0.0006;THETA=0.0011;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 25186410 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.989;LDAF=0.2846;AVGPOST=0.9901;RSQ=0.9820;ERATE=0.0007;THETA=0.0008;AC=620;AN=2184 GT:DS:GL:BD 0.28388280 0
1 25186455 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.588;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.5750;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25186463 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.675;LDAF=0.0034;AVGPOST=0.9963;RSQ=0.5692;ERATE=0.0006;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25186502 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5670;ERATE=0.0004;THETA=0.0061;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25186503 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.6174;ERATE=0.0006;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25186653 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.737;LDAF=0.0144;AVGPOST=0.9913;RSQ=0.7512;ERATE=0.0007;THETA=0.0053;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 25186695 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.984;LDAF=0.2468;AVGPOST=0.9933;RSQ=0.9860;ERATE=0.0006;THETA=0.0050;AC=537;AN=2184 GT:DS:GL:BD 0.24587911 0
1 25186716 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.3555;AVGPOST=0.9899;RSQ=0.9847;ERATE=0.0011;THETA=0.0005;AC=775;AN=2184 GT:DS:GL:BD 0.35485348 0
1 25186821 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.969;LDAF=0.6725;AVGPOST=0.9682;RSQ=0.9439;ERATE=0.0065;THETA=0.0005;AC=1480;AN=2184 GT:DS:GL:BD 0.67765570 1
1 25186835 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.901;LDAF=0.0074;AVGPOST=0.9968;RSQ=0.8362;ERATE=0.0005;THETA=0.0011;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 25186938 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.901;LDAF=0.0094;AVGPOST=0.9942;RSQ=0.7364;ERATE=0.0007;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 25187072 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.755;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6082;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25187120 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6617;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25187149 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.971;LDAF=0.2814;AVGPOST=0.9944;RSQ=0.9898;ERATE=0.0007;THETA=0.0006;AC=613;AN=2184 GT:DS:GL:BD 0.28067765 0
1 25187331 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.869;LDAF=0.0199;AVGPOST=0.9942;RSQ=0.8824;ERATE=0.0004;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 25187433 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25187487 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0289;AVGPOST=0.9962;RSQ=0.9524;ERATE=0.0007;THETA=0.0010;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 25187503 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.573;LDAF=0.0038;AVGPOST=0.9950;RSQ=0.5285;ERATE=0.0009;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25187538 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.387;LDAF=0.0017;AVGPOST=0.9978;RSQ=0.5320;ERATE=0.0004;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25187557 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.965;LDAF=0.6693;AVGPOST=0.9934;RSQ=0.9873;ERATE=0.0010;THETA=0.0016;AC=1465;AN=2184 GT:DS:GL:BD 0.67078757 1
1 25187558 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.960;LDAF=0.3042;AVGPOST=0.9885;RSQ=0.9794;ERATE=0.0008;THETA=0.0013;AC=669;AN=2184 GT:DS:GL:BD 0.30631867 0
1 25187611 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2909;AVGPOST=0.9989;RSQ=0.9978;ERATE=0.0004;THETA=0.0002;AC=635;AN=2184 GT:DS:GL:BD 0.29075092 0
1 25187622 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2933;AVGPOST=0.9983;RSQ=0.9964;ERATE=0.0006;THETA=0.0004;AC=640;AN=2184 GT:DS:GL:BD 0.29304031 0
1 25187643 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9058;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25187795 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2919;AVGPOST=0.9996;RSQ=0.9991;ERATE=0.0004;THETA=0.0015;AC=637;AN=2184 GT:DS:GL:BD 0.29166666 0
1 25187805 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.9972;AVGPOST=0.9995;RSQ=0.9223;ERATE=0.0004;THETA=0.0004;AC=2178;AN=2184 GT:DS:GL:BD 0.99725276 1
1 25187813 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6465;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25187817 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0092;AVGPOST=0.9999;RSQ=0.9928;ERATE=0.0003;THETA=0.0007;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 25187878 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2924;AVGPOST=0.9994;RSQ=0.9987;ERATE=0.0004;THETA=0.0005;AC=638;AN=2184 GT:DS:GL:BD 0.29212454 0
1 25187903 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25187908 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7921;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25187920 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9294;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25187952 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2923;AVGPOST=0.9990;RSQ=0.9981;ERATE=0.0004;THETA=0.0003;AC=638;AN=2184 GT:DS:GL:BD 0.29212454 0
1 25187957 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25188046 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0095;AVGPOST=0.9992;RSQ=0.9635;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 25188064 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.3050;AVGPOST=0.9970;RSQ=0.9949;ERATE=0.0004;THETA=0.0004;AC=665;AN=2184 GT:DS:GL:BD 0.30448717 0
1 25188127 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3588;AVGPOST=0.9968;RSQ=0.9945;ERATE=0.0007;THETA=0.0002;AC=784;AN=2184 GT:DS:GL:BD 0.35897437 0
1 25188181 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0291;AVGPOST=0.9994;RSQ=0.9916;ERATE=0.0004;THETA=0.0009;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 25188202 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2938;AVGPOST=0.9979;RSQ=0.9962;ERATE=0.0005;THETA=0.0005;AC=639;AN=2184 GT:DS:GL:BD 0.29258242 0
1 25188207 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6259;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25188238 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.728;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7196;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25188308 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.850;LDAF=0.0027;AVGPOST=0.9984;RSQ=0.7421;ERATE=0.0005;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25188324 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8557;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25188334 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.640;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6224;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25188338 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.680;LDAF=0.0020;AVGPOST=0.9973;RSQ=0.5062;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25188340 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.537;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4540;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25188381 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.2934;AVGPOST=0.9978;RSQ=0.9954;ERATE=0.0006;THETA=0.0005;AC=639;AN=2184 GT:DS:GL:BD 0.29258242 0
1 25188395 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2924;AVGPOST=0.9964;RSQ=0.9932;ERATE=0.0006;THETA=0.0014;AC=637;AN=2184 GT:DS:GL:BD 0.29166666 0
1 25188483 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.836;LDAF=0.0052;AVGPOST=0.9961;RSQ=0.6982;ERATE=0.0004;THETA=0.0024;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25188534 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8107;ERATE=0.0004;THETA=0.0025;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25188765 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5762;ERATE=0.0005;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25188881 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9687;AVGPOST=0.9994;RSQ=0.9937;ERATE=0.0003;THETA=0.0007;AC=2116;AN=2184 GT:DS:GL:BD 0.96886444 1
1 25188940 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2585;AVGPOST=0.9988;RSQ=0.9978;ERATE=0.0003;THETA=0.0005;AC=564;AN=2184 GT:DS:GL:BD 0.25824177 0
1 25188956 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6406;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25188968 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25188993 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2583;AVGPOST=0.9984;RSQ=0.9968;ERATE=0.0004;THETA=0.0005;AC=564;AN=2184 GT:DS:GL:BD 0.25824177 0
1 25189121 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9988;RSQ=0.8583;ERATE=0.0004;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25189154 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25189212 . C CT 2503 PASS INDEL;BAVGPOST=0.896;BRSQ=0.790;LDAF=0.3611;AVGPOST=0.8800;RSQ=0.8018;ERATE=0.0058;THETA=0.0004;AC=790;AN=2184 GT:DS:GL:BD 0.36172161 0
1 25189216 . C CA 2599 PASS INDEL;BAVGPOST=0.905;BRSQ=0.812;LDAF=0.3555;AVGPOST=0.8917;RSQ=0.8225;ERATE=0.0016;THETA=0.0002;AC=782;AN=2184 GT:DS:GL:BD 0.35805860 0
1 25189217 . C CA 5277 PASS INDEL;BAVGPOST=0.905;BRSQ=0.811;LDAF=0.3541;AVGPOST=0.8878;RSQ=0.8169;ERATE=0.0023;THETA=0.0011;AC=783;AN=2184 GT:DS:GL:BD 0.35851648 0
1 25189285 . TG T 28 PASS INDEL;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.5580;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25189302 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2550;AVGPOST=0.9976;RSQ=0.9953;ERATE=0.0005;THETA=0.0011;AC=558;AN=2184 GT:DS:GL:BD 0.25549451 0
1 25189333 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25189373 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9553;ERATE=0.0003;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25189377 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.981;LDAF=0.2619;AVGPOST=0.9945;RSQ=0.9890;ERATE=0.0009;THETA=0.0003;AC=570;AN=2184 GT:DS:GL:BD 0.26098901 0
1 25189413 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.826;LDAF=0.0063;AVGPOST=0.9974;RSQ=0.8544;ERATE=0.0007;THETA=0.0028;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25189414 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0092;AVGPOST=0.9998;RSQ=0.9912;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 25189423 . AG A 320 PASS INDEL;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0057;AVGPOST=0.9984;RSQ=0.8675;ERATE=0.0006;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25189448 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0091;AVGPOST=0.9998;RSQ=0.9881;ERATE=0.0003;THETA=0.0010;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 25189463 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.699;LDAF=0.0020;AVGPOST=0.9984;RSQ=0.6696;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25189491 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2553;AVGPOST=0.9962;RSQ=0.9926;ERATE=0.0008;THETA=0.0005;AC=557;AN=2184 GT:DS:GL:BD 0.25503662 0
1 25189526 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.942;LDAF=0.0210;AVGPOST=0.9952;RSQ=0.8999;ERATE=0.0003;THETA=0.0005;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 25189549 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0082;AVGPOST=0.9987;RSQ=0.9311;ERATE=0.0005;THETA=0.0008;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 25189787 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7078;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25189802 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2466;AVGPOST=0.9959;RSQ=0.9908;ERATE=0.0005;THETA=0.0030;AC=540;AN=2184 GT:DS:GL:BD 0.24725275 0
1 25189876 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0032;AVGPOST=0.9983;RSQ=0.7630;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25189963 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.750;LDAF=0.0083;AVGPOST=0.9944;RSQ=0.7319;ERATE=0.0011;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 25190040 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9670;ERATE=0.0003;THETA=0.0052;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25190197 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.9096;AVGPOST=0.9979;RSQ=0.9919;ERATE=0.0004;THETA=0.0003;AC=1988;AN=2184 GT:DS:GL:BD 0.91025639 1
1 25190201 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.9085;AVGPOST=0.9958;RSQ=0.9836;ERATE=0.0007;THETA=0.0007;AC=1988;AN=2184 GT:DS:GL:BD 0.91025639 1
1 25190366 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0588;AVGPOST=0.9955;RSQ=0.9759;ERATE=0.0004;THETA=0.0063;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 25190527 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.2997;AVGPOST=0.9939;RSQ=0.9880;ERATE=0.0010;THETA=0.0006;AC=653;AN=2184 GT:DS:GL:BD 0.29899266 0
1 25190571 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.862;LDAF=0.0128;AVGPOST=0.9963;RSQ=0.8833;ERATE=0.0004;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 25190615 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6752;AVGPOST=0.9978;RSQ=0.9955;ERATE=0.0005;THETA=0.0010;AC=1475;AN=2184 GT:DS:GL:BD 0.67536628 1
1 25190661 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.8091;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25190686 . CAT C 178 PASS INDEL;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8371;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25190699 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25190700 . TGC T 1461 PASS INDEL;BAVGPOST=0.977;BRSQ=0.765;LDAF=0.0554;AVGPOST=0.9650;RSQ=0.7458;ERATE=0.0108;THETA=0.0016;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 25190702 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3268;AVGPOST=0.9976;RSQ=0.9956;ERATE=0.0005;THETA=0.0016;AC=714;AN=2184 GT:DS:GL:BD 0.32692307 0
1 25190712 . CATGT C 10426 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0361;AVGPOST=0.9965;RSQ=0.9666;ERATE=0.0010;THETA=0.0006;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 25190733 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.662;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25190747 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9322;ERATE=0.0005;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25190756 . TGTGTGTGC T 15786 PASS INDEL;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0480;AVGPOST=0.9984;RSQ=0.9898;ERATE=0.0003;THETA=0.0002;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 25190788 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2860;AVGPOST=0.9980;RSQ=0.9962;ERATE=0.0004;THETA=0.0005;AC=625;AN=2184 GT:DS:GL:BD 0.28617215 0
1 25190792 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.991;LDAF=0.2860;AVGPOST=0.9977;RSQ=0.9955;ERATE=0.0004;THETA=0.0002;AC=625;AN=2184 GT:DS:GL:BD 0.28617215 0
1 25190803 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3973;AVGPOST=0.9979;RSQ=0.9968;ERATE=0.0004;THETA=0.0012;AC=869;AN=2184 GT:DS:GL:BD 0.39789379 0
1 25190881 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.756;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8821;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25190935 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6913;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25191141 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0471;AVGPOST=0.9992;RSQ=0.9954;ERATE=0.0003;THETA=0.0004;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 25191310 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.625;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4704;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25191343 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.9970;AVGPOST=0.9994;RSQ=0.9141;ERATE=0.0003;THETA=0.0007;AC=2178;AN=2184 GT:DS:GL:BD 0.99725276 1
1 25191388 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0226;AVGPOST=0.9989;RSQ=0.9795;ERATE=0.0004;THETA=0.0021;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 25191620 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.641;LDAF=0.0026;AVGPOST=0.9978;RSQ=0.6499;ERATE=0.0007;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25191715 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4839;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25191740 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8292;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25191831 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25191853 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.754;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6208;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25191862 . GGAAT G 233 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0032;AVGPOST=0.9995;RSQ=0.9322;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25191866 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25191883 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7406;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25192012 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.945;LDAF=0.0161;AVGPOST=0.9987;RSQ=0.9685;ERATE=0.0003;THETA=0.0002;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 25192063 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8544;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25192091 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0048;AVGPOST=0.9974;RSQ=0.8043;ERATE=0.0004;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25192230 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0074;AVGPOST=0.9997;RSQ=0.9826;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 25192268 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0255;AVGPOST=0.9993;RSQ=0.9862;ERATE=0.0005;THETA=0.0002;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 25192376 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.750;LDAF=0.0016;AVGPOST=0.9976;RSQ=0.3757;ERATE=0.0004;THETA=0.0038;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25192405 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.964;LDAF=0.6149;AVGPOST=0.9798;RSQ=0.9667;ERATE=0.0030;THETA=0.0004;AC=1351;AN=2184 GT:DS:GL:BD 0.61858976 1
1 25192494 rs71760129 CAACA C 22837 PASS INDEL;BAVGPOST=0.983;BRSQ=0.966;LDAF=0.3825;AVGPOST=0.9713;RSQ=0.9535;ERATE=0.0030;THETA=0.0006;AC=839;AN=2184 GT:DS:GL:BD 0.38415751 0
1 25192550 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.755;LDAF=0.0020;AVGPOST=0.9994;RSQ=0.8720;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25192559 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.986;LDAF=0.3845;AVGPOST=0.9951;RSQ=0.9919;ERATE=0.0005;THETA=0.0016;AC=842;AN=2184 GT:DS:GL:BD 0.38553113 0
1 25192622 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5095;ERATE=0.0004;THETA=0.0060;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25192642 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.4008;AVGPOST=0.9931;RSQ=0.9901;ERATE=0.0007;THETA=0.0011;AC=876;AN=2184 GT:DS:GL:BD 0.40109891 0
1 25192652 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0758;AVGPOST=0.9968;RSQ=0.9844;ERATE=0.0004;THETA=0.0003;AC=165;AN=2184 GT:DS:GL:BD 0.07554945 0
1 25192715 . A AT 27668 PASS INDEL;BAVGPOST=0.993;BRSQ=0.986;LDAF=0.3227;AVGPOST=0.9906;RSQ=0.9829;ERATE=0.0013;THETA=0.0005;AC=704;AN=2184 GT:DS:GL:BD 0.32234433 0
1 25192837 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7014;AVGPOST=0.9973;RSQ=0.9950;ERATE=0.0006;THETA=0.0018;AC=1533;AN=2184 GT:DS:GL:BD 0.70192307 1
1 25192838 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.960;LDAF=0.0214;AVGPOST=0.9995;RSQ=0.9877;ERATE=0.0004;THETA=0.0008;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 25192861 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8036;ERATE=0.0003;THETA=0.0122;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25192960 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9560;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25193009 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.5649;AVGPOST=0.9928;RSQ=0.9886;ERATE=0.0015;THETA=0.0025;AC=1234;AN=2184 GT:DS:GL:BD 0.56501830 1
1 25193052 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0030;AVGPOST=0.9993;RSQ=0.8901;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25193053 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.7002;ERATE=0.0008;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25193133 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5345;ERATE=0.0006;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25193138 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0101;AVGPOST=0.9990;RSQ=0.9580;ERATE=0.0004;THETA=0.0093;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 25193155 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.6742;AVGPOST=0.9959;RSQ=0.9929;ERATE=0.0005;THETA=0.0079;AC=1475;AN=2184 GT:DS:GL:BD 0.67536628 1
1 25193199 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.985;LDAF=0.3283;AVGPOST=0.9890;RSQ=0.9812;ERATE=0.0035;THETA=0.0004;AC=716;AN=2184 GT:DS:GL:BD 0.32783884 0
1 25193267 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.9886;AVGPOST=0.9992;RSQ=0.9696;ERATE=0.0003;THETA=0.0003;AC=2161;AN=2184 GT:DS:GL:BD 0.98946887 1
1 25193278 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.966;LDAF=0.3239;AVGPOST=0.9786;RSQ=0.9620;ERATE=0.0103;THETA=0.0019;AC=704;AN=2184 GT:DS:GL:BD 0.32234433 0
1 25193288 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.921;LDAF=0.0258;AVGPOST=0.9951;RSQ=0.9319;ERATE=0.0007;THETA=0.0058;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 25193293 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0022;AVGPOST=0.9974;RSQ=0.5563;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25193302 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7197;ERATE=0.0008;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25193328 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25193419 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25193456 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0067;AVGPOST=0.9984;RSQ=0.9136;ERATE=0.0004;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 25193468 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.790;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8625;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25193470 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25193551 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0034;AVGPOST=0.9979;RSQ=0.7775;ERATE=0.0009;THETA=0.0046;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25193563 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0209;AVGPOST=0.9993;RSQ=0.9845;ERATE=0.0003;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 25193578 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25193659 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8651;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25193699 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9406;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25193703 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0031;AVGPOST=0.9984;RSQ=0.7888;ERATE=0.0005;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25193709 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6904;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25193719 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0029;AVGPOST=0.9970;RSQ=0.6375;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25193752 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0072;AVGPOST=0.9988;RSQ=0.9396;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 25193814 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.964;LDAF=0.0679;AVGPOST=0.9960;RSQ=0.9757;ERATE=0.0004;THETA=0.0024;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 25193824 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.731;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25193857 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0095;AVGPOST=0.9991;RSQ=0.9681;ERATE=0.0006;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 25193864 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8657;ERATE=0.0003;THETA=0.0056;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25193877 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0036;AVGPOST=0.9990;RSQ=0.8776;ERATE=0.0004;THETA=0.0027;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25193893 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0067;AVGPOST=0.9993;RSQ=0.9589;ERATE=0.0004;THETA=0.0008;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 25193927 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.972;LDAF=0.3893;AVGPOST=0.9833;RSQ=0.9720;ERATE=0.0030;THETA=0.0003;AC=846;AN=2184 GT:DS:GL:BD 0.38736263 0
1 25193937 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8902;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25194030 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6584;ERATE=0.0003;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25194060 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2682;AVGPOST=0.9945;RSQ=0.9901;ERATE=0.0005;THETA=0.0005;AC=584;AN=2184 GT:DS:GL:BD 0.26739928 0
1 25194071 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.846;LDAF=0.0043;AVGPOST=0.9977;RSQ=0.7878;ERATE=0.0004;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25194291 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0031;AVGPOST=0.9984;RSQ=0.8058;ERATE=0.0004;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25194299 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.3024;AVGPOST=0.9970;RSQ=0.9942;ERATE=0.0003;THETA=0.0002;AC=661;AN=2184 GT:DS:GL:BD 0.30265567 0
1 25194578 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7674;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25194627 . C CTAAA 2112 PASS INDEL;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0080;AVGPOST=0.9985;RSQ=0.9170;ERATE=0.0005;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 25194700 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.6536;AVGPOST=0.9938;RSQ=0.9897;ERATE=0.0005;THETA=0.0005;AC=1425;AN=2184 GT:DS:GL:BD 0.65247256 1
1 25194754 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8705;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25194897 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0022;AVGPOST=0.9987;RSQ=0.7405;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25195011 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25195029 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.850;LDAF=0.0080;AVGPOST=0.9973;RSQ=0.8571;ERATE=0.0005;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 25195213 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0288;AVGPOST=0.9992;RSQ=0.9891;ERATE=0.0004;THETA=0.0007;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 25195286 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25195365 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0020;AVGPOST=0.9978;RSQ=0.5640;ERATE=0.0004;THETA=0.0042;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25195496 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.2834;AVGPOST=0.9920;RSQ=0.9844;ERATE=0.0010;THETA=0.0017;AC=620;AN=2184 GT:DS:GL:BD 0.28388280 0
1 25195499 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.972;LDAF=0.0320;AVGPOST=0.9975;RSQ=0.9649;ERATE=0.0005;THETA=0.0004;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 25195507 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.717;LDAF=0.0009;AVGPOST=0.9986;RSQ=0.3268;ERATE=0.0005;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25195590 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0035;AVGPOST=0.9992;RSQ=0.8983;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25195652 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5782;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25195708 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25195749 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0034;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25195954 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.580;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7115;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25195964 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.975;LDAF=0.0307;AVGPOST=0.9980;RSQ=0.9724;ERATE=0.0004;THETA=0.0007;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 25195982 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.813;LDAF=0.0071;AVGPOST=0.9984;RSQ=0.9030;ERATE=0.0004;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 25196006 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0031;AVGPOST=0.9984;RSQ=0.7868;ERATE=0.0010;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25196370 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.978;LDAF=0.3344;AVGPOST=0.9796;RSQ=0.9672;ERATE=0.0031;THETA=0.0050;AC=726;AN=2184 GT:DS:GL:BD 0.33241758 0
1 25196478 . C CG 98 PASS INDEL;BAVGPOST=0.992;BRSQ=0.434;LDAF=0.0112;AVGPOST=0.9841;RSQ=0.4200;ERATE=0.0008;THETA=0.0011;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25196480 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.908;BRSQ=0.759;LDAF=0.2590;AVGPOST=0.8943;RSQ=0.7776;ERATE=0.0099;THETA=0.0014;AC=561;AN=2184 GT:DS:GL:BD 0.25686812 0
1 25196483 . CG C 379 PASS INDEL;BAVGPOST=0.825;BRSQ=0.215;LDAF=0.2041;AVGPOST=0.7321;RSQ=0.3209;ERATE=0.0303;THETA=0.0032;AC=228;AN=2184 GT:DS:GL:BD 0.10439561 0
1 25196540 . C CTT 18 PASS INDEL;BAVGPOST=0.999;BRSQ=0.624;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.3705;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25196554 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0029;AVGPOST=0.9988;RSQ=0.8381;ERATE=0.0004;THETA=0.0025;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25196590 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8476;ERATE=0.0007;THETA=0.0027;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25196648 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0100;AVGPOST=0.9986;RSQ=0.9392;ERATE=0.0006;THETA=0.0047;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 25196873 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.881;LDAF=0.0146;AVGPOST=0.9935;RSQ=0.8303;ERATE=0.0005;THETA=0.0007;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 25196950 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.976;LDAF=0.0724;AVGPOST=0.9938;RSQ=0.9676;ERATE=0.0004;THETA=0.0108;AC=159;AN=2184 GT:DS:GL:BD 0.07280220 0
1 25197049 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.979;LDAF=0.0699;AVGPOST=0.9942;RSQ=0.9691;ERATE=0.0006;THETA=0.0093;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 25197108 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.972;LDAF=0.0216;AVGPOST=0.9946;RSQ=0.9062;ERATE=0.0006;THETA=0.0015;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 25197155 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.976;LDAF=0.4521;AVGPOST=0.9846;RSQ=0.9748;ERATE=0.0012;THETA=0.0064;AC=986;AN=2184 GT:DS:GL:BD 0.45146519 0
1 25197269 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.691;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6259;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25197277 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.746;LDAF=0.0108;AVGPOST=0.9931;RSQ=0.7426;ERATE=0.0004;THETA=0.0023;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 25197357 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.840;LDAF=0.0532;AVGPOST=0.9712;RSQ=0.7824;ERATE=0.0076;THETA=0.0023;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 25197387 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0030;AVGPOST=0.9977;RSQ=0.6955;ERATE=0.0004;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25197409 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6996;ERATE=0.0003;THETA=0.0054;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25197548 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0084;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25197577 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.731;LDAF=0.0022;AVGPOST=0.9981;RSQ=0.6939;ERATE=0.0004;THETA=0.0063;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25197586 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.984;LDAF=0.4284;AVGPOST=0.9889;RSQ=0.9820;ERATE=0.0006;THETA=0.0098;AC=933;AN=2184 GT:DS:GL:BD 0.42719781 0
1 25197613 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.4886;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25197685 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.985;LDAF=0.2358;AVGPOST=0.9905;RSQ=0.9802;ERATE=0.0014;THETA=0.0032;AC=514;AN=2184 GT:DS:GL:BD 0.23534799 0
1 25197969 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5953;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25197996 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.825;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8096;ERATE=0.0004;THETA=0.0100;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25198182 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1824;AVGPOST=0.9978;RSQ=0.9932;ERATE=0.0005;THETA=0.0027;AC=397;AN=2184 GT:DS:GL:BD 0.18177655 0
1 25198235 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25198236 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.6125;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25198352 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25198369 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7568;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25198437 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0050;AVGPOST=0.9990;RSQ=0.9137;ERATE=0.0004;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25198537 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.771;LDAF=0.0040;AVGPOST=0.9986;RSQ=0.8453;ERATE=0.0004;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25198575 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.6872;AVGPOST=0.9945;RSQ=0.9907;ERATE=0.0004;THETA=0.0005;AC=1505;AN=2184 GT:DS:GL:BD 0.68910259 1
1 25198651 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25198683 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.689;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25198775 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7477;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25198810 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.761;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6571;ERATE=0.0004;THETA=0.0062;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25198884 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25198991 . TA T 67 PASS INDEL;BAVGPOST=1.000;BRSQ=0.718;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5065;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25199154 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25199237 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9568;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25199282 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3808;AVGPOST=0.9977;RSQ=0.9963;ERATE=0.0006;THETA=0.0003;AC=833;AN=2184 GT:DS:GL:BD 0.38141027 0
1 25199416 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0197;AVGPOST=0.9998;RSQ=0.9944;ERATE=0.0003;THETA=0.0002;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 25199499 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2420;AVGPOST=0.9983;RSQ=0.9962;ERATE=0.0004;THETA=0.0003;AC=529;AN=2184 GT:DS:GL:BD 0.24221611 0
1 25199722 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2152;AVGPOST=0.9990;RSQ=0.9979;ERATE=0.0003;THETA=0.0004;AC=470;AN=2184 GT:DS:GL:BD 0.21520147 0
1 25199951 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.545;LDAF=0.0022;AVGPOST=0.9966;RSQ=0.3190;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25200019 . TA T 117 PASS INDEL;BAVGPOST=0.999;BRSQ=0.693;LDAF=0.0069;AVGPOST=0.9926;RSQ=0.6028;ERATE=0.0007;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25200020 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.925;LDAF=0.0359;AVGPOST=0.9894;RSQ=0.8931;ERATE=0.0012;THETA=0.0003;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 25200027 rs57394752 C CAT 22630 PASS INDEL;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.2372;AVGPOST=0.9899;RSQ=0.9786;ERATE=0.0021;THETA=0.0006;AC=516;AN=2184 GT:DS:GL:BD 0.23626374 0
1 25200037 . TC T 184 PASS INDEL;BAVGPOST=0.998;BRSQ=0.859;LDAF=0.0042;AVGPOST=0.9958;RSQ=0.5687;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25200046 . A AT 153 PASS INDEL;BAVGPOST=0.997;BRSQ=0.820;LDAF=0.0029;AVGPOST=0.9981;RSQ=0.7220;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25200049 . A AT 10 PASS INDEL;BAVGPOST=0.997;BRSQ=0.827;LDAF=0.0075;AVGPOST=0.9947;RSQ=0.6889;ERATE=0.0011;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25200050 . T TC 126 PASS INDEL;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0048;AVGPOST=0.9950;RSQ=0.5876;ERATE=0.0006;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25200059 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4070;ERATE=0.0007;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25200067 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.981;LDAF=0.0316;AVGPOST=0.9983;RSQ=0.9778;ERATE=0.0005;THETA=0.0002;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 25200067 . AATGCATCATATAT A 350 PASS INDEL;BAVGPOST=0.998;BRSQ=0.606;LDAF=0.0076;AVGPOST=0.9877;RSQ=0.3230;ERATE=0.0026;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25200071 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0031;AVGPOST=0.9974;RSQ=0.6626;ERATE=0.0006;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25200083 . GCAT G 1598 PASS INDEL;BAVGPOST=0.996;BRSQ=0.934;LDAF=0.0335;AVGPOST=0.9920;RSQ=0.9034;ERATE=0.0006;THETA=0.0004;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 25200087 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0027;AVGPOST=0.9972;RSQ=0.6320;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25200103 . TATG T 407 PASS INDEL;BAVGPOST=0.997;BRSQ=0.883;LDAF=0.0112;AVGPOST=0.9935;RSQ=0.7783;ERATE=0.0005;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 25200246 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4001;AVGPOST=0.9979;RSQ=0.9960;ERATE=0.0005;THETA=0.0004;AC=875;AN=2184 GT:DS:GL:BD 0.40064102 0
1 25200275 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0024;AVGPOST=0.9965;RSQ=0.4799;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25200281 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.758;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6331;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25200518 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.411;LDAF=0.0065;AVGPOST=0.9930;RSQ=0.5462;ERATE=0.0009;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25200521 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.734;LDAF=0.0077;AVGPOST=0.9968;RSQ=0.8257;ERATE=0.0004;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 25200570 . A AT 122 PASS INDEL;BAVGPOST=0.975;BRSQ=0.131;LDAF=0.0373;AVGPOST=0.9444;RSQ=0.3467;ERATE=0.0033;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 25200579 . CTG C 885 PASS INDEL;BAVGPOST=0.997;BRSQ=0.877;LDAF=0.0074;AVGPOST=0.9975;RSQ=0.8576;ERATE=0.0012;THETA=0.0010;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 25200638 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7417;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25200702 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0075;AVGPOST=0.9995;RSQ=0.9708;ERATE=0.0004;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 25200740 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0031;AVGPOST=0.9967;RSQ=0.6098;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25200775 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0029;AVGPOST=0.9998;RSQ=0.9626;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25200813 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2087;AVGPOST=0.9995;RSQ=0.9984;ERATE=0.0003;THETA=0.0010;AC=456;AN=2184 GT:DS:GL:BD 0.20879121 0
1 25200865 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0035;AVGPOST=0.9963;RSQ=0.6196;ERATE=0.0006;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25200866 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2077;AVGPOST=0.9994;RSQ=0.9984;ERATE=0.0003;THETA=0.0015;AC=453;AN=2184 GT:DS:GL:BD 0.20741758 0
1 25200875 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0008;AVGPOST=0.9989;RSQ=0.4464;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25200998 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0210;AVGPOST=0.9972;RSQ=0.9530;ERATE=0.0004;THETA=0.0007;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 25201014 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.980;LDAF=0.1824;AVGPOST=0.9974;RSQ=0.9926;ERATE=0.0005;THETA=0.0002;AC=399;AN=2184 GT:DS:GL:BD 0.18269230 0
1 25201018 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.983;LDAF=0.2337;AVGPOST=0.9973;RSQ=0.9936;ERATE=0.0007;THETA=0.0006;AC=511;AN=2184 GT:DS:GL:BD 0.23397435 0
1 25201087 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6599;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25201136 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0023;AVGPOST=0.9978;RSQ=0.6404;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25201180 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0149;AVGPOST=0.9984;RSQ=0.9602;ERATE=0.0004;THETA=0.0007;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 25201367 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0257;AVGPOST=0.9997;RSQ=0.9941;ERATE=0.0004;THETA=0.0003;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 25201394 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8403;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25201407 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.538;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.6026;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25201564 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.875;LDAF=0.0103;AVGPOST=0.9976;RSQ=0.9114;ERATE=0.0004;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 25201599 rs113467696 T TCGATGTGA 24988 PASS INDEL;BAVGPOST=0.995;BRSQ=0.986;LDAF=0.1841;AVGPOST=0.9930;RSQ=0.9807;ERATE=0.0007;THETA=0.0004;AC=403;AN=2184 GT:DS:GL:BD 0.18452381 0
1 25201720 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.8498;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25201756 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8058;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25201821 MERGED_DEL_2_2416 CTGCAGTTCCTCCGGGCTAGCTGTCTCAGTGGTCACTTCGCCCCCAGACAGGTAGCTTCTGCCCACTTCTCTCATGGGGCAGCCAAGTGTTACTACCTCTGGCCCCGGCCTGGAATAAGAGGACCAGCAGGCCGTGGGAAACCTCAGCTCTAATACCAGGCTGCTTCTGGACAGTCCTTTCTGGGTGTGG C . . SV;BAVGPOST=0.998;BRSQ=0.965;LDAF=0.0340;AVGPOST=0.9868;RSQ=0.8471;ERATE=0.0026;THETA=0.0004;CIEND=-58,95;CIPOS=-82,75;END=25203635;HOMLEN=4;HOMSEQ=TGCA;SOURCE=AssembledBreakpoints_25201821_ GT:DS:GL:BD 0.02884615 0
1 25201927 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.844;LDAF=0.0047;AVGPOST=0.9961;RSQ=0.6556;ERATE=0.0007;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25201928 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0253;AVGPOST=0.9986;RSQ=0.9751;ERATE=0.0006;THETA=0.0005;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 25201944 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.6577;ERATE=0.0010;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25201945 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25201952 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.759;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.6177;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25201994 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.659;LDAF=0.0015;AVGPOST=0.9983;RSQ=0.5546;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25202106 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0023;AVGPOST=0.9987;RSQ=0.7409;ERATE=0.0011;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25202107 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5316;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25202161 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.834;LDAF=0.0058;AVGPOST=0.9933;RSQ=0.5750;ERATE=0.0006;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25202196 . CT C 931 PASS INDEL;BAVGPOST=0.984;BRSQ=0.780;LDAF=0.0461;AVGPOST=0.9670;RSQ=0.7019;ERATE=0.0056;THETA=0.0004;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 25202251 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.609;LDAF=0.0165;AVGPOST=0.9883;RSQ=0.7036;ERATE=0.0005;THETA=0.0006;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 25202257 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.382;LDAF=0.0078;AVGPOST=0.9882;RSQ=0.3685;ERATE=0.0020;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25202311 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.2046;AVGPOST=0.9940;RSQ=0.9847;ERATE=0.0004;THETA=0.0005;AC=448;AN=2184 GT:DS:GL:BD 0.20512821 0
1 25202384 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.675;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25202467 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.946;LDAF=0.0203;AVGPOST=0.9989;RSQ=0.9800;ERATE=0.0003;THETA=0.0005;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 25202488 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.640;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5415;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25202531 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5072;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25202614 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.813;LDAF=0.0080;AVGPOST=0.9936;RSQ=0.6700;ERATE=0.0014;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 25202670 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0262;AVGPOST=0.9982;RSQ=0.9778;ERATE=0.0003;THETA=0.0006;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 25202832 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.882;BRSQ=0.568;LDAF=0.2083;AVGPOST=0.8352;RSQ=0.6071;ERATE=0.0183;THETA=0.0008;AC=370;AN=2184 GT:DS:GL:BD 0.16941392 0
1 25202837 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.878;BRSQ=0.523;LDAF=0.2249;AVGPOST=0.7846;RSQ=0.4916;ERATE=0.0239;THETA=0.0028;AC=370;AN=2184 GT:DS:GL:BD 0.16941392 0
1 25202847 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.841;BRSQ=0.217;LDAF=0.2284;AVGPOST=0.7004;RSQ=0.2966;ERATE=0.0391;THETA=0.0004;AC=232;AN=2184 GT:DS:GL:BD 0.10622711 0
1 25202854 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.230;LDAF=0.0655;AVGPOST=0.9070;RSQ=0.4146;ERATE=0.0049;THETA=0.0048;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 25202873 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.878;BRSQ=0.690;LDAF=0.2471;AVGPOST=0.8740;RSQ=0.7291;ERATE=0.0096;THETA=0.0005;AC=523;AN=2184 GT:DS:GL:BD 0.23946886 0
1 25203009 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.989;LDAF=0.6841;AVGPOST=0.9899;RSQ=0.9833;ERATE=0.0005;THETA=0.0005;AC=1498;AN=2184 GT:DS:GL:BD 0.68589741 1
1 25203117 . GT G 211 PASS INDEL;BAVGPOST=0.999;BRSQ=0.682;LDAF=0.0027;AVGPOST=0.9963;RSQ=0.4654;ERATE=0.0004;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25203133 . G GT 78 PASS INDEL;BAVGPOST=0.999;BRSQ=0.805;LDAF=0.0024;AVGPOST=0.9978;RSQ=0.5925;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25203221 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.4757;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25203222 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0019;AVGPOST=0.9992;RSQ=0.8282;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25203318 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0207;AVGPOST=0.9987;RSQ=0.9752;ERATE=0.0004;THETA=0.0004;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 25203390 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.985;LDAF=0.3817;AVGPOST=0.9909;RSQ=0.9843;ERATE=0.0006;THETA=0.0032;AC=830;AN=2184 GT:DS:GL:BD 0.38003662 0
1 25203444 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4900;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25203585 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.690;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4467;ERATE=0.0006;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25203845 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5263;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25203881 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7353;ERATE=0.0006;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25203945 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.738;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5367;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25203984 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.889;LDAF=0.0027;AVGPOST=0.9988;RSQ=0.8224;ERATE=0.0004;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25204159 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.2305;AVGPOST=0.9960;RSQ=0.9907;ERATE=0.0005;THETA=0.0141;AC=502;AN=2184 GT:DS:GL:BD 0.22985348 0
1 25204229 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0057;AVGPOST=0.9986;RSQ=0.9168;ERATE=0.0004;THETA=0.0040;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25204438 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9914;ERATE=0.0003;THETA=0.0036;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25204454 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0023;AVGPOST=0.9993;RSQ=0.8777;ERATE=0.0003;THETA=0.0054;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25204558 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0029;AVGPOST=0.9991;RSQ=0.8725;ERATE=0.0004;THETA=0.0021;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25204634 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.927;LDAF=0.0093;AVGPOST=0.9982;RSQ=0.9157;ERATE=0.0003;THETA=0.0047;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 25204712 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0036;AVGPOST=0.9991;RSQ=0.8951;ERATE=0.0003;THETA=0.0051;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25204729 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0049;AVGPOST=0.9985;RSQ=0.8746;ERATE=0.0006;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25204753 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.983;LDAF=0.2035;AVGPOST=0.9931;RSQ=0.9832;ERATE=0.0013;THETA=0.0039;AC=442;AN=2184 GT:DS:GL:BD 0.20238096 0
1 25204837 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6674;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25204947 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6818;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25205009 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0063;AVGPOST=0.9994;RSQ=0.9523;ERATE=0.0004;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 25205058 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0041;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25205109 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.862;LDAF=0.0042;AVGPOST=0.9988;RSQ=0.8786;ERATE=0.0005;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25205134 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7608;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25205140 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7149;ERATE=0.0003;THETA=0.0050;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25205145 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0051;AVGPOST=0.9997;RSQ=0.9743;ERATE=0.0003;THETA=0.0013;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25205252 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2157;AVGPOST=0.9982;RSQ=0.9954;ERATE=0.0004;THETA=0.0005;AC=471;AN=2184 GT:DS:GL:BD 0.21565934 0
1 25205266 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.794;LDAF=0.0044;AVGPOST=0.9981;RSQ=0.8468;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25205407 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7723;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25205448 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6714;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25205594 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8783;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25205650 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0129;AVGPOST=0.9996;RSQ=0.9864;ERATE=0.0003;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 25205676 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25205731 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8815;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25205916 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6288;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25205945 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9609;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25206098 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0482;AVGPOST=0.9993;RSQ=0.9933;ERATE=0.0003;THETA=0.0005;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 25206147 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25206270 . G GT 845 PASS INDEL;BAVGPOST=0.998;BRSQ=0.856;LDAF=0.0056;AVGPOST=0.9978;RSQ=0.8643;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25206272 . A AC 831 PASS INDEL;BAVGPOST=0.998;BRSQ=0.855;LDAF=0.0056;AVGPOST=0.9979;RSQ=0.8677;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25206318 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9361;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25206404 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2203;AVGPOST=0.9975;RSQ=0.9943;ERATE=0.0004;THETA=0.0006;AC=480;AN=2184 GT:DS:GL:BD 0.21978022 0
1 25206537 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8390;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25206568 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0025;AVGPOST=0.9989;RSQ=0.8727;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25206905 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6744;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25207046 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.603;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.3627;ERATE=0.0007;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25207046 . GTATATATAGAATA G 15272 PASS INDEL;BAVGPOST=0.941;BRSQ=0.801;LDAF=0.1750;AVGPOST=0.9560;RSQ=0.8917;ERATE=0.0008;THETA=0.0003;AC=385;AN=2184 GT:DS:GL:BD 0.17628205 0
1 25207056 rs59688661 AATAT A 7448 PASS INDEL;BAVGPOST=0.941;BRSQ=0.801;LDAF=0.1757;AVGPOST=0.9523;RSQ=0.8787;ERATE=0.0006;THETA=0.0036;AC=381;AN=2184 GT:DS:GL:BD 0.17445055 0
1 25207069 . AATATATAG A 11489 PASS INDEL;BAVGPOST=0.941;BRSQ=0.777;LDAF=0.1564;AVGPOST=0.9506;RSQ=0.8571;ERATE=0.0014;THETA=0.0003;AC=342;AN=2184 GT:DS:GL:BD 0.15659341 0
1 25207136 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.952;LDAF=0.1044;AVGPOST=0.9913;RSQ=0.9653;ERATE=0.0005;THETA=0.0009;AC=224;AN=2184 GT:DS:GL:BD 0.10256410 0
1 25207374 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.909;LDAF=0.0044;AVGPOST=0.9989;RSQ=0.9043;ERATE=0.0005;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25207400 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9599;ERATE=0.0005;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25207457 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25207517 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7950;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25207559 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5742;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25207629 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.3283;AVGPOST=0.9963;RSQ=0.9938;ERATE=0.0006;THETA=0.0006;AC=717;AN=2184 GT:DS:GL:BD 0.32829669 0
1 25207784 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7189;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25207841 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0039;AVGPOST=0.9994;RSQ=0.9238;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25207993 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25208134 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0158;AVGPOST=0.9986;RSQ=0.9640;ERATE=0.0003;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 25208160 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.2149;AVGPOST=0.9980;RSQ=0.9950;ERATE=0.0005;THETA=0.0004;AC=470;AN=2184 GT:DS:GL:BD 0.21520147 0
1 25208279 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0044;AVGPOST=0.9977;RSQ=0.7867;ERATE=0.0006;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25208336 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.816;LDAF=0.0028;AVGPOST=0.9987;RSQ=0.7910;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25208619 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25208661 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9863;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25208769 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9538;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25209163 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9026;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25209177 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6555;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25209254 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0034;AVGPOST=0.9997;RSQ=0.9545;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25209403 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.835;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8669;ERATE=0.0003;THETA=0.0034;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25209415 rs76120874 T TA 20255 PASS INDEL;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2354;AVGPOST=0.9972;RSQ=0.9930;ERATE=0.0011;THETA=0.0003;AC=514;AN=2184 GT:DS:GL:BD 0.23534799 0
1 25209493 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.837;LDAF=0.0058;AVGPOST=0.9970;RSQ=0.8026;ERATE=0.0007;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25209606 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0019;AVGPOST=0.9975;RSQ=0.4395;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25209624 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0027;AVGPOST=0.9982;RSQ=0.7698;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25209739 . TG T 2305 PASS INDEL;BAVGPOST=0.997;BRSQ=0.978;LDAF=0.0262;AVGPOST=0.9978;RSQ=0.9684;ERATE=0.0004;THETA=0.0002;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 25209896 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0123;AVGPOST=0.9994;RSQ=0.9818;ERATE=0.0003;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 25209957 . A AT 248 PASS INDEL;BAVGPOST=0.998;BRSQ=0.742;LDAF=0.0027;AVGPOST=0.9975;RSQ=0.6589;ERATE=0.0008;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25210079 . A AG 18 PASS INDEL;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6846;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25210118 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.596;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4249;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25210366 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4939;AVGPOST=0.9952;RSQ=0.9929;ERATE=0.0006;THETA=0.0003;AC=1078;AN=2184 GT:DS:GL:BD 0.49358973 0
1 25210483 . TG T 52 PASS INDEL;BAVGPOST=1.000;BRSQ=0.662;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4385;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25210778 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0024;AVGPOST=0.9991;RSQ=0.8280;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25210815 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3282;AVGPOST=0.9980;RSQ=0.9964;ERATE=0.0004;THETA=0.0002;AC=717;AN=2184 GT:DS:GL:BD 0.32829669 0
1 25210994 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2149;AVGPOST=0.9988;RSQ=0.9970;ERATE=0.0003;THETA=0.0002;AC=470;AN=2184 GT:DS:GL:BD 0.21520147 0
1 25211024 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0040;AVGPOST=0.9991;RSQ=0.9067;ERATE=0.0003;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25211054 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8441;ERATE=0.0007;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25211141 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7089;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25211196 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.0607;AVGPOST=0.9983;RSQ=0.9903;ERATE=0.0003;THETA=0.0002;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 25211198 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0562;AVGPOST=0.9998;RSQ=0.9981;ERATE=0.0003;THETA=0.0004;AC=123;AN=2184 GT:DS:GL:BD 0.05631868 0
1 25211547 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6229;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25211763 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.6102;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25211826 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0080;AVGPOST=0.9968;RSQ=0.8324;ERATE=0.0007;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 25211839 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.497;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4447;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25211893 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0123;AVGPOST=0.9989;RSQ=0.9623;ERATE=0.0004;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 25212019 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.6675;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25212055 . CA C 292 PASS INDEL;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25212100 . TG T 7772 PASS INDEL;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0575;AVGPOST=0.9988;RSQ=0.9910;ERATE=0.0005;THETA=0.0003;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 25212262 . GC G 237 PASS INDEL;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5540;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25212339 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0025;AVGPOST=0.9985;RSQ=0.7569;ERATE=0.0005;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25212349 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.909;LDAF=0.0149;AVGPOST=0.9987;RSQ=0.9666;ERATE=0.0003;THETA=0.0002;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 25212378 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.8487;AVGPOST=0.9931;RSQ=0.9815;ERATE=0.0005;THETA=0.0005;AC=1856;AN=2184 GT:DS:GL:BD 0.84981686 1
1 25212397 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.927;LDAF=0.0182;AVGPOST=0.9946;RSQ=0.9005;ERATE=0.0004;THETA=0.0002;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 25212405 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.561;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6191;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25212424 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9670;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25212445 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0165;AVGPOST=0.9976;RSQ=0.9379;ERATE=0.0006;THETA=0.0006;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 25212673 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5542;AVGPOST=0.9987;RSQ=0.9980;ERATE=0.0004;THETA=0.0004;AC=1211;AN=2184 GT:DS:GL:BD 0.55448717 1
1 25212679 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7721;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25212709 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.923;LDAF=0.0087;AVGPOST=0.9987;RSQ=0.9408;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 25212842 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.926;LDAF=0.0079;AVGPOST=0.9997;RSQ=0.9804;ERATE=0.0003;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 25213046 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2154;AVGPOST=0.9987;RSQ=0.9964;ERATE=0.0005;THETA=0.0007;AC=470;AN=2184 GT:DS:GL:BD 0.21520147 0
1 25213237 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.9894;AVGPOST=0.9987;RSQ=0.9527;ERATE=0.0003;THETA=0.0002;AC=2162;AN=2184 GT:DS:GL:BD 0.98992676 1
1 25213302 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.902;LDAF=0.0076;AVGPOST=0.9955;RSQ=0.7756;ERATE=0.0022;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 25213357 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8180;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25213379 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1498;AVGPOST=0.9984;RSQ=0.9946;ERATE=0.0004;THETA=0.0003;AC=326;AN=2184 GT:DS:GL:BD 0.14926741 0
1 25213406 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25213424 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.708;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6328;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25213523 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9167;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25213542 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0565;AVGPOST=0.9989;RSQ=0.9919;ERATE=0.0004;THETA=0.0003;AC=123;AN=2184 GT:DS:GL:BD 0.05631868 0
1 25213690 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25213800 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5966;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25213803 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2152;AVGPOST=0.9994;RSQ=0.9983;ERATE=0.0003;THETA=0.0002;AC=470;AN=2184 GT:DS:GL:BD 0.21520147 0
1 25213813 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2152;AVGPOST=0.9989;RSQ=0.9971;ERATE=0.0005;THETA=0.0013;AC=470;AN=2184 GT:DS:GL:BD 0.21520147 0
1 25213867 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9863;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25214010 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0025;AVGPOST=0.9984;RSQ=0.7835;ERATE=0.0006;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25214029 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0087;AVGPOST=0.9980;RSQ=0.9248;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 25214033 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.979;LDAF=0.2182;AVGPOST=0.9894;RSQ=0.9761;ERATE=0.0035;THETA=0.0004;AC=479;AN=2184 GT:DS:GL:BD 0.21932234 0
1 25214060 . TAC T 35 PASS INDEL;BAVGPOST=0.988;BRSQ=0.476;LDAF=0.0726;AVGPOST=0.9151;RSQ=0.5164;ERATE=0.0103;THETA=0.0005;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 25214096 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.730;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4603;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25214284 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2229;AVGPOST=0.9975;RSQ=0.9938;ERATE=0.0006;THETA=0.0012;AC=487;AN=2184 GT:DS:GL:BD 0.22298534 0
1 25214309 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7759;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25214316 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0035;AVGPOST=0.9992;RSQ=0.9036;ERATE=0.0004;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25214354 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0024;AVGPOST=0.9976;RSQ=0.5718;ERATE=0.0007;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25214371 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.4810;AVGPOST=0.9912;RSQ=0.9866;ERATE=0.0015;THETA=0.0050;AC=1050;AN=2184 GT:DS:GL:BD 0.48076922 0
1 25214391 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.987;LDAF=0.2452;AVGPOST=0.9929;RSQ=0.9848;ERATE=0.0008;THETA=0.0006;AC=534;AN=2184 GT:DS:GL:BD 0.24450549 0
1 25214515 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25214526 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7348;ERATE=0.0003;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25214617 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5392;ERATE=0.0004;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25214849 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.7234;ERATE=0.0004;THETA=0.0043;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25214857 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7204;ERATE=0.0010;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25214908 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.2432;AVGPOST=0.9936;RSQ=0.9852;ERATE=0.0011;THETA=0.0031;AC=533;AN=2184 GT:DS:GL:BD 0.24404761 0
1 25214954 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=1.0000;AVGPOST=0.9999;RSQ=0.0499;ERATE=0.0003;THETA=0.0008;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 25214965 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.965;BRSQ=0.755;LDAF=0.9239;AVGPOST=0.9457;RSQ=0.7075;ERATE=0.0168;THETA=0.0032;AC=2053;AN=2184 GT:DS:GL:BD 0.94001830 1
1 25215013 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25215162 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0022;AVGPOST=0.9973;RSQ=0.4393;ERATE=0.0008;THETA=0.0122;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25215247 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.985;LDAF=0.2249;AVGPOST=0.9805;RSQ=0.9590;ERATE=0.0037;THETA=0.0015;AC=491;AN=2184 GT:DS:GL:BD 0.22481684 0
1 25215251 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.918;LDAF=0.0277;AVGPOST=0.9914;RSQ=0.8769;ERATE=0.0005;THETA=0.0037;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 25215321 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.959;LDAF=0.0667;AVGPOST=0.9961;RSQ=0.9789;ERATE=0.0004;THETA=0.0011;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 25215342 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0043;AVGPOST=0.9981;RSQ=0.8231;ERATE=0.0005;THETA=0.0084;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25215352 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.973;LDAF=0.0439;AVGPOST=0.9947;RSQ=0.9557;ERATE=0.0006;THETA=0.0092;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 25215361 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25215431 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0027;AVGPOST=0.9989;RSQ=0.8045;ERATE=0.0005;THETA=0.0159;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25215632 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.974;LDAF=0.1892;AVGPOST=0.9885;RSQ=0.9718;ERATE=0.0005;THETA=0.0005;AC=408;AN=2184 GT:DS:GL:BD 0.18681319 0
1 25215643 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0052;AVGPOST=0.9996;RSQ=0.9660;ERATE=0.0003;THETA=0.0073;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25215650 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9755;ERATE=0.0003;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25215659 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5229;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25215668 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9882;ERATE=0.0004;THETA=0.0045;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25215720 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0102;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25215750 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.5522;AVGPOST=0.9947;RSQ=0.9921;ERATE=0.0004;THETA=0.0008;AC=1207;AN=2184 GT:DS:GL:BD 0.55265570 1
1 25215758 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9525;ERATE=0.0003;THETA=0.0034;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25215884 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0141;AVGPOST=0.9993;RSQ=0.9799;ERATE=0.0005;THETA=0.0106;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 25215923 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0208;AVGPOST=0.9992;RSQ=0.9855;ERATE=0.0003;THETA=0.0019;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 25215985 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0044;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25215989 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.1683;AVGPOST=0.9979;RSQ=0.9948;ERATE=0.0004;THETA=0.0003;AC=367;AN=2184 GT:DS:GL:BD 0.16804029 0
1 25216007 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0101;AVGPOST=0.9990;RSQ=0.9645;ERATE=0.0003;THETA=0.0020;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 25216031 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2199;AVGPOST=0.9983;RSQ=0.9962;ERATE=0.0004;THETA=0.0003;AC=480;AN=2184 GT:DS:GL:BD 0.21978022 0
1 25216046 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.2370;AVGPOST=0.9966;RSQ=0.9930;ERATE=0.0007;THETA=0.0005;AC=517;AN=2184 GT:DS:GL:BD 0.23672161 0
1 25216062 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0018;AVGPOST=0.9997;RSQ=0.9305;ERATE=0.0004;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25216106 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0096;AVGPOST=0.9992;RSQ=0.9657;ERATE=0.0003;THETA=0.0020;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 25216150 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8622;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25216152 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.1574;AVGPOST=0.9992;RSQ=0.9978;ERATE=0.0004;THETA=0.0002;AC=343;AN=2184 GT:DS:GL:BD 0.15705128 0
1 25216165 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2179;AVGPOST=0.9989;RSQ=0.9974;ERATE=0.0004;THETA=0.0002;AC=476;AN=2184 GT:DS:GL:BD 0.21794872 0
1 25216237 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25216360 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.846;LDAF=0.0060;AVGPOST=0.9970;RSQ=0.8020;ERATE=0.0006;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25216366 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5736;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25216378 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3673;AVGPOST=0.9977;RSQ=0.9957;ERATE=0.0005;THETA=0.0005;AC=802;AN=2184 GT:DS:GL:BD 0.36721611 0
1 25216472 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9201;ERATE=0.0003;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25216493 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6767;ERATE=0.0007;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25216494 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2167;AVGPOST=0.9998;RSQ=0.9995;ERATE=0.0003;THETA=0.0004;AC=473;AN=2184 GT:DS:GL:BD 0.21657509 0
1 25216499 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.765;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6102;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25216532 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7504;AVGPOST=0.9990;RSQ=0.9978;ERATE=0.0005;THETA=0.0004;AC=1639;AN=2184 GT:DS:GL:BD 0.75045788 1
1 25216534 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9420;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25216566 . TG T 74 PASS INDEL;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5817;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25216592 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25216593 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.757;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7571;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25216610 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0096;AVGPOST=1.0000;RSQ=0.9981;ERATE=0.0003;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 25216707 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8138;ERATE=0.0006;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25216726 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2149;AVGPOST=0.9982;RSQ=0.9957;ERATE=0.0005;THETA=0.0003;AC=468;AN=2184 GT:DS:GL:BD 0.21428572 0
1 25216730 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0210;AVGPOST=0.9999;RSQ=0.9969;ERATE=0.0003;THETA=0.0003;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 25216876 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0047;AVGPOST=0.9968;RSQ=0.7481;ERATE=0.0005;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25217004 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2355;AVGPOST=0.9993;RSQ=0.9982;ERATE=0.0004;THETA=0.0009;AC=514;AN=2184 GT:DS:GL:BD 0.23534799 0
1 25217235 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5445;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25217346 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.7932;AVGPOST=0.9964;RSQ=0.9920;ERATE=0.0018;THETA=0.0003;AC=1732;AN=2184 GT:DS:GL:BD 0.79304028 1
1 25217483 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.671;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5729;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25217599 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9614;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25217743 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9660;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25217788 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.9206;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25217860 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0183;AVGPOST=0.9988;RSQ=0.9742;ERATE=0.0004;THETA=0.0004;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 25217918 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.802;LDAF=0.0035;AVGPOST=0.9975;RSQ=0.6750;ERATE=0.0024;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25217994 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2268;AVGPOST=0.9991;RSQ=0.9978;ERATE=0.0004;THETA=0.0002;AC=495;AN=2184 GT:DS:GL:BD 0.22664835 0
1 25218048 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25218126 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2171;AVGPOST=0.9993;RSQ=0.9982;ERATE=0.0004;THETA=0.0004;AC=474;AN=2184 GT:DS:GL:BD 0.21703297 0
1 25218488 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.977;LDAF=0.0111;AVGPOST=0.9994;RSQ=0.9759;ERATE=0.0004;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 25218548 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.664;LDAF=0.0016;AVGPOST=0.9975;RSQ=0.3938;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25218579 . A AC 2318 PASS INDEL;BAVGPOST=0.997;BRSQ=0.940;LDAF=0.0209;AVGPOST=0.9946;RSQ=0.8908;ERATE=0.0005;THETA=0.0002;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 25218685 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1638;AVGPOST=0.9965;RSQ=0.9905;ERATE=0.0004;THETA=0.0003;AC=357;AN=2184 GT:DS:GL:BD 0.16346154 0
1 25218708 . C CTTG 2318 PASS INDEL;BAVGPOST=0.995;BRSQ=0.856;LDAF=0.0160;AVGPOST=0.9951;RSQ=0.8801;ERATE=0.0011;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 25218792 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0018;AVGPOST=0.9996;RSQ=0.9134;ERATE=0.0005;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25218912 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0040;AVGPOST=0.9974;RSQ=0.7405;ERATE=0.0005;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25218961 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4939;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25219130 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2266;AVGPOST=0.9994;RSQ=0.9987;ERATE=0.0003;THETA=0.0004;AC=495;AN=2184 GT:DS:GL:BD 0.22664835 0
1 25219141 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3384;AVGPOST=0.9967;RSQ=0.9945;ERATE=0.0005;THETA=0.0003;AC=739;AN=2184 GT:DS:GL:BD 0.33836997 0
1 25219177 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5448;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25219192 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0213;AVGPOST=0.9993;RSQ=0.9852;ERATE=0.0003;THETA=0.0004;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 25219201 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6230;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25219373 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0018;AVGPOST=0.9998;RSQ=0.9459;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25219575 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0979;AVGPOST=0.9983;RSQ=0.9925;ERATE=0.0004;THETA=0.0003;AC=212;AN=2184 GT:DS:GL:BD 0.09706960 0
1 25219690 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9058;ERATE=0.0011;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25219808 . AG A 1700 PASS INDEL;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0146;AVGPOST=0.9973;RSQ=0.9255;ERATE=0.0005;THETA=0.0002;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 25219850 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9459;ERATE=0.0006;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25219866 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.7085;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25219923 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9506;ERATE=0.0006;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25219936 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0211;AVGPOST=0.9999;RSQ=0.9979;ERATE=0.0003;THETA=0.0003;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 25220036 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0036;AVGPOST=0.9984;RSQ=0.8117;ERATE=0.0005;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25220418 rs112637350 C CTACA 37709 PASS INDEL;BAVGPOST=0.956;BRSQ=0.925;LDAF=0.3695;AVGPOST=0.9608;RSQ=0.9454;ERATE=0.0006;THETA=0.0003;AC=803;AN=2184 GT:DS:GL:BD 0.36767399 0
1 25220419 rs67262397 T TACAA 18624 PASS INDEL;BAVGPOST=0.956;BRSQ=0.925;LDAF=0.3683;AVGPOST=0.9619;RSQ=0.9467;ERATE=0.0006;THETA=0.0003;AC=800;AN=2184 GT:DS:GL:BD 0.36630037 0
1 25220420 . A ACATC 18560 PASS INDEL;BAVGPOST=0.956;BRSQ=0.925;LDAF=0.3663;AVGPOST=0.9629;RSQ=0.9477;ERATE=0.0005;THETA=0.0004;AC=797;AN=2184 GT:DS:GL:BD 0.36492673 0
1 25220422 rs67253538 A ATAC 18129 PASS INDEL;BAVGPOST=0.953;BRSQ=0.916;LDAF=0.3547;AVGPOST=0.9382;RSQ=0.9037;ERATE=0.0056;THETA=0.0004;AC=767;AN=2184 GT:DS:GL:BD 0.35119048 0
1 25220433 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6474;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25220498 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3667;AVGPOST=0.9963;RSQ=0.9943;ERATE=0.0005;THETA=0.0001;AC=803;AN=2184 GT:DS:GL:BD 0.36767399 0
1 25220513 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6112;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25220541 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.2083;AVGPOST=0.9967;RSQ=0.9929;ERATE=0.0007;THETA=0.0003;AC=455;AN=2184 GT:DS:GL:BD 0.20833333 0
1 25220552 . GT G 45 PASS INDEL;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25220590 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2285;AVGPOST=0.9968;RSQ=0.9930;ERATE=0.0006;THETA=0.0002;AC=497;AN=2184 GT:DS:GL:BD 0.22756410 0
1 25220671 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.7600;AVGPOST=0.9968;RSQ=0.9925;ERATE=0.0007;THETA=0.0006;AC=1662;AN=2184 GT:DS:GL:BD 0.76098901 1
1 25220710 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.541;LDAF=0.0065;AVGPOST=0.9919;RSQ=0.4696;ERATE=0.0013;THETA=0.0029;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25220719 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.604;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.3920;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25221020 . CTT C 953 PASS INDEL;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0094;AVGPOST=0.9976;RSQ=0.8996;ERATE=0.0005;THETA=0.0001;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 25221024 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3937;AVGPOST=0.9979;RSQ=0.9963;ERATE=0.0005;THETA=0.0002;AC=859;AN=2184 GT:DS:GL:BD 0.39331502 0
1 25221035 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.978;LDAF=0.0119;AVGPOST=0.9987;RSQ=0.9527;ERATE=0.0003;THETA=0.0007;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 25221084 . A AGTTTT 21881 PASS INDEL;BAVGPOST=0.972;BRSQ=0.911;LDAF=0.1681;AVGPOST=0.9888;RSQ=0.9674;ERATE=0.0007;THETA=0.0006;AC=374;AN=2184 GT:DS:GL:BD 0.17124543 0
1 25221232 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.666;LDAF=0.0036;AVGPOST=0.9947;RSQ=0.4088;ERATE=0.0005;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25221272 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.917;LDAF=0.0125;AVGPOST=0.9981;RSQ=0.9325;ERATE=0.0004;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 25221489 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.3944;AVGPOST=0.9940;RSQ=0.9898;ERATE=0.0011;THETA=0.0004;AC=858;AN=2184 GT:DS:GL:BD 0.39285713 0
1 25221624 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0263;AVGPOST=0.9981;RSQ=0.9702;ERATE=0.0004;THETA=0.0005;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 25221678 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.906;LDAF=0.0140;AVGPOST=0.9960;RSQ=0.8946;ERATE=0.0003;THETA=0.0039;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 25221820 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.684;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7100;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25221821 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.819;LDAF=0.0045;AVGPOST=0.9974;RSQ=0.7814;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25221953 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5065;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25222108 . CTTGAGGCCAAGAGT C 2258 PASS INDEL;BAVGPOST=0.994;BRSQ=0.732;LDAF=0.0155;AVGPOST=0.9930;RSQ=0.8330;ERATE=0.0003;THETA=0.0024;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 25222359 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6265;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25222379 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.3989;AVGPOST=0.9935;RSQ=0.9907;ERATE=0.0006;THETA=0.0008;AC=873;AN=2184 GT:DS:GL:BD 0.39972529 0
1 25222422 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0047;AVGPOST=0.9994;RSQ=0.9404;ERATE=0.0008;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25222434 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9298;ERATE=0.0004;THETA=0.0013;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25222489 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6941;ERATE=0.0003;THETA=0.0047;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25222493 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0064;AVGPOST=0.9991;RSQ=0.9403;ERATE=0.0003;THETA=0.0013;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 25222541 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0406;AVGPOST=0.9993;RSQ=0.9937;ERATE=0.0003;THETA=0.0006;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 25222577 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0063;AVGPOST=0.9981;RSQ=0.8894;ERATE=0.0005;THETA=0.0010;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 25222667 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9545;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25222778 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25222786 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0041;AVGPOST=0.9992;RSQ=0.9099;ERATE=0.0004;THETA=0.0019;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25222945 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.983;LDAF=0.1057;AVGPOST=0.9941;RSQ=0.9780;ERATE=0.0004;THETA=0.0017;AC=232;AN=2184 GT:DS:GL:BD 0.10622711 0
1 25223035 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0097;AVGPOST=0.9999;RSQ=0.9948;ERATE=0.0003;THETA=0.0075;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 25223045 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0407;AVGPOST=0.9984;RSQ=0.9864;ERATE=0.0004;THETA=0.0047;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 25223206 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6313;ERATE=0.0004;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25223334 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.951;LDAF=0.0080;AVGPOST=0.9975;RSQ=0.8781;ERATE=0.0005;THETA=0.0102;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 25223496 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.862;LDAF=0.0129;AVGPOST=0.9941;RSQ=0.8416;ERATE=0.0005;THETA=0.0007;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 25223498 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.707;LDAF=0.0042;AVGPOST=0.9952;RSQ=0.5773;ERATE=0.0004;THETA=0.0055;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25223506 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.771;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4979;ERATE=0.0004;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25223659 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6151;ERATE=0.0003;THETA=0.0044;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25223749 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.896;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8456;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25223836 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.967;BRSQ=0.944;LDAF=0.6123;AVGPOST=0.9403;RSQ=0.9067;ERATE=0.0086;THETA=0.0113;AC=1341;AN=2184 GT:DS:GL:BD 0.61401099 1
1 25223905 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.958;LDAF=0.5827;AVGPOST=0.9539;RSQ=0.9307;ERATE=0.0043;THETA=0.0094;AC=1278;AN=2184 GT:DS:GL:BD 0.58516484 1
1 25223928 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.819;LDAF=0.0017;AVGPOST=0.9982;RSQ=0.5064;ERATE=0.0005;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25224010 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.970;LDAF=0.4250;AVGPOST=0.9697;RSQ=0.9597;ERATE=0.0023;THETA=0.0105;AC=928;AN=2184 GT:DS:GL:BD 0.42490843 0
1 25224194 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.599;LDAF=0.0020;AVGPOST=0.9982;RSQ=0.5995;ERATE=0.0005;THETA=0.0222;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25224250 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0015;AVGPOST=0.9985;RSQ=0.5549;ERATE=0.0005;THETA=0.0084;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25224321 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.949;LDAF=0.2814;AVGPOST=0.9596;RSQ=0.9268;ERATE=0.0104;THETA=0.0250;AC=595;AN=2184 GT:DS:GL:BD 0.27243590 0
1 25224411 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.955;BRSQ=0.919;LDAF=0.3447;AVGPOST=0.9573;RSQ=0.9335;ERATE=0.0005;THETA=0.0003;AC=754;AN=2184 GT:DS:GL:BD 0.34523809 0
1 25224412 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.955;BRSQ=0.917;LDAF=0.3422;AVGPOST=0.9586;RSQ=0.9354;ERATE=0.0003;THETA=0.0073;AC=747;AN=2184 GT:DS:GL:BD 0.34203297 0
1 25224505 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.912;LDAF=0.0157;AVGPOST=0.9970;RSQ=0.9275;ERATE=0.0004;THETA=0.0104;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 25224509 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.954;LDAF=0.1312;AVGPOST=0.9859;RSQ=0.9609;ERATE=0.0011;THETA=0.0114;AC=279;AN=2184 GT:DS:GL:BD 0.12774725 0
1 25224576 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.954;LDAF=0.0186;AVGPOST=0.9979;RSQ=0.9529;ERATE=0.0003;THETA=0.0104;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 25224715 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.8101;ERATE=0.0005;THETA=0.0103;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25224767 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.5381;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25224957 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.977;LDAF=0.4965;AVGPOST=0.9790;RSQ=0.9741;ERATE=0.0008;THETA=0.0060;AC=1083;AN=2184 GT:DS:GL:BD 0.49587911 0
1 25225113 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25225151 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.780;LDAF=0.0100;AVGPOST=0.9947;RSQ=0.7974;ERATE=0.0006;THETA=0.0032;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 25225268 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8960;ERATE=0.0003;THETA=0.0081;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25225318 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.6249;ERATE=0.0003;THETA=0.0088;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25225371 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6464;ERATE=0.0004;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25225391 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0002;AVGPOST=0.9996;RSQ=0.0607;ERATE=0.0003;THETA=0.0015;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 25225510 . CCTT C 268 PASS INDEL;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7031;ERATE=0.0011;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25225675 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.1813;AVGPOST=0.9951;RSQ=0.9900;ERATE=0.0005;THETA=0.0008;AC=394;AN=2184 GT:DS:GL:BD 0.18040293 0
1 25225680 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0053;AVGPOST=0.9988;RSQ=0.9099;ERATE=0.0005;THETA=0.0017;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 25225777 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0043;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25225856 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.3934;ERATE=0.0005;THETA=0.0037;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25225929 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.956;LDAF=0.0082;AVGPOST=0.9982;RSQ=0.9178;ERATE=0.0004;THETA=0.0015;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 25225932 . CAGG C 75 PASS INDEL;BAVGPOST=1.000;BRSQ=0.681;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4289;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25225953 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0043;AVGPOST=0.9987;RSQ=0.8805;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25225990 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0039;AVGPOST=0.9952;RSQ=0.5376;ERATE=0.0003;THETA=0.0027;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25226078 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25226106 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25226208 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0196;AVGPOST=0.9984;RSQ=0.9675;ERATE=0.0003;THETA=0.0023;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 25226229 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7408;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25226289 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7701;ERATE=0.0003;THETA=0.0025;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25226318 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5467;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25226408 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5523;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25226568 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25226658 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8916;ERATE=0.0003;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25226752 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0165;AVGPOST=0.9995;RSQ=0.9882;ERATE=0.0003;THETA=0.0012;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 25226768 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7865;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25226824 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6549;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25226914 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6589;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25226951 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.571;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7655;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25226986 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0068;AVGPOST=0.9984;RSQ=0.8911;ERATE=0.0004;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 25227024 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0018;AVGPOST=0.9988;RSQ=0.6840;ERATE=0.0005;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25227099 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.596;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.5801;ERATE=0.0006;THETA=0.0022;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25227179 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.729;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6313;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25227230 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.916;LDAF=0.0135;AVGPOST=0.9952;RSQ=0.8623;ERATE=0.0004;THETA=0.0011;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 25227369 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.615;LDAF=0.0058;AVGPOST=0.9917;RSQ=0.3950;ERATE=0.0014;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25227382 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.703;LDAF=0.0047;AVGPOST=0.9931;RSQ=0.3584;ERATE=0.0016;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25227461 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8844;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25227501 . CTGTTT C 274 PASS INDEL;BAVGPOST=0.999;BRSQ=0.709;LDAF=0.0039;AVGPOST=0.9962;RSQ=0.5844;ERATE=0.0008;THETA=0.0038;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25227508 . G GT 297 PASS INDEL;BAVGPOST=0.945;BRSQ=0.464;LDAF=0.0995;AVGPOST=0.8732;RSQ=0.4001;ERATE=0.0279;THETA=0.0014;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 25227532 . T TTG 1054 PASS INDEL;BAVGPOST=0.890;BRSQ=0.370;LDAF=0.0962;AVGPOST=0.9058;RSQ=0.5701;ERATE=0.0052;THETA=0.0010;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 25227534 rs3766283 T TG 532 PASS INDEL;BAVGPOST=0.994;BRSQ=0.692;LDAF=0.0124;AVGPOST=0.9879;RSQ=0.6370;ERATE=0.0011;THETA=0.0013;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 25227538 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.898;LDAF=0.0713;AVGPOST=0.9761;RSQ=0.8696;ERATE=0.0015;THETA=0.0008;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 25227538 . T TG 499 PASS INDEL;BAVGPOST=0.969;BRSQ=0.767;LDAF=0.0662;AVGPOST=0.9781;RSQ=0.8682;ERATE=0.0008;THETA=0.0026;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 25227604 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.930;LDAF=0.0161;AVGPOST=0.9961;RSQ=0.9041;ERATE=0.0006;THETA=0.0044;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 25227616 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25227646 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.890;LDAF=0.0059;AVGPOST=0.9984;RSQ=0.9008;ERATE=0.0003;THETA=0.0051;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 25227677 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.975;LDAF=0.1444;AVGPOST=0.9948;RSQ=0.9864;ERATE=0.0005;THETA=0.0007;AC=313;AN=2184 GT:DS:GL:BD 0.14331502 0
1 25227817 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.534;LDAF=0.0017;AVGPOST=0.9981;RSQ=0.5092;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25227837 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.932;LDAF=0.0182;AVGPOST=0.9976;RSQ=0.9495;ERATE=0.0004;THETA=0.0009;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 25227847 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.6707;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25227852 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.763;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8142;ERATE=0.0004;THETA=0.0016;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25227945 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.829;LDAF=0.0048;AVGPOST=0.9983;RSQ=0.8442;ERATE=0.0010;THETA=0.0074;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25228040 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.673;LDAF=0.0025;AVGPOST=0.9968;RSQ=0.4104;ERATE=0.0012;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25228167 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.726;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6075;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25228192 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.975;LDAF=0.0398;AVGPOST=0.9958;RSQ=0.9680;ERATE=0.0003;THETA=0.0005;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 25228322 . TC T 149 PASS INDEL;BAVGPOST=0.998;BRSQ=0.886;LDAF=0.0087;AVGPOST=0.9954;RSQ=0.8042;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 25228324 . CG C 377 PASS INDEL;BAVGPOST=0.994;BRSQ=0.787;LDAF=0.0115;AVGPOST=0.9960;RSQ=0.8513;ERATE=0.0006;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 25228412 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0090;AVGPOST=0.9994;RSQ=0.9774;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 25228419 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0210;AVGPOST=0.9980;RSQ=0.9561;ERATE=0.0006;THETA=0.0006;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 25228513 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0092;AVGPOST=0.9954;RSQ=0.8197;ERATE=0.0006;THETA=0.0012;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 25228524 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.942;LDAF=0.0472;AVGPOST=0.9913;RSQ=0.9318;ERATE=0.0006;THETA=0.0006;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 25228529 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.752;LDAF=0.0044;AVGPOST=0.9975;RSQ=0.7504;ERATE=0.0006;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25228547 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6138;ERATE=0.0004;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25228595 . AG A 13 PASS INDEL;BAVGPOST=0.999;BRSQ=0.642;LDAF=0.0078;AVGPOST=0.9915;RSQ=0.5711;ERATE=0.0011;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25228900 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.650;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25228976 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0040;AVGPOST=0.9983;RSQ=0.8108;ERATE=0.0025;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25229007 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25229011 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25229116 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0500;ERATE=0.0003;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 25229295 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0082;AVGPOST=0.9988;RSQ=0.9302;ERATE=0.0004;THETA=0.0032;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 25229307 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.984;LDAF=0.0564;AVGPOST=0.9979;RSQ=0.9846;ERATE=0.0004;THETA=0.0014;AC=123;AN=2184 GT:DS:GL:BD 0.05631868 0
1 25229361 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4752;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25229390 rs71276167 G GC 2594 PASS INDEL;BAVGPOST=0.989;BRSQ=0.917;LDAF=0.0519;AVGPOST=0.9736;RSQ=0.7971;ERATE=0.0010;THETA=0.0004;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 25229528 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0019;AVGPOST=0.9974;RSQ=0.4310;ERATE=0.0007;THETA=0.0034;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25229554 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.973;LDAF=0.0250;AVGPOST=0.9980;RSQ=0.9696;ERATE=0.0005;THETA=0.0006;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 25229707 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0091;AVGPOST=0.9992;RSQ=0.9713;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 25229792 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0073;AVGPOST=0.9964;RSQ=0.8120;ERATE=0.0004;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 25229937 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0096;AVGPOST=0.9991;RSQ=0.9599;ERATE=0.0004;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 25230131 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1110;AVGPOST=0.9985;RSQ=0.9944;ERATE=0.0003;THETA=0.0003;AC=241;AN=2184 GT:DS:GL:BD 0.11034799 0
1 25230356 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.794;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5914;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25230421 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8207;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25230467 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0054;AVGPOST=0.9975;RSQ=0.8194;ERATE=0.0008;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25230505 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.564;LDAF=0.0051;AVGPOST=0.9933;RSQ=0.4642;ERATE=0.0011;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25230770 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.663;LDAF=0.0031;AVGPOST=0.9969;RSQ=0.6381;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25230781 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0028;AVGPOST=0.9987;RSQ=0.7960;ERATE=0.0012;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25230915 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5263;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25231065 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0074;AVGPOST=0.9989;RSQ=0.9300;ERATE=0.0005;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 25231355 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1104;AVGPOST=0.9978;RSQ=0.9911;ERATE=0.0005;THETA=0.0004;AC=241;AN=2184 GT:DS:GL:BD 0.11034799 0
1 25231529 . T TG 8 PASS INDEL;BAVGPOST=0.999;BRSQ=0.480;LDAF=0.0037;AVGPOST=0.9935;RSQ=0.2240;ERATE=0.0010;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25231560 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4506;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25231562 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.988;LDAF=0.3392;AVGPOST=0.9833;RSQ=0.9718;ERATE=0.0008;THETA=0.0010;AC=739;AN=2184 GT:DS:GL:BD 0.33836997 0
1 25231674 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.794;LDAF=0.0034;AVGPOST=0.9987;RSQ=0.8253;ERATE=0.0005;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25231760 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25231794 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5940;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25231807 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.964;LDAF=0.0266;AVGPOST=0.9953;RSQ=0.9317;ERATE=0.0004;THETA=0.0024;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 25231875 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.745;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6709;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25232096 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.837;LDAF=0.0028;AVGPOST=0.9982;RSQ=0.7102;ERATE=0.0007;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25232117 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6772;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25232144 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25232234 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6108;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25232353 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4922;ERATE=0.0005;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25232379 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0244;AVGPOST=0.9989;RSQ=0.9834;ERATE=0.0004;THETA=0.0004;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 25232395 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.660;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6230;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25232483 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.863;LDAF=0.0041;AVGPOST=0.9971;RSQ=0.7014;ERATE=0.0006;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25232530 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.683;LDAF=0.0022;AVGPOST=0.9968;RSQ=0.4435;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25232564 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0071;AVGPOST=0.9995;RSQ=0.9627;ERATE=0.0004;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 25232610 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0038;AVGPOST=0.9963;RSQ=0.6323;ERATE=0.0006;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25232626 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.7996;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25232762 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6695;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25232834 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0092;AVGPOST=0.9985;RSQ=0.9370;ERATE=0.0004;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 25232918 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.890;LDAF=0.0080;AVGPOST=0.9975;RSQ=0.8761;ERATE=0.0008;THETA=0.0026;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 25232941 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.775;LDAF=0.0017;AVGPOST=0.9988;RSQ=0.7037;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25232959 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0027;AVGPOST=0.9986;RSQ=0.7938;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25232991 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7297;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25233031 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8524;ERATE=0.0004;THETA=0.0029;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25233046 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6620;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25233140 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6525;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25233148 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0070;AVGPOST=0.9996;RSQ=0.9753;ERATE=0.0004;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 25233410 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0046;AVGPOST=0.9981;RSQ=0.8249;ERATE=0.0007;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25233660 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0145;AVGPOST=0.9997;RSQ=0.9916;ERATE=0.0003;THETA=0.0006;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 25233729 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.8416;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25233935 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25234062 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4896;AVGPOST=0.9984;RSQ=0.9977;ERATE=0.0004;THETA=0.0005;AC=1070;AN=2184 GT:DS:GL:BD 0.48992673 0
1 25234066 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25234096 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0096;AVGPOST=0.9998;RSQ=0.9892;ERATE=0.0004;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 25234129 . CA C 127 PASS INDEL;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0021;AVGPOST=0.9968;RSQ=0.4587;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25234156 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.979;LDAF=0.1335;AVGPOST=0.9955;RSQ=0.9868;ERATE=0.0004;THETA=0.0003;AC=292;AN=2184 GT:DS:GL:BD 0.13369964 0
1 25234163 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0023;AVGPOST=0.9979;RSQ=0.6534;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25234188 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0222;AVGPOST=0.9970;RSQ=0.9453;ERATE=0.0005;THETA=0.0003;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 25234207 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.759;LDAF=0.0222;AVGPOST=0.9890;RSQ=0.7909;ERATE=0.0005;THETA=0.0009;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 25234307 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0220;AVGPOST=0.9982;RSQ=0.9653;ERATE=0.0003;THETA=0.0009;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 25234381 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.900;LDAF=0.0538;AVGPOST=0.9853;RSQ=0.8959;ERATE=0.0004;THETA=0.0024;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 25234449 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0051;AVGPOST=0.9983;RSQ=0.8777;ERATE=0.0004;THETA=0.0032;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25234464 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.617;LDAF=0.0041;AVGPOST=0.9952;RSQ=0.5128;ERATE=0.0015;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25234483 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0037;AVGPOST=0.9987;RSQ=0.8621;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25234489 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.975;LDAF=0.4997;AVGPOST=0.9669;RSQ=0.9515;ERATE=0.0092;THETA=0.0004;AC=1095;AN=2184 GT:DS:GL:BD 0.50137365 1
1 25234507 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4680;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25234515 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.987;LDAF=0.5010;AVGPOST=0.9914;RSQ=0.9893;ERATE=0.0007;THETA=0.0005;AC=1095;AN=2184 GT:DS:GL:BD 0.50137365 1
1 25234524 . CCA C 1139 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=0.9990;RSQ=0.9495;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 25234550 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7433;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25234566 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0112;AVGPOST=0.9988;RSQ=0.9563;ERATE=0.0004;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 25234624 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.863;BRSQ=0.544;LDAF=0.2223;AVGPOST=0.8258;RSQ=0.5547;ERATE=0.0734;THETA=0.0009;AC=370;AN=2184 GT:DS:GL:BD 0.16941392 0
1 25234639 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.897;LDAF=0.0237;AVGPOST=0.9916;RSQ=0.8687;ERATE=0.0006;THETA=0.0022;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 25234668 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.940;BRSQ=0.890;LDAF=0.5209;AVGPOST=0.8694;RSQ=0.8037;ERATE=0.0351;THETA=0.0003;AC=1167;AN=2184 GT:DS:GL:BD 0.53434068 1
1 25234757 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4936;ERATE=0.0007;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25234764 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0076;AVGPOST=0.9994;RSQ=0.9630;ERATE=0.0003;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 25234765 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.906;LDAF=0.0415;AVGPOST=0.9828;RSQ=0.8374;ERATE=0.0046;THETA=0.0003;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 25234779 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.711;LDAF=0.0269;AVGPOST=0.9754;RSQ=0.6441;ERATE=0.0052;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 25234781 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.5474;AVGPOST=0.9957;RSQ=0.9941;ERATE=0.0006;THETA=0.0006;AC=1198;AN=2184 GT:DS:GL:BD 0.54853481 1
1 25234790 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0095;AVGPOST=0.9981;RSQ=0.9158;ERATE=0.0005;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 25234810 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0223;AVGPOST=0.9984;RSQ=0.9698;ERATE=0.0003;THETA=0.0003;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 25234904 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.852;LDAF=0.0066;AVGPOST=0.9967;RSQ=0.7819;ERATE=0.0007;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25234970 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0024;AVGPOST=0.9980;RSQ=0.6251;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25234982 . A AC 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.6426;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25234988 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0038;AVGPOST=0.9980;RSQ=0.8280;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25235029 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.797;LDAF=0.0033;AVGPOST=0.9979;RSQ=0.7700;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25235108 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.4891;AVGPOST=0.9963;RSQ=0.9940;ERATE=0.0006;THETA=0.0004;AC=1069;AN=2184 GT:DS:GL:BD 0.48946887 0
1 25235137 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0247;AVGPOST=0.9982;RSQ=0.9687;ERATE=0.0005;THETA=0.0005;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 25235225 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0037;AVGPOST=0.9964;RSQ=0.7088;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25235320 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0073;AVGPOST=0.9999;RSQ=0.9940;ERATE=0.0003;THETA=0.0011;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 25235328 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6043;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25235412 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25235666 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0073;AVGPOST=0.9999;RSQ=0.9940;ERATE=0.0003;THETA=0.0008;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 25235690 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.876;LDAF=0.0127;AVGPOST=0.9965;RSQ=0.8888;ERATE=0.0005;THETA=0.0006;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 25235800 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9998;RSQ=0.9883;ERATE=0.0003;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 25235818 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0088;AVGPOST=0.9995;RSQ=0.9719;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 25235843 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0076;AVGPOST=0.9995;RSQ=0.9796;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 25235917 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6405;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25236012 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0004;AVGPOST=0.9993;RSQ=0.3968;ERATE=0.0003;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 25236055 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6602;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25236252 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.770;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5358;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25236297 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5715;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25236442 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.583;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5788;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25236846 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.873;LDAF=0.0027;AVGPOST=0.9993;RSQ=0.8717;ERATE=0.0006;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25236910 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5415;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25236934 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.927;LDAF=0.9579;AVGPOST=0.9928;RSQ=0.9273;ERATE=0.0007;THETA=0.0004;AC=2096;AN=2184 GT:DS:GL:BD 0.95970696 1
1 25237061 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0093;AVGPOST=0.9995;RSQ=0.9747;ERATE=0.0003;THETA=0.0007;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 25237086 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25237335 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.886;LDAF=0.0101;AVGPOST=0.9967;RSQ=0.8698;ERATE=0.0004;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 25237405 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.739;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6334;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25237442 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8177;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25237487 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5840;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25237503 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0068;AVGPOST=0.9986;RSQ=0.9197;ERATE=0.0004;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 25237507 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6714;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25237660 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.914;LDAF=0.0116;AVGPOST=0.9984;RSQ=0.9399;ERATE=0.0005;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 25237811 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0305;AVGPOST=0.9987;RSQ=0.9839;ERATE=0.0003;THETA=0.0003;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 25237986 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.3470;AVGPOST=0.9947;RSQ=0.9908;ERATE=0.0005;THETA=0.0012;AC=757;AN=2184 GT:DS:GL:BD 0.34661171 0
1 25238040 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.931;LDAF=0.0246;AVGPOST=0.9960;RSQ=0.9378;ERATE=0.0003;THETA=0.0003;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 25238082 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0021;AVGPOST=0.9991;RSQ=0.7970;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25238196 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5467;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25238262 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6436;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25238282 . C CATG 394 PASS INDEL;BAVGPOST=0.999;BRSQ=0.754;LDAF=0.0038;AVGPOST=0.9945;RSQ=0.4452;ERATE=0.0010;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25238352 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0354;AVGPOST=0.9984;RSQ=0.9797;ERATE=0.0006;THETA=0.0004;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 25238631 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.5404;AVGPOST=0.9967;RSQ=0.9952;ERATE=0.0008;THETA=0.0006;AC=1183;AN=2184 GT:DS:GL:BD 0.54166669 1
1 25238790 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0023;AVGPOST=0.9975;RSQ=0.5745;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25238964 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0354;AVGPOST=0.9993;RSQ=0.9907;ERATE=0.0005;THETA=0.0003;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 25239017 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0066;AVGPOST=0.9993;RSQ=0.9518;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 25239165 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.743;LDAF=0.0055;AVGPOST=0.9977;RSQ=0.8424;ERATE=0.0005;THETA=0.0012;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25239289 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.982;LDAF=0.0992;AVGPOST=0.9970;RSQ=0.9879;ERATE=0.0004;THETA=0.0007;AC=215;AN=2184 GT:DS:GL:BD 0.09844323 0
1 25239361 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.6325;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25239362 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.829;LDAF=0.0083;AVGPOST=0.9967;RSQ=0.8452;ERATE=0.0004;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 25239379 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0036;AVGPOST=0.9989;RSQ=0.8949;ERATE=0.0005;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25239382 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25239619 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25239913 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6351;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25239951 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0346;AVGPOST=0.9990;RSQ=0.9901;ERATE=0.0003;THETA=0.0008;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 25239952 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25240105 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8681;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25240166 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.6290;ERATE=0.0007;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25240341 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.5344;AVGPOST=0.9931;RSQ=0.9903;ERATE=0.0009;THETA=0.0008;AC=1172;AN=2184 GT:DS:GL:BD 0.53663003 1
1 25240356 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9169;ERATE=0.0003;THETA=0.0036;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25240601 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.854;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6643;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25240804 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.934;LDAF=0.0180;AVGPOST=0.9955;RSQ=0.8927;ERATE=0.0007;THETA=0.0045;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 25241056 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.954;LDAF=0.3901;AVGPOST=0.9627;RSQ=0.9383;ERATE=0.0049;THETA=0.0012;AC=845;AN=2184 GT:DS:GL:BD 0.38690478 0
1 25241090 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.979;LDAF=0.6022;AVGPOST=0.9790;RSQ=0.9703;ERATE=0.0010;THETA=0.0005;AC=1317;AN=2184 GT:DS:GL:BD 0.60302198 1
1 25241116 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.948;LDAF=0.4534;AVGPOST=0.9659;RSQ=0.9505;ERATE=0.0026;THETA=0.0017;AC=988;AN=2184 GT:DS:GL:BD 0.45238096 0
1 25241422 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.842;LDAF=0.0077;AVGPOST=0.9980;RSQ=0.8973;ERATE=0.0003;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 25241431 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0074;AVGPOST=0.9995;RSQ=0.9675;ERATE=0.0003;THETA=0.0079;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 25241435 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8136;ERATE=0.0003;THETA=0.0117;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25241573 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.592;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6555;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25241631 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7955;ERATE=0.0004;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25241637 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.750;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.6247;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25241669 rs5773115 C CT 5615 PASS INDEL;BAVGPOST=0.984;BRSQ=0.889;LDAF=0.0657;AVGPOST=0.9876;RSQ=0.9276;ERATE=0.0010;THETA=0.0017;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 25241672 . T TC 493 PASS INDEL;BAVGPOST=0.872;BRSQ=0.354;LDAF=0.1108;AVGPOST=0.9019;RSQ=0.5954;ERATE=0.0031;THETA=0.0024;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 25241902 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.684;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.5669;ERATE=0.0007;THETA=0.0067;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25242011 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0045;AVGPOST=0.9993;RSQ=0.9290;ERATE=0.0003;THETA=0.0013;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25242014 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7797;ERATE=0.0004;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25242039 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.691;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5882;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25242076 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7393;ERATE=0.0003;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25242193 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1184;AVGPOST=0.9965;RSQ=0.9905;ERATE=0.0006;THETA=0.0007;AC=257;AN=2184 GT:DS:GL:BD 0.11767399 0
1 25242297 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.836;LDAF=0.0031;AVGPOST=0.9980;RSQ=0.7500;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25242477 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.5371;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25242576 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.963;LDAF=0.0725;AVGPOST=0.9904;RSQ=0.9519;ERATE=0.0005;THETA=0.0003;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 25242689 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5436;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25242706 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.625;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6082;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25242718 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.750;LDAF=0.0022;AVGPOST=0.9981;RSQ=0.6390;ERATE=0.0004;THETA=0.0030;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25242730 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1258;AVGPOST=0.9984;RSQ=0.9957;ERATE=0.0006;THETA=0.0013;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 25242888 . CG C 2369 PASS INDEL;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0240;AVGPOST=0.9967;RSQ=0.9429;ERATE=0.0005;THETA=0.0005;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 25242926 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1251;AVGPOST=0.9994;RSQ=0.9986;ERATE=0.0003;THETA=0.0007;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 25243010 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0266;AVGPOST=0.9969;RSQ=0.9586;ERATE=0.0004;THETA=0.0009;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 25243149 . T TG 179 PASS INDEL;BAVGPOST=0.989;BRSQ=0.554;LDAF=0.0170;AVGPOST=0.9815;RSQ=0.5698;ERATE=0.0041;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 25243194 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1250;AVGPOST=0.9981;RSQ=0.9944;ERATE=0.0006;THETA=0.0010;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 25243282 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0024;AVGPOST=0.9994;RSQ=0.8876;ERATE=0.0004;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25243474 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1221;AVGPOST=0.9967;RSQ=0.9911;ERATE=0.0004;THETA=0.0006;AC=264;AN=2184 GT:DS:GL:BD 0.12087912 0
1 25243554 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.929;LDAF=0.1118;AVGPOST=0.9794;RSQ=0.9279;ERATE=0.0005;THETA=0.0009;AC=239;AN=2184 GT:DS:GL:BD 0.10943224 0
1 25243555 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0037;AVGPOST=0.9990;RSQ=0.9104;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25243598 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1253;AVGPOST=0.9978;RSQ=0.9936;ERATE=0.0008;THETA=0.0007;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 25243653 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9448;ERATE=0.0004;THETA=0.0041;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25243675 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.975;LDAF=0.3497;AVGPOST=0.9820;RSQ=0.9741;ERATE=0.0006;THETA=0.0005;AC=761;AN=2184 GT:DS:GL:BD 0.34844321 0
1 25243767 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.968;LDAF=0.4809;AVGPOST=0.9785;RSQ=0.9677;ERATE=0.0009;THETA=0.0027;AC=1046;AN=2184 GT:DS:GL:BD 0.47893772 0
1 25243768 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.637;LDAF=0.0052;AVGPOST=0.9944;RSQ=0.5560;ERATE=0.0008;THETA=0.0016;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25243857 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5634;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25243886 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0041;AVGPOST=0.9999;RSQ=0.9841;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25243928 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9235;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25243960 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.903;LDAF=0.0111;AVGPOST=0.9969;RSQ=0.8943;ERATE=0.0007;THETA=0.0026;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 25243978 . CAT C 163 PASS INDEL;BAVGPOST=1.000;BRSQ=0.698;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.4531;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25243987 . C CTCAG 326 PASS INDEL;BAVGPOST=0.999;BRSQ=0.717;LDAF=0.0028;AVGPOST=0.9970;RSQ=0.5090;ERATE=0.0008;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25243989 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0060;AVGPOST=0.9998;RSQ=0.9817;ERATE=0.0003;THETA=0.0016;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 25244017 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.762;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7610;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25244022 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9204;ERATE=0.0005;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25244110 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25244111 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6365;ERATE=0.0004;THETA=0.0026;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25244234 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.688;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.5939;ERATE=0.0009;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25244264 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0004;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25244309 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0040;AVGPOST=0.9985;RSQ=0.8615;ERATE=0.0008;THETA=0.0012;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25244340 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.4593;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25244583 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.657;LDAF=0.0021;AVGPOST=0.9983;RSQ=0.6431;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25244658 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0062;AVGPOST=0.9993;RSQ=0.9475;ERATE=0.0004;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 25244706 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.972;LDAF=0.0513;AVGPOST=0.9941;RSQ=0.9586;ERATE=0.0005;THETA=0.0018;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 25244717 . TAGGCCTCCTGCCCC T 951 PASS INDEL;BAVGPOST=0.983;BRSQ=0.652;LDAF=0.0213;AVGPOST=0.9911;RSQ=0.8262;ERATE=0.0007;THETA=0.0033;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 25244795 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6228;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25245077 . TTCAG T 132383 PASS INDEL;BAVGPOST=1.000;BRSQ=0;LDAF=0.9993;AVGPOST=0.9986;RSQ=0.2757;ERATE=0.0003;THETA=0.0013;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 25245081 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.965;BRSQ=0.891;LDAF=0.8387;AVGPOST=0.9465;RSQ=0.8545;ERATE=0.0161;THETA=0.0101;AC=1861;AN=2184 GT:DS:GL:BD 0.85210621 1
1 25245082 . TCAG T 518 PASS INDEL;BAVGPOST=0.982;BRSQ=0.733;LDAF=0.0347;AVGPOST=0.9743;RSQ=0.7048;ERATE=0.0044;THETA=0.0026;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 25245085 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.919;LDAF=0.0600;AVGPOST=0.9830;RSQ=0.8906;ERATE=0.0045;THETA=0.0034;AC=123;AN=2184 GT:DS:GL:BD 0.05631868 0
1 25245089 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5797;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25245097 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.949;LDAF=0.0324;AVGPOST=0.9899;RSQ=0.8838;ERATE=0.0008;THETA=0.0040;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 25245137 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0045;AVGPOST=0.9994;RSQ=0.9485;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25245140 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0047;AVGPOST=0.9996;RSQ=0.9632;ERATE=0.0003;THETA=0.0021;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25245197 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25245324 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0045;AVGPOST=0.9992;RSQ=0.9273;ERATE=0.0007;THETA=0.0017;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25245519 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25245524 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25245537 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8739;ERATE=0.0011;THETA=0.0015;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25245559 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.862;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8456;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25245678 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0472;AVGPOST=0.9997;RSQ=0.9969;ERATE=0.0003;THETA=0.0004;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 25245700 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8839;ERATE=0.0004;THETA=0.0064;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25245719 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25245952 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0004;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25245972 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0106;AVGPOST=0.9997;RSQ=0.9877;ERATE=0.0003;THETA=0.0037;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 25246036 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5995;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25246038 . CA C 107 PASS INDEL;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7531;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25246055 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.5942;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25246065 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0249;AVGPOST=0.9986;RSQ=0.9769;ERATE=0.0006;THETA=0.0051;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 25246170 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8497;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25246188 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0059;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25246249 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8552;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25246249 . C CA 394 PASS INDEL;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0065;AVGPOST=0.9979;RSQ=0.8829;ERATE=0.0006;THETA=0.0020;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 25246251 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.776;LDAF=0.0014;AVGPOST=0.9979;RSQ=0.4659;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25246650 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0025;AVGPOST=0.9988;RSQ=0.8049;ERATE=0.0004;THETA=0.0097;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25246885 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.643;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4084;ERATE=0.0005;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25246900 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0061;AVGPOST=0.9977;RSQ=0.8383;ERATE=0.0004;THETA=0.0059;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 25246968 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.731;LDAF=0.0017;AVGPOST=0.9980;RSQ=0.4837;ERATE=0.0004;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25247000 . ACT A 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8664;ERATE=0.0004;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25247169 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.896;LDAF=0.0092;AVGPOST=0.9982;RSQ=0.9127;ERATE=0.0005;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 25247304 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25247345 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9177;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25247354 . TG T 214 PASS INDEL;BAVGPOST=0.998;BRSQ=0.860;LDAF=0.0053;AVGPOST=0.9974;RSQ=0.8058;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25247417 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8688;ERATE=0.0004;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25247434 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0021;AVGPOST=0.9989;RSQ=0.8072;ERATE=0.0003;THETA=0.0015;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25247440 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.806;LDAF=0.0063;AVGPOST=0.9966;RSQ=0.7891;ERATE=0.0004;THETA=0.0028;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 25247502 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6565;ERATE=0.0005;THETA=0.0045;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25247545 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.826;LDAF=0.0104;AVGPOST=0.9969;RSQ=0.8910;ERATE=0.0005;THETA=0.0021;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 25247668 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25247791 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0004;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25248273 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.798;LDAF=0.0056;AVGPOST=0.9973;RSQ=0.8334;ERATE=0.0003;THETA=0.0027;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 25248277 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.725;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6252;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25248469 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7719;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25248567 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5276;ERATE=0.0006;THETA=0.0050;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25248602 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0427;AVGPOST=0.9981;RSQ=0.9827;ERATE=0.0004;THETA=0.0009;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 25248629 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8699;ERATE=0.0004;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25248641 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25248806 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7200;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25248833 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6077;ERATE=0.0004;THETA=0.0120;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25249156 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8839;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25249179 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6373;ERATE=0.0004;THETA=0.0034;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25249242 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.670;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25249252 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.5305;AVGPOST=0.9775;RSQ=0.9640;ERATE=0.0021;THETA=0.0009;AC=1164;AN=2184 GT:DS:GL:BD 0.53296703 1
1 25249314 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.5892;ERATE=0.0007;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25249502 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0035;AVGPOST=0.9992;RSQ=0.9042;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25249584 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0383;AVGPOST=0.9989;RSQ=0.9883;ERATE=0.0003;THETA=0.0003;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 25249607 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0034;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25249688 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.0440;AVGPOST=0.9996;RSQ=0.9964;ERATE=0.0004;THETA=0.0010;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 25249774 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.970;LDAF=0.0350;AVGPOST=0.9988;RSQ=0.9852;ERATE=0.0005;THETA=0.0005;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 25249776 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.963;LDAF=0.0367;AVGPOST=0.9981;RSQ=0.9813;ERATE=0.0004;THETA=0.0006;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 25249841 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.6135;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25249936 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25250009 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0087;AVGPOST=0.9994;RSQ=0.9727;ERATE=0.0003;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 25250084 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6262;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25250155 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.466;LDAF=0.0064;AVGPOST=0.9938;RSQ=0.6033;ERATE=0.0015;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25250286 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5571;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25250313 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0092;AVGPOST=0.9998;RSQ=0.9907;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 25250350 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6106;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25250428 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.710;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6434;ERATE=0.0005;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25250463 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4426;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25250533 rs34436022 CA C 52230 PASS INDEL;BAVGPOST=0.984;BRSQ=0.970;LDAF=0.5296;AVGPOST=0.9912;RSQ=0.9853;ERATE=0.0007;THETA=0.0002;AC=1154;AN=2184 GT:DS:GL:BD 0.52838826 1
1 25250535 . AT A 3159 PASS INDEL;BAVGPOST=0.942;BRSQ=0.891;LDAF=0.4866;AVGPOST=0.9308;RSQ=0.8943;ERATE=0.0037;THETA=0.0027;AC=1086;AN=2184 GT:DS:GL:BD 0.49725273 0
1 25250689 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25250691 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0044;AVGPOST=0.9984;RSQ=0.8622;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25250830 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4617;AVGPOST=0.9939;RSQ=0.9904;ERATE=0.0008;THETA=0.0010;AC=1009;AN=2184 GT:DS:GL:BD 0.46199635 0
1 25250834 . AGAGC A 35 PASS INDEL;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4541;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25250837 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.646;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4503;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25250839 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.982;LDAF=0.0372;AVGPOST=0.9984;RSQ=0.9849;ERATE=0.0004;THETA=0.0007;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 25250853 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0401;AVGPOST=0.9985;RSQ=0.9839;ERATE=0.0004;THETA=0.0004;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 25250916 . A AG 1842 PASS INDEL;BAVGPOST=0.806;BRSQ=0.596;LDAF=0.2762;AVGPOST=0.8080;RSQ=0.6528;ERATE=0.0200;THETA=0.0004;AC=604;AN=2184 GT:DS:GL:BD 0.27655679 0
1 25250998 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.7164;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25251267 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.974;LDAF=0.0391;AVGPOST=0.9993;RSQ=0.9937;ERATE=0.0004;THETA=0.0006;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 25251326 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4789;AVGPOST=0.9984;RSQ=0.9974;ERATE=0.0007;THETA=0.0009;AC=1044;AN=2184 GT:DS:GL:BD 0.47802198 0
1 25251424 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5301;AVGPOST=0.9980;RSQ=0.9967;ERATE=0.0005;THETA=0.0003;AC=1158;AN=2184 GT:DS:GL:BD 0.53021979 1
1 25251456 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5307;AVGPOST=0.9986;RSQ=0.9974;ERATE=0.0006;THETA=0.0008;AC=1159;AN=2184 GT:DS:GL:BD 0.53067768 1
1 25251706 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5265;AVGPOST=0.9980;RSQ=0.9965;ERATE=0.0006;THETA=0.0005;AC=1149;AN=2184 GT:DS:GL:BD 0.52609891 1
1 25251730 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6279;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25251769 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0018;AVGPOST=0.9986;RSQ=0.7227;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25251816 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.610;LDAF=0.0033;AVGPOST=0.9971;RSQ=0.6400;ERATE=0.0006;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25251923 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4237;AVGPOST=0.9979;RSQ=0.9971;ERATE=0.0004;THETA=0.0008;AC=923;AN=2184 GT:DS:GL:BD 0.42261904 0
1 25251938 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0395;AVGPOST=0.9995;RSQ=0.9945;ERATE=0.0004;THETA=0.0006;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 25251941 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0383;AVGPOST=0.9997;RSQ=0.9972;ERATE=0.0003;THETA=0.0005;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 25252021 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25252272 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4912;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25252336 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25252358 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.749;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7186;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25252420 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0041;AVGPOST=0.9995;RSQ=0.9473;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25252448 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6695;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25252493 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0021;AVGPOST=0.9987;RSQ=0.7688;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25252539 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7189;ERATE=0.0006;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25252570 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.674;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5104;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25252652 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0167;AVGPOST=0.9985;RSQ=0.9616;ERATE=0.0004;THETA=0.0011;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 25252671 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0394;AVGPOST=0.9997;RSQ=0.9962;ERATE=0.0003;THETA=0.0004;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 25252723 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0170;AVGPOST=0.9993;RSQ=0.9804;ERATE=0.0003;THETA=0.0008;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 25252801 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25252854 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5764;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25252878 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25252935 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.7074;ERATE=0.0003;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25253124 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25253141 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.6976;ERATE=0.0007;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25253289 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8810;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25253426 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0049;AVGPOST=0.9994;RSQ=0.9431;ERATE=0.0010;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25253600 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6862;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25253861 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25253883 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0022;AVGPOST=0.9999;RSQ=0.9736;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25253907 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25253969 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0007;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25254033 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25254063 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25254125 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25254129 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25254204 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0074;AVGPOST=0.9998;RSQ=0.9880;ERATE=0.0006;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 25254224 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25254244 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25254317 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.5296;AVGPOST=0.9963;RSQ=0.9937;ERATE=0.0023;THETA=0.0008;AC=1157;AN=2184 GT:DS:GL:BD 0.52976191 1
1 25254535 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.646;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8236;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25254553 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.832;LDAF=0.0038;AVGPOST=0.9989;RSQ=0.8708;ERATE=0.0004;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25254587 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25254747 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6814;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25254828 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0043;AVGPOST=0.9980;RSQ=0.8122;ERATE=0.0006;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25254856 . GC G 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.683;LDAF=0.0023;AVGPOST=0.9964;RSQ=0.3460;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25254885 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0400;AVGPOST=0.9984;RSQ=0.9808;ERATE=0.0005;THETA=0.0003;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 25255208 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5809;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25255494 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0033;AVGPOST=0.9987;RSQ=0.8373;ERATE=0.0006;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25255724 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.571;LDAF=0.0034;AVGPOST=0.9971;RSQ=0.6152;ERATE=0.0007;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25255850 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.0442;AVGPOST=0.9971;RSQ=0.9732;ERATE=0.0005;THETA=0.0004;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 25255982 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.725;LDAF=0.0105;AVGPOST=0.9967;RSQ=0.8790;ERATE=0.0004;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 25256035 . AGCCCCAGGGCCGGC A 2704 PASS INDEL;BAVGPOST=0.990;BRSQ=0.876;LDAF=0.0400;AVGPOST=0.9942;RSQ=0.9351;ERATE=0.0010;THETA=0.0002;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 25256049 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.741;LDAF=0.0094;AVGPOST=0.9950;RSQ=0.7886;ERATE=0.0005;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 25256123 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7425;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25256444 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.820;BRSQ=0.658;LDAF=0.4577;AVGPOST=0.8785;RSQ=0.8094;ERATE=0.0058;THETA=0.0005;AC=1031;AN=2184 GT:DS:GL:BD 0.47206959 0
1 25256974 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0077;AVGPOST=0.9942;RSQ=0.6915;ERATE=0.0010;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25257040 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.748;LDAF=0.0163;AVGPOST=0.9851;RSQ=0.6267;ERATE=0.0007;THETA=0.0011;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 25257147 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.523;LDAF=0.0082;AVGPOST=0.9869;RSQ=0.3417;ERATE=0.0019;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25257282 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.969;LDAF=0.0191;AVGPOST=0.9972;RSQ=0.9389;ERATE=0.0007;THETA=0.0005;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 25257493 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.730;LDAF=0.0027;AVGPOST=0.9982;RSQ=0.6937;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25257753 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.693;LDAF=0.0165;AVGPOST=0.9910;RSQ=0.7882;ERATE=0.0008;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 25257884 . AC A 91 PASS INDEL;BAVGPOST=0.999;BRSQ=0.623;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.3521;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25257915 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.981;LDAF=0.0452;AVGPOST=0.9954;RSQ=0.9589;ERATE=0.0006;THETA=0.0003;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 25258172 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.679;LDAF=0.0084;AVGPOST=0.9925;RSQ=0.6379;ERATE=0.0006;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 25258214 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0051;AVGPOST=0.9970;RSQ=0.7734;ERATE=0.0005;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25258249 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.9947;AVGPOST=0.9964;RSQ=0.7333;ERATE=0.0004;THETA=0.0004;AC=2174;AN=2184 GT:DS:GL:BD 0.99542123 1
1 25258301 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5320;AVGPOST=0.9911;RSQ=0.9848;ERATE=0.0012;THETA=0.0005;AC=1160;AN=2184 GT:DS:GL:BD 0.53113556 1
1 25258390 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.912;LDAF=0.0107;AVGPOST=0.9948;RSQ=0.8351;ERATE=0.0005;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 25258585 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5267;AVGPOST=0.9889;RSQ=0.9818;ERATE=0.0016;THETA=0.0002;AC=1152;AN=2184 GT:DS:GL:BD 0.52747256 1
1 25258593 . TG T 10 PASS INDEL;BAVGPOST=0.999;BRSQ=0.549;LDAF=0.0021;AVGPOST=0.9965;RSQ=0.2542;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25258653 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.744;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4354;ERATE=0.0007;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25258867 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.877;BRSQ=0.748;LDAF=0.5439;AVGPOST=0.9676;RSQ=0.9466;ERATE=0.0014;THETA=0.0014;AC=1168;AN=2184 GT:DS:GL:BD 0.53479856 1
1 25259150 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.552;LDAF=0.0315;AVGPOST=0.9625;RSQ=0.5077;ERATE=0.0143;THETA=0.0012;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 25259296 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.896;LDAF=0.0043;AVGPOST=0.9980;RSQ=0.8110;ERATE=0.0005;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25259334 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6763;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25259454 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25259477 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.634;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.6109;ERATE=0.0007;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25259612 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6259;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25259857 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25259884 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.5256;AVGPOST=0.9958;RSQ=0.9933;ERATE=0.0007;THETA=0.0004;AC=1145;AN=2184 GT:DS:GL:BD 0.52426738 1
1 25260152 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0040;AVGPOST=0.9984;RSQ=0.8320;ERATE=0.0008;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25260165 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7941;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25260217 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.8193;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25260218 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0111;AVGPOST=0.9974;RSQ=0.9143;ERATE=0.0005;THETA=0.0007;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 25260323 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8716;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25260348 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0045;AVGPOST=0.9988;RSQ=0.8803;ERATE=0.0009;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25260462 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.738;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6525;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25260927 . GGT G 17 PASS INDEL;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0021;AVGPOST=0.9973;RSQ=0.4252;ERATE=0.0007;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25260948 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.827;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9149;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25260988 . GC G 40 PASS INDEL;BAVGPOST=1.000;BRSQ=0.716;LDAF=0.0031;AVGPOST=0.9959;RSQ=0.3959;ERATE=0.0009;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25261099 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0045;AVGPOST=0.9982;RSQ=0.8589;ERATE=0.0005;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25261109 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.643;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25261155 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25261156 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0087;AVGPOST=0.9999;RSQ=0.9923;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 25261203 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5315;AVGPOST=0.9983;RSQ=0.9972;ERATE=0.0003;THETA=0.0003;AC=1161;AN=2184 GT:DS:GL:BD 0.53159338 1
1 25261230 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25261236 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0087;AVGPOST=0.9998;RSQ=0.9899;ERATE=0.0003;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 25261262 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7567;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25261282 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25261328 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0013;AVGPOST=0.9996;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25261386 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5251;AVGPOST=0.9974;RSQ=0.9962;ERATE=0.0005;THETA=0.0004;AC=1145;AN=2184 GT:DS:GL:BD 0.52426738 1
1 25261696 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5320;AVGPOST=0.9986;RSQ=0.9976;ERATE=0.0004;THETA=0.0010;AC=1161;AN=2184 GT:DS:GL:BD 0.53159338 1
1 25261740 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5311;AVGPOST=0.9971;RSQ=0.9949;ERATE=0.0005;THETA=0.0015;AC=1161;AN=2184 GT:DS:GL:BD 0.53159338 1
1 25261855 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4728;ERATE=0.0004;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25261929 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0037;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25261960 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.4575;AVGPOST=0.9927;RSQ=0.9903;ERATE=0.0004;THETA=0.0006;AC=999;AN=2184 GT:DS:GL:BD 0.45741758 0
1 25262022 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.4231;AVGPOST=0.9939;RSQ=0.9925;ERATE=0.0004;THETA=0.0023;AC=923;AN=2184 GT:DS:GL:BD 0.42261904 0
1 25262023 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6850;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25262075 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0041;AVGPOST=0.9981;RSQ=0.8084;ERATE=0.0005;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25262114 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0085;AVGPOST=0.9984;RSQ=0.9194;ERATE=0.0006;THETA=0.0030;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 25262264 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6112;ERATE=0.0004;THETA=0.0063;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25262279 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.899;LDAF=0.0114;AVGPOST=0.9984;RSQ=0.9337;ERATE=0.0005;THETA=0.0049;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 25262362 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.791;LDAF=0.0061;AVGPOST=0.9973;RSQ=0.8584;ERATE=0.0003;THETA=0.0013;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 25262401 . GA G 4080 PASS INDEL;BAVGPOST=0.996;BRSQ=0.961;LDAF=0.0426;AVGPOST=0.9971;RSQ=0.9706;ERATE=0.0005;THETA=0.0015;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 25262412 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.923;LDAF=0.0061;AVGPOST=0.9978;RSQ=0.8501;ERATE=0.0004;THETA=0.0029;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 25262448 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.5984;ERATE=0.0005;THETA=0.0069;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25262812 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0042;AVGPOST=0.9997;RSQ=0.9643;ERATE=0.0003;THETA=0.0032;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25262897 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6526;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25262982 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25263003 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7530;ERATE=0.0006;THETA=0.0053;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25263043 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0146;AVGPOST=0.9991;RSQ=0.9733;ERATE=0.0003;THETA=0.0035;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 25263151 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0078;AVGPOST=0.9992;RSQ=0.9536;ERATE=0.0005;THETA=0.0094;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 25263245 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0329;AVGPOST=0.9981;RSQ=0.9798;ERATE=0.0003;THETA=0.0012;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 25263306 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0055;AVGPOST=0.9984;RSQ=0.8884;ERATE=0.0009;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25263370 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0038;AVGPOST=0.9995;RSQ=0.9368;ERATE=0.0004;THETA=0.0034;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25263409 . A AC 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4395;ERATE=0.0004;THETA=0.0103;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25263465 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0059;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25263516 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6168;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25263579 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.635;LDAF=0.0025;AVGPOST=0.9963;RSQ=0.4052;ERATE=0.0008;THETA=0.0022;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25263822 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0043;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25263833 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0066;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25263841 . GC G 77 PASS INDEL;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0022;AVGPOST=0.9975;RSQ=0.5227;ERATE=0.0004;THETA=0.0102;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25263997 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.948;LDAF=0.1626;AVGPOST=0.9841;RSQ=0.9576;ERATE=0.0009;THETA=0.0124;AC=349;AN=2184 GT:DS:GL:BD 0.15979853 0
1 25264162 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.957;BRSQ=0.927;LDAF=0.6458;AVGPOST=0.9559;RSQ=0.9313;ERATE=0.0228;THETA=0.0224;AC=1414;AN=2184 GT:DS:GL:BD 0.64743590 1
1 25264289 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.943;LDAF=0.0190;AVGPOST=0.9966;RSQ=0.9262;ERATE=0.0008;THETA=0.0203;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 25264294 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8190;ERATE=0.0003;THETA=0.0177;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25264327 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.946;LDAF=0.0189;AVGPOST=0.9967;RSQ=0.9360;ERATE=0.0011;THETA=0.0117;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 25264438 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0041;AVGPOST=0.9996;RSQ=0.9625;ERATE=0.0004;THETA=0.0163;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25264576 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5792;ERATE=0.0004;THETA=0.0146;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25264658 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.965;BRSQ=0.919;LDAF=0.7525;AVGPOST=0.9573;RSQ=0.9133;ERATE=0.0052;THETA=0.0038;AC=1657;AN=2184 GT:DS:GL:BD 0.75869966 1
1 25264848 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7664;ERATE=0.0006;THETA=0.0061;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25264853 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.976;LDAF=0.0652;AVGPOST=0.9961;RSQ=0.9773;ERATE=0.0003;THETA=0.0011;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 25264944 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8859;ERATE=0.0003;THETA=0.0035;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25264951 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7130;ERATE=0.0005;THETA=0.0077;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25264964 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0029;AVGPOST=0.9986;RSQ=0.8073;ERATE=0.0005;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25265000 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8481;ERATE=0.0003;THETA=0.0053;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25265008 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6589;ERATE=0.0004;THETA=0.0097;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25265011 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4694;ERATE=0.0005;THETA=0.0069;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25265052 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.769;LDAF=0.0037;AVGPOST=0.9978;RSQ=0.7381;ERATE=0.0005;THETA=0.0049;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25265097 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0071;AVGPOST=0.9994;RSQ=0.9635;ERATE=0.0007;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 25265174 . T TG 208 PASS INDEL;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0025;AVGPOST=0.9985;RSQ=0.7588;ERATE=0.0004;THETA=0.0014;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25265225 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8879;ERATE=0.0004;THETA=0.0064;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25265243 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5302;ERATE=0.0003;THETA=0.0048;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25265279 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.888;LDAF=0.0135;AVGPOST=0.9953;RSQ=0.8464;ERATE=0.0008;THETA=0.0030;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 25265280 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0116;AVGPOST=0.9953;RSQ=0.8586;ERATE=0.0005;THETA=0.0110;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 25265370 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0024;AVGPOST=0.9978;RSQ=0.6236;ERATE=0.0009;THETA=0.0025;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25265417 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.8038;ERATE=0.0004;THETA=0.0015;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25265639 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0077;AVGPOST=0.9991;RSQ=0.9583;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 25265681 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0066;AVGPOST=0.9990;RSQ=0.9378;ERATE=0.0004;THETA=0.0063;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 25265699 . C CAT 20 PASS INDEL;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4364;ERATE=0.0004;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25265753 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0102;AVGPOST=0.9997;RSQ=0.9881;ERATE=0.0004;THETA=0.0045;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 25265788 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.775;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25265858 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7232;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25266084 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7227;ERATE=0.0003;THETA=0.0095;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25266109 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0335;AVGPOST=0.9971;RSQ=0.9662;ERATE=0.0003;THETA=0.0014;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 25266117 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0023;AVGPOST=0.9987;RSQ=0.7547;ERATE=0.0006;THETA=0.0035;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25266331 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.940;LDAF=0.0106;AVGPOST=0.9979;RSQ=0.9298;ERATE=0.0003;THETA=0.0041;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 25266446 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0070;AVGPOST=0.9989;RSQ=0.9283;ERATE=0.0004;THETA=0.0028;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 25266452 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.712;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25266476 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.940;LDAF=0.1623;AVGPOST=0.9795;RSQ=0.9462;ERATE=0.0012;THETA=0.0068;AC=346;AN=2184 GT:DS:GL:BD 0.15842491 0
1 25266496 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.745;LDAF=0.0029;AVGPOST=0.9973;RSQ=0.6657;ERATE=0.0004;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25266543 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25266566 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.939;LDAF=0.0082;AVGPOST=0.9980;RSQ=0.9092;ERATE=0.0004;THETA=0.0011;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 25266575 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8278;ERATE=0.0003;THETA=0.0044;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25266721 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0441;AVGPOST=0.9985;RSQ=0.9865;ERATE=0.0003;THETA=0.0019;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 25266737 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0022;AVGPOST=0.9973;RSQ=0.5746;ERATE=0.0005;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25266757 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0063;AVGPOST=0.9984;RSQ=0.9093;ERATE=0.0006;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 25266888 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0060;AVGPOST=0.9992;RSQ=0.9471;ERATE=0.0005;THETA=0.0019;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 25267091 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9201;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25267104 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0060;AVGPOST=0.9990;RSQ=0.9351;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 25267206 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0111;AVGPOST=0.9979;RSQ=0.9196;ERATE=0.0005;THETA=0.0009;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 25267296 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5581;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25267332 . C CCT 1077 PASS INDEL;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0064;AVGPOST=0.9986;RSQ=0.8967;ERATE=0.0007;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 25267391 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0074;AVGPOST=0.9990;RSQ=0.9532;ERATE=0.0003;THETA=0.0011;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 25267456 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0019;AVGPOST=0.9996;RSQ=0.9002;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25267519 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.920;LDAF=0.0199;AVGPOST=0.9967;RSQ=0.9408;ERATE=0.0005;THETA=0.0007;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 25267743 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.855;LDAF=0.0034;AVGPOST=0.9978;RSQ=0.7273;ERATE=0.0004;THETA=0.0018;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25267922 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.6466;AVGPOST=0.9927;RSQ=0.9883;ERATE=0.0005;THETA=0.0006;AC=1413;AN=2184 GT:DS:GL:BD 0.64697802 1
1 25267934 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8410;ERATE=0.0005;THETA=0.0028;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25268163 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0003;AVGPOST=0.9995;RSQ=0.4425;ERATE=0.0004;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 25268289 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.941;LDAF=0.0268;AVGPOST=0.9932;RSQ=0.9043;ERATE=0.0006;THETA=0.0006;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 25268332 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7296;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25268416 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.8965;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25268665 . AG A 275 PASS INDEL;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0064;AVGPOST=0.9984;RSQ=0.9052;ERATE=0.0004;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 25268721 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9503;ERATE=0.0003;THETA=0.0022;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25268725 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0058;AVGPOST=0.9994;RSQ=0.9486;ERATE=0.0006;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 25269006 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9244;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25269033 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25269251 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0060;AVGPOST=0.9995;RSQ=0.9663;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 25269282 . GA G 445 PASS INDEL;BAVGPOST=0.996;BRSQ=0.601;LDAF=0.0056;AVGPOST=0.9953;RSQ=0.6663;ERATE=0.0005;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25269355 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.1037;AVGPOST=0.9948;RSQ=0.9771;ERATE=0.0006;THETA=0.0007;AC=223;AN=2184 GT:DS:GL:BD 0.10210623 0
1 25269437 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.969;LDAF=0.0702;AVGPOST=0.9902;RSQ=0.9461;ERATE=0.0006;THETA=0.0010;AC=151;AN=2184 GT:DS:GL:BD 0.06913920 0
1 25269741 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0059;AVGPOST=0.9987;RSQ=0.9146;ERATE=0.0005;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 25269870 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8483;ERATE=0.0008;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25270009 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.766;LDAF=0.0074;AVGPOST=0.9947;RSQ=0.7293;ERATE=0.0005;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 25270074 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5312;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25270100 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25270104 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.855;LDAF=0.0035;AVGPOST=0.9968;RSQ=0.7635;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25270179 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.6108;ERATE=0.0005;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25270251 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1025;AVGPOST=0.9946;RSQ=0.9784;ERATE=0.0006;THETA=0.0010;AC=221;AN=2184 GT:DS:GL:BD 0.10119048 0
1 25270344 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1438;AVGPOST=0.9971;RSQ=0.9905;ERATE=0.0007;THETA=0.0010;AC=314;AN=2184 GT:DS:GL:BD 0.14377290 0
1 25270446 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.709;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8316;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25270454 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8448;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25270482 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0028;AVGPOST=0.9991;RSQ=0.8772;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25270552 . T TA 1240 PASS INDEL;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0061;AVGPOST=0.9987;RSQ=0.9154;ERATE=0.0007;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 25270572 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.6443;AVGPOST=0.9940;RSQ=0.9900;ERATE=0.0003;THETA=0.0020;AC=1407;AN=2184 GT:DS:GL:BD 0.64423078 1
1 25270583 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0422;AVGPOST=0.9995;RSQ=0.9944;ERATE=0.0004;THETA=0.0007;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 25270831 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0398;AVGPOST=0.9989;RSQ=0.9891;ERATE=0.0003;THETA=0.0010;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 25270844 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0056;AVGPOST=0.9995;RSQ=0.9606;ERATE=0.0004;THETA=0.0010;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 25271015 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9713;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25271195 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.764;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25271222 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.0066;AVGPOST=0.9986;RSQ=0.9068;ERATE=0.0003;THETA=0.0020;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 25271292 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25271296 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25271352 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0451;AVGPOST=0.9991;RSQ=0.9917;ERATE=0.0004;THETA=0.0010;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 25271380 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7290;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25271456 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5845;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25271476 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25271504 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0056;AVGPOST=0.9999;RSQ=0.9898;ERATE=0.0006;THETA=0.0031;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 25271571 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9473;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25271682 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7196;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25271724 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.790;LDAF=0.0051;AVGPOST=0.9966;RSQ=0.7347;ERATE=0.0004;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25271758 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0151;AVGPOST=0.9996;RSQ=0.9906;ERATE=0.0003;THETA=0.0007;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 25271985 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7435;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25272006 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4881;ERATE=0.0004;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25272014 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25272231 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25272258 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0033;AVGPOST=0.9984;RSQ=0.8187;ERATE=0.0006;THETA=0.0045;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25272289 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25272362 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0024;AVGPOST=0.9975;RSQ=0.6081;ERATE=0.0004;THETA=0.0036;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25272392 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0109;AVGPOST=0.9986;RSQ=0.9502;ERATE=0.0003;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 25272428 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0072;AVGPOST=0.9984;RSQ=0.9163;ERATE=0.0005;THETA=0.0017;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 25272429 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6236;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25272444 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0004;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25272535 . AGAAT A 180 PASS INDEL;BAVGPOST=0.992;BRSQ=0.562;LDAF=0.0218;AVGPOST=0.9720;RSQ=0.4946;ERATE=0.0034;THETA=0.0038;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 25272809 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.960;LDAF=0.0771;AVGPOST=0.9922;RSQ=0.9600;ERATE=0.0009;THETA=0.0003;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 25273017 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0085;AVGPOST=0.9978;RSQ=0.8899;ERATE=0.0004;THETA=0.0009;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 25273023 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.963;LDAF=0.0359;AVGPOST=0.9929;RSQ=0.9256;ERATE=0.0005;THETA=0.0036;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 25273053 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.620;LDAF=0.0028;AVGPOST=0.9968;RSQ=0.5965;ERATE=0.0005;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25273200 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.976;LDAF=0.4846;AVGPOST=0.9814;RSQ=0.9703;ERATE=0.0009;THETA=0.0005;AC=1056;AN=2184 GT:DS:GL:BD 0.48351648 0
1 25273288 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.977;LDAF=0.7021;AVGPOST=0.9842;RSQ=0.9739;ERATE=0.0023;THETA=0.0006;AC=1534;AN=2184 GT:DS:GL:BD 0.70238096 1
1 25273337 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0069;AVGPOST=0.9994;RSQ=0.9651;ERATE=0.0004;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 25273702 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6491;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25273774 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0042;AVGPOST=0.9984;RSQ=0.8514;ERATE=0.0004;THETA=0.0013;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25273822 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0138;AVGPOST=0.9995;RSQ=0.9834;ERATE=0.0003;THETA=0.0017;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 25274076 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0052;AVGPOST=0.9995;RSQ=0.9495;ERATE=0.0003;THETA=0.0021;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25274149 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0088;AVGPOST=0.9997;RSQ=0.9865;ERATE=0.0003;THETA=0.0012;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 25274154 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.819;LDAF=0.0033;AVGPOST=0.9981;RSQ=0.7987;ERATE=0.0003;THETA=0.0018;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25274287 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.651;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7129;ERATE=0.0004;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25274354 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5313;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25274483 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.600;LDAF=0.0018;AVGPOST=0.9985;RSQ=0.6423;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25274777 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0054;AVGPOST=0.9988;RSQ=0.9064;ERATE=0.0004;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25274801 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0029;AVGPOST=0.9988;RSQ=0.8547;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25274811 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0072;AVGPOST=0.9986;RSQ=0.9242;ERATE=0.0007;THETA=0.0010;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 25274823 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0047;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25274836 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.759;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25274887 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.536;LDAF=0.0059;AVGPOST=0.9946;RSQ=0.6403;ERATE=0.0012;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25274998 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.972;LDAF=0.1177;AVGPOST=0.9931;RSQ=0.9728;ERATE=0.0008;THETA=0.0007;AC=254;AN=2184 GT:DS:GL:BD 0.11630037 0
1 25275050 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6171;ERATE=0.0004;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25275165 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.906;LDAF=0.0064;AVGPOST=0.9975;RSQ=0.8286;ERATE=0.0008;THETA=0.0019;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 25275192 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.748;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5826;ERATE=0.0005;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25275372 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8448;ERATE=0.0003;THETA=0.0126;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25275440 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.8094;ERATE=0.0008;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25275617 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0020;AVGPOST=0.9984;RSQ=0.7005;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25275619 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0022;AVGPOST=0.9989;RSQ=0.7776;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25275721 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8219;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25275855 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9486;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25275859 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.979;LDAF=0.2393;AVGPOST=0.9874;RSQ=0.9752;ERATE=0.0008;THETA=0.0002;AC=520;AN=2184 GT:DS:GL:BD 0.23809524 0
1 25275864 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0362;AVGPOST=0.9973;RSQ=0.9738;ERATE=0.0003;THETA=0.0016;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 25275867 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.673;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7370;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25275899 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0084;AVGPOST=0.9997;RSQ=0.9816;ERATE=0.0004;THETA=0.0009;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 25275958 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8928;ERATE=0.0004;THETA=0.0038;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25276059 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0035;AVGPOST=0.9984;RSQ=0.8143;ERATE=0.0003;THETA=0.0020;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25276208 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0004;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25276284 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.527;LDAF=0.0042;AVGPOST=0.9948;RSQ=0.4740;ERATE=0.0010;THETA=0.0080;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25276339 . CAG C 180 PASS INDEL;BAVGPOST=1.000;BRSQ=0.745;LDAF=0.0020;AVGPOST=0.9972;RSQ=0.4432;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25276380 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4490;ERATE=0.0006;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25276521 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.924;LDAF=0.0173;AVGPOST=0.9958;RSQ=0.9044;ERATE=0.0004;THETA=0.0020;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 25276522 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.925;LDAF=0.0170;AVGPOST=0.9962;RSQ=0.9081;ERATE=0.0003;THETA=0.0034;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 25276537 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.1182;AVGPOST=0.9953;RSQ=0.9827;ERATE=0.0003;THETA=0.0005;AC=259;AN=2184 GT:DS:GL:BD 0.11858974 0
1 25276690 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0009;AVGPOST=0.9988;RSQ=0.4362;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25276698 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0045;AVGPOST=0.9984;RSQ=0.8425;ERATE=0.0004;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25276791 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.703;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7683;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25276924 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25277027 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.788;LDAF=0.0021;AVGPOST=0.9982;RSQ=0.6564;ERATE=0.0008;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25277049 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25277068 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.547;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7457;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25277140 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0083;AVGPOST=0.9987;RSQ=0.9322;ERATE=0.0005;THETA=0.0008;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 25277273 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8005;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25277421 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0047;AVGPOST=0.9987;RSQ=0.8822;ERATE=0.0004;THETA=0.0011;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25277437 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0119;AVGPOST=0.9982;RSQ=0.9342;ERATE=0.0005;THETA=0.0008;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 25277439 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.589;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.5358;ERATE=0.0004;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25277481 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5492;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25277554 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0034;AVGPOST=0.9969;RSQ=0.6164;ERATE=0.0012;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25277757 . CTT C 1710 PASS INDEL;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0069;AVGPOST=0.9989;RSQ=0.9402;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 25277801 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.656;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25277889 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0039;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25277976 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5489;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25277982 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.5240;AVGPOST=0.9958;RSQ=0.9942;ERATE=0.0004;THETA=0.0004;AC=1143;AN=2184 GT:DS:GL:BD 0.52335167 1
1 25278003 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8735;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25278160 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4683;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25278198 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0051;AVGPOST=0.9989;RSQ=0.9213;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25278207 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=0.9989;RSQ=0.8967;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25278211 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0005;AVGPOST=0.9993;RSQ=0.4039;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25278223 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0024;AVGPOST=0.9994;RSQ=0.8828;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25278248 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7545;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25278344 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0076;AVGPOST=0.9992;RSQ=0.9594;ERATE=0.0003;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 25278451 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.7495;AVGPOST=0.9964;RSQ=0.9927;ERATE=0.0005;THETA=0.0004;AC=1638;AN=2184 GT:DS:GL:BD 0.75000000 1
1 25278646 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25278655 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25278715 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.840;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8854;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25278756 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.873;LDAF=0.0037;AVGPOST=0.9995;RSQ=0.9355;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25278817 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.732;LDAF=0.0014;AVGPOST=0.9996;RSQ=0.8803;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25279116 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.5123;AVGPOST=0.9959;RSQ=0.9941;ERATE=0.0012;THETA=0.0005;AC=1117;AN=2184 GT:DS:GL:BD 0.51144689 1
1 25279124 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0385;AVGPOST=0.9992;RSQ=0.9909;ERATE=0.0004;THETA=0.0003;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 25279180 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.5764;AVGPOST=0.9984;RSQ=0.9975;ERATE=0.0003;THETA=0.0005;AC=1259;AN=2184 GT:DS:GL:BD 0.57646519 1
1 25279210 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0041;AVGPOST=0.9973;RSQ=0.7435;ERATE=0.0013;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25279220 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9485;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25279455 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.714;LDAF=0.0019;AVGPOST=0.9986;RSQ=0.6583;ERATE=0.0006;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25279508 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0018;AVGPOST=0.9977;RSQ=0.5797;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25279639 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.919;LDAF=0.1227;AVGPOST=0.9959;RSQ=0.9841;ERATE=0.0008;THETA=0.0007;AC=266;AN=2184 GT:DS:GL:BD 0.12179487 0
1 25279715 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0037;AVGPOST=0.9961;RSQ=0.5354;ERATE=0.0008;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25279989 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0548;AVGPOST=0.9990;RSQ=0.9936;ERATE=0.0003;THETA=0.0003;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 25279991 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0004;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25280128 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.695;LDAF=0.0015;AVGPOST=0.9982;RSQ=0.5531;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25280143 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0034;AVGPOST=0.9987;RSQ=0.8355;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25280311 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.671;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25280346 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25280409 . G GT 834 PASS INDEL;BAVGPOST=0.929;BRSQ=0.548;LDAF=0.1253;AVGPOST=0.8769;RSQ=0.5110;ERATE=0.0483;THETA=0.0004;AC=172;AN=2184 GT:DS:GL:BD 0.07875458 0
1 25280699 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0110;AVGPOST=0.9993;RSQ=0.9692;ERATE=0.0006;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 25280791 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25280848 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0063;AVGPOST=0.9994;RSQ=0.9542;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 25280896 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0041;AVGPOST=0.9990;RSQ=0.8928;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25280908 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1203;AVGPOST=0.9989;RSQ=0.9957;ERATE=0.0004;THETA=0.0004;AC=262;AN=2184 GT:DS:GL:BD 0.11996337 0
1 25281015 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1203;AVGPOST=0.9987;RSQ=0.9950;ERATE=0.0004;THETA=0.0007;AC=262;AN=2184 GT:DS:GL:BD 0.11996337 0
1 25281043 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.5788;AVGPOST=0.9957;RSQ=0.9938;ERATE=0.0005;THETA=0.0007;AC=1263;AN=2184 GT:DS:GL:BD 0.57829672 1
1 25281106 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8165;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25281254 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6237;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25281345 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9191;ERATE=0.0003;THETA=0.0042;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25281539 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0105;AVGPOST=0.9992;RSQ=0.9732;ERATE=0.0003;THETA=0.0010;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 25281567 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9895;ERATE=0.0003;THETA=0.0013;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25281734 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5856;ERATE=0.0004;THETA=0.0040;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25281738 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8832;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25281824 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7457;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25282286 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.758;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25282383 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9992;RSQ=0.9345;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25282451 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8893;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25282470 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9496;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25282526 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.696;LDAF=0.0017;AVGPOST=0.9981;RSQ=0.5320;ERATE=0.0006;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25282539 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0085;AVGPOST=0.9983;RSQ=0.9176;ERATE=0.0004;THETA=0.0007;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 25282650 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.932;LDAF=0.0046;AVGPOST=0.9987;RSQ=0.8789;ERATE=0.0004;THETA=0.0010;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25282710 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8538;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25282856 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.7358;AVGPOST=0.9987;RSQ=0.9973;ERATE=0.0004;THETA=0.0004;AC=1609;AN=2184 GT:DS:GL:BD 0.73672163 1
1 25282883 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.9151;ERATE=0.0003;THETA=0.0015;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25282926 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.781;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5104;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25282961 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7358;AVGPOST=0.9981;RSQ=0.9963;ERATE=0.0005;THETA=0.0003;AC=1609;AN=2184 GT:DS:GL:BD 0.73672163 1
1 25282993 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7352;AVGPOST=0.9968;RSQ=0.9947;ERATE=0.0003;THETA=0.0005;AC=1609;AN=2184 GT:DS:GL:BD 0.73672163 1
1 25283006 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9221;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25283058 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.8945;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25283069 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7360;AVGPOST=0.9986;RSQ=0.9970;ERATE=0.0005;THETA=0.0005;AC=1609;AN=2184 GT:DS:GL:BD 0.73672163 1
1 25283126 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7358;AVGPOST=0.9984;RSQ=0.9966;ERATE=0.0005;THETA=0.0032;AC=1608;AN=2184 GT:DS:GL:BD 0.73626375 1
1 25283162 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7359;AVGPOST=0.9977;RSQ=0.9950;ERATE=0.0008;THETA=0.0027;AC=1609;AN=2184 GT:DS:GL:BD 0.73672163 1
1 25283249 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.809;LDAF=0.0025;AVGPOST=0.9984;RSQ=0.7828;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25283270 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25283274 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7375;AVGPOST=0.9978;RSQ=0.9955;ERATE=0.0006;THETA=0.0033;AC=1612;AN=2184 GT:DS:GL:BD 0.73809522 1
1 25283356 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.7052;AVGPOST=0.9966;RSQ=0.9943;ERATE=0.0007;THETA=0.0010;AC=1541;AN=2184 GT:DS:GL:BD 0.70558608 1
1 25283366 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.742;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25283432 . TG T 557 PASS INDEL;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0057;AVGPOST=0.9959;RSQ=0.7362;ERATE=0.0007;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25283572 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0171;AVGPOST=0.9985;RSQ=0.9651;ERATE=0.0006;THETA=0.0004;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 25283591 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0081;AVGPOST=0.9995;RSQ=0.9803;ERATE=0.0003;THETA=0.0010;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 25283592 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.7369;AVGPOST=0.9980;RSQ=0.9962;ERATE=0.0004;THETA=0.0005;AC=1610;AN=2184 GT:DS:GL:BD 0.73717946 1
1 25283714 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25283808 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0485;AVGPOST=0.9985;RSQ=0.9879;ERATE=0.0004;THETA=0.0013;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 25284087 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0028;AVGPOST=0.9993;RSQ=0.8871;ERATE=0.0003;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25284199 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0019;AVGPOST=0.9993;RSQ=0.8423;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25284221 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25284408 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6880;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25284411 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9370;ERATE=0.0003;THETA=0.0030;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25284512 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.657;LDAF=0.0258;AVGPOST=0.9791;RSQ=0.6694;ERATE=0.0117;THETA=0.0007;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 25284666 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.985;LDAF=0.7380;AVGPOST=0.9936;RSQ=0.9882;ERATE=0.0004;THETA=0.0021;AC=1613;AN=2184 GT:DS:GL:BD 0.73855311 1
1 25284678 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.985;LDAF=0.7378;AVGPOST=0.9937;RSQ=0.9885;ERATE=0.0004;THETA=0.0050;AC=1613;AN=2184 GT:DS:GL:BD 0.73855311 1
1 25284701 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0081;AVGPOST=0.9993;RSQ=0.9628;ERATE=0.0004;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 25284706 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6646;ERATE=0.0003;THETA=0.0058;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25284784 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6439;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25284919 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8100;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25285054 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6693;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25285094 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0032;AVGPOST=0.9998;RSQ=0.9668;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25285122 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0049;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25285248 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.973;LDAF=0.0384;AVGPOST=0.9973;RSQ=0.9718;ERATE=0.0003;THETA=0.0009;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 25285326 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0067;AVGPOST=0.9994;RSQ=0.9639;ERATE=0.0004;THETA=0.0032;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 25285766 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.846;LDAF=0.0099;AVGPOST=0.9908;RSQ=0.6704;ERATE=0.0007;THETA=0.0009;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 25285828 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.813;LDAF=0.0201;AVGPOST=0.9904;RSQ=0.8130;ERATE=0.0005;THETA=0.0024;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 25285959 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.632;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.6964;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25286151 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.6569;AVGPOST=0.9890;RSQ=0.9824;ERATE=0.0006;THETA=0.0034;AC=1438;AN=2184 GT:DS:GL:BD 0.65842491 1
1 25286291 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0152;AVGPOST=0.9989;RSQ=0.9712;ERATE=0.0003;THETA=0.0017;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 25286361 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6343;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25286420 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0035;AVGPOST=0.9986;RSQ=0.8284;ERATE=0.0004;THETA=0.0047;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25286477 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.761;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7327;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25286540 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8096;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25286599 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0029;AVGPOST=0.9986;RSQ=0.7807;ERATE=0.0007;THETA=0.0069;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25286729 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0018;AVGPOST=0.9987;RSQ=0.6925;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25286739 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0769;AVGPOST=0.9975;RSQ=0.9892;ERATE=0.0004;THETA=0.0013;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 25286785 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25287027 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.761;LDAF=0.0022;AVGPOST=0.9975;RSQ=0.5773;ERATE=0.0004;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25287161 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.987;LDAF=0.0668;AVGPOST=0.9968;RSQ=0.9841;ERATE=0.0004;THETA=0.0006;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 25287232 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0233;AVGPOST=0.9990;RSQ=0.9839;ERATE=0.0004;THETA=0.0004;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 25287461 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25287480 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25287569 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6054;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25287696 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6112;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25287722 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.845;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8096;ERATE=0.0004;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25287801 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.880;LDAF=0.0047;AVGPOST=0.9980;RSQ=0.8258;ERATE=0.0006;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25287954 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25288027 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5785;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25288077 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0045;AVGPOST=0.9973;RSQ=0.7324;ERATE=0.0008;THETA=0.0032;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25288174 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9740;ERATE=0.0004;THETA=0.0037;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 25288181 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0043;AVGPOST=0.9985;RSQ=0.8359;ERATE=0.0011;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25288182 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0020;AVGPOST=0.9982;RSQ=0.6140;ERATE=0.0006;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25288313 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.1209;AVGPOST=0.9963;RSQ=0.9865;ERATE=0.0005;THETA=0.0034;AC=265;AN=2184 GT:DS:GL:BD 0.12133700 0
1 25288426 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0229;AVGPOST=0.9993;RSQ=0.9863;ERATE=0.0004;THETA=0.0006;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 25288470 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.5731;ERATE=0.0006;THETA=0.0036;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25288471 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0495;AVGPOST=0.9984;RSQ=0.9876;ERATE=0.0004;THETA=0.0037;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 25288485 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0230;AVGPOST=0.9996;RSQ=0.9916;ERATE=0.0003;THETA=0.0002;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 25288521 . CT C 23 PASS INDEL;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5838;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25288660 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6442;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25288739 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7063;ERATE=0.0003;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25288832 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1024;AVGPOST=0.9984;RSQ=0.9937;ERATE=0.0004;THETA=0.0011;AC=224;AN=2184 GT:DS:GL:BD 0.10256410 0
1 25288871 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0106;AVGPOST=0.9974;RSQ=0.9067;ERATE=0.0004;THETA=0.0031;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 25288884 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.742;LDAF=0.0070;AVGPOST=0.9963;RSQ=0.7728;ERATE=0.0010;THETA=0.0060;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 25288935 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.626;LDAF=0.0024;AVGPOST=0.9970;RSQ=0.5147;ERATE=0.0006;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25289108 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.760;LDAF=0.0032;AVGPOST=0.9979;RSQ=0.7054;ERATE=0.0006;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25289197 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0402;AVGPOST=0.9995;RSQ=0.9942;ERATE=0.0004;THETA=0.0003;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 25289275 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1260;AVGPOST=0.9985;RSQ=0.9945;ERATE=0.0006;THETA=0.0023;AC=276;AN=2184 GT:DS:GL:BD 0.12637363 0
1 25289427 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.1018;AVGPOST=0.9989;RSQ=0.9952;ERATE=0.0005;THETA=0.0003;AC=222;AN=2184 GT:DS:GL:BD 0.10164835 0
1 25289485 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25289576 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0038;AVGPOST=0.9976;RSQ=0.7372;ERATE=0.0005;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25289591 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4891;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25289612 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1434;AVGPOST=0.9990;RSQ=0.9967;ERATE=0.0004;THETA=0.0005;AC=313;AN=2184 GT:DS:GL:BD 0.14331502 0
1 25289622 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.710;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5108;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25289734 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.981;LDAF=0.5209;AVGPOST=0.9867;RSQ=0.9804;ERATE=0.0009;THETA=0.0015;AC=1140;AN=2184 GT:DS:GL:BD 0.52197802 1
1 25289772 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0400;AVGPOST=0.9995;RSQ=0.9942;ERATE=0.0004;THETA=0.0005;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 25289794 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1416;AVGPOST=0.9986;RSQ=0.9953;ERATE=0.0004;THETA=0.0008;AC=309;AN=2184 GT:DS:GL:BD 0.14148352 0
1 25289828 . G GCAGGC 63 PASS INDEL;BAVGPOST=0.999;BRSQ=0.434;LDAF=0.0022;AVGPOST=0.9964;RSQ=0.3215;ERATE=0.0006;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25289840 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.795;LDAF=0.0068;AVGPOST=0.9951;RSQ=0.6926;ERATE=0.0004;THETA=0.0019;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25289906 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9978;RSQ=0.7980;ERATE=0.0005;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25289996 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.762;LDAF=0.0027;AVGPOST=0.9981;RSQ=0.7402;ERATE=0.0013;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25290231 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.746;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5492;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25290375 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.880;LDAF=0.0065;AVGPOST=0.9980;RSQ=0.8798;ERATE=0.0004;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 25290390 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6178;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25290398 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6211;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25290418 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7355;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25290446 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1431;AVGPOST=0.9991;RSQ=0.9969;ERATE=0.0005;THETA=0.0008;AC=313;AN=2184 GT:DS:GL:BD 0.14331502 0
1 25290546 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0232;AVGPOST=0.9992;RSQ=0.9835;ERATE=0.0004;THETA=0.0007;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 25290634 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.609;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.6377;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25290676 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.733;LDAF=0.0035;AVGPOST=0.9984;RSQ=0.8025;ERATE=0.0004;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25290698 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0127;AVGPOST=0.9962;RSQ=0.8772;ERATE=0.0005;THETA=0.0035;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 25290763 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7042;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25290764 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0041;AVGPOST=0.9993;RSQ=0.9360;ERATE=0.0003;THETA=0.0011;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25290800 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0040;AVGPOST=0.9992;RSQ=0.9302;ERATE=0.0004;THETA=0.0043;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25290832 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0490;AVGPOST=0.9997;RSQ=0.9976;ERATE=0.0003;THETA=0.0005;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 25290913 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9863;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25291005 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0003;THETA=0.0040;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25291006 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0055;AVGPOST=1.0000;RSQ=0.9960;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 25291010 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.988;LDAF=0.5439;AVGPOST=0.9938;RSQ=0.9900;ERATE=0.0072;THETA=0.0006;AC=1187;AN=2184 GT:DS:GL:BD 0.54349816 1
1 25291021 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25291055 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25291068 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0008;AVGPOST=0.9998;RSQ=0.8876;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25291136 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8540;ERATE=0.0003;THETA=0.0039;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25291140 . A AT 163 PASS INDEL;BAVGPOST=0.980;BRSQ=0.494;LDAF=0.0444;AVGPOST=0.9419;RSQ=0.4485;ERATE=0.0076;THETA=0.0009;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 25291219 . CT C 302 PASS INDEL;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0061;AVGPOST=0.9985;RSQ=0.8864;ERATE=0.0005;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 25291280 . TGA T 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.648;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5361;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25291412 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.726;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6980;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25291448 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0335;AVGPOST=0.9987;RSQ=0.9840;ERATE=0.0005;THETA=0.0007;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 25291487 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0406;AVGPOST=0.9977;RSQ=0.9830;ERATE=0.0004;THETA=0.0011;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 25291540 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.777;LDAF=0.0017;AVGPOST=0.9969;RSQ=0.2126;ERATE=0.0007;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25291683 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8639;ERATE=0.0004;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25291697 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.624;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6033;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25291720 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.696;LDAF=0.0039;AVGPOST=0.9949;RSQ=0.4374;ERATE=0.0016;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25291803 . GAA G 158 PASS INDEL;BAVGPOST=0.981;BRSQ=0.551;LDAF=0.0282;AVGPOST=0.9716;RSQ=0.6214;ERATE=0.0013;THETA=0.0009;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 25291866 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0029;AVGPOST=0.9973;RSQ=0.6393;ERATE=0.0004;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25291967 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.480;LDAF=0.0034;AVGPOST=0.9962;RSQ=0.5503;ERATE=0.0006;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25291989 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7140;ERATE=0.0005;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25291990 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0817;AVGPOST=0.9983;RSQ=0.9917;ERATE=0.0004;THETA=0.0025;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 25292073 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.747;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7199;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25292238 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.645;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.5938;ERATE=0.0007;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25292258 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0031;AVGPOST=0.9981;RSQ=0.7274;ERATE=0.0005;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25292274 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.614;LDAF=0.0042;AVGPOST=0.9944;RSQ=0.5009;ERATE=0.0007;THETA=0.0021;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25292285 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0033;AVGPOST=0.9992;RSQ=0.8927;ERATE=0.0005;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25292316 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.805;LDAF=0.0249;AVGPOST=0.9916;RSQ=0.8552;ERATE=0.0004;THETA=0.0009;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 25292417 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.851;LDAF=0.0090;AVGPOST=0.9957;RSQ=0.8260;ERATE=0.0004;THETA=0.0011;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 25292484 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7144;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25292518 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6586;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25292536 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0024;AVGPOST=0.9995;RSQ=0.9122;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25292584 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.3640;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25292598 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1255;AVGPOST=0.9976;RSQ=0.9946;ERATE=0.0004;THETA=0.0012;AC=276;AN=2184 GT:DS:GL:BD 0.12637363 0
1 25292668 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5326;AVGPOST=0.9969;RSQ=0.9954;ERATE=0.0004;THETA=0.0026;AC=1164;AN=2184 GT:DS:GL:BD 0.53296703 1
1 25292669 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9799;ERATE=0.0004;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25292735 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5172;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25292843 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0036;AVGPOST=0.9993;RSQ=0.9032;ERATE=0.0005;THETA=0.0011;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25292855 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0123;AVGPOST=0.9975;RSQ=0.9200;ERATE=0.0004;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 25292955 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8067;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25293084 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5347;AVGPOST=0.9977;RSQ=0.9963;ERATE=0.0005;THETA=0.0004;AC=1169;AN=2184 GT:DS:GL:BD 0.53525639 1
1 25293128 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0005;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25293201 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.985;LDAF=0.5349;AVGPOST=0.9964;RSQ=0.9943;ERATE=0.0005;THETA=0.0005;AC=1171;AN=2184 GT:DS:GL:BD 0.53617215 1
1 25293216 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.986;LDAF=0.5346;AVGPOST=0.9971;RSQ=0.9948;ERATE=0.0006;THETA=0.0004;AC=1171;AN=2184 GT:DS:GL:BD 0.53617215 1
1 25293224 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7702;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25293237 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.991;LDAF=0.5354;AVGPOST=0.9980;RSQ=0.9966;ERATE=0.0007;THETA=0.0005;AC=1171;AN=2184 GT:DS:GL:BD 0.53617215 1
1 25293276 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5672;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25293294 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25293356 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5346;AVGPOST=0.9967;RSQ=0.9953;ERATE=0.0005;THETA=0.0006;AC=1167;AN=2184 GT:DS:GL:BD 0.53434068 1
1 25293485 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9321;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25293530 . CT C 6 PASS INDEL;BAVGPOST=0.999;BRSQ=0.724;LDAF=0.0019;AVGPOST=0.9975;RSQ=0.4492;ERATE=0.0006;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25293585 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8400;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25293682 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.878;LDAF=0.0182;AVGPOST=0.9949;RSQ=0.8992;ERATE=0.0005;THETA=0.0005;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 25293829 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5369;AVGPOST=0.9933;RSQ=0.9895;ERATE=0.0011;THETA=0.0011;AC=1169;AN=2184 GT:DS:GL:BD 0.53525639 1
1 25293879 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.827;LDAF=0.0055;AVGPOST=0.9967;RSQ=0.7510;ERATE=0.0009;THETA=0.0021;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25293902 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5387;AVGPOST=0.9974;RSQ=0.9959;ERATE=0.0005;THETA=0.0008;AC=1178;AN=2184 GT:DS:GL:BD 0.53937727 1
1 25293941 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5753;AVGPOST=0.9979;RSQ=0.9964;ERATE=0.0004;THETA=0.0009;AC=1258;AN=2184 GT:DS:GL:BD 0.57600731 1
1 25294195 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.983;LDAF=0.5339;AVGPOST=0.9961;RSQ=0.9937;ERATE=0.0008;THETA=0.0003;AC=1170;AN=2184 GT:DS:GL:BD 0.53571427 1
1 25294206 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.981;LDAF=0.5263;AVGPOST=0.9907;RSQ=0.9866;ERATE=0.0014;THETA=0.0002;AC=1156;AN=2184 GT:DS:GL:BD 0.52930403 1
1 25294208 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.981;LDAF=0.5328;AVGPOST=0.9943;RSQ=0.9914;ERATE=0.0004;THETA=0.0005;AC=1170;AN=2184 GT:DS:GL:BD 0.53571427 1
1 25294264 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5325;AVGPOST=0.9974;RSQ=0.9961;ERATE=0.0006;THETA=0.0045;AC=1163;AN=2184 GT:DS:GL:BD 0.53250915 1
1 25294306 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6420;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25294308 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.748;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7756;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25294345 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.5345;AVGPOST=0.9957;RSQ=0.9938;ERATE=0.0007;THETA=0.0022;AC=1170;AN=2184 GT:DS:GL:BD 0.53571427 1
1 25294378 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5492;ERATE=0.0004;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25294386 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5706;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25294458 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9223;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25294573 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.921;BRSQ=0.856;LDAF=0.4652;AVGPOST=0.9086;RSQ=0.8635;ERATE=0.0135;THETA=0.0010;AC=1059;AN=2184 GT:DS:GL:BD 0.48489010 0
1 25294607 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.963;LDAF=0.5208;AVGPOST=0.9816;RSQ=0.9739;ERATE=0.0012;THETA=0.0005;AC=1145;AN=2184 GT:DS:GL:BD 0.52426738 1
1 25294610 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.673;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6027;ERATE=0.0006;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25294618 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.964;LDAF=0.5229;AVGPOST=0.9831;RSQ=0.9769;ERATE=0.0004;THETA=0.0033;AC=1151;AN=2184 GT:DS:GL:BD 0.52701467 1
1 25294652 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.916;LDAF=0.0032;AVGPOST=0.9993;RSQ=0.8965;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25294705 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0487;AVGPOST=0.9995;RSQ=0.9960;ERATE=0.0004;THETA=0.0005;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 25294706 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.791;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.5530;ERATE=0.0008;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25294722 . A AT 55 PASS INDEL;BAVGPOST=0.993;BRSQ=0.443;LDAF=0.0176;AVGPOST=0.9739;RSQ=0.4029;ERATE=0.0058;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 25294874 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.922;LDAF=0.0178;AVGPOST=0.9957;RSQ=0.9101;ERATE=0.0004;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 25294878 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5367;AVGPOST=0.9978;RSQ=0.9968;ERATE=0.0004;THETA=0.0009;AC=1171;AN=2184 GT:DS:GL:BD 0.53617215 1
1 25294902 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5430;AVGPOST=0.9980;RSQ=0.9969;ERATE=0.0004;THETA=0.0007;AC=1186;AN=2184 GT:DS:GL:BD 0.54304028 1
1 25295005 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6362;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25295044 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.640;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6683;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25295165 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25295286 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0205;AVGPOST=0.9990;RSQ=0.9805;ERATE=0.0004;THETA=0.0015;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 25295400 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0797;AVGPOST=0.9990;RSQ=0.9950;ERATE=0.0004;THETA=0.0006;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 25295402 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0794;AVGPOST=0.9997;RSQ=0.9986;ERATE=0.0003;THETA=0.0003;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 25295445 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8824;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25295483 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0794;AVGPOST=0.9987;RSQ=0.9944;ERATE=0.0004;THETA=0.0005;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 25295580 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5729;AVGPOST=0.9985;RSQ=0.9972;ERATE=0.0005;THETA=0.0011;AC=1251;AN=2184 GT:DS:GL:BD 0.57280219 1
1 25295704 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0514;AVGPOST=0.9995;RSQ=0.9964;ERATE=0.0003;THETA=0.0003;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 25295834 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6607;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25295835 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9204;ERATE=0.0004;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25295887 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8523;ERATE=0.0010;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25295893 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0176;AVGPOST=0.9996;RSQ=0.9906;ERATE=0.0004;THETA=0.0010;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 25295905 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0154;AVGPOST=0.9995;RSQ=0.9904;ERATE=0.0004;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 25295932 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0005;AVGPOST=0.9994;RSQ=0.5495;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25295935 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0176;AVGPOST=0.9996;RSQ=0.9905;ERATE=0.0003;THETA=0.0014;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 25295984 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0037;AVGPOST=0.9992;RSQ=0.9140;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25296009 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0163;AVGPOST=0.9991;RSQ=0.9789;ERATE=0.0003;THETA=0.0006;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 25296109 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0157;AVGPOST=0.9984;RSQ=0.9582;ERATE=0.0005;THETA=0.0008;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 25296112 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6426;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25296156 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.0572;AVGPOST=0.9960;RSQ=0.9730;ERATE=0.0010;THETA=0.0003;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 25296332 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.711;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.5756;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25296368 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.0587;AVGPOST=0.9984;RSQ=0.9910;ERATE=0.0004;THETA=0.0005;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 25296403 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0472;AVGPOST=0.9984;RSQ=0.9861;ERATE=0.0006;THETA=0.0004;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 25296447 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.800;LDAF=0.0036;AVGPOST=0.9973;RSQ=0.6742;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25296478 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6445;AVGPOST=0.9984;RSQ=0.9966;ERATE=0.0008;THETA=0.0004;AC=1408;AN=2184 GT:DS:GL:BD 0.64468867 1
1 25296479 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.978;LDAF=0.0398;AVGPOST=0.9986;RSQ=0.9866;ERATE=0.0004;THETA=0.0006;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 25296501 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0042;AVGPOST=0.9975;RSQ=0.7701;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25296509 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0185;AVGPOST=0.9993;RSQ=0.9828;ERATE=0.0004;THETA=0.0005;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 25296560 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.1746;AVGPOST=0.9922;RSQ=0.9825;ERATE=0.0011;THETA=0.0007;AC=378;AN=2184 GT:DS:GL:BD 0.17307693 0
1 25296577 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0398;AVGPOST=0.9994;RSQ=0.9935;ERATE=0.0004;THETA=0.0018;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 25296743 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6618;AVGPOST=0.9989;RSQ=0.9978;ERATE=0.0004;THETA=0.0003;AC=1446;AN=2184 GT:DS:GL:BD 0.66208792 1
1 25296788 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0112;AVGPOST=0.9993;RSQ=0.9802;ERATE=0.0003;THETA=0.0006;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 25296801 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0567;AVGPOST=0.9999;RSQ=0.9990;ERATE=0.0003;THETA=0.0005;AC=124;AN=2184 GT:DS:GL:BD 0.05677656 0
1 25296803 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25296885 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0032;AVGPOST=0.9976;RSQ=0.6813;ERATE=0.0007;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25296974 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25297019 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25297039 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7280;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25297072 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25297108 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0020;AVGPOST=0.9992;RSQ=0.8252;ERATE=0.0004;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25297120 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9197;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25297137 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.644;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4206;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25297138 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.498;LDAF=0.0308;AVGPOST=0.9654;RSQ=0.5495;ERATE=0.0097;THETA=0.0004;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 25297184 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.4740;AVGPOST=0.9925;RSQ=0.9882;ERATE=0.0009;THETA=0.0004;AC=1035;AN=2184 GT:DS:GL:BD 0.47390109 0
1 25297217 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.1409;AVGPOST=0.9952;RSQ=0.9854;ERATE=0.0021;THETA=0.0007;AC=304;AN=2184 GT:DS:GL:BD 0.13919415 0
1 25297232 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6737;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25297283 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1390;AVGPOST=0.9994;RSQ=0.9979;ERATE=0.0003;THETA=0.0006;AC=304;AN=2184 GT:DS:GL:BD 0.13919415 0
1 25297307 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25297318 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.903;LDAF=0.0055;AVGPOST=0.9987;RSQ=0.9035;ERATE=0.0005;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25297367 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1388;AVGPOST=0.9994;RSQ=0.9978;ERATE=0.0003;THETA=0.0038;AC=304;AN=2184 GT:DS:GL:BD 0.13919415 0
1 25297382 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.870;LDAF=0.0030;AVGPOST=0.9985;RSQ=0.8377;ERATE=0.0012;THETA=0.0023;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25297461 rs71912523 GTC G 10041 PASS INDEL;BAVGPOST=0.982;BRSQ=0.920;LDAF=0.1245;AVGPOST=0.9821;RSQ=0.9441;ERATE=0.0012;THETA=0.0006;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 25297470 rs71886274 TGTGA T 9778 PASS INDEL;BAVGPOST=0.980;BRSQ=0.914;LDAF=0.1178;AVGPOST=0.9840;RSQ=0.9492;ERATE=0.0005;THETA=0.0006;AC=261;AN=2184 GT:DS:GL:BD 0.11950549 0
1 25297520 . GGTGT G 17122 PASS INDEL;BAVGPOST=0.980;BRSQ=0.916;LDAF=0.1290;AVGPOST=0.9730;RSQ=0.9114;ERATE=0.0014;THETA=0.0006;AC=259;AN=2184 GT:DS:GL:BD 0.11858974 0
1 25297523 . GTGTA G 34633 PASS INDEL;BAVGPOST=0.938;BRSQ=0.873;LDAF=0.4930;AVGPOST=0.9143;RSQ=0.8621;ERATE=0.0293;THETA=0.0005;AC=1101;AN=2184 GT:DS:GL:BD 0.50412089 1
1 25297527 rs35683249 ATGTG A 77357 PASS INDEL;BAVGPOST=0.948;BRSQ=0.910;LDAF=0.4942;AVGPOST=0.9455;RSQ=0.9244;ERATE=0.0088;THETA=0.0011;AC=1074;AN=2184 GT:DS:GL:BD 0.49175823 0
1 25297550 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0070;AVGPOST=0.9996;RSQ=0.9753;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 25297579 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0039;AVGPOST=0.9987;RSQ=0.8673;ERATE=0.0019;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25297587 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6029;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25297640 rs34905278 TGG T 22507 PASS INDEL;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1394;AVGPOST=0.9969;RSQ=0.9911;ERATE=0.0006;THETA=0.0005;AC=307;AN=2184 GT:DS:GL:BD 0.14056776 0
1 25297658 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1410;AVGPOST=0.9994;RSQ=0.9978;ERATE=0.0004;THETA=0.0009;AC=309;AN=2184 GT:DS:GL:BD 0.14148352 0
1 25297681 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.786;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.6794;ERATE=0.0006;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25297697 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1409;AVGPOST=0.9992;RSQ=0.9974;ERATE=0.0003;THETA=0.0009;AC=308;AN=2184 GT:DS:GL:BD 0.14102565 0
1 25297704 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1408;AVGPOST=0.9993;RSQ=0.9977;ERATE=0.0003;THETA=0.0008;AC=308;AN=2184 GT:DS:GL:BD 0.14102565 0
1 25298019 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0015;AVGPOST=0.9981;RSQ=0.5518;ERATE=0.0003;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25298146 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.798;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8083;ERATE=0.0005;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25298280 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1351;AVGPOST=0.9980;RSQ=0.9929;ERATE=0.0005;THETA=0.0006;AC=295;AN=2184 GT:DS:GL:BD 0.13507326 0
1 25298284 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.986;LDAF=0.1095;AVGPOST=0.9947;RSQ=0.9802;ERATE=0.0005;THETA=0.0008;AC=238;AN=2184 GT:DS:GL:BD 0.10897436 0
1 25298408 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.967;BRSQ=0.913;LDAF=0.1738;AVGPOST=0.9699;RSQ=0.9237;ERATE=0.0009;THETA=0.0029;AC=361;AN=2184 GT:DS:GL:BD 0.16529304 0
1 25298480 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0004;THETA=0.0027;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25298501 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25298512 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.794;LDAF=0.0024;AVGPOST=0.9995;RSQ=0.9099;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25298610 . CTAT C 105 PASS INDEL;BAVGPOST=0.993;BRSQ=0.658;LDAF=0.0176;AVGPOST=0.9787;RSQ=0.5059;ERATE=0.0066;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 25298770 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9133;ERATE=0.0004;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25298780 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.801;LDAF=0.0088;AVGPOST=0.9926;RSQ=0.6642;ERATE=0.0016;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 25298784 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.620;LDAF=0.0026;AVGPOST=0.9976;RSQ=0.6332;ERATE=0.0007;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25298785 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0036;AVGPOST=0.9989;RSQ=0.8780;ERATE=0.0004;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25298841 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.981;LDAF=0.1226;AVGPOST=0.9935;RSQ=0.9802;ERATE=0.0007;THETA=0.0011;AC=265;AN=2184 GT:DS:GL:BD 0.12133700 0
1 25298859 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8704;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25298906 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9430;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25299078 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0027;AVGPOST=0.9993;RSQ=0.8700;ERATE=0.0005;THETA=0.0020;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25299083 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0019;AVGPOST=0.9992;RSQ=0.8600;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25299190 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8801;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25299214 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25299232 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.776;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4978;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25299233 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9463;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25299245 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.893;LDAF=0.0117;AVGPOST=0.9935;RSQ=0.7948;ERATE=0.0005;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 25299404 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6180;AVGPOST=0.9974;RSQ=0.9952;ERATE=0.0005;THETA=0.0008;AC=1350;AN=2184 GT:DS:GL:BD 0.61813188 1
1 25299426 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1244;AVGPOST=0.9985;RSQ=0.9944;ERATE=0.0005;THETA=0.0006;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 25299432 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.6178;AVGPOST=0.9975;RSQ=0.9954;ERATE=0.0005;THETA=0.0006;AC=1350;AN=2184 GT:DS:GL:BD 0.61813188 1
1 25299473 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.954;LDAF=0.0254;AVGPOST=0.9940;RSQ=0.9111;ERATE=0.0005;THETA=0.0046;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 25299481 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.803;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8251;ERATE=0.0004;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25299602 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6177;AVGPOST=0.9976;RSQ=0.9957;ERATE=0.0004;THETA=0.0004;AC=1350;AN=2184 GT:DS:GL:BD 0.61813188 1
1 25299637 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6173;AVGPOST=0.9987;RSQ=0.9975;ERATE=0.0005;THETA=0.0019;AC=1349;AN=2184 GT:DS:GL:BD 0.61767399 1
1 25299668 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.570;LDAF=0.0193;AVGPOST=0.9804;RSQ=0.6174;ERATE=0.0044;THETA=0.0006;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 25299728 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0034;AVGPOST=0.9986;RSQ=0.8510;ERATE=0.0004;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25299744 . TCC T 18986 PASS INDEL;BAVGPOST=0.942;BRSQ=0.882;LDAF=0.5778;AVGPOST=0.9216;RSQ=0.8751;ERATE=0.0217;THETA=0.0007;AC=1287;AN=2184 GT:DS:GL:BD 0.58928573 1
1 25299748 rs60362111 CCA C 70298 PASS INDEL;BAVGPOST=0.986;BRSQ=0.970;LDAF=0.6218;AVGPOST=0.9909;RSQ=0.9844;ERATE=0.0009;THETA=0.0011;AC=1353;AN=2184 GT:DS:GL:BD 0.61950547 1
1 25299816 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6171;AVGPOST=0.9974;RSQ=0.9962;ERATE=0.0004;THETA=0.0002;AC=1349;AN=2184 GT:DS:GL:BD 0.61767399 1
1 25299836 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6177;AVGPOST=0.9984;RSQ=0.9970;ERATE=0.0005;THETA=0.0006;AC=1350;AN=2184 GT:DS:GL:BD 0.61813188 1
1 25299884 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0085;AVGPOST=0.9986;RSQ=0.9396;ERATE=0.0006;THETA=0.0028;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 25300042 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6181;AVGPOST=0.9980;RSQ=0.9962;ERATE=0.0006;THETA=0.0015;AC=1350;AN=2184 GT:DS:GL:BD 0.61813188 1
1 25300138 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0188;AVGPOST=0.9990;RSQ=0.9786;ERATE=0.0004;THETA=0.0033;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 25300256 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.6171;AVGPOST=0.9958;RSQ=0.9922;ERATE=0.0005;THETA=0.0008;AC=1350;AN=2184 GT:DS:GL:BD 0.61813188 1
1 25300369 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.950;BRSQ=0.904;LDAF=0.5978;AVGPOST=0.9614;RSQ=0.9369;ERATE=0.0025;THETA=0.0005;AC=1330;AN=2184 GT:DS:GL:BD 0.60897434 1
1 25300369 rs71667083 C CTT 10061 PASS INDEL;BAVGPOST=0.849;BRSQ=0.667;LDAF=0.6605;AVGPOST=0.8340;RSQ=0.6896;ERATE=0.0137;THETA=0.0003;AC=1413;AN=2184 GT:DS:GL:BD 0.64697802 1
1 25300430 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0072;AVGPOST=0.9985;RSQ=0.9215;ERATE=0.0004;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 25300436 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7598;AVGPOST=0.9953;RSQ=0.9907;ERATE=0.0006;THETA=0.0040;AC=1663;AN=2184 GT:DS:GL:BD 0.76144689 1
1 25300494 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.768;LDAF=0.0124;AVGPOST=0.9936;RSQ=0.8004;ERATE=0.0006;THETA=0.0007;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 25300504 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4718;ERATE=0.0005;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25300541 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6174;AVGPOST=0.9990;RSQ=0.9979;ERATE=0.0004;THETA=0.0005;AC=1350;AN=2184 GT:DS:GL:BD 0.61813188 1
1 25300632 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6175;AVGPOST=0.9995;RSQ=0.9990;ERATE=0.0003;THETA=0.0022;AC=1350;AN=2184 GT:DS:GL:BD 0.61813188 1
1 25300646 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5756;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25300669 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1243;AVGPOST=1.0000;RSQ=0.9998;ERATE=0.0003;THETA=0.0006;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 25300777 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9654;ERATE=0.0005;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25301034 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6925;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25301119 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25301159 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7357;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25301247 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0139;AVGPOST=0.9995;RSQ=0.9843;ERATE=0.0003;THETA=0.0017;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 25301268 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7955;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25301370 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7417;AVGPOST=0.9994;RSQ=0.9986;ERATE=0.0003;THETA=0.0003;AC=1622;AN=2184 GT:DS:GL:BD 0.74267399 1
1 25301477 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.6156;AVGPOST=0.9960;RSQ=0.9928;ERATE=0.0006;THETA=0.0005;AC=1348;AN=2184 GT:DS:GL:BD 0.61721611 1
1 25301653 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.6166;AVGPOST=0.9974;RSQ=0.9947;ERATE=0.0008;THETA=0.0009;AC=1350;AN=2184 GT:DS:GL:BD 0.61813188 1
1 25301798 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25301809 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6093;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25301819 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0004;AVGPOST=0.9995;RSQ=0.4621;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25301820 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0014;AVGPOST=0.9993;RSQ=0.7907;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25301869 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.6175;AVGPOST=0.9993;RSQ=0.9985;ERATE=0.0004;THETA=0.0009;AC=1350;AN=2184 GT:DS:GL:BD 0.61813188 1
1 25301913 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1243;AVGPOST=0.9994;RSQ=0.9978;ERATE=0.0003;THETA=0.0004;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 25301948 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7766;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25302014 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1243;AVGPOST=0.9997;RSQ=0.9990;ERATE=0.0003;THETA=0.0005;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 25302093 . A AT 205 PASS INDEL;BAVGPOST=0.999;BRSQ=0.816;LDAF=0.0029;AVGPOST=0.9970;RSQ=0.5737;ERATE=0.0006;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25302176 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0102;AVGPOST=0.9992;RSQ=0.9758;ERATE=0.0003;THETA=0.0007;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 25302183 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9679;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25302436 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.864;LDAF=0.0045;AVGPOST=0.9965;RSQ=0.6957;ERATE=0.0012;THETA=0.0013;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25302495 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.6159;AVGPOST=0.9958;RSQ=0.9920;ERATE=0.0008;THETA=0.0007;AC=1348;AN=2184 GT:DS:GL:BD 0.61721611 1
1 25302498 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0055;AVGPOST=0.9968;RSQ=0.7898;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25302585 . CA C 130 PASS INDEL;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0021;AVGPOST=0.9976;RSQ=0.4739;ERATE=0.0009;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25302619 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9481;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25302758 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7582;AVGPOST=0.9967;RSQ=0.9936;ERATE=0.0005;THETA=0.0008;AC=1659;AN=2184 GT:DS:GL:BD 0.75961536 1
1 25302818 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9376;ERATE=0.0004;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25302844 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.966;LDAF=0.0178;AVGPOST=0.9976;RSQ=0.9453;ERATE=0.0013;THETA=0.0024;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 25302888 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5445;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25302940 . G GGTA 110 PASS INDEL;BAVGPOST=1.000;BRSQ=0.777;LDAF=0.0018;AVGPOST=0.9974;RSQ=0.4885;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25302980 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0107;AVGPOST=0.9996;RSQ=0.9840;ERATE=0.0004;THETA=0.0010;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 25303037 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9149;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25303050 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0086;AVGPOST=0.9987;RSQ=0.9467;ERATE=0.0004;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 25303064 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25303240 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0056;AVGPOST=0.9989;RSQ=0.9187;ERATE=0.0004;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25303252 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25303384 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25303415 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0031;AVGPOST=0.9996;RSQ=0.9587;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25303462 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0198;AVGPOST=0.9977;RSQ=0.9511;ERATE=0.0026;THETA=0.0005;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 25303537 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0040;AVGPOST=0.9991;RSQ=0.9211;ERATE=0.0005;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25303576 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6170;AVGPOST=0.9980;RSQ=0.9963;ERATE=0.0004;THETA=0.0012;AC=1348;AN=2184 GT:DS:GL:BD 0.61721611 1
1 25303630 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0021;AVGPOST=0.9989;RSQ=0.8152;ERATE=0.0003;THETA=0.0019;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25303762 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.962;LDAF=0.7458;AVGPOST=0.9853;RSQ=0.9727;ERATE=0.0008;THETA=0.0005;AC=1633;AN=2184 GT:DS:GL:BD 0.74771065 1
1 25303904 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.874;LDAF=0.0169;AVGPOST=0.9971;RSQ=0.9326;ERATE=0.0004;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 25303905 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6077;AVGPOST=0.9958;RSQ=0.9930;ERATE=0.0005;THETA=0.0025;AC=1329;AN=2184 GT:DS:GL:BD 0.60851645 1
1 25303944 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.6203;AVGPOST=0.9946;RSQ=0.9909;ERATE=0.0005;THETA=0.0013;AC=1357;AN=2184 GT:DS:GL:BD 0.62133700 1
1 25303946 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.959;LDAF=0.0128;AVGPOST=0.9976;RSQ=0.9247;ERATE=0.0005;THETA=0.0025;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 25304057 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0139;AVGPOST=0.9987;RSQ=0.9604;ERATE=0.0004;THETA=0.0009;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 25304134 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.961;BRSQ=0.932;LDAF=0.5771;AVGPOST=0.9611;RSQ=0.9406;ERATE=0.0025;THETA=0.0126;AC=1276;AN=2184 GT:DS:GL:BD 0.58424908 1
1 25304462 . C CCT 19841 PASS INDEL;BAVGPOST=0.961;BRSQ=0.938;LDAF=0.5639;AVGPOST=0.9496;RSQ=0.9260;ERATE=0.0056;THETA=0.0010;AC=1250;AN=2184 GT:DS:GL:BD 0.57234430 1
1 25304463 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.961;BRSQ=0.939;LDAF=0.5702;AVGPOST=0.9631;RSQ=0.9478;ERATE=0.0007;THETA=0.0009;AC=1254;AN=2184 GT:DS:GL:BD 0.57417583 1
1 25304464 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.960;BRSQ=0.938;LDAF=0.5704;AVGPOST=0.9637;RSQ=0.9489;ERATE=0.0005;THETA=0.0009;AC=1254;AN=2184 GT:DS:GL:BD 0.57417583 1
1 25304464 . C CT 122 PASS INDEL;BAVGPOST=0.910;BRSQ=0.216;LDAF=0.0841;AVGPOST=0.8793;RSQ=0.4067;ERATE=0.0071;THETA=0.0011;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 25304552 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.977;LDAF=0.5613;AVGPOST=0.9834;RSQ=0.9736;ERATE=0.0043;THETA=0.0022;AC=1229;AN=2184 GT:DS:GL:BD 0.56272894 1
1 25304637 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7809;ERATE=0.0004;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25304638 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7624;ERATE=0.0004;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25304927 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0004;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25305007 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5888;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25305037 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0042;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25305038 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6265;ERATE=0.0004;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25305104 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0054;AVGPOST=0.9989;RSQ=0.9247;ERATE=0.0004;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25305114 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6016;AVGPOST=0.9959;RSQ=0.9935;ERATE=0.0003;THETA=0.0021;AC=1314;AN=2184 GT:DS:GL:BD 0.60164833 1
1 25305155 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.823;LDAF=0.0058;AVGPOST=0.9977;RSQ=0.8342;ERATE=0.0003;THETA=0.0054;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25305157 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.983;LDAF=0.5979;AVGPOST=0.9945;RSQ=0.9919;ERATE=0.0003;THETA=0.0013;AC=1306;AN=2184 GT:DS:GL:BD 0.59798533 1
1 25305160 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.983;LDAF=0.5984;AVGPOST=0.9938;RSQ=0.9905;ERATE=0.0005;THETA=0.0007;AC=1307;AN=2184 GT:DS:GL:BD 0.59844321 1
1 25305172 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.5982;AVGPOST=0.9943;RSQ=0.9912;ERATE=0.0004;THETA=0.0041;AC=1307;AN=2184 GT:DS:GL:BD 0.59844321 1
1 25305176 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9449;ERATE=0.0003;THETA=0.0032;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25305186 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.844;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7890;ERATE=0.0007;THETA=0.0025;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25305201 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0005;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25305210 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0040;AVGPOST=0.9989;RSQ=0.8851;ERATE=0.0013;THETA=0.0027;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25305260 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.970;LDAF=0.7322;AVGPOST=0.9912;RSQ=0.9836;ERATE=0.0007;THETA=0.0014;AC=1603;AN=2184 GT:DS:GL:BD 0.73397434 1
1 25305261 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.940;LDAF=0.1189;AVGPOST=0.9898;RSQ=0.9667;ERATE=0.0005;THETA=0.0009;AC=263;AN=2184 GT:DS:GL:BD 0.12042125 0
1 25305321 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0115;AVGPOST=0.9984;RSQ=0.9440;ERATE=0.0004;THETA=0.0008;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 25305341 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0017;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25305494 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6598;ERATE=0.0005;THETA=0.0026;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25305567 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.889;LDAF=0.0209;AVGPOST=0.9944;RSQ=0.8950;ERATE=0.0010;THETA=0.0006;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 25305607 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.7482;AVGPOST=0.9946;RSQ=0.9897;ERATE=0.0007;THETA=0.0009;AC=1636;AN=2184 GT:DS:GL:BD 0.74908423 1
1 25305616 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0045;AVGPOST=0.9997;RSQ=0.9692;ERATE=0.0003;THETA=0.0017;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25305622 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8893;ERATE=0.0004;THETA=0.0025;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25305659 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8938;ERATE=0.0003;THETA=0.0018;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25305665 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.943;LDAF=0.0135;AVGPOST=0.9970;RSQ=0.9128;ERATE=0.0005;THETA=0.0015;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 25305673 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.7456;AVGPOST=0.9935;RSQ=0.9880;ERATE=0.0004;THETA=0.0032;AC=1632;AN=2184 GT:DS:GL:BD 0.74725276 1
1 25305704 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.726;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8824;ERATE=0.0004;THETA=0.0087;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25305705 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0053;AVGPOST=0.9984;RSQ=0.8648;ERATE=0.0004;THETA=0.0058;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25305749 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.923;LDAF=0.0106;AVGPOST=0.9988;RSQ=0.9566;ERATE=0.0012;THETA=0.0018;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 25305783 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.958;LDAF=0.5872;AVGPOST=0.9726;RSQ=0.9565;ERATE=0.0013;THETA=0.0494;AC=1283;AN=2184 GT:DS:GL:BD 0.58745420 1
1 25305792 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4694;ERATE=0.0005;THETA=0.0324;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25306013 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0004;THETA=0.0380;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25306092 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8816;ERATE=0.0003;THETA=0.0495;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25306130 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0363;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25306423 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0031;AVGPOST=0.9984;RSQ=0.7837;ERATE=0.0007;THETA=0.0332;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25306442 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.818;LDAF=0.0279;AVGPOST=0.9919;RSQ=0.8732;ERATE=0.0027;THETA=0.0237;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 25306522 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.770;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5253;ERATE=0.0004;THETA=0.0308;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25306561 rs71589764 A AT 14571 PASS INDEL;BAVGPOST=0.912;BRSQ=0.862;LDAF=0.4460;AVGPOST=0.9163;RSQ=0.8928;ERATE=0.0007;THETA=0.0017;AC=979;AN=2184 GT:DS:GL:BD 0.44826007 0
1 25306562 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.951;BRSQ=0.924;LDAF=0.4898;AVGPOST=0.9483;RSQ=0.9326;ERATE=0.0005;THETA=0.0009;AC=1065;AN=2184 GT:DS:GL:BD 0.48763737 0
1 25306563 . CA C 8198 PASS INDEL;BAVGPOST=0.910;BRSQ=0.858;LDAF=0.4415;AVGPOST=0.9122;RSQ=0.8877;ERATE=0.0004;THETA=0.0013;AC=985;AN=2184 GT:DS:GL:BD 0.45100734 0
1 25306564 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.950;BRSQ=0.924;LDAF=0.4922;AVGPOST=0.9464;RSQ=0.9307;ERATE=0.0005;THETA=0.0195;AC=1068;AN=2184 GT:DS:GL:BD 0.48901099 0
1 25306613 . C CT 1102 PASS INDEL;BAVGPOST=0.976;BRSQ=0.634;LDAF=0.0343;AVGPOST=0.9719;RSQ=0.6658;ERATE=0.0078;THETA=0.0256;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 25306618 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.508;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0003;THETA=0.0171;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25306621 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.7318;ERATE=0.0003;THETA=0.0281;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25306640 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.624;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5834;ERATE=0.0004;THETA=0.0145;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25306655 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.745;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0004;THETA=0.0112;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25306788 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0017;AVGPOST=0.9986;RSQ=0.6675;ERATE=0.0003;THETA=0.0262;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25306821 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0004;THETA=0.0233;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25306949 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0181;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25306958 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.936;LDAF=0.0228;AVGPOST=0.9973;RSQ=0.9575;ERATE=0.0036;THETA=0.0135;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 25306965 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.8015;ERATE=0.0003;THETA=0.0202;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25307005 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0091;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25307165 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.848;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9058;ERATE=0.0005;THETA=0.0121;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25307308 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.664;LDAF=0.0027;AVGPOST=0.9980;RSQ=0.6851;ERATE=0.0005;THETA=0.0146;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25307434 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.799;LDAF=0.0108;AVGPOST=0.9945;RSQ=0.8076;ERATE=0.0007;THETA=0.0178;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 25307439 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.638;LDAF=0.0019;AVGPOST=0.9991;RSQ=0.8160;ERATE=0.0003;THETA=0.0080;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25307469 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6947;ERATE=0.0004;THETA=0.0111;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25307523 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0004;THETA=0.0229;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25307533 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0004;THETA=0.0152;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25307697 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0004;THETA=0.0128;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25307831 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5706;ERATE=0.0004;THETA=0.0174;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25308018 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.372;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4467;ERATE=0.0006;THETA=0.0054;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25308058 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.867;LDAF=0.0065;AVGPOST=0.9982;RSQ=0.8770;ERATE=0.0004;THETA=0.0055;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 25308080 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.595;LDAF=0.0047;AVGPOST=0.9958;RSQ=0.6208;ERATE=0.0011;THETA=0.0170;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25308093 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.752;LDAF=0.0022;AVGPOST=0.9977;RSQ=0.5710;ERATE=0.0006;THETA=0.0231;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25308102 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5673;ERATE=0.0004;THETA=0.0086;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25308226 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6081;ERATE=0.0005;THETA=0.0168;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25308257 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.950;BRSQ=0.869;LDAF=0.1964;AVGPOST=0.9478;RSQ=0.8922;ERATE=0.0006;THETA=0.0041;AC=405;AN=2184 GT:DS:GL:BD 0.18543956 0
1 25308276 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.935;BRSQ=0.887;LDAF=0.3860;AVGPOST=0.9248;RSQ=0.8959;ERATE=0.0016;THETA=0.0048;AC=821;AN=2184 GT:DS:GL:BD 0.37591577 0
1 25308316 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.846;LDAF=0.0170;AVGPOST=0.9931;RSQ=0.8468;ERATE=0.0007;THETA=0.0130;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 25308380 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.643;LDAF=0.0294;AVGPOST=0.9760;RSQ=0.6578;ERATE=0.0028;THETA=0.0051;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 25308500 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.912;LDAF=0.0181;AVGPOST=0.9948;RSQ=0.8799;ERATE=0.0026;THETA=0.0172;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 25308531 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.914;LDAF=0.1610;AVGPOST=0.9730;RSQ=0.9273;ERATE=0.0019;THETA=0.0173;AC=344;AN=2184 GT:DS:GL:BD 0.15750916 0
1 25308588 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.621;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0212;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25308755 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0021;AVGPOST=0.9975;RSQ=0.5256;ERATE=0.0006;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25308762 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0027;AVGPOST=0.9981;RSQ=0.7092;ERATE=0.0004;THETA=0.0065;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25308811 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.585;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6526;ERATE=0.0003;THETA=0.0087;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25308928 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.616;LDAF=0.0027;AVGPOST=0.9974;RSQ=0.5785;ERATE=0.0007;THETA=0.0209;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25309023 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.894;LDAF=0.0082;AVGPOST=0.9981;RSQ=0.9034;ERATE=0.0004;THETA=0.0104;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 25309244 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.723;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0061;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25309259 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.949;BRSQ=0.913;LDAF=0.4766;AVGPOST=0.9486;RSQ=0.9276;ERATE=0.0016;THETA=0.0101;AC=1032;AN=2184 GT:DS:GL:BD 0.47252747 0
1 25309338 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0027;AVGPOST=0.9979;RSQ=0.6565;ERATE=0.0007;THETA=0.0079;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25309348 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5706;ERATE=0.0005;THETA=0.0037;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25309397 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0032;AVGPOST=0.9987;RSQ=0.8278;ERATE=0.0009;THETA=0.0117;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25309605 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.657;LDAF=0.0024;AVGPOST=0.9971;RSQ=0.5585;ERATE=0.0008;THETA=0.0052;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25309621 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25309668 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6265;ERATE=0.0003;THETA=0.0082;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25309701 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0036;AVGPOST=0.9984;RSQ=0.7966;ERATE=0.0005;THETA=0.0056;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25309709 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.980;LDAF=0.2930;AVGPOST=0.9903;RSQ=0.9813;ERATE=0.0007;THETA=0.0008;AC=640;AN=2184 GT:DS:GL:BD 0.29304031 0
1 25309716 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0066;AVGPOST=0.9984;RSQ=0.9041;ERATE=0.0003;THETA=0.0026;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 25309727 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0263;AVGPOST=0.9987;RSQ=0.9795;ERATE=0.0004;THETA=0.0075;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 25309735 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0020;AVGPOST=0.9973;RSQ=0.5425;ERATE=0.0005;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25309822 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.989;LDAF=0.4981;AVGPOST=0.9921;RSQ=0.9885;ERATE=0.0013;THETA=0.0005;AC=1085;AN=2184 GT:DS:GL:BD 0.49679488 0
1 25309925 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0879;AVGPOST=0.9984;RSQ=0.9919;ERATE=0.0005;THETA=0.0005;AC=192;AN=2184 GT:DS:GL:BD 0.08791209 0
1 25309975 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0109;AVGPOST=0.9992;RSQ=0.9678;ERATE=0.0003;THETA=0.0007;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 25309984 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.647;LDAF=0.0048;AVGPOST=0.9949;RSQ=0.5504;ERATE=0.0031;THETA=0.0045;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25310008 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25310009 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.986;LDAF=0.3131;AVGPOST=0.9913;RSQ=0.9849;ERATE=0.0011;THETA=0.0006;AC=684;AN=2184 GT:DS:GL:BD 0.31318682 0
1 25310023 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5659;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25310031 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0206;AVGPOST=0.9991;RSQ=0.9839;ERATE=0.0004;THETA=0.0006;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 25310078 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0045;AVGPOST=0.9991;RSQ=0.9151;ERATE=0.0004;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25310094 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.864;LDAF=0.0052;AVGPOST=0.9983;RSQ=0.8519;ERATE=0.0011;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25310114 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0261;AVGPOST=0.9998;RSQ=0.9959;ERATE=0.0003;THETA=0.0015;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 25310194 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0261;AVGPOST=0.9999;RSQ=0.9976;ERATE=0.0003;THETA=0.0040;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 25310196 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0188;AVGPOST=0.9976;RSQ=0.9552;ERATE=0.0004;THETA=0.0008;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 25310308 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7952;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25310328 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8417;ERATE=0.0010;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25310332 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25310390 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.7624;ERATE=0.0005;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25310399 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0054;AVGPOST=0.9991;RSQ=0.9252;ERATE=0.0004;THETA=0.0018;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25310456 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6437;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25310497 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7712;ERATE=0.0007;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25310514 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0878;AVGPOST=0.9974;RSQ=0.9875;ERATE=0.0009;THETA=0.0008;AC=190;AN=2184 GT:DS:GL:BD 0.08699634 0
1 25310617 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6553;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25310646 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8571;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25310662 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0051;AVGPOST=0.9989;RSQ=0.9180;ERATE=0.0004;THETA=0.0031;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25310682 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.0428;AVGPOST=0.9985;RSQ=0.9863;ERATE=0.0004;THETA=0.0006;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 25310720 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7543;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25310721 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0611;AVGPOST=0.9989;RSQ=0.9942;ERATE=0.0004;THETA=0.0017;AC=133;AN=2184 GT:DS:GL:BD 0.06089744 0
1 25310733 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.877;LDAF=0.0193;AVGPOST=0.9962;RSQ=0.9251;ERATE=0.0005;THETA=0.0006;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 25310750 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6968;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25310765 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.713;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.6223;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25310772 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0193;AVGPOST=0.9998;RSQ=0.9947;ERATE=0.0003;THETA=0.0008;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 25310795 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0198;AVGPOST=0.9991;RSQ=0.9806;ERATE=0.0004;THETA=0.0004;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 25310810 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25310833 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7096;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25310851 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0060;AVGPOST=0.9987;RSQ=0.9131;ERATE=0.0005;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 25310865 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7349;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25310884 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25310950 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.913;LDAF=0.0092;AVGPOST=0.9979;RSQ=0.9151;ERATE=0.0005;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 25311242 . G GC 14 PASS INDEL;BAVGPOST=0.999;BRSQ=0.640;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.6937;ERATE=0.0004;THETA=0.0027;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25311426 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.715;LDAF=0.0038;AVGPOST=0.9981;RSQ=0.8152;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25311443 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0024;AVGPOST=0.9992;RSQ=0.8560;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25311636 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.849;LDAF=0.0036;AVGPOST=0.9987;RSQ=0.8438;ERATE=0.0003;THETA=0.0011;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25311662 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6245;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25311706 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0034;AVGPOST=0.9994;RSQ=0.9284;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25311917 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8538;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25311926 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7682;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25312000 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.9137;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25312023 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0104;AVGPOST=0.9984;RSQ=0.9521;ERATE=0.0004;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 25312028 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.992;LDAF=0.5189;AVGPOST=0.9947;RSQ=0.9923;ERATE=0.0006;THETA=0.0008;AC=1134;AN=2184 GT:DS:GL:BD 0.51923078 1
1 25312035 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9604;ERATE=0.0003;THETA=0.0013;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25312179 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25312234 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25312279 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0194;AVGPOST=0.9997;RSQ=0.9937;ERATE=0.0003;THETA=0.0007;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 25312348 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.903;LDAF=0.0135;AVGPOST=0.9970;RSQ=0.9212;ERATE=0.0003;THETA=0.0002;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 25312572 . TTGTC T 155 PASS INDEL;BAVGPOST=0.999;BRSQ=0.752;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6433;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25312599 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25312613 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6678;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25312637 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0606;AVGPOST=0.9993;RSQ=0.9966;ERATE=0.0003;THETA=0.0006;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 25312690 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6373;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25312783 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6472;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25312962 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.5796;AVGPOST=0.9947;RSQ=0.9933;ERATE=0.0005;THETA=0.0007;AC=1268;AN=2184 GT:DS:GL:BD 0.58058608 1
1 25313113 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25313427 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.8846;ERATE=0.0004;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25313475 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7068;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25313704 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.6241;ERATE=0.0005;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25313728 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0033;AVGPOST=0.9984;RSQ=0.7862;ERATE=0.0004;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25313743 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0224;AVGPOST=0.9993;RSQ=0.9867;ERATE=0.0004;THETA=0.0007;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 25313798 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.871;LDAF=0.0125;AVGPOST=0.9970;RSQ=0.8945;ERATE=0.0006;THETA=0.0056;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 25313845 . T TA 25964 PASS INDEL;BAVGPOST=0.988;BRSQ=0.980;LDAF=0.5681;AVGPOST=0.9898;RSQ=0.9860;ERATE=0.0005;THETA=0.0003;AC=1241;AN=2184 GT:DS:GL:BD 0.56822342 1
1 25313846 rs5773117 A AC 65196 PASS INDEL;BAVGPOST=0.988;BRSQ=0.980;LDAF=0.5680;AVGPOST=0.9900;RSQ=0.9865;ERATE=0.0005;THETA=0.0006;AC=1240;AN=2184 GT:DS:GL:BD 0.56776559 1
1 25313862 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0191;AVGPOST=0.9989;RSQ=0.9797;ERATE=0.0005;THETA=0.0013;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 25313996 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.7944;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25314069 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25314100 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7251;ERATE=0.0003;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25314104 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.978;LDAF=0.0195;AVGPOST=0.9994;RSQ=0.9867;ERATE=0.0004;THETA=0.0005;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 25314118 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.898;LDAF=0.0231;AVGPOST=0.9971;RSQ=0.9466;ERATE=0.0004;THETA=0.0006;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 25314178 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6228;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25314205 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7739;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25314210 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25314248 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7901;ERATE=0.0005;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25314309 . G GT 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5790;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25314552 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0033;AVGPOST=0.9992;RSQ=0.9266;ERATE=0.0003;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25314769 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8111;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25314784 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7186;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25314894 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.2900;AVGPOST=0.9938;RSQ=0.9883;ERATE=0.0003;THETA=0.0008;AC=633;AN=2184 GT:DS:GL:BD 0.28983516 0
1 25314914 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0750;AVGPOST=0.9992;RSQ=0.9965;ERATE=0.0003;THETA=0.0004;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 25314918 . A AT 12 PASS INDEL;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25314998 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8653;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25315318 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0242;AVGPOST=0.9989;RSQ=0.9844;ERATE=0.0005;THETA=0.0005;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 25315329 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.752;LDAF=0.0046;AVGPOST=0.9983;RSQ=0.8758;ERATE=0.0004;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25315410 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0328;AVGPOST=0.9977;RSQ=0.9731;ERATE=0.0004;THETA=0.0106;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 25315545 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0004;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25315588 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.1362;AVGPOST=0.9978;RSQ=0.9950;ERATE=0.0004;THETA=0.0018;AC=299;AN=2184 GT:DS:GL:BD 0.13690476 0
1 25315805 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0304;AVGPOST=0.9994;RSQ=0.9933;ERATE=0.0003;THETA=0.0009;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 25315849 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0289;AVGPOST=0.9994;RSQ=0.9936;ERATE=0.0003;THETA=0.0076;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 25315883 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0267;AVGPOST=0.9989;RSQ=0.9851;ERATE=0.0003;THETA=0.0019;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 25315887 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9700;ERATE=0.0003;THETA=0.0033;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25315929 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.808;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7959;ERATE=0.0006;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25316161 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0004;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25316227 . C CT 1211 PASS INDEL;BAVGPOST=0.977;BRSQ=0.686;LDAF=0.0440;AVGPOST=0.9611;RSQ=0.6390;ERATE=0.0085;THETA=0.0059;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 25316270 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.760;LDAF=0.0040;AVGPOST=0.9979;RSQ=0.7987;ERATE=0.0004;THETA=0.0029;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25316399 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.902;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0065;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25316497 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8645;ERATE=0.0005;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25316611 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9304;ERATE=0.0004;THETA=0.0022;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25316682 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25316826 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9215;ERATE=0.0003;THETA=0.0059;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25316837 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0004;THETA=0.0063;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25316880 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25316924 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.984;LDAF=0.1842;AVGPOST=0.9942;RSQ=0.9861;ERATE=0.0009;THETA=0.0006;AC=402;AN=2184 GT:DS:GL:BD 0.18406594 0
1 25316935 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8526;ERATE=0.0004;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25316971 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0029;AVGPOST=0.9993;RSQ=0.8978;ERATE=0.0003;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25317027 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.724;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7335;ERATE=0.0004;THETA=0.0019;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25317074 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0329;AVGPOST=0.9998;RSQ=0.9975;ERATE=0.0003;THETA=0.0016;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 25317079 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7986;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25317125 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6299;ERATE=0.0003;THETA=0.0034;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25317228 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.8433;AVGPOST=0.9968;RSQ=0.9907;ERATE=0.0004;THETA=0.0005;AC=1844;AN=2184 GT:DS:GL:BD 0.84432232 1
1 25317285 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.983;LDAF=0.8263;AVGPOST=0.9947;RSQ=0.9861;ERATE=0.0019;THETA=0.0011;AC=1808;AN=2184 GT:DS:GL:BD 0.82783884 1
1 25317405 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.823;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9550;ERATE=0.0004;THETA=0.0028;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25317450 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0347;AVGPOST=0.9982;RSQ=0.9807;ERATE=0.0004;THETA=0.0018;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 25317548 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0031;AVGPOST=0.9990;RSQ=0.8722;ERATE=0.0003;THETA=0.0017;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25317572 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0342;AVGPOST=0.9993;RSQ=0.9917;ERATE=0.0004;THETA=0.0030;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 25317684 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1250;AVGPOST=0.9975;RSQ=0.9911;ERATE=0.0004;THETA=0.0003;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 25317703 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0052;AVGPOST=0.9992;RSQ=0.9271;ERATE=0.0004;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25317711 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1464;AVGPOST=0.9980;RSQ=0.9932;ERATE=0.0004;THETA=0.0007;AC=320;AN=2184 GT:DS:GL:BD 0.14652015 0
1 25317746 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0323;AVGPOST=0.9986;RSQ=0.9870;ERATE=0.0003;THETA=0.0010;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 25317802 . A AT 5473 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0363;AVGPOST=0.9966;RSQ=0.9649;ERATE=0.0004;THETA=0.0008;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 25317912 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25317931 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0042;AVGPOST=0.9997;RSQ=0.9639;ERATE=0.0004;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25317952 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.6881;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25317959 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6413;ERATE=0.0004;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25318028 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25318031 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0349;AVGPOST=0.9997;RSQ=0.9959;ERATE=0.0004;THETA=0.0004;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 25318119 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0344;AVGPOST=0.9995;RSQ=0.9942;ERATE=0.0003;THETA=0.0006;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 25318121 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.985;LDAF=0.1658;AVGPOST=0.9923;RSQ=0.9825;ERATE=0.0010;THETA=0.0036;AC=362;AN=2184 GT:DS:GL:BD 0.16575092 0
1 25318142 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9812;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25318225 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0017;AVGPOST=0.9995;RSQ=0.9023;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25318326 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25318388 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25318471 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0231;AVGPOST=0.9995;RSQ=0.9901;ERATE=0.0005;THETA=0.0020;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 25318565 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25318769 rs112880100 A AAAAAC 15567 PASS INDEL;BAVGPOST=0.957;BRSQ=0.846;LDAF=0.1453;AVGPOST=0.9624;RSQ=0.8918;ERATE=0.0066;THETA=0.0006;AC=315;AN=2184 GT:DS:GL:BD 0.14423077 0
1 25319068 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0095;AVGPOST=0.9978;RSQ=0.8937;ERATE=0.0005;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 25319106 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6578;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25319107 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5768;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25319232 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7705;ERATE=0.0004;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25319326 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.9104;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25319591 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.816;LDAF=0.0091;AVGPOST=0.9953;RSQ=0.8059;ERATE=0.0005;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 25319751 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3957;AVGPOST=0.9970;RSQ=0.9959;ERATE=0.0005;THETA=0.0003;AC=865;AN=2184 GT:DS:GL:BD 0.39606228 0
1 25319773 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0014;AVGPOST=0.9993;RSQ=0.7944;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25319873 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25319920 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7860;ERATE=0.0003;THETA=0.0038;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25320070 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25320236 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1143;AVGPOST=0.9989;RSQ=0.9961;ERATE=0.0003;THETA=0.0005;AC=249;AN=2184 GT:DS:GL:BD 0.11401099 0
1 25320319 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7641;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25320348 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0241;AVGPOST=0.9983;RSQ=0.9768;ERATE=0.0004;THETA=0.0004;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 25320473 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.698;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25320515 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7548;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25320612 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6526;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25320628 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.8853;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25320687 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.563;LDAF=0.0019;AVGPOST=0.9977;RSQ=0.5140;ERATE=0.0006;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25320707 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25320713 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0127;AVGPOST=0.9981;RSQ=0.9339;ERATE=0.0004;THETA=0.0007;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 25320780 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6151;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25320781 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25320844 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9201;ERATE=0.0007;THETA=0.0040;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25320898 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9508;ERATE=0.0009;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25320904 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9090;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25320938 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6828;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25320945 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6714;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25321087 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0032;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25321128 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5969;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25321218 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.2159;AVGPOST=0.9972;RSQ=0.9943;ERATE=0.0004;THETA=0.0005;AC=472;AN=2184 GT:DS:GL:BD 0.21611722 0
1 25321247 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0013;AVGPOST=0.9998;RSQ=0.9210;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25321267 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5802;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25321441 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0107;AVGPOST=0.9980;RSQ=0.9241;ERATE=0.0004;THETA=0.0009;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 25321557 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.762;LDAF=0.0103;AVGPOST=0.9958;RSQ=0.8362;ERATE=0.0005;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 25321597 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.1114;AVGPOST=0.9983;RSQ=0.9928;ERATE=0.0005;THETA=0.0011;AC=243;AN=2184 GT:DS:GL:BD 0.11126374 0
1 25321754 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3812;AVGPOST=0.9957;RSQ=0.9944;ERATE=0.0004;THETA=0.0007;AC=836;AN=2184 GT:DS:GL:BD 0.38278389 0
1 25321765 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1122;AVGPOST=0.9989;RSQ=0.9955;ERATE=0.0004;THETA=0.0030;AC=245;AN=2184 GT:DS:GL:BD 0.11217949 0
1 25321791 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0093;AVGPOST=0.9995;RSQ=0.9756;ERATE=0.0003;THETA=0.0007;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 25321836 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.719;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4876;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25321989 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0030;AVGPOST=0.9983;RSQ=0.7764;ERATE=0.0008;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25322143 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9227;ERATE=0.0003;THETA=0.0015;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25322176 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1378;AVGPOST=0.9985;RSQ=0.9952;ERATE=0.0003;THETA=0.0003;AC=302;AN=2184 GT:DS:GL:BD 0.13827839 0
1 25322210 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7425;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25322230 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1378;AVGPOST=0.9990;RSQ=0.9965;ERATE=0.0003;THETA=0.0008;AC=302;AN=2184 GT:DS:GL:BD 0.13827839 0
1 25322245 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6432;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25322272 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5468;ERATE=0.0004;THETA=0.0039;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25322275 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0065;AVGPOST=0.9988;RSQ=0.9147;ERATE=0.0005;THETA=0.0024;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 25322389 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0021;AVGPOST=0.9978;RSQ=0.5743;ERATE=0.0005;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25322498 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.893;LDAF=0.0156;AVGPOST=0.9953;RSQ=0.8912;ERATE=0.0005;THETA=0.0049;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 25322499 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0106;AVGPOST=0.9998;RSQ=0.9919;ERATE=0.0003;THETA=0.0008;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 25322523 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.912;LDAF=0.0129;AVGPOST=0.9971;RSQ=0.9179;ERATE=0.0005;THETA=0.0007;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 25322574 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.983;LDAF=0.8119;AVGPOST=0.9912;RSQ=0.9773;ERATE=0.0018;THETA=0.0017;AC=1775;AN=2184 GT:DS:GL:BD 0.81272894 1
1 25322649 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0045;AVGPOST=0.9980;RSQ=0.8179;ERATE=0.0006;THETA=0.0017;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25322658 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.603;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6854;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25322713 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.4539;ERATE=0.0005;THETA=0.0020;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25322777 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.975;LDAF=0.7192;AVGPOST=0.9890;RSQ=0.9792;ERATE=0.0028;THETA=0.0046;AC=1573;AN=2184 GT:DS:GL:BD 0.72023809 1
1 25322808 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.984;LDAF=0.8557;AVGPOST=0.9942;RSQ=0.9827;ERATE=0.0004;THETA=0.0004;AC=1871;AN=2184 GT:DS:GL:BD 0.85668498 1
1 25322811 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.985;LDAF=0.8563;AVGPOST=0.9952;RSQ=0.9848;ERATE=0.0004;THETA=0.0051;AC=1872;AN=2184 GT:DS:GL:BD 0.85714287 1
1 25322839 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.953;LDAF=0.8680;AVGPOST=0.9874;RSQ=0.9578;ERATE=0.0035;THETA=0.0043;AC=1894;AN=2184 GT:DS:GL:BD 0.86721611 1
1 25322874 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6457;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25323010 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25323047 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.980;LDAF=0.6652;AVGPOST=0.9863;RSQ=0.9785;ERATE=0.0023;THETA=0.0064;AC=1455;AN=2184 GT:DS:GL:BD 0.66620880 1
1 25323230 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.589;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5491;ERATE=0.0004;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25323337 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0097;AVGPOST=0.9998;RSQ=0.9909;ERATE=0.0003;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 25323341 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25323342 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5667;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25323352 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0003;THETA=0.0048;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25323372 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8456;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25323378 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0004;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25323446 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6328;ERATE=0.0003;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25323464 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.971;LDAF=0.1374;AVGPOST=0.9929;RSQ=0.9773;ERATE=0.0021;THETA=0.0069;AC=296;AN=2184 GT:DS:GL:BD 0.13553114 0
1 25323694 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.807;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6737;ERATE=0.0003;THETA=0.0072;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25323842 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7194;ERATE=0.0004;THETA=0.0043;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25323864 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.952;LDAF=0.4509;AVGPOST=0.9739;RSQ=0.9649;ERATE=0.0005;THETA=0.0053;AC=983;AN=2184 GT:DS:GL:BD 0.45009157 0
1 25323897 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7616;ERATE=0.0007;THETA=0.0045;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25323948 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9593;ERATE=0.0004;THETA=0.0023;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25324039 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0089;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25324266 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.517;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4643;ERATE=0.0006;THETA=0.0040;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25324327 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.691;LDAF=0.0026;AVGPOST=0.9976;RSQ=0.6517;ERATE=0.0004;THETA=0.0072;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25324355 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.950;LDAF=0.0224;AVGPOST=0.9968;RSQ=0.9429;ERATE=0.0004;THETA=0.0045;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 25324434 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0072;AVGPOST=0.9990;RSQ=0.9403;ERATE=0.0004;THETA=0.0025;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 25324487 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.730;LDAF=0.0040;AVGPOST=0.9973;RSQ=0.7212;ERATE=0.0003;THETA=0.0090;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25324769 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.693;BRSQ=0.319;LDAF=0.7262;AVGPOST=0.7546;RSQ=0.5142;ERATE=0.0117;THETA=0.0055;AC=1728;AN=2184 GT:DS:GL:BD 0.79120880 1
1 25324943 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.830;LDAF=0.0085;AVGPOST=0.9947;RSQ=0.7465;ERATE=0.0006;THETA=0.0054;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 25324948 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.903;LDAF=0.0162;AVGPOST=0.9922;RSQ=0.7904;ERATE=0.0015;THETA=0.0007;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 25324997 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.726;LDAF=0.0039;AVGPOST=0.9972;RSQ=0.6962;ERATE=0.0005;THETA=0.0078;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25325115 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0058;AVGPOST=0.9994;RSQ=0.9514;ERATE=0.0004;THETA=0.0080;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 25325168 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.719;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6351;ERATE=0.0003;THETA=0.0051;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25325271 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9335;ERATE=0.0003;THETA=0.0027;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25325368 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0023;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25325404 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.742;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6885;ERATE=0.0003;THETA=0.0089;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25325491 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7524;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25325758 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.2280;AVGPOST=0.9955;RSQ=0.9912;ERATE=0.0005;THETA=0.0034;AC=499;AN=2184 GT:DS:GL:BD 0.22847985 0
1 25325837 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.5106;AVGPOST=0.9979;RSQ=0.9968;ERATE=0.0004;THETA=0.0005;AC=1113;AN=2184 GT:DS:GL:BD 0.50961536 1
1 25325841 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25326075 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6616;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25326122 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0050;AVGPOST=0.9991;RSQ=0.9196;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25326313 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.4481;AVGPOST=0.9974;RSQ=0.9962;ERATE=0.0006;THETA=0.0005;AC=976;AN=2184 GT:DS:GL:BD 0.44688645 0
1 25326363 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0062;AVGPOST=0.9995;RSQ=0.9681;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 25326549 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.984;LDAF=0.1959;AVGPOST=0.9978;RSQ=0.9950;ERATE=0.0004;THETA=0.0007;AC=428;AN=2184 GT:DS:GL:BD 0.19597070 0
1 25326657 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.2169;AVGPOST=0.9980;RSQ=0.9957;ERATE=0.0004;THETA=0.0005;AC=474;AN=2184 GT:DS:GL:BD 0.21703297 0
1 25326688 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0614;AVGPOST=0.9983;RSQ=0.9877;ERATE=0.0005;THETA=0.0005;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 25326786 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2564;AVGPOST=0.9941;RSQ=0.9891;ERATE=0.0015;THETA=0.0002;AC=561;AN=2184 GT:DS:GL:BD 0.25686812 0
1 25326868 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7573;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25326909 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.723;LDAF=0.0093;AVGPOST=0.9923;RSQ=0.6494;ERATE=0.0009;THETA=0.0034;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 25327046 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6564;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25327047 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.715;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6537;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25327050 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6495;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25327073 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0041;AVGPOST=0.9991;RSQ=0.8958;ERATE=0.0006;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25327209 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9944;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 25327406 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9129;AVGPOST=0.9993;RSQ=0.9965;ERATE=0.0003;THETA=0.0004;AC=1994;AN=2184 GT:DS:GL:BD 0.91300368 1
1 25327477 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9895;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25327564 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0113;AVGPOST=0.9994;RSQ=0.9755;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 25327653 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.4303;AVGPOST=0.9956;RSQ=0.9945;ERATE=0.0005;THETA=0.0005;AC=941;AN=2184 GT:DS:GL:BD 0.43086082 0
1 25327717 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.756;LDAF=0.0030;AVGPOST=0.9980;RSQ=0.7636;ERATE=0.0004;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25327827 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.574;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4395;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25327994 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0428;AVGPOST=0.9983;RSQ=0.9848;ERATE=0.0005;THETA=0.0020;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 25328009 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.2739;AVGPOST=0.9965;RSQ=0.9934;ERATE=0.0008;THETA=0.0004;AC=599;AN=2184 GT:DS:GL:BD 0.27426741 0
1 25328166 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.486;LDAF=0.0033;AVGPOST=0.9945;RSQ=0.3541;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25328307 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9105;AVGPOST=0.9959;RSQ=0.9806;ERATE=0.0005;THETA=0.0007;AC=1991;AN=2184 GT:DS:GL:BD 0.91163003 1
1 25328347 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.983;LDAF=0.7418;AVGPOST=0.9870;RSQ=0.9735;ERATE=0.0010;THETA=0.0006;AC=1623;AN=2184 GT:DS:GL:BD 0.74313188 1
1 25328362 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.669;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.5348;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25328470 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.703;BRSQ=0.165;LDAF=0.2938;AVGPOST=0.6587;RSQ=0.2817;ERATE=0.0438;THETA=0.0004;AC=351;AN=2184 GT:DS:GL:BD 0.16071428 0
1 25328539 . TTAATA T 962 PASS INDEL;BAVGPOST=0.689;BRSQ=0.070;LDAF=0.2666;AVGPOST=0.6547;RSQ=0.2498;ERATE=0.0312;THETA=0.0005;AC=295;AN=2184 GT:DS:GL:BD 0.13507326 0
1 25328541 . A AAT 290 PASS INDEL;BAVGPOST=0.719;BRSQ=0.077;LDAF=0.2463;AVGPOST=0.6757;RSQ=0.2791;ERATE=0.0214;THETA=0.0025;AC=262;AN=2184 GT:DS:GL:BD 0.11996337 0
1 25328542 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.878;BRSQ=0.159;LDAF=0.1797;AVGPOST=0.7389;RSQ=0.2565;ERATE=0.0216;THETA=0.0005;AC=151;AN=2184 GT:DS:GL:BD 0.06913920 0
1 25328587 . CTCA C 1217 PASS INDEL;BAVGPOST=0.706;BRSQ=0.136;LDAF=0.2502;AVGPOST=0.7210;RSQ=0.3850;ERATE=0.0229;THETA=0.0006;AC=345;AN=2184 GT:DS:GL:BD 0.15796703 0
1 25328610 . CTCA C 562 PASS INDEL;BAVGPOST=0.871;BRSQ=0.167;LDAF=0.1529;AVGPOST=0.7931;RSQ=0.3601;ERATE=0.0110;THETA=0.0009;AC=192;AN=2184 GT:DS:GL:BD 0.08791209 0
1 25328612 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.602;BRSQ=0.208;LDAF=0.4076;AVGPOST=0.6679;RSQ=0.4120;ERATE=0.0434;THETA=0.0011;AC=740;AN=2184 GT:DS:GL:BD 0.33882785 0
1 25328637 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.646;BRSQ=0.341;LDAF=0.4360;AVGPOST=0.6765;RSQ=0.4336;ERATE=0.0494;THETA=0.0016;AC=832;AN=2184 GT:DS:GL:BD 0.38095239 0
1 25328674 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.957;BRSQ=0.603;LDAF=0.0783;AVGPOST=0.9308;RSQ=0.6321;ERATE=0.0031;THETA=0.0005;AC=126;AN=2184 GT:DS:GL:BD 0.05769231 0
1 25328681 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.324;LDAF=0.0157;AVGPOST=0.9769;RSQ=0.4108;ERATE=0.0016;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 25328683 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.897;BRSQ=0.188;LDAF=0.1138;AVGPOST=0.8423;RSQ=0.3804;ERATE=0.0087;THETA=0.0003;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 25328704 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.960;BRSQ=0.625;LDAF=0.0536;AVGPOST=0.9702;RSQ=0.7759;ERATE=0.0016;THETA=0.0006;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 25328711 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.439;LDAF=0.0140;AVGPOST=0.9872;RSQ=0.6003;ERATE=0.0013;THETA=0.0007;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 25328713 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.372;LDAF=0.0275;AVGPOST=0.9562;RSQ=0.3620;ERATE=0.0028;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 25328718 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.744;BRSQ=0.534;LDAF=0.4020;AVGPOST=0.8591;RSQ=0.7899;ERATE=0.0063;THETA=0.0009;AC=899;AN=2184 GT:DS:GL:BD 0.41163003 0
1 25328719 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.509;LDAF=0.0225;AVGPOST=0.9858;RSQ=0.7550;ERATE=0.0007;THETA=0.0012;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 25328724 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.750;LDAF=0.0311;AVGPOST=0.9738;RSQ=0.6816;ERATE=0.0024;THETA=0.0004;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 25328728 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.343;LDAF=0.0112;AVGPOST=0.9843;RSQ=0.4170;ERATE=0.0018;THETA=0.0011;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 25328731 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.909;BRSQ=0.735;LDAF=0.8488;AVGPOST=0.9154;RSQ=0.7875;ERATE=0.0041;THETA=0.0004;AC=1910;AN=2184 GT:DS:GL:BD 0.87454212 1
1 25328734 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.960;BRSQ=0.639;LDAF=0.0549;AVGPOST=0.9831;RSQ=0.8819;ERATE=0.0010;THETA=0.0009;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 25328743 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.936;BRSQ=0.853;LDAF=0.1727;AVGPOST=0.9347;RSQ=0.8432;ERATE=0.0013;THETA=0.0013;AC=353;AN=2184 GT:DS:GL:BD 0.16163003 0
1 25328749 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.434;LDAF=0.0315;AVGPOST=0.9794;RSQ=0.7393;ERATE=0.0017;THETA=0.0005;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 25328754 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.782;BRSQ=0.610;LDAF=0.6105;AVGPOST=0.7407;RSQ=0.5914;ERATE=0.0108;THETA=0.0005;AC=1410;AN=2184 GT:DS:GL:BD 0.64560437 1
1 25328764 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.937;BRSQ=0.494;LDAF=0.0907;AVGPOST=0.9206;RSQ=0.6306;ERATE=0.0046;THETA=0.0006;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 25328778 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.643;BRSQ=0.320;LDAF=0.3645;AVGPOST=0.8133;RSQ=0.7208;ERATE=0.0034;THETA=0.0005;AC=835;AN=2184 GT:DS:GL:BD 0.38232601 0
1 25328784 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.774;BRSQ=0.619;LDAF=0.5985;AVGPOST=0.7739;RSQ=0.6733;ERATE=0.0060;THETA=0.0007;AC=1395;AN=2184 GT:DS:GL:BD 0.63873625 1
1 25328791 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.768;BRSQ=0.605;LDAF=0.6389;AVGPOST=0.8208;RSQ=0.7412;ERATE=0.0026;THETA=0.0016;AC=1484;AN=2184 GT:DS:GL:BD 0.67948717 1
1 25328803 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.878;BRSQ=0.698;LDAF=0.2117;AVGPOST=0.8675;RSQ=0.7205;ERATE=0.0045;THETA=0.0007;AC=398;AN=2184 GT:DS:GL:BD 0.18223444 0
1 25328928 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.531;BRSQ=0.061;LDAF=0.3376;AVGPOST=0.7583;RSQ=0.6150;ERATE=0.0055;THETA=0.0003;AC=722;AN=2184 GT:DS:GL:BD 0.33058608 0
1 25328934 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.567;BRSQ=0.332;LDAF=0.5164;AVGPOST=0.7156;RSQ=0.6005;ERATE=0.0071;THETA=0.0007;AC=1163;AN=2184 GT:DS:GL:BD 0.53250915 1
1 25328941 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.606;BRSQ=0.400;LDAF=0.5457;AVGPOST=0.7034;RSQ=0.5584;ERATE=0.0162;THETA=0.0041;AC=1271;AN=2184 GT:DS:GL:BD 0.58195972 1
1 25328964 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.760;BRSQ=0.622;LDAF=0.6129;AVGPOST=0.8097;RSQ=0.7288;ERATE=0.0051;THETA=0.0012;AC=1408;AN=2184 GT:DS:GL:BD 0.64468867 1
1 25328971 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.776;BRSQ=0.646;LDAF=0.6245;AVGPOST=0.8222;RSQ=0.7470;ERATE=0.0052;THETA=0.0009;AC=1442;AN=2184 GT:DS:GL:BD 0.66025639 1
1 25328989 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.404;LDAF=0.0334;AVGPOST=0.9760;RSQ=0.7106;ERATE=0.0010;THETA=0.0010;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 25328994 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.810;BRSQ=0.613;LDAF=0.7453;AVGPOST=0.8348;RSQ=0.7061;ERATE=0.0082;THETA=0.0003;AC=1698;AN=2184 GT:DS:GL:BD 0.77747256 1
1 25329015 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.850;BRSQ=0.752;LDAF=0.6534;AVGPOST=0.8651;RSQ=0.8038;ERATE=0.0027;THETA=0.0032;AC=1497;AN=2184 GT:DS:GL:BD 0.68543959 1
1 25329024 rs71709004 CAT C 8520 PASS INDEL;BAVGPOST=0.950;BRSQ=0.904;LDAF=0.1525;AVGPOST=0.9701;RSQ=0.9184;ERATE=0.0009;THETA=0.0006;AC=316;AN=2184 GT:DS:GL:BD 0.14468865 0
1 25329086 rs35541919 GATA G 18137 PASS INDEL;BAVGPOST=0.871;BRSQ=0.804;LDAF=0.4615;AVGPOST=0.9150;RSQ=0.8819;ERATE=0.0027;THETA=0.0006;AC=1022;AN=2184 GT:DS:GL:BD 0.46794870 0
1 25329091 . TAAC T 5781 PASS INDEL;BAVGPOST=0.867;BRSQ=0.796;LDAF=0.4453;AVGPOST=0.8923;RSQ=0.8472;ERATE=0.0059;THETA=0.0019;AC=1000;AN=2184 GT:DS:GL:BD 0.45787546 0
1 25329094 . CATAT C 270 PASS INDEL;BAVGPOST=0.979;BRSQ=0.819;LDAF=0.0668;AVGPOST=0.9519;RSQ=0.7131;ERATE=0.0023;THETA=0.0048;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 25329095 . ATATAT A 1760 PASS INDEL;BAVGPOST=0.979;BRSQ=0.810;LDAF=0.0551;AVGPOST=0.9818;RSQ=0.8772;ERATE=0.0009;THETA=0.0004;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 25329200 . ATATAT A 307 PASS INDEL;BAVGPOST=0.996;BRSQ=0.723;LDAF=0.0149;AVGPOST=0.9899;RSQ=0.7178;ERATE=0.0008;THETA=0.0008;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 25329310 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0038;AVGPOST=0.9959;RSQ=0.6241;ERATE=0.0009;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25329378 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7641;ERATE=0.0005;THETA=0.0037;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25329409 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8996;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25329509 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0037;AVGPOST=0.9958;RSQ=0.5874;ERATE=0.0004;THETA=0.0036;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25329547 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.951;LDAF=0.0190;AVGPOST=0.9966;RSQ=0.9412;ERATE=0.0006;THETA=0.0009;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 25329575 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0050;AVGPOST=0.9976;RSQ=0.8111;ERATE=0.0004;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25329607 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8136;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25329608 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.7105;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25329627 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0042;AVGPOST=0.9990;RSQ=0.9120;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25329677 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0047;AVGPOST=0.9991;RSQ=0.9368;ERATE=0.0003;THETA=0.0011;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25329705 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8871;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25329722 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9126;AVGPOST=0.9998;RSQ=0.9990;ERATE=0.0003;THETA=0.0004;AC=1993;AN=2184 GT:DS:GL:BD 0.91254580 1
1 25329752 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1833;AVGPOST=0.9974;RSQ=0.9942;ERATE=0.0004;THETA=0.0005;AC=401;AN=2184 GT:DS:GL:BD 0.18360806 0
1 25329759 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25329778 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7654;AVGPOST=0.9994;RSQ=0.9983;ERATE=0.0004;THETA=0.0003;AC=1671;AN=2184 GT:DS:GL:BD 0.76510990 1
1 25329819 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0175;AVGPOST=0.9995;RSQ=0.9875;ERATE=0.0003;THETA=0.0006;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 25329835 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6169;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25329922 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25329983 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1334;AVGPOST=0.9992;RSQ=0.9972;ERATE=0.0004;THETA=0.0006;AC=292;AN=2184 GT:DS:GL:BD 0.13369964 0
1 25329991 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.9125;AVGPOST=0.9977;RSQ=0.9890;ERATE=0.0005;THETA=0.0003;AC=1994;AN=2184 GT:DS:GL:BD 0.91300368 1
1 25330109 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9443;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25330155 . CAG C 97 PASS INDEL;BAVGPOST=0.998;BRSQ=0.753;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.6238;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25330358 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25330373 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25330459 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1305;AVGPOST=0.9988;RSQ=0.9966;ERATE=0.0003;THETA=0.0015;AC=285;AN=2184 GT:DS:GL:BD 0.13049451 0
1 25330593 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0083;AVGPOST=0.9969;RSQ=0.8748;ERATE=0.0004;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 25330684 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.803;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.7322;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25330801 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7195;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25330894 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9495;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25330949 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25330953 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0025;AVGPOST=0.9982;RSQ=0.7021;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25330954 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7650;AVGPOST=0.9984;RSQ=0.9960;ERATE=0.0006;THETA=0.0003;AC=1671;AN=2184 GT:DS:GL:BD 0.76510990 1
1 25330994 . A AAG 16100 PASS INDEL;BAVGPOST=0.952;BRSQ=0.912;LDAF=0.4439;AVGPOST=0.9372;RSQ=0.9101;ERATE=0.0127;THETA=0.0006;AC=987;AN=2184 GT:DS:GL:BD 0.45192307 0
1 25331065 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.627;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6395;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25331104 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0006;AVGPOST=0.9989;RSQ=0.3081;ERATE=0.0004;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 25331172 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.627;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7689;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25331277 . A AC 140 PASS INDEL;BAVGPOST=0.999;BRSQ=0.744;LDAF=0.0048;AVGPOST=0.9968;RSQ=0.7165;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25331392 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1325;AVGPOST=0.9998;RSQ=0.9991;ERATE=0.0003;THETA=0.0001;AC=290;AN=2184 GT:DS:GL:BD 0.13278389 0
1 25331399 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5969;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25331411 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7653;AVGPOST=0.9993;RSQ=0.9982;ERATE=0.0004;THETA=0.0002;AC=1671;AN=2184 GT:DS:GL:BD 0.76510990 1
1 25331424 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6547;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25331468 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8978;AVGPOST=0.9994;RSQ=0.9972;ERATE=0.0003;THETA=0.0003;AC=1961;AN=2184 GT:DS:GL:BD 0.89789379 1
1 25331585 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4346;AVGPOST=0.9988;RSQ=0.9983;ERATE=0.0004;THETA=0.0003;AC=951;AN=2184 GT:DS:GL:BD 0.43543956 0
1 25331752 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0167;AVGPOST=0.9992;RSQ=0.9848;ERATE=0.0003;THETA=0.0002;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 25331793 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2072;AVGPOST=0.9996;RSQ=0.9989;ERATE=0.0004;THETA=0.0005;AC=453;AN=2184 GT:DS:GL:BD 0.20741758 0
1 25331848 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4339;AVGPOST=0.9990;RSQ=0.9985;ERATE=0.0004;THETA=0.0011;AC=949;AN=2184 GT:DS:GL:BD 0.43452382 0
1 25331872 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.4346;AVGPOST=0.9973;RSQ=0.9960;ERATE=0.0006;THETA=0.0005;AC=949;AN=2184 GT:DS:GL:BD 0.43452382 0
1 25331908 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.5325;ERATE=0.0006;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25331919 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4297;AVGPOST=0.9977;RSQ=0.9967;ERATE=0.0006;THETA=0.0006;AC=937;AN=2184 GT:DS:GL:BD 0.42902932 0
1 25331941 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8326;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25331985 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0071;AVGPOST=0.9994;RSQ=0.9698;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 25332002 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0147;AVGPOST=0.9999;RSQ=0.9974;ERATE=0.0003;THETA=0.0009;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 25332072 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8315;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25332197 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1364;AVGPOST=0.9994;RSQ=0.9978;ERATE=0.0005;THETA=0.0004;AC=298;AN=2184 GT:DS:GL:BD 0.13644689 0
1 25332253 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.4303;AVGPOST=0.9982;RSQ=0.9974;ERATE=0.0004;THETA=0.0008;AC=937;AN=2184 GT:DS:GL:BD 0.42902932 0
1 25332288 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0022;AVGPOST=0.9996;RSQ=0.9272;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25332437 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6066;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25332447 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.7825;ERATE=0.0006;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25332520 . C CT 13379 PASS INDEL;BAVGPOST=0.984;BRSQ=0.956;LDAF=0.2188;AVGPOST=0.9694;RSQ=0.9313;ERATE=0.0102;THETA=0.0002;AC=465;AN=2184 GT:DS:GL:BD 0.21291208 0
1 25332562 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.8040;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25332692 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7186;ERATE=0.0003;THETA=0.0034;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25332830 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.732;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4020;ERATE=0.0007;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25332979 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.714;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5729;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25333062 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2237;AVGPOST=0.9987;RSQ=0.9972;ERATE=0.0004;THETA=0.0006;AC=490;AN=2184 GT:DS:GL:BD 0.22435898 0
1 25333121 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2135;AVGPOST=0.9987;RSQ=0.9968;ERATE=0.0005;THETA=0.0003;AC=467;AN=2184 GT:DS:GL:BD 0.21382783 0
1 25333123 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25333134 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.916;LDAF=0.0379;AVGPOST=0.9937;RSQ=0.9321;ERATE=0.0004;THETA=0.0004;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 25333194 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.845;LDAF=0.0030;AVGPOST=0.9981;RSQ=0.7630;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25333231 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25333264 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1360;AVGPOST=0.9990;RSQ=0.9965;ERATE=0.0003;THETA=0.0003;AC=297;AN=2184 GT:DS:GL:BD 0.13598901 0
1 25333302 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0040;AVGPOST=0.9983;RSQ=0.8135;ERATE=0.0004;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25333386 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0017;AVGPOST=0.9977;RSQ=0.4671;ERATE=0.0005;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25333416 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1734;AVGPOST=0.9995;RSQ=0.9984;ERATE=0.0003;THETA=0.0007;AC=379;AN=2184 GT:DS:GL:BD 0.17353480 0
1 25333429 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1326;AVGPOST=0.9989;RSQ=0.9966;ERATE=0.0003;THETA=0.0014;AC=289;AN=2184 GT:DS:GL:BD 0.13232601 0
1 25333616 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0261;AVGPOST=0.9998;RSQ=0.9963;ERATE=0.0003;THETA=0.0004;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 25333654 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7030;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25333785 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.987;LDAF=0.1747;AVGPOST=0.9940;RSQ=0.9861;ERATE=0.0013;THETA=0.0004;AC=382;AN=2184 GT:DS:GL:BD 0.17490843 0
1 25333791 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3722;AVGPOST=0.9987;RSQ=0.9980;ERATE=0.0005;THETA=0.0003;AC=815;AN=2184 GT:DS:GL:BD 0.37316850 0
1 25333899 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3734;AVGPOST=0.9995;RSQ=0.9992;ERATE=0.0004;THETA=0.0002;AC=817;AN=2184 GT:DS:GL:BD 0.37408423 0
1 25333900 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.909;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9252;ERATE=0.0003;THETA=0.0031;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25333913 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6817;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25333955 . C CT 11916 PASS INDEL;BAVGPOST=0.986;BRSQ=0.966;LDAF=0.2214;AVGPOST=0.9801;RSQ=0.9578;ERATE=0.0052;THETA=0.0006;AC=477;AN=2184 GT:DS:GL:BD 0.21840659 0
1 25334058 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7265;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25334092 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0068;AVGPOST=0.9993;RSQ=0.9637;ERATE=0.0003;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 25334096 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4610;ERATE=0.0007;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25334113 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.4304;AVGPOST=0.9978;RSQ=0.9971;ERATE=0.0005;THETA=0.0004;AC=942;AN=2184 GT:DS:GL:BD 0.43131867 0
1 25334121 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0180;AVGPOST=0.9984;RSQ=0.9640;ERATE=0.0005;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 25334158 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0018;AVGPOST=0.9988;RSQ=0.6976;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25334164 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.775;LDAF=0.0030;AVGPOST=0.9984;RSQ=0.7807;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25334267 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0040;AVGPOST=0.9977;RSQ=0.7859;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25334268 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.734;LDAF=0.0177;AVGPOST=0.9843;RSQ=0.6771;ERATE=0.0048;THETA=0.0009;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 25334338 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6252;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25334360 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0082;AVGPOST=0.9958;RSQ=0.8000;ERATE=0.0006;THETA=0.0001;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 25334405 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.722;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0005;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25334462 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.682;LDAF=0.0062;AVGPOST=0.9958;RSQ=0.7191;ERATE=0.0004;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25334503 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0146;AVGPOST=0.9990;RSQ=0.9713;ERATE=0.0004;THETA=0.0007;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 25334619 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.5494;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25334786 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.923;LDAF=0.0154;AVGPOST=0.9966;RSQ=0.9196;ERATE=0.0004;THETA=0.0008;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 25335064 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.4089;AVGPOST=0.9956;RSQ=0.9935;ERATE=0.0009;THETA=0.0004;AC=895;AN=2184 GT:DS:GL:BD 0.40979853 0
1 25335097 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0055;AVGPOST=0.9989;RSQ=0.9225;ERATE=0.0004;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 25335146 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5423;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25335150 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8258;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25335222 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2743;AVGPOST=0.9979;RSQ=0.9962;ERATE=0.0006;THETA=0.0054;AC=600;AN=2184 GT:DS:GL:BD 0.27472529 0
1 25335234 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0038;AVGPOST=0.9983;RSQ=0.8410;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25335434 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.731;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4696;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25335435 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25335556 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.528;LDAF=0.0023;AVGPOST=0.9976;RSQ=0.6276;ERATE=0.0005;THETA=0.0061;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25335557 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0282;AVGPOST=0.9990;RSQ=0.9866;ERATE=0.0003;THETA=0.0005;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 25335626 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.722;LDAF=0.0031;AVGPOST=0.9956;RSQ=0.4436;ERATE=0.0005;THETA=0.0014;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25335689 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9989;RSQ=0.9454;ERATE=0.0005;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 25335772 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.0082;AVGPOST=0.9980;RSQ=0.9012;ERATE=0.0005;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 25335881 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0337;AVGPOST=0.9979;RSQ=0.9762;ERATE=0.0005;THETA=0.0019;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 25335984 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.687;LDAF=0.0030;AVGPOST=0.9989;RSQ=0.8294;ERATE=0.0005;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25336156 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0027;AVGPOST=0.9977;RSQ=0.6507;ERATE=0.0006;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25336216 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0196;AVGPOST=0.9974;RSQ=0.9567;ERATE=0.0009;THETA=0.0006;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 25336224 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.728;LDAF=0.0027;AVGPOST=0.9970;RSQ=0.5839;ERATE=0.0018;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25336252 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0226;AVGPOST=0.9979;RSQ=0.9697;ERATE=0.0004;THETA=0.0008;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 25336321 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0215;AVGPOST=0.9997;RSQ=0.9941;ERATE=0.0003;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 25336353 . AG A 52 PASS INDEL;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6288;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25336421 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0135;AVGPOST=0.9995;RSQ=0.9807;ERATE=0.0003;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 25336441 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.5930;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25336626 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0324;AVGPOST=0.9998;RSQ=0.9974;ERATE=0.0003;THETA=0.0006;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 25336650 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8591;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25336654 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2769;AVGPOST=0.9980;RSQ=0.9963;ERATE=0.0004;THETA=0.0003;AC=607;AN=2184 GT:DS:GL:BD 0.27793041 0
1 25336693 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25336841 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0285;AVGPOST=0.9997;RSQ=0.9955;ERATE=0.0004;THETA=0.0005;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 25336859 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25336878 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0287;AVGPOST=0.9994;RSQ=0.9910;ERATE=0.0004;THETA=0.0003;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 25336903 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6489;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25336986 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0283;AVGPOST=1.0000;RSQ=0.9992;ERATE=0.0003;THETA=0.0003;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 25337079 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6018;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25337229 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25337301 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0070;AVGPOST=0.9996;RSQ=0.9749;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 25337342 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.846;LDAF=0.0218;AVGPOST=0.9899;RSQ=0.8230;ERATE=0.0005;THETA=0.0002;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 25337363 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4839;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25337386 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0017;AVGPOST=0.9987;RSQ=0.6769;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25337426 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2086;AVGPOST=0.9993;RSQ=0.9982;ERATE=0.0005;THETA=0.0003;AC=456;AN=2184 GT:DS:GL:BD 0.20879121 0
1 25337458 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.797;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7136;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25337587 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2758;AVGPOST=0.9985;RSQ=0.9975;ERATE=0.0004;THETA=0.0005;AC=602;AN=2184 GT:DS:GL:BD 0.27564102 0
1 25337611 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6298;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25337616 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0104;AVGPOST=0.9993;RSQ=0.9689;ERATE=0.0004;THETA=0.0007;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 25337657 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0045;AVGPOST=0.9972;RSQ=0.7584;ERATE=0.0005;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25337785 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0084;AVGPOST=0.9997;RSQ=0.9842;ERATE=0.0004;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 25337896 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2470;AVGPOST=0.9995;RSQ=0.9988;ERATE=0.0004;THETA=0.0005;AC=540;AN=2184 GT:DS:GL:BD 0.24725275 0
1 25337938 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2490;AVGPOST=0.9971;RSQ=0.9943;ERATE=0.0005;THETA=0.0003;AC=545;AN=2184 GT:DS:GL:BD 0.24954212 0
1 25337983 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.6033;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25338032 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1310;AVGPOST=0.9995;RSQ=0.9978;ERATE=0.0003;THETA=0.0004;AC=287;AN=2184 GT:DS:GL:BD 0.13141026 0
1 25338048 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0017;AVGPOST=0.9981;RSQ=0.5628;ERATE=0.0007;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25338096 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7608;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25338116 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.9073;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25338188 . TGAA T 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.741;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5253;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25338204 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.810;LDAF=0.0064;AVGPOST=0.9974;RSQ=0.8524;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 25338227 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8782;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25338267 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0293;AVGPOST=0.9993;RSQ=0.9904;ERATE=0.0003;THETA=0.0003;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 25338370 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0078;AVGPOST=0.9998;RSQ=0.9874;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 25338668 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.797;LDAF=0.0038;AVGPOST=0.9979;RSQ=0.7707;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25338798 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25338799 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.4064;AVGPOST=0.9972;RSQ=0.9959;ERATE=0.0007;THETA=0.0006;AC=889;AN=2184 GT:DS:GL:BD 0.40705130 0
1 25338860 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25338879 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.609;LDAF=0.0042;AVGPOST=0.9951;RSQ=0.5401;ERATE=0.0008;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25338936 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.7076;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25338975 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.665;LDAF=0.0033;AVGPOST=0.9970;RSQ=0.6646;ERATE=0.0007;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25338988 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0085;AVGPOST=0.9983;RSQ=0.9220;ERATE=0.0004;THETA=0.0012;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 25339099 . G GT 1208 PASS INDEL;BAVGPOST=0.998;BRSQ=0.930;LDAF=0.0106;AVGPOST=0.9956;RSQ=0.8520;ERATE=0.0005;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 25339220 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4065;AVGPOST=0.9990;RSQ=0.9984;ERATE=0.0004;THETA=0.0018;AC=890;AN=2184 GT:DS:GL:BD 0.40750915 0
1 25339236 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0084;AVGPOST=0.9985;RSQ=0.9312;ERATE=0.0004;THETA=0.0012;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 25339249 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0026;AVGPOST=0.9991;RSQ=0.8403;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25339359 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4692;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25339392 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.720;LDAF=0.0038;AVGPOST=0.9953;RSQ=0.5271;ERATE=0.0006;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25339421 rs60088739 A AG 88023 PASS INDEL;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.9107;AVGPOST=0.9924;RSQ=0.9636;ERATE=0.0007;THETA=0.0003;AC=1989;AN=2184 GT:DS:GL:BD 0.91071427 1
1 25339542 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.1701;AVGPOST=0.9978;RSQ=0.9939;ERATE=0.0004;THETA=0.0008;AC=371;AN=2184 GT:DS:GL:BD 0.16987179 0
1 25339543 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.908;LDAF=0.0213;AVGPOST=0.9953;RSQ=0.9062;ERATE=0.0006;THETA=0.0004;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 25339593 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.821;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8085;ERATE=0.0009;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25339654 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5542;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25339779 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2772;AVGPOST=0.9984;RSQ=0.9969;ERATE=0.0004;THETA=0.0006;AC=607;AN=2184 GT:DS:GL:BD 0.27793041 0
1 25339890 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.649;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25340038 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0083;AVGPOST=0.9999;RSQ=0.9920;ERATE=0.0003;THETA=0.0009;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 25340145 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9058;ERATE=0.0003;THETA=0.0035;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25340263 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5492;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25340276 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0004;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25340330 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.4323;AVGPOST=0.9936;RSQ=0.9913;ERATE=0.0005;THETA=0.0005;AC=945;AN=2184 GT:DS:GL:BD 0.43269232 0
1 25340334 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8593;ERATE=0.0003;THETA=0.0031;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25340345 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.821;LDAF=0.0055;AVGPOST=0.9989;RSQ=0.9079;ERATE=0.0004;THETA=0.0096;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25340388 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0284;AVGPOST=0.9990;RSQ=0.9847;ERATE=0.0005;THETA=0.0050;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 25340547 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0061;AVGPOST=0.9978;RSQ=0.8696;ERATE=0.0004;THETA=0.0011;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25340651 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0064;AVGPOST=0.9991;RSQ=0.9348;ERATE=0.0003;THETA=0.0012;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 25340669 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.712;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7102;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25340805 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.7879;ERATE=0.0003;THETA=0.0058;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25340824 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.760;LDAF=0.0037;AVGPOST=0.9959;RSQ=0.5478;ERATE=0.0003;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25340854 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0045;AVGPOST=0.9982;RSQ=0.8532;ERATE=0.0005;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25340885 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0079;AVGPOST=0.9986;RSQ=0.9315;ERATE=0.0004;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 25340935 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.867;LDAF=0.0025;AVGPOST=0.9994;RSQ=0.8800;ERATE=0.0004;THETA=0.0084;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25340978 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0027;AVGPOST=0.9989;RSQ=0.8366;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25341059 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0057;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25341060 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25341092 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25341110 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.867;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.8075;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25341148 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7907;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25341218 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6468;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25341227 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7575;ERATE=0.0004;THETA=0.0039;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25341299 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0030;AVGPOST=0.9985;RSQ=0.7893;ERATE=0.0005;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25341333 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0092;AVGPOST=0.9977;RSQ=0.9184;ERATE=0.0003;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 25341587 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.614;LDAF=0.0028;AVGPOST=0.9974;RSQ=0.5862;ERATE=0.0008;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25341750 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.3987;AVGPOST=0.9958;RSQ=0.9943;ERATE=0.0006;THETA=0.0006;AC=873;AN=2184 GT:DS:GL:BD 0.39972529 0
1 25341896 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5002;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25342187 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0042;AVGPOST=0.9984;RSQ=0.8487;ERATE=0.0004;THETA=0.0011;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25342256 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1467;AVGPOST=0.9979;RSQ=0.9934;ERATE=0.0004;THETA=0.0008;AC=319;AN=2184 GT:DS:GL:BD 0.14606227 0
1 25342279 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0416;AVGPOST=0.9988;RSQ=0.9893;ERATE=0.0003;THETA=0.0010;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 25342334 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.717;LDAF=0.0021;AVGPOST=0.9981;RSQ=0.6285;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25342407 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25342453 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0074;AVGPOST=0.9989;RSQ=0.9410;ERATE=0.0004;THETA=0.0008;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 25342567 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.981;LDAF=0.1499;AVGPOST=0.9945;RSQ=0.9828;ERATE=0.0004;THETA=0.0003;AC=326;AN=2184 GT:DS:GL:BD 0.14926741 0
1 25342628 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.5523;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25342629 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0427;AVGPOST=0.9995;RSQ=0.9951;ERATE=0.0003;THETA=0.0003;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 25342654 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.9107;AVGPOST=0.9957;RSQ=0.9784;ERATE=0.0005;THETA=0.0004;AC=1992;AN=2184 GT:DS:GL:BD 0.91208792 1
1 25342739 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.544;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6733;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25342813 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4946;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25342863 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0234;AVGPOST=0.9995;RSQ=0.9906;ERATE=0.0004;THETA=0.0003;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 25342954 rs67306613 C CA 1478 PASS INDEL;BAVGPOST=0.565;BRSQ=0.243;LDAF=0.4576;AVGPOST=0.6720;RSQ=0.4215;ERATE=0.0290;THETA=0.0005;AC=945;AN=2184 GT:DS:GL:BD 0.43269232 0
1 25342988 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0008;AVGPOST=0.9989;RSQ=0.3885;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25343040 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8910;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25343096 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0426;AVGPOST=0.9997;RSQ=0.9965;ERATE=0.0003;THETA=0.0004;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 25343160 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0066;AVGPOST=0.9995;RSQ=0.9605;ERATE=0.0004;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 25343196 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.778;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.4824;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25343419 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1482;AVGPOST=0.9973;RSQ=0.9922;ERATE=0.0005;THETA=0.0004;AC=322;AN=2184 GT:DS:GL:BD 0.14743590 0
1 25343446 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0453;AVGPOST=0.9923;RSQ=0.9263;ERATE=0.0005;THETA=0.0005;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 25343495 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4082;AVGPOST=0.9961;RSQ=0.9946;ERATE=0.0007;THETA=0.0002;AC=893;AN=2184 GT:DS:GL:BD 0.40888280 0
1 25343544 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4116;AVGPOST=0.9989;RSQ=0.9984;ERATE=0.0005;THETA=0.0005;AC=901;AN=2184 GT:DS:GL:BD 0.41254580 0
1 25343682 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0068;AVGPOST=0.9992;RSQ=0.9503;ERATE=0.0004;THETA=0.0032;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 25343917 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7967;ERATE=0.0004;THETA=0.0028;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25344070 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4129;AVGPOST=0.9989;RSQ=0.9984;ERATE=0.0004;THETA=0.0002;AC=904;AN=2184 GT:DS:GL:BD 0.41391942 0
1 25344111 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25344122 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4125;AVGPOST=0.9979;RSQ=0.9975;ERATE=0.0004;THETA=0.0003;AC=903;AN=2184 GT:DS:GL:BD 0.41346154 0
1 25344155 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4114;AVGPOST=0.9966;RSQ=0.9961;ERATE=0.0005;THETA=0.0002;AC=900;AN=2184 GT:DS:GL:BD 0.41208792 0
1 25344157 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5763;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25344196 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.4035;AVGPOST=0.9941;RSQ=0.9923;ERATE=0.0014;THETA=0.0009;AC=886;AN=2184 GT:DS:GL:BD 0.40567765 0
1 25344265 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.4057;AVGPOST=0.9988;RSQ=0.9982;ERATE=0.0006;THETA=0.0005;AC=888;AN=2184 GT:DS:GL:BD 0.40659341 0
1 25344343 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0028;AVGPOST=0.9987;RSQ=0.7956;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25344390 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25344451 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.897;LDAF=0.0192;AVGPOST=0.9960;RSQ=0.9150;ERATE=0.0004;THETA=0.0004;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 25344457 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0036;AVGPOST=0.9982;RSQ=0.7779;ERATE=0.0030;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25344494 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.981;LDAF=0.1832;AVGPOST=0.9941;RSQ=0.9841;ERATE=0.0004;THETA=0.0003;AC=397;AN=2184 GT:DS:GL:BD 0.18177655 0
1 25344585 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25344608 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9525;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25344674 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0075;AVGPOST=0.9989;RSQ=0.9496;ERATE=0.0004;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 25344741 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0025;AVGPOST=0.9991;RSQ=0.8437;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25344816 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0073;AVGPOST=0.9993;RSQ=0.9685;ERATE=0.0003;THETA=0.0011;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 25344868 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.808;LDAF=0.0022;AVGPOST=0.9986;RSQ=0.7332;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25344983 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0004;THETA=0.0025;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25345010 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4070;AVGPOST=0.9983;RSQ=0.9977;ERATE=0.0004;THETA=0.0024;AC=891;AN=2184 GT:DS:GL:BD 0.40796703 0
1 25345015 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8745;ERATE=0.0004;THETA=0.0042;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25345221 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0047;AVGPOST=0.9987;RSQ=0.8765;ERATE=0.0005;THETA=0.0082;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25345543 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1473;AVGPOST=0.9979;RSQ=0.9945;ERATE=0.0004;THETA=0.0016;AC=321;AN=2184 GT:DS:GL:BD 0.14697802 0
1 25345623 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.950;LDAF=0.0129;AVGPOST=0.9977;RSQ=0.9294;ERATE=0.0006;THETA=0.0086;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 25345654 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.0035;AVGPOST=0.9989;RSQ=0.8665;ERATE=0.0007;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25345679 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0004;THETA=0.0086;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25345911 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8938;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25345954 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.985;LDAF=0.2494;AVGPOST=0.9892;RSQ=0.9810;ERATE=0.0012;THETA=0.0038;AC=542;AN=2184 GT:DS:GL:BD 0.24816850 0
1 25345966 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.844;LDAF=0.0055;AVGPOST=0.9962;RSQ=0.7224;ERATE=0.0009;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25345990 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0016;AVGPOST=0.9988;RSQ=0.6784;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25346088 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8193;ERATE=0.0004;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25346235 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.843;LDAF=0.0062;AVGPOST=0.9970;RSQ=0.8124;ERATE=0.0007;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 25346244 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0033;AVGPOST=0.9988;RSQ=0.8351;ERATE=0.0004;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25346274 . GCA G 147 PASS INDEL;BAVGPOST=0.990;BRSQ=0.672;LDAF=0.0291;AVGPOST=0.9681;RSQ=0.5512;ERATE=0.0115;THETA=0.0006;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 25346308 . GCA G 237 PASS INDEL;BAVGPOST=0.988;BRSQ=0.664;LDAF=0.0264;AVGPOST=0.9725;RSQ=0.5646;ERATE=0.0108;THETA=0.0036;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 25346344 . CCA C 873 PASS INDEL;BAVGPOST=0.991;BRSQ=0.745;LDAF=0.0263;AVGPOST=0.9765;RSQ=0.6302;ERATE=0.0079;THETA=0.0005;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 25346405 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9999;AVGPOST=0.9997;RSQ=0.0497;ERATE=0.0003;THETA=0.0006;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 25346407 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8138;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25346425 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9998;AVGPOST=0.9995;RSQ=0.0496;ERATE=0.0004;THETA=0.0009;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 25346453 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.430;LDAF=0.0098;AVGPOST=0.9872;RSQ=0.5362;ERATE=0.0040;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25346454 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.570;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5095;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25346455 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.874;LDAF=0.0079;AVGPOST=0.9957;RSQ=0.7903;ERATE=0.0015;THETA=0.0025;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 25346494 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.862;LDAF=0.0486;AVGPOST=0.9772;RSQ=0.8168;ERATE=0.0098;THETA=0.0007;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 25346544 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25346633 . TAC T 79 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25346669 . CACAT C 177 PASS INDEL;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8539;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25346739 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25346815 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0182;AVGPOST=0.9990;RSQ=0.9787;ERATE=0.0003;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 25346835 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0086;AVGPOST=0.9991;RSQ=0.9590;ERATE=0.0003;THETA=0.0013;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 25346860 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25346916 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0028;AVGPOST=0.9997;RSQ=0.9456;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25347227 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0049;AVGPOST=0.9963;RSQ=0.7143;ERATE=0.0004;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25347401 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.754;LDAF=0.0020;AVGPOST=0.9976;RSQ=0.5636;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25347577 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.1271;AVGPOST=0.9948;RSQ=0.9820;ERATE=0.0004;THETA=0.0010;AC=278;AN=2184 GT:DS:GL:BD 0.12728938 0
1 25347585 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8894;ERATE=0.0003;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25347711 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.986;LDAF=0.4604;AVGPOST=0.9837;RSQ=0.9792;ERATE=0.0007;THETA=0.0004;AC=1005;AN=2184 GT:DS:GL:BD 0.46016484 0
1 25347759 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0208;AVGPOST=0.9967;RSQ=0.9399;ERATE=0.0008;THETA=0.0024;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 25347846 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0066;AVGPOST=0.9994;RSQ=0.9580;ERATE=0.0004;THETA=0.0009;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 25347870 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.917;LDAF=0.0130;AVGPOST=0.9987;RSQ=0.9551;ERATE=0.0004;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 25347916 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.889;LDAF=0.0069;AVGPOST=0.9985;RSQ=0.9097;ERATE=0.0004;THETA=0.0019;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 25348126 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0032;AVGPOST=0.9992;RSQ=0.8972;ERATE=0.0004;THETA=0.0099;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25348157 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25348326 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0192;AVGPOST=0.9999;RSQ=0.9969;ERATE=0.0003;THETA=0.0032;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 25348515 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8288;ERATE=0.0005;THETA=0.0035;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25348657 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.938;LDAF=0.1609;AVGPOST=0.9697;RSQ=0.9179;ERATE=0.0053;THETA=0.0006;AC=343;AN=2184 GT:DS:GL:BD 0.15705128 0
1 25348948 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.880;LDAF=0.0099;AVGPOST=0.9941;RSQ=0.7565;ERATE=0.0007;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 25348948 . C CG 6056 PASS INDEL;BAVGPOST=0.925;BRSQ=0.888;LDAF=0.4446;AVGPOST=0.8758;RSQ=0.8327;ERATE=0.0084;THETA=0.0008;AC=960;AN=2184 GT:DS:GL:BD 0.43956044 0
1 25348950 rs71014329 G GT 14376 PASS INDEL;BAVGPOST=0.912;BRSQ=0.864;LDAF=0.4349;AVGPOST=0.9074;RSQ=0.8758;ERATE=0.0038;THETA=0.0082;AC=959;AN=2184 GT:DS:GL:BD 0.43910256 0
1 25348990 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0035;AVGPOST=0.9980;RSQ=0.7396;ERATE=0.0009;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25349110 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.714;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5059;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25349182 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0051;AVGPOST=0.9989;RSQ=0.8990;ERATE=0.0005;THETA=0.0014;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25349340 . TG T 22 PASS INDEL;BAVGPOST=1.000;BRSQ=0.661;LDAF=0.0058;AVGPOST=0.9918;RSQ=0.4507;ERATE=0.0011;THETA=0.0033;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25349394 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9375;ERATE=0.0004;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25349498 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0065;AVGPOST=0.9987;RSQ=0.9182;ERATE=0.0004;THETA=0.0012;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 25349562 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0033;AVGPOST=0.9995;RSQ=0.9231;ERATE=0.0003;THETA=0.0084;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25349614 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.873;LDAF=0.9852;AVGPOST=0.9937;RSQ=0.8374;ERATE=0.0004;THETA=0.0007;AC=2153;AN=2184 GT:DS:GL:BD 0.98580587 1
1 25349739 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5195;ERATE=0.0004;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25349946 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6209;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25350066 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.6094;ERATE=0.0003;THETA=0.0039;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25350120 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6701;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25350145 . ATAGT A 154 PASS INDEL;BAVGPOST=1.000;BRSQ=0.763;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0058;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25350186 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.3002;AVGPOST=0.9935;RSQ=0.9874;ERATE=0.0006;THETA=0.0007;AC=654;AN=2184 GT:DS:GL:BD 0.29945055 0
1 25350195 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0046;AVGPOST=0.9998;RSQ=0.9810;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25350291 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5620;ERATE=0.0004;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25350337 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9310;ERATE=0.0004;THETA=0.0017;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25350375 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5571;ERATE=0.0005;THETA=0.0045;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25350439 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.580;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.7986;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25350456 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0104;AVGPOST=0.9990;RSQ=0.9617;ERATE=0.0004;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 25350470 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.865;LDAF=0.0092;AVGPOST=0.9975;RSQ=0.9015;ERATE=0.0004;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 25350497 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1733;AVGPOST=0.9967;RSQ=0.9910;ERATE=0.0004;THETA=0.0024;AC=379;AN=2184 GT:DS:GL:BD 0.17353480 0
1 25350588 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1703;AVGPOST=0.9963;RSQ=0.9900;ERATE=0.0003;THETA=0.0010;AC=370;AN=2184 GT:DS:GL:BD 0.16941392 0
1 25350623 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.760;LDAF=0.0020;AVGPOST=0.9993;RSQ=0.8437;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25350701 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0039;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25350761 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7448;ERATE=0.0004;THETA=0.0034;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25350779 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.827;LDAF=0.0191;AVGPOST=0.9933;RSQ=0.8593;ERATE=0.0006;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 25350819 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7443;ERATE=0.0004;THETA=0.0032;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25350924 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25350950 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0102;AVGPOST=0.9996;RSQ=0.9808;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 25351088 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0106;AVGPOST=0.9986;RSQ=0.9391;ERATE=0.0005;THETA=0.0009;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 25351284 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0290;AVGPOST=0.9963;RSQ=0.9539;ERATE=0.0010;THETA=0.0003;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 25351380 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0068;AVGPOST=0.9991;RSQ=0.9425;ERATE=0.0004;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 25351401 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.832;LDAF=0.0021;AVGPOST=0.9988;RSQ=0.7489;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25351581 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.4924;AVGPOST=0.9899;RSQ=0.9851;ERATE=0.0016;THETA=0.0004;AC=1075;AN=2184 GT:DS:GL:BD 0.49221611 0
1 25351614 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0059;AVGPOST=0.9989;RSQ=0.9080;ERATE=0.0006;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 25351626 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0157;AVGPOST=0.9987;RSQ=0.9672;ERATE=0.0004;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 25351641 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.5097;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25351694 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8282;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25351724 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.756;LDAF=0.0031;AVGPOST=0.9965;RSQ=0.5788;ERATE=0.0005;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25351835 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0512;AVGPOST=0.9997;RSQ=0.9973;ERATE=0.0003;THETA=0.0006;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 25351850 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0412;AVGPOST=0.9996;RSQ=0.9952;ERATE=0.0004;THETA=0.0006;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 25351971 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.771;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6231;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25352015 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8762;ERATE=0.0004;THETA=0.0017;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25352123 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0063;AVGPOST=0.9992;RSQ=0.9431;ERATE=0.0004;THETA=0.0011;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 25352186 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6025;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25352227 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25352364 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7567;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25352410 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.6337;ERATE=0.0003;THETA=0.0065;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25352498 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5035;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25352583 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0249;AVGPOST=0.9987;RSQ=0.9808;ERATE=0.0004;THETA=0.0003;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 25352623 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1311;AVGPOST=0.9976;RSQ=0.9923;ERATE=0.0005;THETA=0.0004;AC=286;AN=2184 GT:DS:GL:BD 0.13095239 0
1 25352733 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0204;AVGPOST=0.9941;RSQ=0.8786;ERATE=0.0005;THETA=0.0019;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 25352745 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.769;LDAF=0.0036;AVGPOST=0.9973;RSQ=0.6727;ERATE=0.0005;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25352791 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0713;AVGPOST=0.9985;RSQ=0.9924;ERATE=0.0003;THETA=0.0005;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 25352803 . AAAT A 218 PASS INDEL;BAVGPOST=0.986;BRSQ=0.646;LDAF=0.0443;AVGPOST=0.9477;RSQ=0.4769;ERATE=0.0164;THETA=0.0010;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 25352876 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25353192 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.6270;AVGPOST=0.9967;RSQ=0.9947;ERATE=0.0005;THETA=0.0003;AC=1367;AN=2184 GT:DS:GL:BD 0.62591577 1
1 25353235 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.954;LDAF=0.9215;AVGPOST=0.9815;RSQ=0.9074;ERATE=0.0042;THETA=0.0006;AC=2019;AN=2184 GT:DS:GL:BD 0.92445058 1
1 25353256 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.2225;AVGPOST=0.9961;RSQ=0.9917;ERATE=0.0004;THETA=0.0005;AC=488;AN=2184 GT:DS:GL:BD 0.22344323 0
1 25353461 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0681;AVGPOST=0.9989;RSQ=0.9929;ERATE=0.0005;THETA=0.0006;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 25353528 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0033;AVGPOST=0.9978;RSQ=0.7012;ERATE=0.0006;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25353554 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0056;AVGPOST=0.9996;RSQ=0.9654;ERATE=0.0004;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 25353583 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0045;AVGPOST=0.9992;RSQ=0.9203;ERATE=0.0004;THETA=0.0013;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25353662 . CTT C 34 PASS INDEL;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0021;AVGPOST=0.9974;RSQ=0.5325;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25353692 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6618;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25353703 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0684;AVGPOST=0.9986;RSQ=0.9918;ERATE=0.0003;THETA=0.0008;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 25353780 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8664;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25353794 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.965;LDAF=0.0363;AVGPOST=0.9968;RSQ=0.9683;ERATE=0.0004;THETA=0.0005;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 25353830 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0067;AVGPOST=0.9994;RSQ=0.9548;ERATE=0.0004;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 25353905 . CTG C 46 PASS INDEL;BAVGPOST=1.000;BRSQ=0.770;LDAF=0.0027;AVGPOST=0.9964;RSQ=0.4571;ERATE=0.0008;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25353946 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1245;AVGPOST=0.9994;RSQ=0.9976;ERATE=0.0004;THETA=0.0002;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 25354014 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5953;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25354020 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1701;AVGPOST=0.9975;RSQ=0.9930;ERATE=0.0005;THETA=0.0007;AC=374;AN=2184 GT:DS:GL:BD 0.17124543 0
1 25354078 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9764;ERATE=0.0004;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 25354117 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25354201 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5677;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25354274 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1689;AVGPOST=0.9960;RSQ=0.9885;ERATE=0.0005;THETA=0.0003;AC=368;AN=2184 GT:DS:GL:BD 0.16849817 0
1 25354289 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.824;LDAF=0.0034;AVGPOST=0.9985;RSQ=0.8057;ERATE=0.0009;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25354292 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0047;AVGPOST=0.9989;RSQ=0.9050;ERATE=0.0005;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25354324 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0252;AVGPOST=0.9986;RSQ=0.9768;ERATE=0.0004;THETA=0.0005;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 25354454 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.964;LDAF=0.0358;AVGPOST=0.9960;RSQ=0.9615;ERATE=0.0003;THETA=0.0003;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 25354481 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0110;AVGPOST=0.9990;RSQ=0.9603;ERATE=0.0004;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 25354495 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0075;AVGPOST=0.9995;RSQ=0.9678;ERATE=0.0003;THETA=0.0001;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 25354551 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8310;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25354702 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.986;LDAF=0.0367;AVGPOST=0.9958;RSQ=0.9532;ERATE=0.0004;THETA=0.0002;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 25354776 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8171;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25354842 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.5082;AVGPOST=0.9966;RSQ=0.9946;ERATE=0.0005;THETA=0.0006;AC=1110;AN=2184 GT:DS:GL:BD 0.50824177 1
1 25354915 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4648;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25355083 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0442;AVGPOST=0.9991;RSQ=0.9916;ERATE=0.0004;THETA=0.0004;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 25355234 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9107;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25355280 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0164;AVGPOST=0.9991;RSQ=0.9774;ERATE=0.0005;THETA=0.0002;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 25355368 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0459;AVGPOST=0.9990;RSQ=0.9902;ERATE=0.0005;THETA=0.0007;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 25355376 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8652;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25355399 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.886;LDAF=0.0212;AVGPOST=0.9925;RSQ=0.8592;ERATE=0.0003;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 25355402 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0004;AVGPOST=0.9994;RSQ=0.4555;ERATE=0.0004;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 25355459 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.864;LDAF=0.0051;AVGPOST=0.9979;RSQ=0.8264;ERATE=0.0004;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25355491 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0172;AVGPOST=0.9995;RSQ=0.9877;ERATE=0.0003;THETA=0.0006;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 25355504 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7141;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25355510 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.670;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6776;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25355557 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.867;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9193;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25355699 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25355772 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8441;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25355796 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0047;AVGPOST=0.9988;RSQ=0.8876;ERATE=0.0004;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25355858 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.8964;AVGPOST=0.9969;RSQ=0.9877;ERATE=0.0005;THETA=0.0004;AC=1956;AN=2184 GT:DS:GL:BD 0.89560437 1
1 25355897 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0026;AVGPOST=0.9979;RSQ=0.6953;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25355930 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0646;AVGPOST=0.9979;RSQ=0.9869;ERATE=0.0006;THETA=0.0005;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 25355974 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0103;AVGPOST=0.9996;RSQ=0.9815;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 25356004 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0067;AVGPOST=0.9985;RSQ=0.9140;ERATE=0.0004;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 25356011 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5532;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25356070 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.948;LDAF=0.0061;AVGPOST=0.9995;RSQ=0.9621;ERATE=0.0003;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 25356371 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.742;LDAF=0.0309;AVGPOST=0.9755;RSQ=0.6800;ERATE=0.0087;THETA=0.0004;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 25356433 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9635;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25356585 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8473;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25356604 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.792;LDAF=0.0244;AVGPOST=0.9845;RSQ=0.7499;ERATE=0.0170;THETA=0.0002;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 25356617 . TC T 64 PASS INDEL;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4705;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25356624 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0030;AVGPOST=0.9983;RSQ=0.7895;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25356695 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6432;ERATE=0.0003;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25356704 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8272;AVGPOST=0.9999;RSQ=0.9996;ERATE=0.0003;THETA=0.0003;AC=1806;AN=2184 GT:DS:GL:BD 0.82692307 1
1 25356719 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8272;AVGPOST=0.9995;RSQ=0.9986;ERATE=0.0003;THETA=0.0006;AC=1806;AN=2184 GT:DS:GL:BD 0.82692307 1
1 25356842 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0050;AVGPOST=0.9985;RSQ=0.8680;ERATE=0.0005;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25356843 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5926;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25356925 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.887;LDAF=0.0159;AVGPOST=0.9981;RSQ=0.9525;ERATE=0.0004;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 25357053 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9464;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25357272 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9194;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25357327 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8510;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25357367 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1143;AVGPOST=0.9971;RSQ=0.9890;ERATE=0.0005;THETA=0.0003;AC=250;AN=2184 GT:DS:GL:BD 0.11446887 0
1 25357471 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6347;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25357520 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0035;AVGPOST=0.9990;RSQ=0.8950;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25357639 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8286;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25357715 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.8961;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25357804 . AG A 109 PASS INDEL;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.7890;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25357813 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.898;LDAF=0.0213;AVGPOST=0.9973;RSQ=0.9574;ERATE=0.0004;THETA=0.0004;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 25357837 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25357864 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.8450;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25357865 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0045;AVGPOST=0.9992;RSQ=0.9203;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25357884 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7740;ERATE=0.0005;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25358013 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.9093;AVGPOST=0.9994;RSQ=0.9966;ERATE=0.0003;THETA=0.0004;AC=1986;AN=2184 GT:DS:GL:BD 0.90934068 1
1 25358143 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7457;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25358211 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6160;AVGPOST=0.9981;RSQ=0.9969;ERATE=0.0004;THETA=0.0025;AC=1345;AN=2184 GT:DS:GL:BD 0.61584246 1
1 25358257 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25358376 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9213;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25358451 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8105;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25358506 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5898;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25358548 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8085;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25358586 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0127;AVGPOST=0.9981;RSQ=0.9489;ERATE=0.0004;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 25358706 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6136;AVGPOST=0.9970;RSQ=0.9953;ERATE=0.0007;THETA=0.0005;AC=1340;AN=2184 GT:DS:GL:BD 0.61355311 1
1 25358809 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0004;THETA=0.0053;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25358826 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5968;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25358855 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7379;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25359140 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25359267 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25359373 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.941;LDAF=0.0413;AVGPOST=0.9929;RSQ=0.9372;ERATE=0.0004;THETA=0.0003;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 25359423 . TCA T 111 PASS INDEL;BAVGPOST=0.999;BRSQ=0.813;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6655;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25359427 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7232;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25359571 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0426;AVGPOST=0.9995;RSQ=0.9941;ERATE=0.0003;THETA=0.0004;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 25359664 . AGG A 25 PASS INDEL;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25359724 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0191;AVGPOST=0.9983;RSQ=0.9673;ERATE=0.0004;THETA=0.0002;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 25359830 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9019;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25359893 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25359929 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.7867;AVGPOST=0.9978;RSQ=0.9945;ERATE=0.0005;THETA=0.0002;AC=1717;AN=2184 GT:DS:GL:BD 0.78617215 1
1 25359935 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9496;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25360057 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7388;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25360288 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0827;AVGPOST=0.9999;RSQ=0.9992;ERATE=0.0003;THETA=0.0003;AC=181;AN=2184 GT:DS:GL:BD 0.08287546 0
1 25360313 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.769;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7890;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25360327 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0226;AVGPOST=0.9992;RSQ=0.9842;ERATE=0.0004;THETA=0.0006;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 25360441 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0020;AVGPOST=0.9985;RSQ=0.6936;ERATE=0.0005;THETA=0.0021;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25360466 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.952;LDAF=0.0365;AVGPOST=0.9945;RSQ=0.9470;ERATE=0.0004;THETA=0.0004;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 25360536 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5711;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25360554 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5189;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25360561 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0026;AVGPOST=0.9991;RSQ=0.8386;ERATE=0.0005;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25360703 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.817;BRSQ=0.421;LDAF=0.2903;AVGPOST=0.7763;RSQ=0.4309;ERATE=0.1029;THETA=0.0008;AC=484;AN=2184 GT:DS:GL:BD 0.22161172 0
1 25360813 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.980;LDAF=0.0790;AVGPOST=0.9966;RSQ=0.9825;ERATE=0.0006;THETA=0.0036;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 25360961 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0791;AVGPOST=0.9980;RSQ=0.9903;ERATE=0.0005;THETA=0.0004;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 25360964 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.665;LDAF=0.0020;AVGPOST=0.9993;RSQ=0.8516;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25360975 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25361115 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0146;AVGPOST=0.9993;RSQ=0.9787;ERATE=0.0003;THETA=0.0007;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 25361242 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2720;AVGPOST=0.9973;RSQ=0.9944;ERATE=0.0007;THETA=0.0006;AC=595;AN=2184 GT:DS:GL:BD 0.27243590 0
1 25361272 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.822;LDAF=0.0328;AVGPOST=0.9895;RSQ=0.8632;ERATE=0.0004;THETA=0.0003;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 25361434 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9266;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25361605 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.788;LDAF=0.0044;AVGPOST=0.9989;RSQ=0.8929;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25361631 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.760;LDAF=0.0034;AVGPOST=0.9969;RSQ=0.6771;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25361724 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2537;AVGPOST=0.9973;RSQ=0.9946;ERATE=0.0006;THETA=0.0004;AC=554;AN=2184 GT:DS:GL:BD 0.25366300 0
1 25361777 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3176;AVGPOST=0.9993;RSQ=0.9985;ERATE=0.0003;THETA=0.0002;AC=694;AN=2184 GT:DS:GL:BD 0.31776556 0
1 25362032 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8036;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25362089 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9535;ERATE=0.0003;THETA=0.0022;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25362109 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5650;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25362269 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7836;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25362275 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8810;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25362335 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8813;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25362527 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5802;AVGPOST=0.9981;RSQ=0.9970;ERATE=0.0015;THETA=0.0005;AC=1267;AN=2184 GT:DS:GL:BD 0.58012819 1
1 25362642 . TCAA T 18258 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1215;AVGPOST=0.9978;RSQ=0.9920;ERATE=0.0006;THETA=0.0002;AC=265;AN=2184 GT:DS:GL:BD 0.12133700 0
1 25362745 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9999;AVGPOST=0.9999;RSQ=0.0499;ERATE=0.0003;THETA=0.0004;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 25362790 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=1.0000;AVGPOST=1.0000;RSQ=0.0500;ERATE=0.0003;THETA=0.0002;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 25362845 . GCAT G 464 PASS INDEL;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0036;AVGPOST=0.9982;RSQ=0.8299;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25362858 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0388;AVGPOST=0.9988;RSQ=0.9859;ERATE=0.0003;THETA=0.0005;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 25362923 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7589;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25362972 . AC A 25 PASS INDEL;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7149;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25363066 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0124;AVGPOST=0.9999;RSQ=0.9964;ERATE=0.0003;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 25363176 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8178;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25363180 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.693;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8497;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25363184 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2512;AVGPOST=0.9995;RSQ=0.9986;ERATE=0.0004;THETA=0.0003;AC=549;AN=2184 GT:DS:GL:BD 0.25137362 0
1 25363285 . C CA 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5335;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25363287 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6704;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25363297 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25363313 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1703;AVGPOST=0.9986;RSQ=0.9958;ERATE=0.0004;THETA=0.0004;AC=372;AN=2184 GT:DS:GL:BD 0.17032968 0
1 25363320 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0036;AVGPOST=0.9999;RSQ=0.9885;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25363338 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6702;AVGPOST=0.9982;RSQ=0.9966;ERATE=0.0004;THETA=0.0001;AC=1461;AN=2184 GT:DS:GL:BD 0.66895604 1
1 25363430 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0054;AVGPOST=0.9979;RSQ=0.8791;ERATE=0.0004;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 25363461 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0051;AVGPOST=0.9996;RSQ=0.9621;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25363512 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8730;AVGPOST=0.9997;RSQ=0.9988;ERATE=0.0003;THETA=0.0009;AC=1906;AN=2184 GT:DS:GL:BD 0.87271065 1
1 25363523 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1683;AVGPOST=0.9989;RSQ=0.9964;ERATE=0.0003;THETA=0.0010;AC=368;AN=2184 GT:DS:GL:BD 0.16849817 0
1 25363656 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6916;AVGPOST=0.9989;RSQ=0.9977;ERATE=0.0004;THETA=0.0002;AC=1509;AN=2184 GT:DS:GL:BD 0.69093406 1
1 25363688 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0168;AVGPOST=0.9992;RSQ=0.9858;ERATE=0.0003;THETA=0.0011;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 25363707 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7145;AVGPOST=0.9994;RSQ=0.9987;ERATE=0.0003;THETA=0.0003;AC=1559;AN=2184 GT:DS:GL:BD 0.71382785 1
1 25363718 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0886;AVGPOST=0.9995;RSQ=0.9973;ERATE=0.0003;THETA=0.0004;AC=193;AN=2184 GT:DS:GL:BD 0.08836997 0
1 25363737 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8893;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25363785 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9244;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25363787 . CT C 54 PASS INDEL;BAVGPOST=1.000;BRSQ=0.651;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7386;ERATE=0.0005;THETA=0.0024;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25363794 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6491;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25363796 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8496;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25363804 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.8071;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25363823 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25363935 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0184;AVGPOST=0.9998;RSQ=0.9944;ERATE=0.0003;THETA=0.0003;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 25363986 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9670;ERATE=0.0004;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25364054 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.810;LDAF=0.0038;AVGPOST=0.9977;RSQ=0.7620;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25364081 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9987;RSQ=0.8765;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25364216 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.699;LDAF=0.0048;AVGPOST=0.9973;RSQ=0.7824;ERATE=0.0005;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25364260 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.962;LDAF=0.9178;AVGPOST=0.9894;RSQ=0.9464;ERATE=0.0009;THETA=0.0005;AC=2011;AN=2184 GT:DS:GL:BD 0.92078757 1
1 25364341 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.941;BRSQ=0.881;LDAF=0.5746;AVGPOST=0.8551;RSQ=0.7580;ERATE=0.0201;THETA=0.0001;AC=1244;AN=2184 GT:DS:GL:BD 0.56959707 1
1 25364443 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6037;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25364561 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9375;ERATE=0.0004;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25364567 . GA G 2030 PASS INDEL;BAVGPOST=0.989;BRSQ=0.728;LDAF=0.0197;AVGPOST=0.9896;RSQ=0.8129;ERATE=0.0009;THETA=0.0020;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 25364636 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.982;LDAF=0.0869;AVGPOST=0.9980;RSQ=0.9908;ERATE=0.0003;THETA=0.0003;AC=188;AN=2184 GT:DS:GL:BD 0.08608059 0
1 25364652 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.6308;AVGPOST=0.9972;RSQ=0.9953;ERATE=0.0004;THETA=0.0005;AC=1376;AN=2184 GT:DS:GL:BD 0.63003665 1
1 25364733 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.773;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.8167;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25364765 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25364822 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6250;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25364988 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25365164 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0024;AVGPOST=0.9993;RSQ=0.8644;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25365174 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25365211 . AATT A 882 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0045;AVGPOST=0.9995;RSQ=0.9546;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25365263 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25365283 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7755;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25365355 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9254;AVGPOST=0.9996;RSQ=0.9975;ERATE=0.0003;THETA=0.0003;AC=2021;AN=2184 GT:DS:GL:BD 0.92536628 1
1 25365360 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.0024;AVGPOST=0.9990;RSQ=0.8213;ERATE=0.0006;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25365365 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1645;AVGPOST=0.9984;RSQ=0.9947;ERATE=0.0004;THETA=0.0004;AC=359;AN=2184 GT:DS:GL:BD 0.16437729 0
1 25365748 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0023;AVGPOST=0.9976;RSQ=0.6493;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25365845 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6467;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25365922 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.8924;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25366038 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.8928;AVGPOST=0.9989;RSQ=0.9949;ERATE=0.0003;THETA=0.0015;AC=1950;AN=2184 GT:DS:GL:BD 0.89285713 1
1 25366047 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5802;AVGPOST=0.9970;RSQ=0.9956;ERATE=0.0017;THETA=0.0018;AC=1267;AN=2184 GT:DS:GL:BD 0.58012819 1
1 25366067 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0003;AVGPOST=0.9995;RSQ=0.2496;ERATE=0.0003;THETA=0.0008;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 25366160 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9871;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25366182 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8934;AVGPOST=0.9988;RSQ=0.9948;ERATE=0.0005;THETA=0.0009;AC=1952;AN=2184 GT:DS:GL:BD 0.89377290 1
1 25366197 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9801;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25366218 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9916;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 25366219 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.2638;AVGPOST=0.9975;RSQ=0.9948;ERATE=0.0004;THETA=0.0003;AC=574;AN=2184 GT:DS:GL:BD 0.26282051 0
1 25366231 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.5798;AVGPOST=0.9986;RSQ=0.9977;ERATE=0.0005;THETA=0.0002;AC=1266;AN=2184 GT:DS:GL:BD 0.57967031 1
1 25366244 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.851;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25366271 . ATGC A 128 PASS INDEL;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7641;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25366423 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5953;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25366504 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0183;AVGPOST=0.9989;RSQ=0.9795;ERATE=0.0003;THETA=0.0002;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 25366563 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0471;AVGPOST=1.0000;RSQ=0.9996;ERATE=0.0003;THETA=0.0003;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 25366624 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.5845;AVGPOST=0.9979;RSQ=0.9965;ERATE=0.0007;THETA=0.0005;AC=1276;AN=2184 GT:DS:GL:BD 0.58424908 1
1 25366640 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.8938;AVGPOST=0.9994;RSQ=0.9969;ERATE=0.0004;THETA=0.0002;AC=1952;AN=2184 GT:DS:GL:BD 0.89377290 1
1 25366786 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8556;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25366917 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25366918 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25366987 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.4069;AVGPOST=0.9973;RSQ=0.9951;ERATE=0.0007;THETA=0.0003;AC=887;AN=2184 GT:DS:GL:BD 0.40613553 0
1 25367002 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.830;LDAF=0.0052;AVGPOST=0.9984;RSQ=0.8684;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25367011 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0126;AVGPOST=0.9983;RSQ=0.9572;ERATE=0.0004;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 25367016 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9006;AVGPOST=0.9989;RSQ=0.9943;ERATE=0.0003;THETA=0.0004;AC=1967;AN=2184 GT:DS:GL:BD 0.90064102 1
1 25367084 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2640;AVGPOST=0.9983;RSQ=0.9959;ERATE=0.0007;THETA=0.0003;AC=576;AN=2184 GT:DS:GL:BD 0.26373628 0
1 25367086 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0475;AVGPOST=0.9990;RSQ=0.9920;ERATE=0.0004;THETA=0.0004;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 25367201 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.789;LDAF=0.0034;AVGPOST=0.9976;RSQ=0.7071;ERATE=0.0005;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25367213 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6282;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25367274 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5334;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25367397 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25367501 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.880;LDAF=0.0073;AVGPOST=0.9979;RSQ=0.8783;ERATE=0.0004;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 25367514 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8667;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25367587 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.937;LDAF=0.0215;AVGPOST=0.9972;RSQ=0.9474;ERATE=0.0003;THETA=0.0002;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 25367669 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8422;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25367737 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8893;AVGPOST=0.9985;RSQ=0.9936;ERATE=0.0005;THETA=0.0002;AC=1943;AN=2184 GT:DS:GL:BD 0.88965201 1
1 25367798 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0013;AVGPOST=0.9998;RSQ=0.9373;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25367913 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25368029 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25368033 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.9047;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25368230 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.8939;AVGPOST=0.9996;RSQ=0.9979;ERATE=0.0004;THETA=0.0003;AC=1952;AN=2184 GT:DS:GL:BD 0.89377290 1
1 25368348 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.8997;AVGPOST=0.9977;RSQ=0.9888;ERATE=0.0006;THETA=0.0003;AC=1967;AN=2184 GT:DS:GL:BD 0.90064102 1
1 25368392 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5663;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25368395 rs71014330 A AT 9532 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0889;AVGPOST=0.9983;RSQ=0.9907;ERATE=0.0005;THETA=0.0003;AC=192;AN=2184 GT:DS:GL:BD 0.08791209 0
1 25368442 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5843;AVGPOST=0.9940;RSQ=0.9908;ERATE=0.0008;THETA=0.0003;AC=1274;AN=2184 GT:DS:GL:BD 0.58333331 1
1 25368484 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.850;LDAF=0.0048;AVGPOST=0.9974;RSQ=0.8042;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25368513 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0082;AVGPOST=0.9990;RSQ=0.9458;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 25368517 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0065;AVGPOST=0.9988;RSQ=0.9309;ERATE=0.0003;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 25368609 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0227;AVGPOST=0.9984;RSQ=0.9698;ERATE=0.0004;THETA=0.0004;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 25368768 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.8986;AVGPOST=0.9988;RSQ=0.9934;ERATE=0.0006;THETA=0.0003;AC=1963;AN=2184 GT:DS:GL:BD 0.89880955 1
1 25368802 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25368814 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0058;AVGPOST=0.9993;RSQ=0.9478;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 25368861 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6714;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25368913 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6103;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25368964 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.745;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8474;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25368974 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0023;AVGPOST=0.9981;RSQ=0.6454;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25368988 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25369006 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5826;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25369009 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25369109 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.567;LDAF=0.0016;AVGPOST=0.9981;RSQ=0.5572;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25369134 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4793;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25369168 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1000;AVGPOST=0.9992;RSQ=0.9957;ERATE=0.0005;THETA=0.0006;AC=217;AN=2184 GT:DS:GL:BD 0.09935898 0
1 25369238 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.9252;AVGPOST=0.9992;RSQ=0.9947;ERATE=0.0005;THETA=0.0003;AC=2021;AN=2184 GT:DS:GL:BD 0.92536628 1
1 25369334 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.668;LDAF=0.0029;AVGPOST=0.9966;RSQ=0.5635;ERATE=0.0009;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25369376 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4751;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25369411 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0019;AVGPOST=0.9971;RSQ=0.3965;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25369455 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.1731;AVGPOST=0.9959;RSQ=0.9884;ERATE=0.0005;THETA=0.0005;AC=376;AN=2184 GT:DS:GL:BD 0.17216118 0
1 25369467 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.925;LDAF=0.0215;AVGPOST=0.9975;RSQ=0.9542;ERATE=0.0003;THETA=0.0005;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 25369504 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8937;AVGPOST=0.9992;RSQ=0.9961;ERATE=0.0004;THETA=0.0003;AC=1952;AN=2184 GT:DS:GL:BD 0.89377290 1
1 25369576 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8934;AVGPOST=0.9985;RSQ=0.9926;ERATE=0.0006;THETA=0.0006;AC=1952;AN=2184 GT:DS:GL:BD 0.89377290 1
1 25369662 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0063;AVGPOST=0.9993;RSQ=0.9514;ERATE=0.0005;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 25369695 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7835;ERATE=0.0004;THETA=0.0039;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25369844 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.961;LDAF=0.9123;AVGPOST=0.9966;RSQ=0.9812;ERATE=0.0006;THETA=0.0004;AC=1994;AN=2184 GT:DS:GL:BD 0.91300368 1
1 25369856 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.729;LDAF=0.0058;AVGPOST=0.9956;RSQ=0.6731;ERATE=0.0007;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25369866 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.941;LDAF=0.9352;AVGPOST=0.9936;RSQ=0.9589;ERATE=0.0012;THETA=0.0002;AC=2043;AN=2184 GT:DS:GL:BD 0.93543959 1
1 25369885 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0099;AVGPOST=0.9993;RSQ=0.9700;ERATE=0.0005;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 25369891 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5845;ERATE=0.0004;THETA=0.0039;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25369896 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0026;AVGPOST=0.9974;RSQ=0.5913;ERATE=0.0006;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25370099 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8926;AVGPOST=0.9975;RSQ=0.9903;ERATE=0.0004;THETA=0.0018;AC=1950;AN=2184 GT:DS:GL:BD 0.89285713 1
1 25370114 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25370193 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0888;AVGPOST=0.9989;RSQ=0.9946;ERATE=0.0004;THETA=0.0002;AC=192;AN=2184 GT:DS:GL:BD 0.08791209 0
1 25370222 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.819;LDAF=0.0071;AVGPOST=0.9968;RSQ=0.8236;ERATE=0.0004;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 25370356 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7424;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25370394 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1480;AVGPOST=0.9990;RSQ=0.9965;ERATE=0.0004;THETA=0.0005;AC=324;AN=2184 GT:DS:GL:BD 0.14835165 0
1 25370405 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7819;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25370491 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5800;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25370521 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8913;AVGPOST=0.9989;RSQ=0.9953;ERATE=0.0004;THETA=0.0008;AC=1947;AN=2184 GT:DS:GL:BD 0.89148355 1
1 25370630 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9421;ERATE=0.0005;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25370647 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8984;AVGPOST=0.9997;RSQ=0.9985;ERATE=0.0004;THETA=0.0009;AC=1962;AN=2184 GT:DS:GL:BD 0.89835167 1
1 25370667 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0325;AVGPOST=0.9997;RSQ=0.9957;ERATE=0.0003;THETA=0.0011;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 25370729 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25370832 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6436;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25370851 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0075;AVGPOST=0.9995;RSQ=0.9690;ERATE=0.0004;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 25370864 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8696;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25370868 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8908;AVGPOST=0.9980;RSQ=0.9921;ERATE=0.0005;THETA=0.0002;AC=1947;AN=2184 GT:DS:GL:BD 0.89148355 1
1 25370911 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0011;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25370952 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9943;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 25371011 . TA T 110 PASS INDEL;BAVGPOST=0.956;BRSQ=0.403;LDAF=0.0723;AVGPOST=0.9015;RSQ=0.4246;ERATE=0.0148;THETA=0.0007;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 25371039 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0026;AVGPOST=0.9973;RSQ=0.5397;ERATE=0.0007;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25371062 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0218;AVGPOST=0.9985;RSQ=0.9715;ERATE=0.0004;THETA=0.0004;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 25371077 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9184;AVGPOST=0.9979;RSQ=0.9879;ERATE=0.0005;THETA=0.0007;AC=2006;AN=2184 GT:DS:GL:BD 0.91849816 1
1 25371082 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1470;AVGPOST=0.9976;RSQ=0.9918;ERATE=0.0005;THETA=0.0015;AC=322;AN=2184 GT:DS:GL:BD 0.14743590 0
1 25371098 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1707;AVGPOST=0.9966;RSQ=0.9902;ERATE=0.0004;THETA=0.0004;AC=374;AN=2184 GT:DS:GL:BD 0.17124543 0
1 25371139 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0020;AVGPOST=0.9986;RSQ=0.7650;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25371216 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.962;LDAF=0.8696;AVGPOST=0.9552;RSQ=0.8445;ERATE=0.0061;THETA=0.0004;AC=1930;AN=2184 GT:DS:GL:BD 0.88369966 1
1 25371282 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.981;LDAF=0.4108;AVGPOST=0.9804;RSQ=0.9702;ERATE=0.0029;THETA=0.0003;AC=899;AN=2184 GT:DS:GL:BD 0.41163003 0
1 25371313 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.980;LDAF=0.8788;AVGPOST=0.9765;RSQ=0.9147;ERATE=0.0035;THETA=0.0003;AC=1933;AN=2184 GT:DS:GL:BD 0.88507324 1
1 25371357 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0039;AVGPOST=0.9982;RSQ=0.8281;ERATE=0.0004;THETA=0.0013;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25371412 . AAGGG A 12434 PASS INDEL;BAVGPOST=0.731;BRSQ=0.493;LDAF=0.4936;AVGPOST=0.7155;RSQ=0.4726;ERATE=0.0833;THETA=0.0003;AC=1058;AN=2184 GT:DS:GL:BD 0.48443222 0
1 25371414 . GGGA G 517 PASS INDEL;BAVGPOST=0.781;BRSQ=0.390;LDAF=0.2091;AVGPOST=0.7800;RSQ=0.4482;ERATE=0.0255;THETA=0.0003;AC=323;AN=2184 GT:DS:GL:BD 0.14789377 0
1 25371416 . GAGGA G 5555 PASS INDEL;BAVGPOST=0.692;BRSQ=0.365;LDAF=0.3722;AVGPOST=0.6643;RSQ=0.3475;ERATE=0.0632;THETA=0.0006;AC=636;AN=2184 GT:DS:GL:BD 0.29120880 0
1 25371421 rs59194235 AG A 2942 PASS INDEL;BAVGPOST=0.852;BRSQ=0.546;LDAF=0.2454;AVGPOST=0.7685;RSQ=0.4701;ERATE=0.0366;THETA=0.0003;AC=380;AN=2184 GT:DS:GL:BD 0.17399268 0
1 25371429 . AG A 811 PASS INDEL;BAVGPOST=0.912;BRSQ=0.369;LDAF=0.1307;AVGPOST=0.8270;RSQ=0.3777;ERATE=0.0246;THETA=0.0003;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 25371593 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0052;AVGPOST=0.9979;RSQ=0.8284;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25371620 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8904;AVGPOST=0.9955;RSQ=0.9817;ERATE=0.0008;THETA=0.0005;AC=1945;AN=2184 GT:DS:GL:BD 0.89056778 1
1 25371661 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0029;AVGPOST=0.9992;RSQ=0.8758;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25371793 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2949;AVGPOST=0.9979;RSQ=0.9958;ERATE=0.0006;THETA=0.0004;AC=644;AN=2184 GT:DS:GL:BD 0.29487181 0
1 25371849 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0231;AVGPOST=0.9992;RSQ=0.9852;ERATE=0.0003;THETA=0.0003;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 25371912 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8904;AVGPOST=0.9980;RSQ=0.9911;ERATE=0.0004;THETA=0.0002;AC=1945;AN=2184 GT:DS:GL:BD 0.89056778 1
1 25371916 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.2497;AVGPOST=0.9907;RSQ=0.9795;ERATE=0.0016;THETA=0.0007;AC=541;AN=2184 GT:DS:GL:BD 0.24771062 0
1 25371940 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8909;AVGPOST=0.9981;RSQ=0.9922;ERATE=0.0006;THETA=0.0005;AC=1947;AN=2184 GT:DS:GL:BD 0.89148355 1
1 25372028 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0033;AVGPOST=0.9995;RSQ=0.9316;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25372102 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.4712;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25372107 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0033;AVGPOST=0.9987;RSQ=0.8252;ERATE=0.0007;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25372168 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0048;AVGPOST=0.9996;RSQ=0.9631;ERATE=0.0004;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25372200 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.669;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.8154;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25372245 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0234;AVGPOST=0.9976;RSQ=0.9612;ERATE=0.0004;THETA=0.0009;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 25372257 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.986;LDAF=0.8914;AVGPOST=0.9992;RSQ=0.9962;ERATE=0.0004;THETA=0.0003;AC=1947;AN=2184 GT:DS:GL:BD 0.89148355 1
1 25372263 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.627;LDAF=0.0013;AVGPOST=0.9981;RSQ=0.4485;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25372324 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7788;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25372338 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0045;AVGPOST=0.9989;RSQ=0.9130;ERATE=0.0004;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25372371 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1490;AVGPOST=0.9960;RSQ=0.9870;ERATE=0.0005;THETA=0.0002;AC=324;AN=2184 GT:DS:GL:BD 0.14835165 0
1 25372378 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8913;AVGPOST=0.9991;RSQ=0.9955;ERATE=0.0005;THETA=0.0003;AC=1947;AN=2184 GT:DS:GL:BD 0.89148355 1
1 25372456 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0326;AVGPOST=0.9994;RSQ=0.9922;ERATE=0.0004;THETA=0.0005;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 25372526 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.725;LDAF=0.0082;AVGPOST=0.9969;RSQ=0.8538;ERATE=0.0007;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 25372580 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4843;AVGPOST=0.9884;RSQ=0.9831;ERATE=0.0014;THETA=0.0004;AC=1060;AN=2184 GT:DS:GL:BD 0.48534799 0
1 25372589 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6430;AVGPOST=0.9953;RSQ=0.9923;ERATE=0.0005;THETA=0.0005;AC=1403;AN=2184 GT:DS:GL:BD 0.64239925 1
1 25372783 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7839;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25372807 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.8646;AVGPOST=0.9963;RSQ=0.9881;ERATE=0.0008;THETA=0.0003;AC=1889;AN=2184 GT:DS:GL:BD 0.86492676 1
1 25372816 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0288;AVGPOST=1.0000;RSQ=0.9993;ERATE=0.0003;THETA=0.0018;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 25372822 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.850;LDAF=0.0050;AVGPOST=0.9990;RSQ=0.9135;ERATE=0.0004;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25372840 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0300;AVGPOST=0.9993;RSQ=0.9908;ERATE=0.0005;THETA=0.0006;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 25372871 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0037;AVGPOST=0.9982;RSQ=0.8117;ERATE=0.0005;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25372881 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.978;LDAF=0.0299;AVGPOST=0.9994;RSQ=0.9922;ERATE=0.0004;THETA=0.0003;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 25372883 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7290;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25372903 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0097;AVGPOST=0.9998;RSQ=0.9896;ERATE=0.0003;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 25373015 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.8554;AVGPOST=0.9986;RSQ=0.9960;ERATE=0.0004;THETA=0.0002;AC=1868;AN=2184 GT:DS:GL:BD 0.85531133 1
1 25373067 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0118;AVGPOST=0.9993;RSQ=0.9698;ERATE=0.0005;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 25373227 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0056;AVGPOST=0.9988;RSQ=0.9059;ERATE=0.0004;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25373240 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.984;LDAF=0.1591;AVGPOST=0.9957;RSQ=0.9883;ERATE=0.0003;THETA=0.0031;AC=347;AN=2184 GT:DS:GL:BD 0.15888278 0
1 25373252 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0070;AVGPOST=0.9996;RSQ=0.9796;ERATE=0.0004;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 25373523 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0070;AVGPOST=0.9997;RSQ=0.9830;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 25373615 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0052;AVGPOST=0.9995;RSQ=0.9442;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25373716 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1926;AVGPOST=0.9984;RSQ=0.9959;ERATE=0.0005;THETA=0.0004;AC=422;AN=2184 GT:DS:GL:BD 0.19322345 0
1 25373758 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0050;AVGPOST=0.9991;RSQ=0.9219;ERATE=0.0003;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25373759 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6034;ERATE=0.0004;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25373846 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1942;AVGPOST=0.9977;RSQ=0.9935;ERATE=0.0009;THETA=0.0008;AC=425;AN=2184 GT:DS:GL:BD 0.19459707 0
1 25373860 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.764;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.5671;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25373989 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0029;AVGPOST=0.9998;RSQ=0.9618;ERATE=0.0003;THETA=0.0012;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25374099 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.836;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7528;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25374167 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0075;AVGPOST=0.9989;RSQ=0.9515;ERATE=0.0004;THETA=0.0008;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 25374180 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2723;AVGPOST=0.9956;RSQ=0.9912;ERATE=0.0011;THETA=0.0033;AC=591;AN=2184 GT:DS:GL:BD 0.27060440 0
1 25374226 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0158;AVGPOST=0.9992;RSQ=0.9774;ERATE=0.0005;THETA=0.0009;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 25374247 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1775;AVGPOST=0.9933;RSQ=0.9848;ERATE=0.0005;THETA=0.0006;AC=385;AN=2184 GT:DS:GL:BD 0.17628205 0
1 25374315 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0159;AVGPOST=0.9993;RSQ=0.9759;ERATE=0.0004;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 25374344 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9905;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25374421 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0049;AVGPOST=0.9989;RSQ=0.8978;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25374436 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0156;AVGPOST=0.9996;RSQ=0.9892;ERATE=0.0003;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 25374474 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.6932;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25374586 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2367;AVGPOST=0.9965;RSQ=0.9923;ERATE=0.0006;THETA=0.0002;AC=518;AN=2184 GT:DS:GL:BD 0.23717949 0
1 25374604 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6749;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25374633 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0049;AVGPOST=0.9993;RSQ=0.9331;ERATE=0.0004;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25374657 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1404;AVGPOST=0.9971;RSQ=0.9915;ERATE=0.0004;THETA=0.0003;AC=304;AN=2184 GT:DS:GL:BD 0.13919415 0
1 25374726 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.709;LDAF=0.0044;AVGPOST=0.9961;RSQ=0.6443;ERATE=0.0018;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25374808 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1388;AVGPOST=0.9988;RSQ=0.9968;ERATE=0.0003;THETA=0.0003;AC=304;AN=2184 GT:DS:GL:BD 0.13919415 0
1 25374837 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2022;AVGPOST=0.9987;RSQ=0.9965;ERATE=0.0005;THETA=0.0002;AC=443;AN=2184 GT:DS:GL:BD 0.20283882 0
1 25374869 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9118;AVGPOST=0.9992;RSQ=0.9954;ERATE=0.0004;THETA=0.0002;AC=1992;AN=2184 GT:DS:GL:BD 0.91208792 1
1 25374872 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0045;AVGPOST=0.9991;RSQ=0.9318;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25374895 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25374904 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.774;LDAF=0.0032;AVGPOST=0.9985;RSQ=0.7983;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25374950 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0092;AVGPOST=0.9999;RSQ=0.9954;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 25375002 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.6903;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25375004 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0022;AVGPOST=0.9996;RSQ=0.9202;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25375151 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.758;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.7897;ERATE=0.0004;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25375177 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4369;AVGPOST=0.9984;RSQ=0.9974;ERATE=0.0004;THETA=0.0003;AC=956;AN=2184 GT:DS:GL:BD 0.43772894 0
1 25375178 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0170;AVGPOST=0.9990;RSQ=0.9746;ERATE=0.0006;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 25375202 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0013;AVGPOST=0.9997;RSQ=0.9118;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25375257 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25375294 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=1.0000;RSQ=0.9879;ERATE=0.0003;THETA=0.0014;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25375325 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7959;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25375331 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9535;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25375371 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0018;AVGPOST=0.9999;RSQ=0.9762;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25375429 . TAGTC T 159 PASS INDEL;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4641;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25375434 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25375468 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.4381;AVGPOST=0.9967;RSQ=0.9949;ERATE=0.0006;THETA=0.0004;AC=955;AN=2184 GT:DS:GL:BD 0.43727106 0
1 25375469 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5013;ERATE=0.0007;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25375484 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6057;ERATE=0.0005;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25375524 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0046;AVGPOST=0.9998;RSQ=0.9761;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25375561 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4374;AVGPOST=0.9987;RSQ=0.9979;ERATE=0.0004;THETA=0.0005;AC=956;AN=2184 GT:DS:GL:BD 0.43772894 0
1 25375583 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2037;AVGPOST=0.9990;RSQ=0.9974;ERATE=0.0004;THETA=0.0002;AC=446;AN=2184 GT:DS:GL:BD 0.20421246 0
1 25375609 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9904;ERATE=0.0003;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 25375626 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0083;AVGPOST=0.9999;RSQ=0.9920;ERATE=0.0003;THETA=0.0012;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 25375775 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25375839 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0197;AVGPOST=0.9998;RSQ=0.9948;ERATE=0.0003;THETA=0.0003;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 25375867 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0073;AVGPOST=0.9990;RSQ=0.9410;ERATE=0.0004;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 25375922 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6963;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25375999 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.754;LDAF=0.0037;AVGPOST=0.9977;RSQ=0.7406;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25376008 . CCCTTG C 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0042;AVGPOST=0.9969;RSQ=0.7616;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25376012 . TGCCTTG T 171 PASS INDEL;BAVGPOST=0.999;BRSQ=0.825;LDAF=0.0041;AVGPOST=0.9970;RSQ=0.7666;ERATE=0.0003;THETA=0.0027;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25376093 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0064;AVGPOST=0.9992;RSQ=0.9494;ERATE=0.0004;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 25376097 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1398;AVGPOST=0.9973;RSQ=0.9913;ERATE=0.0005;THETA=0.0002;AC=304;AN=2184 GT:DS:GL:BD 0.13919415 0
1 25376191 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6293;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25376242 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.804;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8876;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25376335 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7966;ERATE=0.0003;THETA=0.0045;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25376410 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6434;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25376411 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4723;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25376548 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9089;AVGPOST=0.9997;RSQ=0.9982;ERATE=0.0003;THETA=0.0005;AC=1985;AN=2184 GT:DS:GL:BD 0.90888280 1
1 25376623 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1421;AVGPOST=0.9949;RSQ=0.9848;ERATE=0.0008;THETA=0.0002;AC=311;AN=2184 GT:DS:GL:BD 0.14239927 0
1 25376727 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0115;AVGPOST=0.9999;RSQ=0.9961;ERATE=0.0003;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 25376766 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9192;AVGPOST=0.9991;RSQ=0.9947;ERATE=0.0004;THETA=0.0003;AC=2008;AN=2184 GT:DS:GL:BD 0.91941392 1
1 25376928 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.941;LDAF=0.0237;AVGPOST=0.9980;RSQ=0.9684;ERATE=0.0003;THETA=0.0004;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 25376934 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7158;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25376969 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7163;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25376989 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25377026 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2154;AVGPOST=0.9973;RSQ=0.9946;ERATE=0.0005;THETA=0.0004;AC=469;AN=2184 GT:DS:GL:BD 0.21474358 0
1 25377166 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.987;LDAF=0.6701;AVGPOST=0.9960;RSQ=0.9931;ERATE=0.0005;THETA=0.0002;AC=1464;AN=2184 GT:DS:GL:BD 0.67032969 1
1 25377401 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25377419 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25377459 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0035;AVGPOST=0.9986;RSQ=0.8555;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25377552 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.833;LDAF=0.0045;AVGPOST=0.9975;RSQ=0.7878;ERATE=0.0004;THETA=0.0011;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25377566 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0006;AVGPOST=0.9992;RSQ=0.4456;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25377591 . CATT C 2095 PASS INDEL;BAVGPOST=0.998;BRSQ=0.928;LDAF=0.0157;AVGPOST=0.9990;RSQ=0.9679;ERATE=0.0005;THETA=0.0015;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 25377621 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2404;AVGPOST=0.9942;RSQ=0.9876;ERATE=0.0009;THETA=0.0005;AC=523;AN=2184 GT:DS:GL:BD 0.23946886 0
1 25377805 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5969;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25377814 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5701;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25377864 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0020;AVGPOST=0.9983;RSQ=0.6760;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25377908 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1185;AVGPOST=0.9975;RSQ=0.9913;ERATE=0.0005;THETA=0.0002;AC=258;AN=2184 GT:DS:GL:BD 0.11813187 0
1 25377947 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5261;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25377950 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.673;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4731;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25378038 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.8406;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25378147 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0065;AVGPOST=0.9995;RSQ=0.9651;ERATE=0.0003;THETA=0.0009;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 25378265 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.6635;AVGPOST=0.9983;RSQ=0.9968;ERATE=0.0005;THETA=0.0005;AC=1452;AN=2184 GT:DS:GL:BD 0.66483516 1
1 25378329 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7281;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25378344 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1292;AVGPOST=0.9994;RSQ=0.9977;ERATE=0.0003;THETA=0.0005;AC=283;AN=2184 GT:DS:GL:BD 0.12957875 0
1 25378358 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6650;AVGPOST=0.9984;RSQ=0.9971;ERATE=0.0003;THETA=0.0003;AC=1454;AN=2184 GT:DS:GL:BD 0.66575092 1
1 25378361 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.7474;ERATE=0.0003;THETA=0.0024;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25378406 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0047;AVGPOST=0.9959;RSQ=0.7047;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25378444 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.989;LDAF=0.4872;AVGPOST=0.9867;RSQ=0.9785;ERATE=0.0049;THETA=0.0003;AC=1060;AN=2184 GT:DS:GL:BD 0.48534799 0
1 25378453 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.863;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7644;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25378479 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.976;LDAF=0.8970;AVGPOST=0.9973;RSQ=0.9871;ERATE=0.0004;THETA=0.0003;AC=1960;AN=2184 GT:DS:GL:BD 0.89743590 1
1 25378495 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.701;LDAF=0.0024;AVGPOST=0.9962;RSQ=0.3801;ERATE=0.0004;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25378504 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8739;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25378513 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.987;LDAF=0.2901;AVGPOST=0.9962;RSQ=0.9918;ERATE=0.0007;THETA=0.0004;AC=633;AN=2184 GT:DS:GL:BD 0.28983516 0
1 25378662 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.6295;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25378668 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4194;AVGPOST=0.9948;RSQ=0.9925;ERATE=0.0006;THETA=0.0002;AC=916;AN=2184 GT:DS:GL:BD 0.41941392 0
1 25378720 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.987;LDAF=0.2498;AVGPOST=0.9973;RSQ=0.9942;ERATE=0.0004;THETA=0.0005;AC=544;AN=2184 GT:DS:GL:BD 0.24908425 0
1 25378815 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0029;AVGPOST=0.9981;RSQ=0.7470;ERATE=0.0003;THETA=0.0026;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25378844 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.858;LDAF=0.0182;AVGPOST=0.9940;RSQ=0.8694;ERATE=0.0006;THETA=0.0002;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 25378934 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0168;AVGPOST=0.9984;RSQ=0.9673;ERATE=0.0003;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 25379078 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0041;AVGPOST=0.9962;RSQ=0.6691;ERATE=0.0005;THETA=0.0044;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25379095 . TAAG T 212 PASS INDEL;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4944;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25379112 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0155;AVGPOST=0.9995;RSQ=0.9856;ERATE=0.0004;THETA=0.0002;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 25379145 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.823;LDAF=0.0059;AVGPOST=0.9960;RSQ=0.7584;ERATE=0.0005;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25379163 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1167;AVGPOST=0.9995;RSQ=0.9980;ERATE=0.0003;THETA=0.0021;AC=255;AN=2184 GT:DS:GL:BD 0.11675824 0
1 25379253 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1174;AVGPOST=0.9982;RSQ=0.9933;ERATE=0.0005;THETA=0.0002;AC=256;AN=2184 GT:DS:GL:BD 0.11721612 0
1 25379261 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0048;AVGPOST=0.9987;RSQ=0.8957;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25379319 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4400;AVGPOST=0.9965;RSQ=0.9938;ERATE=0.0005;THETA=0.0015;AC=961;AN=2184 GT:DS:GL:BD 0.44001833 0
1 25379330 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25379350 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9944;ERATE=0.0003;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 25379358 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.907;LDAF=0.0141;AVGPOST=0.9983;RSQ=0.9553;ERATE=0.0003;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 25379360 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2611;AVGPOST=0.9968;RSQ=0.9931;ERATE=0.0009;THETA=0.0019;AC=569;AN=2184 GT:DS:GL:BD 0.26053113 0
1 25379395 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.939;LDAF=0.0455;AVGPOST=0.9983;RSQ=0.9852;ERATE=0.0003;THETA=0.0002;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 25379484 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1526;AVGPOST=0.9991;RSQ=0.9971;ERATE=0.0004;THETA=0.0006;AC=334;AN=2184 GT:DS:GL:BD 0.15293041 0
1 25379541 . AC A 2272 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0238;AVGPOST=0.9990;RSQ=0.9843;ERATE=0.0004;THETA=0.0004;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 25379604 . TC T 36 PASS INDEL;BAVGPOST=0.999;BRSQ=0.746;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7050;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25379627 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25379640 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0003;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25379674 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9438;ERATE=0.0003;THETA=0.0014;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25379675 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9293;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25379746 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0021;AVGPOST=0.9990;RSQ=0.7986;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25379826 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0156;AVGPOST=0.9995;RSQ=0.9855;ERATE=0.0003;THETA=0.0006;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 25379868 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0036;AVGPOST=0.9991;RSQ=0.9262;ERATE=0.0003;THETA=0.0011;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25379935 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.6939;ERATE=0.0005;THETA=0.0066;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25379971 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0071;AVGPOST=0.9987;RSQ=0.9264;ERATE=0.0005;THETA=0.0009;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 25380023 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2861;AVGPOST=0.9963;RSQ=0.9925;ERATE=0.0007;THETA=0.0002;AC=624;AN=2184 GT:DS:GL:BD 0.28571430 0
1 25380024 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.805;LDAF=0.0127;AVGPOST=0.9949;RSQ=0.8422;ERATE=0.0005;THETA=0.0011;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 25380030 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25380065 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8643;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25380080 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9865;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25380116 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6338;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25380139 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2862;AVGPOST=0.9973;RSQ=0.9942;ERATE=0.0004;THETA=0.0004;AC=624;AN=2184 GT:DS:GL:BD 0.28571430 0
1 25380145 rs71268974 A ACCG 15754 PASS INDEL;BAVGPOST=0.975;BRSQ=0.943;LDAF=0.2762;AVGPOST=0.9709;RSQ=0.9457;ERATE=0.0047;THETA=0.0004;AC=609;AN=2184 GT:DS:GL:BD 0.27884614 0
1 25380281 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.840;LDAF=0.0040;AVGPOST=0.9981;RSQ=0.8012;ERATE=0.0005;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25380384 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0057;AVGPOST=0.9983;RSQ=0.8821;ERATE=0.0005;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25380415 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.760;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6034;ERATE=0.0006;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25380425 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5014;ERATE=0.0004;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25380454 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.885;LDAF=0.0051;AVGPOST=0.9997;RSQ=0.9743;ERATE=0.0004;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25380512 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.821;LDAF=0.0048;AVGPOST=0.9984;RSQ=0.8757;ERATE=0.0007;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25380586 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9996;AVGPOST=0.9992;RSQ=0.2883;ERATE=0.0004;THETA=0.0006;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 25380594 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25380646 . TC T 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.753;LDAF=0.0022;AVGPOST=0.9965;RSQ=0.3254;ERATE=0.0004;THETA=0.0041;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25380682 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8670;ERATE=0.0003;THETA=0.0025;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25380742 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0234;AVGPOST=0.9978;RSQ=0.9634;ERATE=0.0006;THETA=0.0005;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 25380847 . CTCCT C 5594 PASS INDEL;BAVGPOST=0.751;BRSQ=0.507;LDAF=0.3621;AVGPOST=0.7229;RSQ=0.5007;ERATE=0.0616;THETA=0.0023;AC=704;AN=2184 GT:DS:GL:BD 0.32234433 0
1 25380851 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.931;BRSQ=0.794;LDAF=0.2088;AVGPOST=0.9023;RSQ=0.7746;ERATE=0.0278;THETA=0.0017;AC=427;AN=2184 GT:DS:GL:BD 0.19551282 0
1 25380855 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.927;BRSQ=0.863;LDAF=0.5744;AVGPOST=0.8675;RSQ=0.7830;ERATE=0.0521;THETA=0.0016;AC=1280;AN=2184 GT:DS:GL:BD 0.58608061 1
1 25380875 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.938;BRSQ=0.751;LDAF=0.1658;AVGPOST=0.8957;RSQ=0.7072;ERATE=0.0270;THETA=0.0006;AC=311;AN=2184 GT:DS:GL:BD 0.14239927 0
1 25380890 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.887;BRSQ=0.734;LDAF=0.3554;AVGPOST=0.8294;RSQ=0.6636;ERATE=0.0813;THETA=0.0009;AC=708;AN=2184 GT:DS:GL:BD 0.32417583 0
1 25380913 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.947;BRSQ=0.838;LDAF=0.1890;AVGPOST=0.9333;RSQ=0.8350;ERATE=0.0133;THETA=0.0006;AC=393;AN=2184 GT:DS:GL:BD 0.17994505 0
1 25380926 . CT C 28 PASS INDEL;BAVGPOST=0.904;BRSQ=0.050;LDAF=0.1139;AVGPOST=0.8342;RSQ=0.3683;ERATE=0.0053;THETA=0.0040;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 25380951 . CT C 92 PASS INDEL;BAVGPOST=0.948;BRSQ=0.286;LDAF=0.0918;AVGPOST=0.8743;RSQ=0.4039;ERATE=0.0111;THETA=0.0053;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 25380953 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.853;BRSQ=0.660;LDAF=0.6464;AVGPOST=0.7937;RSQ=0.5817;ERATE=0.0745;THETA=0.0004;AC=1462;AN=2184 GT:DS:GL:BD 0.66941392 1
1 25380957 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.917;BRSQ=0.666;LDAF=0.1754;AVGPOST=0.8732;RSQ=0.6296;ERATE=0.0211;THETA=0.0046;AC=313;AN=2184 GT:DS:GL:BD 0.14331502 0
1 25380961 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.930;BRSQ=0.642;LDAF=0.1225;AVGPOST=0.9032;RSQ=0.6361;ERATE=0.0107;THETA=0.0009;AC=204;AN=2184 GT:DS:GL:BD 0.09340660 0
1 25380969 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.861;BRSQ=0.613;LDAF=0.7339;AVGPOST=0.8119;RSQ=0.5623;ERATE=0.0680;THETA=0.0005;AC=1713;AN=2184 GT:DS:GL:BD 0.78434068 1
1 25380969 . C CCCTT 274 PASS INDEL;BAVGPOST=0.895;BRSQ=0.291;LDAF=0.1383;AVGPOST=0.8170;RSQ=0.3868;ERATE=0.0169;THETA=0.0014;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 25380999 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9508;ERATE=0.0004;THETA=0.0031;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25381046 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0126;AVGPOST=0.9986;RSQ=0.9616;ERATE=0.0004;THETA=0.0007;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 25381063 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.6848;AVGPOST=0.9869;RSQ=0.9807;ERATE=0.0022;THETA=0.0040;AC=1494;AN=2184 GT:DS:GL:BD 0.68406594 1
1 25381081 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.940;LDAF=0.0308;AVGPOST=0.9969;RSQ=0.9587;ERATE=0.0004;THETA=0.0004;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 25381261 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.967;LDAF=0.0260;AVGPOST=0.9977;RSQ=0.9697;ERATE=0.0005;THETA=0.0005;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 25381285 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6171;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25381311 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.3819;AVGPOST=0.9941;RSQ=0.9898;ERATE=0.0012;THETA=0.0044;AC=834;AN=2184 GT:DS:GL:BD 0.38186812 0
1 25381326 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4567;ERATE=0.0005;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25381385 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.990;LDAF=0.5197;AVGPOST=0.9866;RSQ=0.9799;ERATE=0.0061;THETA=0.0010;AC=1134;AN=2184 GT:DS:GL:BD 0.51923078 1
1 25381458 . ACCG A 33 PASS INDEL;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0024;AVGPOST=0.9967;RSQ=0.4825;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25381488 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.761;LDAF=0.0032;AVGPOST=0.9984;RSQ=0.7788;ERATE=0.0005;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25381526 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.976;LDAF=0.6109;AVGPOST=0.9891;RSQ=0.9819;ERATE=0.0032;THETA=0.0008;AC=1334;AN=2184 GT:DS:GL:BD 0.61080587 1
1 25381547 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0273;AVGPOST=0.9986;RSQ=0.9776;ERATE=0.0004;THETA=0.0010;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 25381586 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.875;LDAF=0.0224;AVGPOST=0.9954;RSQ=0.9227;ERATE=0.0008;THETA=0.0010;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 25381627 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0511;AVGPOST=0.9976;RSQ=0.9825;ERATE=0.0022;THETA=0.0005;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 25381649 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0178;AVGPOST=0.9991;RSQ=0.9805;ERATE=0.0003;THETA=0.0015;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 25381675 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.9332;AVGPOST=0.9970;RSQ=0.9829;ERATE=0.0004;THETA=0.0023;AC=2038;AN=2184 GT:DS:GL:BD 0.93315017 1
1 25381725 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.987;LDAF=0.0690;AVGPOST=0.9981;RSQ=0.9915;ERATE=0.0004;THETA=0.0004;AC=151;AN=2184 GT:DS:GL:BD 0.06913920 0
1 25381839 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0051;AVGPOST=0.9990;RSQ=0.9298;ERATE=0.0004;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25381854 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0100;AVGPOST=0.9993;RSQ=0.9665;ERATE=0.0004;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 25382083 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.819;LDAF=0.0081;AVGPOST=0.9976;RSQ=0.8744;ERATE=0.0004;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 25382098 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.552;LDAF=0.0044;AVGPOST=0.9947;RSQ=0.5273;ERATE=0.0008;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25382101 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0068;AVGPOST=0.9981;RSQ=0.8841;ERATE=0.0005;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 25382140 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0054;AVGPOST=0.9993;RSQ=0.9396;ERATE=0.0003;THETA=0.0085;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25382157 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.694;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5724;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25382213 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0163;AVGPOST=0.9981;RSQ=0.9545;ERATE=0.0004;THETA=0.0002;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 25382238 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2156;AVGPOST=0.9955;RSQ=0.9902;ERATE=0.0006;THETA=0.0003;AC=471;AN=2184 GT:DS:GL:BD 0.21565934 0
1 25382262 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0004;THETA=0.0041;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25382317 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.631;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6108;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25382367 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25382476 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.828;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9216;ERATE=0.0005;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25382541 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7693;ERATE=0.0003;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25382556 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1752;AVGPOST=0.9976;RSQ=0.9931;ERATE=0.0006;THETA=0.0005;AC=382;AN=2184 GT:DS:GL:BD 0.17490843 0
1 25382618 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.4236;AVGPOST=0.9934;RSQ=0.9892;ERATE=0.0006;THETA=0.0019;AC=927;AN=2184 GT:DS:GL:BD 0.42445055 0
1 25382885 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25382889 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.838;LDAF=0.0081;AVGPOST=0.9974;RSQ=0.8841;ERATE=0.0004;THETA=0.0012;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 25382950 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6634;ERATE=0.0004;THETA=0.0022;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25382964 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4394;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25382973 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0032;AVGPOST=0.9992;RSQ=0.8880;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25383000 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0037;AVGPOST=0.9992;RSQ=0.9042;ERATE=0.0004;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25383062 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.878;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8211;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25383092 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0058;AVGPOST=0.9984;RSQ=0.8770;ERATE=0.0007;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25383101 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0044;AVGPOST=0.9960;RSQ=0.6297;ERATE=0.0006;THETA=0.0014;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25383123 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0721;AVGPOST=0.9969;RSQ=0.9817;ERATE=0.0004;THETA=0.0010;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 25383128 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.801;LDAF=0.0073;AVGPOST=0.9941;RSQ=0.6965;ERATE=0.0005;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25383130 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9503;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25383142 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25383258 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0032;AVGPOST=0.9995;RSQ=0.9297;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25383273 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0027;AVGPOST=0.9982;RSQ=0.7168;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25383304 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0036;AVGPOST=0.9974;RSQ=0.7379;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25383427 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.661;LDAF=0.0060;AVGPOST=0.9933;RSQ=0.5481;ERATE=0.0018;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25383508 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.718;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8053;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25383534 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9738;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25383542 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.734;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7566;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25383655 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6525;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25383766 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.8240;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25383832 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0315;AVGPOST=0.9997;RSQ=0.9956;ERATE=0.0004;THETA=0.0020;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 25383877 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0065;AVGPOST=0.9995;RSQ=0.9687;ERATE=0.0003;THETA=0.0010;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 25384107 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.838;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9404;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25384128 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9244;ERATE=0.0004;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25384154 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9890;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 25384187 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6186;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25384188 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0025;AVGPOST=0.9991;RSQ=0.8791;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25384221 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9994;RSQ=0.8568;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25384227 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8586;ERATE=0.0005;THETA=0.0047;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25384240 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25384352 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.743;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9147;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25384437 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.6655;AVGPOST=0.9951;RSQ=0.9920;ERATE=0.0005;THETA=0.0004;AC=1455;AN=2184 GT:DS:GL:BD 0.66620880 1
1 25384446 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0060;AVGPOST=0.9995;RSQ=0.9665;ERATE=0.0004;THETA=0.0028;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 25384515 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0323;AVGPOST=0.9994;RSQ=0.9916;ERATE=0.0003;THETA=0.0006;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 25384533 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.6060;AVGPOST=0.9951;RSQ=0.9919;ERATE=0.0007;THETA=0.0004;AC=1323;AN=2184 GT:DS:GL:BD 0.60576922 1
1 25384561 . AG A 652 PASS INDEL;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0067;AVGPOST=0.9984;RSQ=0.8945;ERATE=0.0006;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 25384621 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0152;AVGPOST=0.9984;RSQ=0.9609;ERATE=0.0004;THETA=0.0017;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 25384696 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25384704 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0222;AVGPOST=0.9994;RSQ=0.9884;ERATE=0.0003;THETA=0.0015;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 25384825 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.598;LDAF=0.0022;AVGPOST=0.9991;RSQ=0.8196;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25385186 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.846;BRSQ=0.650;LDAF=0.2625;AVGPOST=0.8565;RSQ=0.7448;ERATE=0.0040;THETA=0.0006;AC=567;AN=2184 GT:DS:GL:BD 0.25961539 0
1 25385193 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.778;BRSQ=0.596;LDAF=0.3270;AVGPOST=0.7872;RSQ=0.6444;ERATE=0.0168;THETA=0.0005;AC=670;AN=2184 GT:DS:GL:BD 0.30677655 0
1 25385515 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9545;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25385536 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.922;LDAF=0.1593;AVGPOST=0.9763;RSQ=0.9343;ERATE=0.0039;THETA=0.0003;AC=346;AN=2184 GT:DS:GL:BD 0.15842491 0
1 25386327 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6133;ERATE=0.0003;THETA=0.0037;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25386349 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25386603 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0089;AVGPOST=0.9958;RSQ=0.8153;ERATE=0.0007;THETA=0.0001;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 25386605 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.663;LDAF=0.0173;AVGPOST=0.9930;RSQ=0.8491;ERATE=0.0005;THETA=0.0005;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 25386628 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6834;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25386671 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.959;LDAF=0.1375;AVGPOST=0.9939;RSQ=0.9802;ERATE=0.0003;THETA=0.0003;AC=301;AN=2184 GT:DS:GL:BD 0.13782051 0
1 25386737 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.1553;AVGPOST=0.9957;RSQ=0.9866;ERATE=0.0006;THETA=0.0010;AC=340;AN=2184 GT:DS:GL:BD 0.15567766 0
1 25387099 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.857;LDAF=0.1265;AVGPOST=0.9914;RSQ=0.9717;ERATE=0.0007;THETA=0.0049;AC=280;AN=2184 GT:DS:GL:BD 0.12820514 0
1 25387133 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.756;LDAF=0.0026;AVGPOST=0.9976;RSQ=0.5809;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25387411 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.965;LDAF=0.1513;AVGPOST=0.9898;RSQ=0.9694;ERATE=0.0012;THETA=0.0010;AC=326;AN=2184 GT:DS:GL:BD 0.14926741 0
1 25387597 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0026;AVGPOST=0.9975;RSQ=0.6305;ERATE=0.0018;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25388110 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25388178 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7455;ERATE=0.0004;THETA=0.0022;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25388252 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0052;AVGPOST=0.9988;RSQ=0.9067;ERATE=0.0004;THETA=0.0054;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25388288 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0074;AVGPOST=0.9996;RSQ=0.9763;ERATE=0.0004;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 25388327 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6651;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25388468 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25388506 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6404;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25388636 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0179;AVGPOST=0.9982;RSQ=0.9629;ERATE=0.0004;THETA=0.0005;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 25388660 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0017;AVGPOST=0.9986;RSQ=0.7435;ERATE=0.0004;THETA=0.0020;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25388703 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9763;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25388880 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.6010;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25388918 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1307;AVGPOST=0.9969;RSQ=0.9899;ERATE=0.0006;THETA=0.0004;AC=286;AN=2184 GT:DS:GL:BD 0.13095239 0
1 25388949 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.685;LDAF=0.0030;AVGPOST=0.9986;RSQ=0.8065;ERATE=0.0004;THETA=0.0045;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25389015 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9164;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25389110 . AT A 140 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0061;AVGPOST=0.9989;RSQ=0.9211;ERATE=0.0005;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 25389112 . TA T 1339 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0059;AVGPOST=0.9995;RSQ=0.9708;ERATE=0.0003;THETA=0.0018;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 25389145 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0151;AVGPOST=0.9998;RSQ=0.9944;ERATE=0.0003;THETA=0.0050;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 25389146 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.744;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4631;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25389263 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.988;LDAF=0.8873;AVGPOST=0.9942;RSQ=0.9785;ERATE=0.0008;THETA=0.0003;AC=1940;AN=2184 GT:DS:GL:BD 0.88827837 1
1 25389367 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5900;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25389427 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25389445 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0055;AVGPOST=0.9993;RSQ=0.9560;ERATE=0.0003;THETA=0.0010;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 25389956 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0118;AVGPOST=0.9993;RSQ=0.9727;ERATE=0.0004;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 25389965 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.4665;ERATE=0.0004;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25389978 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5913;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25390030 . A AAAAAAT 922 PASS INDEL;BAVGPOST=0.997;BRSQ=0.839;LDAF=0.0140;AVGPOST=0.9861;RSQ=0.6313;ERATE=0.0024;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 25390048 . T TA 54 PASS INDEL;BAVGPOST=0.998;BRSQ=0.815;LDAF=0.0066;AVGPOST=0.9962;RSQ=0.7512;ERATE=0.0006;THETA=0.0039;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 25390148 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8319;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25390263 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6701;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25390272 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.703;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5407;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25390327 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9905;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 25390349 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=0.9997;RSQ=0.9448;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25390351 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0033;AVGPOST=0.9996;RSQ=0.9518;ERATE=0.0003;THETA=0.0011;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25390366 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0234;AVGPOST=0.9973;RSQ=0.9619;ERATE=0.0004;THETA=0.0010;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 25390415 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.777;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7543;ERATE=0.0004;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25390467 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9608;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25390473 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0033;AVGPOST=0.9969;RSQ=0.6518;ERATE=0.0019;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25390498 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7877;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25390509 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.827;LDAF=0.0047;AVGPOST=0.9977;RSQ=0.8214;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25390560 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0032;AVGPOST=0.9995;RSQ=0.9403;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25390604 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6878;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25390645 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0181;AVGPOST=0.9993;RSQ=0.9867;ERATE=0.0003;THETA=0.0007;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 25390712 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9858;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25390720 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.823;LDAF=0.0044;AVGPOST=0.9979;RSQ=0.8164;ERATE=0.0004;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25390721 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5646;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25390779 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5792;ERATE=0.0005;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25390827 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4060;AVGPOST=0.9954;RSQ=0.9935;ERATE=0.0005;THETA=0.0003;AC=884;AN=2184 GT:DS:GL:BD 0.40476191 0
1 25390938 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25390983 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0115;AVGPOST=0.9998;RSQ=0.9911;ERATE=0.0003;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 25391082 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8955;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25391222 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.8967;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25391233 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.916;LDAF=0.0077;AVGPOST=0.9983;RSQ=0.9242;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 25391265 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1625;AVGPOST=0.9979;RSQ=0.9939;ERATE=0.0005;THETA=0.0014;AC=355;AN=2184 GT:DS:GL:BD 0.16254579 0
1 25391294 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7309;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25391388 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0025;AVGPOST=0.9994;RSQ=0.9081;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25391398 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2538;AVGPOST=0.9957;RSQ=0.9910;ERATE=0.0010;THETA=0.0004;AC=550;AN=2184 GT:DS:GL:BD 0.25183150 0
1 25391511 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0022;AVGPOST=0.9981;RSQ=0.6647;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25391604 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2541;AVGPOST=0.9989;RSQ=0.9979;ERATE=0.0004;THETA=0.0003;AC=552;AN=2184 GT:DS:GL:BD 0.25274727 0
1 25391629 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1617;AVGPOST=0.9986;RSQ=0.9956;ERATE=0.0005;THETA=0.0003;AC=354;AN=2184 GT:DS:GL:BD 0.16208792 0
1 25391638 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.581;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4890;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25391649 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0706;AVGPOST=0.9986;RSQ=0.9912;ERATE=0.0004;THETA=0.0006;AC=153;AN=2184 GT:DS:GL:BD 0.07005495 0
1 25391670 . CCA C 22728 PASS INDEL;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.2336;AVGPOST=0.9959;RSQ=0.9910;ERATE=0.0005;THETA=0.0004;AC=508;AN=2184 GT:DS:GL:BD 0.23260073 0
1 25391750 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0116;AVGPOST=0.9995;RSQ=0.9791;ERATE=0.0003;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 25391751 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.816;LDAF=0.0097;AVGPOST=0.9976;RSQ=0.9018;ERATE=0.0005;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 25391752 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0083;AVGPOST=0.9999;RSQ=0.9947;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 25391781 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0023;AVGPOST=0.9983;RSQ=0.6966;ERATE=0.0005;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25391882 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25391948 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.848;LDAF=0.0036;AVGPOST=0.9980;RSQ=0.7672;ERATE=0.0006;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25392024 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.594;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4369;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25392069 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0032;AVGPOST=0.9982;RSQ=0.7863;ERATE=0.0005;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25392108 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.764;LDAF=0.0058;AVGPOST=0.9993;RSQ=0.9526;ERATE=0.0004;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 25392127 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1385;AVGPOST=0.9985;RSQ=0.9950;ERATE=0.0003;THETA=0.0005;AC=302;AN=2184 GT:DS:GL:BD 0.13827839 0
1 25392217 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9745;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25392253 . AG A 78 PASS INDEL;BAVGPOST=0.997;BRSQ=0.708;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8047;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25392295 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0614;AVGPOST=0.9986;RSQ=0.9912;ERATE=0.0004;THETA=0.0002;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 25392296 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0031;AVGPOST=0.9960;RSQ=0.5102;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25392312 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.865;LDAF=0.0061;AVGPOST=0.9965;RSQ=0.7822;ERATE=0.0009;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25392325 . CG C 199 PASS INDEL;BAVGPOST=0.998;BRSQ=0.902;LDAF=0.0082;AVGPOST=0.9960;RSQ=0.7781;ERATE=0.0009;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 25392326 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.771;LDAF=0.9677;AVGPOST=0.9668;RSQ=0.6063;ERATE=0.0019;THETA=0.0003;AC=2127;AN=2184 GT:DS:GL:BD 0.97390109 1
1 25392327 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.961;LDAF=0.1609;AVGPOST=0.9870;RSQ=0.9606;ERATE=0.0016;THETA=0.0004;AC=351;AN=2184 GT:DS:GL:BD 0.16071428 0
1 25392349 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.7966;ERATE=0.0005;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25392363 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0117;AVGPOST=0.9995;RSQ=0.9790;ERATE=0.0004;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 25392364 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2546;AVGPOST=0.9947;RSQ=0.9892;ERATE=0.0005;THETA=0.0003;AC=552;AN=2184 GT:DS:GL:BD 0.25274727 0
1 25392366 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0063;AVGPOST=0.9990;RSQ=0.9363;ERATE=0.0005;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 25392502 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.649;LDAF=0.0110;AVGPOST=0.9845;RSQ=0.4732;ERATE=0.0027;THETA=0.0027;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 25392827 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0067;AVGPOST=0.9979;RSQ=0.8819;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 25392838 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.425;LDAF=0.0021;AVGPOST=0.9966;RSQ=0.3245;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25392939 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.920;LDAF=0.0062;AVGPOST=0.9986;RSQ=0.9288;ERATE=0.0003;THETA=0.0001;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 25392972 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0099;AVGPOST=0.9984;RSQ=0.9392;ERATE=0.0004;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 25393004 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.988;LDAF=0.4397;AVGPOST=0.9837;RSQ=0.9733;ERATE=0.0028;THETA=0.0009;AC=958;AN=2184 GT:DS:GL:BD 0.43864468 0
1 25393017 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.561;LDAF=0.0059;AVGPOST=0.9927;RSQ=0.5278;ERATE=0.0008;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25393111 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8523;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25393154 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.855;LDAF=0.0040;AVGPOST=0.9971;RSQ=0.7331;ERATE=0.0003;THETA=0.0016;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25393328 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.531;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.6163;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25393329 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7063;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25393358 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5605;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25393392 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25393400 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.809;LDAF=0.0041;AVGPOST=0.9961;RSQ=0.7126;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25393466 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25393546 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.7467;AVGPOST=0.9947;RSQ=0.9899;ERATE=0.0012;THETA=0.0016;AC=1630;AN=2184 GT:DS:GL:BD 0.74633700 1
1 25393615 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0138;AVGPOST=0.9998;RSQ=0.9935;ERATE=0.0003;THETA=0.0002;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 25393661 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.687;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25393710 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25393747 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0061;AVGPOST=0.9996;RSQ=0.9758;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 25393800 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0050;AVGPOST=0.9992;RSQ=0.9258;ERATE=0.0006;THETA=0.0019;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25393816 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.7467;AVGPOST=0.9972;RSQ=0.9949;ERATE=0.0005;THETA=0.0006;AC=1628;AN=2184 GT:DS:GL:BD 0.74542123 1
1 25393937 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25394062 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25394213 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0051;AVGPOST=0.9989;RSQ=0.9142;ERATE=0.0004;THETA=0.0018;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25394260 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7759;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25394333 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.725;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25394374 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0053;AVGPOST=0.9950;RSQ=0.6574;ERATE=0.0007;THETA=0.0053;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25394379 rs11274915 C CCACGGTGGTTTT 44803 PASS INDEL;BAVGPOST=0.963;BRSQ=0.911;LDAF=0.2582;AVGPOST=0.9923;RSQ=0.9836;ERATE=0.0008;THETA=0.0067;AC=565;AN=2184 GT:DS:GL:BD 0.25869963 0
1 25394433 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8210;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25394751 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1611;AVGPOST=0.9984;RSQ=0.9952;ERATE=0.0004;THETA=0.0002;AC=352;AN=2184 GT:DS:GL:BD 0.16117217 0
1 25394753 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2568;AVGPOST=0.9957;RSQ=0.9917;ERATE=0.0006;THETA=0.0010;AC=562;AN=2184 GT:DS:GL:BD 0.25732601 0
1 25394785 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8321;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25394918 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0260;AVGPOST=0.9991;RSQ=0.9876;ERATE=0.0003;THETA=0.0004;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 25394923 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9451;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25394993 . GA G 579 PASS INDEL;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0043;AVGPOST=0.9994;RSQ=0.9324;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25394996 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8771;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25395045 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0034;AVGPOST=0.9971;RSQ=0.7675;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25395097 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5918;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25395105 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8829;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25395133 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4390;AVGPOST=0.9984;RSQ=0.9973;ERATE=0.0004;THETA=0.0004;AC=957;AN=2184 GT:DS:GL:BD 0.43818682 0
1 25395209 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2834;AVGPOST=0.9998;RSQ=0.9996;ERATE=0.0003;THETA=0.0004;AC=620;AN=2184 GT:DS:GL:BD 0.28388280 0
1 25395216 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25395230 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8474;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25395246 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0027;AVGPOST=0.9998;RSQ=0.9695;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25395272 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.976;LDAF=0.1986;AVGPOST=0.9912;RSQ=0.9807;ERATE=0.0004;THETA=0.0003;AC=433;AN=2184 GT:DS:GL:BD 0.19826007 0
1 25395273 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.984;LDAF=0.2678;AVGPOST=0.9900;RSQ=0.9837;ERATE=0.0017;THETA=0.0006;AC=587;AN=2184 GT:DS:GL:BD 0.26877290 0
1 25395286 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0023;AVGPOST=0.9983;RSQ=0.7257;ERATE=0.0011;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25395317 . CT C 7008 PASS INDEL;BAVGPOST=0.965;BRSQ=0.924;LDAF=0.2554;AVGPOST=0.9616;RSQ=0.9333;ERATE=0.0049;THETA=0.0003;AC=562;AN=2184 GT:DS:GL:BD 0.25732601 0
1 25395321 . CT C 26127 PASS INDEL;BAVGPOST=0.982;BRSQ=0.964;LDAF=0.2713;AVGPOST=0.9872;RSQ=0.9800;ERATE=0.0005;THETA=0.0005;AC=594;AN=2184 GT:DS:GL:BD 0.27197802 0
1 25395340 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.2803;AVGPOST=0.9943;RSQ=0.9906;ERATE=0.0006;THETA=0.0003;AC=616;AN=2184 GT:DS:GL:BD 0.28205130 0
1 25395351 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.987;LDAF=0.2136;AVGPOST=0.9970;RSQ=0.9931;ERATE=0.0005;THETA=0.0004;AC=470;AN=2184 GT:DS:GL:BD 0.21520147 0
1 25395389 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2832;AVGPOST=0.9994;RSQ=0.9988;ERATE=0.0004;THETA=0.0004;AC=620;AN=2184 GT:DS:GL:BD 0.28388280 0
1 25395427 . AT A 484 PASS INDEL;BAVGPOST=0.915;BRSQ=0.483;LDAF=0.0715;AVGPOST=0.9345;RSQ=0.6377;ERATE=0.0020;THETA=0.0004;AC=123;AN=2184 GT:DS:GL:BD 0.05631868 0
1 25395428 rs35335311 TG T 11873 PASS INDEL;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.2154;AVGPOST=0.9962;RSQ=0.9909;ERATE=0.0008;THETA=0.0004;AC=469;AN=2184 GT:DS:GL:BD 0.21474358 0
1 25395466 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5313;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25395503 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25395616 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0046;AVGPOST=0.9998;RSQ=0.9810;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25395636 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0042;AVGPOST=0.9996;RSQ=0.9615;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25395659 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0223;AVGPOST=0.9993;RSQ=0.9883;ERATE=0.0003;THETA=0.0011;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 25395738 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1337;AVGPOST=0.9987;RSQ=0.9952;ERATE=0.0005;THETA=0.0003;AC=292;AN=2184 GT:DS:GL:BD 0.13369964 0
1 25395745 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.765;LDAF=0.0051;AVGPOST=0.9984;RSQ=0.8656;ERATE=0.0006;THETA=0.0001;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25395759 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.6897;AVGPOST=0.9951;RSQ=0.9914;ERATE=0.0005;THETA=0.0004;AC=1506;AN=2184 GT:DS:GL:BD 0.68956041 1
1 25395795 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.936;LDAF=0.0199;AVGPOST=0.9991;RSQ=0.9806;ERATE=0.0004;THETA=0.0010;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 25395852 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1336;AVGPOST=0.9991;RSQ=0.9974;ERATE=0.0004;THETA=0.0003;AC=292;AN=2184 GT:DS:GL:BD 0.13369964 0
1 25395879 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2162;AVGPOST=0.9983;RSQ=0.9958;ERATE=0.0005;THETA=0.0002;AC=472;AN=2184 GT:DS:GL:BD 0.21611722 0
1 25395922 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1336;AVGPOST=0.9993;RSQ=0.9973;ERATE=0.0004;THETA=0.0003;AC=292;AN=2184 GT:DS:GL:BD 0.13369964 0
1 25395950 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1582;AVGPOST=0.9990;RSQ=0.9969;ERATE=0.0005;THETA=0.0003;AC=346;AN=2184 GT:DS:GL:BD 0.15842491 0
1 25396064 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0015;AVGPOST=0.9985;RSQ=0.5872;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25396075 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4798;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25396078 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5246;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25396122 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0039;AVGPOST=0.9982;RSQ=0.8148;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25396132 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.728;LDAF=0.0087;AVGPOST=0.9927;RSQ=0.6694;ERATE=0.0010;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 25396190 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.738;LDAF=0.0028;AVGPOST=0.9975;RSQ=0.6588;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25396311 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0436;AVGPOST=0.9982;RSQ=0.9823;ERATE=0.0003;THETA=0.0005;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 25396319 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0186;AVGPOST=0.9994;RSQ=0.9868;ERATE=0.0004;THETA=0.0003;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 25396437 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1335;AVGPOST=0.9991;RSQ=0.9967;ERATE=0.0005;THETA=0.0006;AC=292;AN=2184 GT:DS:GL:BD 0.13369964 0
1 25396460 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25396499 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8167;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25396528 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9334;ERATE=0.0003;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25396532 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.968;LDAF=0.0275;AVGPOST=0.9959;RSQ=0.9411;ERATE=0.0004;THETA=0.0004;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 25396616 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.7254;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25396769 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0065;AVGPOST=0.9990;RSQ=0.9415;ERATE=0.0004;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 25396833 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7207;AVGPOST=0.9994;RSQ=0.9985;ERATE=0.0004;THETA=0.0004;AC=1574;AN=2184 GT:DS:GL:BD 0.72069597 1
1 25396898 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1332;AVGPOST=0.9992;RSQ=0.9972;ERATE=0.0003;THETA=0.0003;AC=292;AN=2184 GT:DS:GL:BD 0.13369964 0
1 25396905 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.2163;AVGPOST=0.9977;RSQ=0.9943;ERATE=0.0005;THETA=0.0005;AC=474;AN=2184 GT:DS:GL:BD 0.21703297 0
1 25396966 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5790;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25396997 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8136;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25397050 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4348;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25397198 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8696;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25397266 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1327;AVGPOST=0.9986;RSQ=0.9951;ERATE=0.0007;THETA=0.0005;AC=289;AN=2184 GT:DS:GL:BD 0.13232601 0
1 25397285 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0263;AVGPOST=0.9986;RSQ=0.9803;ERATE=0.0003;THETA=0.0009;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 25397349 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.2164;AVGPOST=0.9990;RSQ=0.9976;ERATE=0.0005;THETA=0.0003;AC=473;AN=2184 GT:DS:GL:BD 0.21657509 0
1 25397354 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8374;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25397422 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0041;AVGPOST=0.9998;RSQ=0.9741;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25397424 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.8958;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25397444 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.740;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25397466 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5332;AVGPOST=0.9989;RSQ=0.9980;ERATE=0.0005;THETA=0.0003;AC=1164;AN=2184 GT:DS:GL:BD 0.53296703 1
1 25397472 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.947;LDAF=0.0348;AVGPOST=0.9977;RSQ=0.9755;ERATE=0.0003;THETA=0.0004;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 25397507 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0189;AVGPOST=0.9992;RSQ=0.9829;ERATE=0.0003;THETA=0.0005;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 25397530 rs10647284 C CTG 74590 PASS INDEL;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.5682;AVGPOST=0.9947;RSQ=0.9915;ERATE=0.0007;THETA=0.0002;AC=1240;AN=2184 GT:DS:GL:BD 0.56776559 1
1 25397531 rs34781388 T TGC 34436 PASS INDEL;BAVGPOST=0.993;BRSQ=0.987;LDAF=0.5652;AVGPOST=0.9865;RSQ=0.9779;ERATE=0.0033;THETA=0.0003;AC=1236;AN=2184 GT:DS:GL:BD 0.56593406 1
1 25397612 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.5541;AVGPOST=0.9976;RSQ=0.9959;ERATE=0.0006;THETA=0.0006;AC=1209;AN=2184 GT:DS:GL:BD 0.55357140 1
1 25397707 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5635;AVGPOST=0.9994;RSQ=0.9988;ERATE=0.0005;THETA=0.0003;AC=1230;AN=2184 GT:DS:GL:BD 0.56318682 1
1 25397714 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5636;AVGPOST=0.9991;RSQ=0.9985;ERATE=0.0004;THETA=0.0005;AC=1230;AN=2184 GT:DS:GL:BD 0.56318682 1
1 25397748 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0219;AVGPOST=0.9991;RSQ=0.9827;ERATE=0.0004;THETA=0.0007;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 25397774 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2583;AVGPOST=0.9980;RSQ=0.9958;ERATE=0.0004;THETA=0.0005;AC=561;AN=2184 GT:DS:GL:BD 0.25686812 0
1 25397887 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6686;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25397888 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5307;AVGPOST=0.9969;RSQ=0.9952;ERATE=0.0007;THETA=0.0007;AC=1158;AN=2184 GT:DS:GL:BD 0.53021979 1
1 25397967 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5635;AVGPOST=0.9982;RSQ=0.9969;ERATE=0.0005;THETA=0.0018;AC=1231;AN=2184 GT:DS:GL:BD 0.56364471 1
1 25398042 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0220;AVGPOST=0.9989;RSQ=0.9818;ERATE=0.0005;THETA=0.0005;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 25398075 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5632;AVGPOST=0.9962;RSQ=0.9943;ERATE=0.0006;THETA=0.0007;AC=1230;AN=2184 GT:DS:GL:BD 0.56318682 1
1 25398093 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.5256;AVGPOST=0.9959;RSQ=0.9932;ERATE=0.0006;THETA=0.0002;AC=1148;AN=2184 GT:DS:GL:BD 0.52564102 1
1 25398100 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0044;AVGPOST=0.9986;RSQ=0.8955;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25398139 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5622;AVGPOST=0.9956;RSQ=0.9936;ERATE=0.0004;THETA=0.0002;AC=1227;AN=2184 GT:DS:GL:BD 0.56181318 1
1 25398157 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0175;AVGPOST=0.9969;RSQ=0.9412;ERATE=0.0005;THETA=0.0009;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 25398174 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5788;AVGPOST=0.9982;RSQ=0.9972;ERATE=0.0004;THETA=0.0003;AC=1263;AN=2184 GT:DS:GL:BD 0.57829672 1
1 25398206 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.5636;AVGPOST=0.9950;RSQ=0.9919;ERATE=0.0007;THETA=0.0004;AC=1229;AN=2184 GT:DS:GL:BD 0.56272894 1
1 25398256 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6567;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25398372 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.962;BRSQ=0.922;LDAF=0.4851;AVGPOST=0.9417;RSQ=0.9075;ERATE=0.0200;THETA=0.0003;AC=1079;AN=2184 GT:DS:GL:BD 0.49404761 0
1 25398411 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7393;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25398478 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1571;AVGPOST=0.9983;RSQ=0.9953;ERATE=0.0005;THETA=0.0005;AC=342;AN=2184 GT:DS:GL:BD 0.15659341 0
1 25398545 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0065;AVGPOST=0.9999;RSQ=0.9898;ERATE=0.0003;THETA=0.0011;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 25398617 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25398662 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4880;ERATE=0.0004;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25398688 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1568;AVGPOST=0.9992;RSQ=0.9974;ERATE=0.0004;THETA=0.0011;AC=343;AN=2184 GT:DS:GL:BD 0.15705128 0
1 25398733 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9891;ERATE=0.0003;THETA=0.0010;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 25398772 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7153;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25398808 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6371;ERATE=0.0004;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25398829 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5790;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25398903 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1569;AVGPOST=0.9995;RSQ=0.9982;ERATE=0.0004;THETA=0.0037;AC=343;AN=2184 GT:DS:GL:BD 0.15705128 0
1 25398907 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8188;ERATE=0.0005;THETA=0.0021;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25399018 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0037;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25399089 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.948;LDAF=0.1920;AVGPOST=0.9863;RSQ=0.9675;ERATE=0.0009;THETA=0.0117;AC=418;AN=2184 GT:DS:GL:BD 0.19139194 0
1 25399202 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7861;ERATE=0.0003;THETA=0.0068;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25399237 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0149;AVGPOST=0.9951;RSQ=0.8606;ERATE=0.0007;THETA=0.0070;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 25399304 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.781;LDAF=0.0017;AVGPOST=0.9986;RSQ=0.6365;ERATE=0.0006;THETA=0.0035;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25399335 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0132;AVGPOST=0.9978;RSQ=0.9476;ERATE=0.0005;THETA=0.0009;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 25399399 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0032;AVGPOST=0.9992;RSQ=0.8983;ERATE=0.0005;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25399474 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.971;LDAF=0.4611;AVGPOST=0.9840;RSQ=0.9785;ERATE=0.0010;THETA=0.0144;AC=1008;AN=2184 GT:DS:GL:BD 0.46153846 0
1 25399578 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.593;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5466;ERATE=0.0004;THETA=0.0096;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25399669 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.947;LDAF=0.1968;AVGPOST=0.9633;RSQ=0.9137;ERATE=0.0105;THETA=0.0105;AC=413;AN=2184 GT:DS:GL:BD 0.18910256 0
1 25399737 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.886;LDAF=0.0449;AVGPOST=0.9818;RSQ=0.8532;ERATE=0.0018;THETA=0.0125;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 25399781 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.945;BRSQ=0.901;LDAF=0.5778;AVGPOST=0.9430;RSQ=0.9131;ERATE=0.0062;THETA=0.0019;AC=1268;AN=2184 GT:DS:GL:BD 0.58058608 1
1 25399846 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.752;LDAF=0.0022;AVGPOST=0.9991;RSQ=0.8094;ERATE=0.0005;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25399926 . T TA 361 PASS INDEL;BAVGPOST=0.995;BRSQ=0.612;LDAF=0.0137;AVGPOST=0.9834;RSQ=0.5154;ERATE=0.0030;THETA=0.0054;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 25399927 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8010;ERATE=0.0004;THETA=0.0088;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25399936 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.909;LDAF=0.0142;AVGPOST=0.9974;RSQ=0.9260;ERATE=0.0006;THETA=0.0077;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 25399980 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8670;ERATE=0.0003;THETA=0.0119;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25399985 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0093;AVGPOST=0.9995;RSQ=0.9811;ERATE=0.0003;THETA=0.0058;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 25400187 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7659;ERATE=0.0004;THETA=0.0052;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25400247 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25400269 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0160;AVGPOST=0.9987;RSQ=0.9733;ERATE=0.0004;THETA=0.0034;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 25400313 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6707;ERATE=0.0004;THETA=0.0039;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25400316 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0144;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25400361 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8424;ERATE=0.0004;THETA=0.0078;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25400401 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.975;LDAF=0.0668;AVGPOST=0.9973;RSQ=0.9844;ERATE=0.0005;THETA=0.0010;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 25400468 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7641;ERATE=0.0004;THETA=0.0028;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25400500 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6010;ERATE=0.0004;THETA=0.0072;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25400592 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1859;AVGPOST=0.9965;RSQ=0.9908;ERATE=0.0005;THETA=0.0019;AC=407;AN=2184 GT:DS:GL:BD 0.18635531 0
1 25400627 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1331;AVGPOST=0.9964;RSQ=0.9870;ERATE=0.0006;THETA=0.0070;AC=290;AN=2184 GT:DS:GL:BD 0.13278389 0
1 25400675 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2450;AVGPOST=0.9987;RSQ=0.9971;ERATE=0.0004;THETA=0.0011;AC=535;AN=2184 GT:DS:GL:BD 0.24496336 0
1 25400690 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.865;LDAF=0.0097;AVGPOST=0.9976;RSQ=0.9028;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 25400732 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8410;ERATE=0.0003;THETA=0.0026;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25400812 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0855;AVGPOST=0.9986;RSQ=0.9930;ERATE=0.0003;THETA=0.0003;AC=186;AN=2184 GT:DS:GL:BD 0.08516484 0
1 25400892 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.962;LDAF=0.0168;AVGPOST=0.9988;RSQ=0.9713;ERATE=0.0005;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 25400898 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25401021 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.638;LDAF=0.0297;AVGPOST=0.9692;RSQ=0.5772;ERATE=0.0073;THETA=0.0007;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 25401025 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.854;LDAF=0.1149;AVGPOST=0.9693;RSQ=0.8833;ERATE=0.0083;THETA=0.0005;AC=231;AN=2184 GT:DS:GL:BD 0.10576923 0
1 25401050 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.979;LDAF=0.0098;AVGPOST=0.9988;RSQ=0.9500;ERATE=0.0004;THETA=0.0013;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 25401055 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25401119 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6464;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25401170 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0051;AVGPOST=0.9990;RSQ=0.9176;ERATE=0.0004;THETA=0.0012;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25401192 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0155;AVGPOST=0.9992;RSQ=0.9810;ERATE=0.0004;THETA=0.0010;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 25401195 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0136;AVGPOST=0.9995;RSQ=0.9871;ERATE=0.0003;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 25401220 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9321;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25401246 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25401432 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5948;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25401437 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6384;AVGPOST=0.9973;RSQ=0.9956;ERATE=0.0004;THETA=0.0002;AC=1396;AN=2184 GT:DS:GL:BD 0.63919413 1
1 25401459 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.6388;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25401492 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.986;LDAF=0.2880;AVGPOST=0.9964;RSQ=0.9928;ERATE=0.0006;THETA=0.0004;AC=629;AN=2184 GT:DS:GL:BD 0.28800365 0
1 25401499 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.938;LDAF=0.0079;AVGPOST=0.9972;RSQ=0.8668;ERATE=0.0004;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 25401508 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.739;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25401517 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.737;LDAF=0.0035;AVGPOST=0.9981;RSQ=0.7748;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25401526 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.983;LDAF=0.0334;AVGPOST=0.9985;RSQ=0.9825;ERATE=0.0005;THETA=0.0006;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 25401560 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5055;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25401568 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.2325;AVGPOST=0.9968;RSQ=0.9936;ERATE=0.0006;THETA=0.0001;AC=506;AN=2184 GT:DS:GL:BD 0.23168498 0
1 25401579 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0261;AVGPOST=0.9989;RSQ=0.9873;ERATE=0.0003;THETA=0.0007;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 25401633 . TG T 15710 PASS INDEL;BAVGPOST=0.967;BRSQ=0.937;LDAF=0.6066;AVGPOST=0.9369;RSQ=0.9013;ERATE=0.0164;THETA=0.0003;AC=1343;AN=2184 GT:DS:GL:BD 0.61492676 1
1 25401634 rs11293360 GT G 57805 PASS INDEL;BAVGPOST=0.982;BRSQ=0.966;LDAF=0.6386;AVGPOST=0.9950;RSQ=0.9919;ERATE=0.0005;THETA=0.0006;AC=1396;AN=2184 GT:DS:GL:BD 0.63919413 1
1 25401726 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2899;AVGPOST=0.9966;RSQ=0.9932;ERATE=0.0005;THETA=0.0003;AC=633;AN=2184 GT:DS:GL:BD 0.28983516 0
1 25401760 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2323;AVGPOST=0.9980;RSQ=0.9964;ERATE=0.0004;THETA=0.0025;AC=506;AN=2184 GT:DS:GL:BD 0.23168498 0
1 25401779 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8538;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25401785 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2396;AVGPOST=0.9983;RSQ=0.9964;ERATE=0.0005;THETA=0.0002;AC=521;AN=2184 GT:DS:GL:BD 0.23855311 0
1 25401850 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6401;AVGPOST=0.9974;RSQ=0.9952;ERATE=0.0007;THETA=0.0004;AC=1396;AN=2184 GT:DS:GL:BD 0.63919413 1
1 25401876 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.717;LDAF=0.0031;AVGPOST=0.9975;RSQ=0.6838;ERATE=0.0006;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25401918 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.949;LDAF=0.2545;AVGPOST=0.9907;RSQ=0.9801;ERATE=0.0006;THETA=0.0004;AC=556;AN=2184 GT:DS:GL:BD 0.25457877 0
1 25402018 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.6418;AVGPOST=0.9957;RSQ=0.9923;ERATE=0.0007;THETA=0.0004;AC=1400;AN=2184 GT:DS:GL:BD 0.64102566 1
1 25402035 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.942;LDAF=0.0085;AVGPOST=0.9973;RSQ=0.8641;ERATE=0.0004;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 25402104 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2951;AVGPOST=0.9907;RSQ=0.9831;ERATE=0.0010;THETA=0.0001;AC=641;AN=2184 GT:DS:GL:BD 0.29349816 0
1 25402143 . T TA 32 PASS INDEL;BAVGPOST=0.999;BRSQ=0.735;LDAF=0.0067;AVGPOST=0.9929;RSQ=0.6036;ERATE=0.0008;THETA=0.0001;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25402144 . C CAATAAT 4460 PASS INDEL;BAVGPOST=0.986;BRSQ=0.781;LDAF=0.0340;AVGPOST=0.9875;RSQ=0.8517;ERATE=0.0014;THETA=0.0002;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 25402171 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.899;LDAF=0.0026;AVGPOST=0.9987;RSQ=0.8145;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25402190 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0107;AVGPOST=0.9985;RSQ=0.9558;ERATE=0.0003;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 25402245 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9545;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25402272 . AG A 209 PASS INDEL;BAVGPOST=0.999;BRSQ=0.707;LDAF=0.0023;AVGPOST=0.9979;RSQ=0.6981;ERATE=0.0004;THETA=0.0027;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25402339 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1158;AVGPOST=0.9985;RSQ=0.9936;ERATE=0.0005;THETA=0.0003;AC=252;AN=2184 GT:DS:GL:BD 0.11538462 0
1 25402419 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25402517 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8480;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25402576 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.974;LDAF=0.0145;AVGPOST=0.9991;RSQ=0.9730;ERATE=0.0003;THETA=0.0007;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 25402611 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2443;AVGPOST=0.9990;RSQ=0.9977;ERATE=0.0004;THETA=0.0003;AC=532;AN=2184 GT:DS:GL:BD 0.24358974 0
1 25402624 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3603;AVGPOST=0.9992;RSQ=0.9986;ERATE=0.0004;THETA=0.0003;AC=786;AN=2184 GT:DS:GL:BD 0.35989010 0
1 25402657 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.7762;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25402705 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2475;AVGPOST=0.9993;RSQ=0.9985;ERATE=0.0004;THETA=0.0002;AC=539;AN=2184 GT:DS:GL:BD 0.24679486 0
1 25402848 . G GA 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.771;LDAF=0.0021;AVGPOST=0.9978;RSQ=0.6243;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25402880 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5337;AVGPOST=0.9988;RSQ=0.9980;ERATE=0.0004;THETA=0.0002;AC=1168;AN=2184 GT:DS:GL:BD 0.53479856 1
1 25402942 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7114;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25402957 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25403020 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25403027 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25403191 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3606;AVGPOST=0.9975;RSQ=0.9956;ERATE=0.0008;THETA=0.0002;AC=786;AN=2184 GT:DS:GL:BD 0.35989010 0
1 25403213 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0162;AVGPOST=0.9993;RSQ=0.9829;ERATE=0.0003;THETA=0.0008;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 25403231 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0028;AVGPOST=0.9969;RSQ=0.6090;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25403232 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8923;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25403320 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.751;LDAF=0.0020;AVGPOST=0.9983;RSQ=0.6439;ERATE=0.0006;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25403321 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0032;AVGPOST=0.9979;RSQ=0.6934;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25403325 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0045;AVGPOST=0.9992;RSQ=0.9203;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25403405 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.8931;AVGPOST=0.9985;RSQ=0.9941;ERATE=0.0005;THETA=0.0003;AC=1952;AN=2184 GT:DS:GL:BD 0.89377290 1
1 25403457 rs3085917 TAAAC T 31957 PASS INDEL;BAVGPOST=0.993;BRSQ=0.990;LDAF=0.2890;AVGPOST=0.9967;RSQ=0.9924;ERATE=0.0010;THETA=0.0003;AC=632;AN=2184 GT:DS:GL:BD 0.28937730 0
1 25403473 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0034;AVGPOST=0.9979;RSQ=0.7496;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25403532 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.704;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6237;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25403706 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0060;AVGPOST=0.9997;RSQ=0.9787;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 25403783 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.2888;AVGPOST=0.9992;RSQ=0.9982;ERATE=0.0004;THETA=0.0002;AC=632;AN=2184 GT:DS:GL:BD 0.28937730 0
1 25403885 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.5339;AVGPOST=0.9992;RSQ=0.9987;ERATE=0.0005;THETA=0.0004;AC=1168;AN=2184 GT:DS:GL:BD 0.53479856 1
1 25403930 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5338;AVGPOST=0.9992;RSQ=0.9987;ERATE=0.0004;THETA=0.0004;AC=1168;AN=2184 GT:DS:GL:BD 0.53479856 1
1 25403934 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25404008 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5339;AVGPOST=0.9979;RSQ=0.9967;ERATE=0.0005;THETA=0.0003;AC=1168;AN=2184 GT:DS:GL:BD 0.53479856 1
1 25404030 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5330;AVGPOST=0.9978;RSQ=0.9969;ERATE=0.0004;THETA=0.0003;AC=1165;AN=2184 GT:DS:GL:BD 0.53342491 1
1 25404038 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.871;LDAF=0.0057;AVGPOST=0.9969;RSQ=0.8030;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25404088 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5334;AVGPOST=0.9988;RSQ=0.9982;ERATE=0.0004;THETA=0.0002;AC=1168;AN=2184 GT:DS:GL:BD 0.53479856 1
1 25404098 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2443;AVGPOST=0.9973;RSQ=0.9946;ERATE=0.0005;THETA=0.0004;AC=532;AN=2184 GT:DS:GL:BD 0.24358974 0
1 25404109 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2457;AVGPOST=0.9956;RSQ=0.9916;ERATE=0.0007;THETA=0.0003;AC=533;AN=2184 GT:DS:GL:BD 0.24404761 0
1 25404110 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.749;LDAF=0.0030;AVGPOST=0.9982;RSQ=0.7400;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25404166 . AAAG A 188 PASS INDEL;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5736;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25404173 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25404250 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1258;AVGPOST=0.9994;RSQ=0.9975;ERATE=0.0004;THETA=0.0003;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 25404253 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0081;AVGPOST=0.9993;RSQ=0.9589;ERATE=0.0004;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 25404354 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.656;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4989;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25404448 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1152;AVGPOST=0.9962;RSQ=0.9869;ERATE=0.0006;THETA=0.0004;AC=250;AN=2184 GT:DS:GL:BD 0.11446887 0
1 25404497 . AAAAAATAAAAAT A 23289 PASS INDEL;BAVGPOST=0.978;BRSQ=0.954;LDAF=0.2869;AVGPOST=0.9899;RSQ=0.9781;ERATE=0.0013;THETA=0.0003;AC=626;AN=2184 GT:DS:GL:BD 0.28663003 0
1 25404502 rs68126305 AT A 5764 PASS INDEL;BAVGPOST=0.880;BRSQ=0.701;LDAF=0.2340;AVGPOST=0.8392;RSQ=0.6635;ERATE=0.0190;THETA=0.0002;AC=433;AN=2184 GT:DS:GL:BD 0.19826007 0
1 25404530 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0067;AVGPOST=0.9957;RSQ=0.7185;ERATE=0.0013;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25404638 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0064;AVGPOST=0.9989;RSQ=0.9234;ERATE=0.0004;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 25404673 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0025;AVGPOST=0.9979;RSQ=0.6630;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25404785 . ATG A 18 PASS INDEL;BAVGPOST=1.000;BRSQ=0.712;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.4017;ERATE=0.0006;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25404979 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.621;LDAF=0.0022;AVGPOST=0.9990;RSQ=0.8400;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25404987 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9570;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25405006 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0067;AVGPOST=0.9990;RSQ=0.9410;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 25405012 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0596;AVGPOST=0.9988;RSQ=0.9906;ERATE=0.0005;THETA=0.0003;AC=129;AN=2184 GT:DS:GL:BD 0.05906593 0
1 25405106 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5327;AVGPOST=0.9967;RSQ=0.9946;ERATE=0.0007;THETA=0.0003;AC=1167;AN=2184 GT:DS:GL:BD 0.53434068 1
1 25405207 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7862;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25405237 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.971;LDAF=0.0314;AVGPOST=0.9979;RSQ=0.9759;ERATE=0.0003;THETA=0.0005;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 25405252 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.0592;AVGPOST=0.9992;RSQ=0.9935;ERATE=0.0004;THETA=0.0005;AC=129;AN=2184 GT:DS:GL:BD 0.05906593 0
1 25405287 . GGT G 22 PASS INDEL;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0010;AVGPOST=0.9986;RSQ=0.3954;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25405340 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.740;LDAF=0.0023;AVGPOST=0.9979;RSQ=0.5885;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25405383 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.838;LDAF=0.0299;AVGPOST=0.9901;RSQ=0.8783;ERATE=0.0011;THETA=0.0006;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 25405386 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.892;LDAF=0.0048;AVGPOST=0.9985;RSQ=0.8739;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25405439 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0116;AVGPOST=0.9957;RSQ=0.8638;ERATE=0.0006;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 25405576 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25405596 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8981;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25405674 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0037;AVGPOST=0.9987;RSQ=0.8477;ERATE=0.0005;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25405679 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0024;AVGPOST=0.9994;RSQ=0.8893;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25405708 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.988;LDAF=0.1251;AVGPOST=0.9976;RSQ=0.9914;ERATE=0.0006;THETA=0.0003;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 25405809 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1206;AVGPOST=0.9972;RSQ=0.9905;ERATE=0.0009;THETA=0.0004;AC=263;AN=2184 GT:DS:GL:BD 0.12042125 0
1 25405881 . AT A 162 PASS INDEL;BAVGPOST=0.683;BRSQ=0.104;LDAF=0.1731;AVGPOST=0.7984;RSQ=0.4067;ERATE=0.0172;THETA=0.0006;AC=243;AN=2184 GT:DS:GL:BD 0.11126374 0
1 25405882 rs11349193 TA T 29628 PASS INDEL;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.5343;AVGPOST=0.9915;RSQ=0.9878;ERATE=0.0012;THETA=0.0005;AC=1167;AN=2184 GT:DS:GL:BD 0.53434068 1
1 25405908 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.6104;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25405969 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5545;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25406003 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0232;AVGPOST=0.9991;RSQ=0.9834;ERATE=0.0004;THETA=0.0003;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 25406109 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0049;AVGPOST=0.9992;RSQ=0.9123;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25406113 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8941;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25406143 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0048;AVGPOST=0.9990;RSQ=0.9108;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25406207 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0034;AVGPOST=0.9993;RSQ=0.9128;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25406225 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0072;AVGPOST=0.9978;RSQ=0.8765;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 25406259 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.727;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.6955;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25406378 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5736;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25406434 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0018;AVGPOST=0.9979;RSQ=0.5028;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25406459 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0064;AVGPOST=0.9994;RSQ=0.9649;ERATE=0.0003;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 25406569 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.975;LDAF=0.2902;AVGPOST=0.9954;RSQ=0.9915;ERATE=0.0010;THETA=0.0003;AC=634;AN=2184 GT:DS:GL:BD 0.29029304 0
1 25406674 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4370;AVGPOST=0.9950;RSQ=0.9918;ERATE=0.0008;THETA=0.0002;AC=953;AN=2184 GT:DS:GL:BD 0.43635532 0
1 25406748 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0064;AVGPOST=0.9991;RSQ=0.9490;ERATE=0.0004;THETA=0.0017;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 25406801 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0093;AVGPOST=0.9989;RSQ=0.9541;ERATE=0.0004;THETA=0.0001;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 25406829 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0025;AVGPOST=0.9981;RSQ=0.6899;ERATE=0.0016;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25406857 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1255;AVGPOST=0.9994;RSQ=0.9979;ERATE=0.0003;THETA=0.0002;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 25407006 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2883;AVGPOST=0.9987;RSQ=0.9971;ERATE=0.0004;THETA=0.0002;AC=632;AN=2184 GT:DS:GL:BD 0.28937730 0
1 25407113 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0015;AVGPOST=0.9990;RSQ=0.7253;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25407137 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9351;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25407227 . G GT 20 PASS INDEL;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5571;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25407321 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2883;AVGPOST=0.9989;RSQ=0.9976;ERATE=0.0005;THETA=0.0003;AC=631;AN=2184 GT:DS:GL:BD 0.28891942 0
1 25407329 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0117;AVGPOST=0.9994;RSQ=0.9759;ERATE=0.0003;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 25407334 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2885;AVGPOST=0.9991;RSQ=0.9981;ERATE=0.0003;THETA=0.0001;AC=632;AN=2184 GT:DS:GL:BD 0.28937730 0
1 25407360 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0165;AVGPOST=0.9998;RSQ=0.9951;ERATE=0.0003;THETA=0.0005;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 25407406 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0037;AVGPOST=0.9997;RSQ=0.9652;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25407474 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0064;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 25407485 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5979;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25407619 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8625;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25407796 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=1.0000;RSQ=0.9966;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 25407852 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8517;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25407854 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1262;AVGPOST=0.9990;RSQ=0.9973;ERATE=0.0003;THETA=0.0004;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 25407933 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0592;AVGPOST=0.9995;RSQ=0.9966;ERATE=0.0003;THETA=0.0004;AC=129;AN=2184 GT:DS:GL:BD 0.05906593 0
1 25407943 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5333;AVGPOST=0.9979;RSQ=0.9967;ERATE=0.0005;THETA=0.0003;AC=1168;AN=2184 GT:DS:GL:BD 0.53479856 1
1 25407952 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0266;AVGPOST=0.9996;RSQ=0.9942;ERATE=0.0004;THETA=0.0003;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 25408111 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9532;ERATE=0.0004;THETA=0.0012;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25408217 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0166;AVGPOST=0.9997;RSQ=0.9927;ERATE=0.0003;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 25408232 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0459;AVGPOST=0.9995;RSQ=0.9956;ERATE=0.0003;THETA=0.0005;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 25408315 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.797;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25408332 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0045;AVGPOST=0.9996;RSQ=0.9617;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25408385 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25408433 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.988;LDAF=0.5221;AVGPOST=0.9963;RSQ=0.9950;ERATE=0.0007;THETA=0.0005;AC=1144;AN=2184 GT:DS:GL:BD 0.52380955 1
1 25408465 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.988;LDAF=0.5152;AVGPOST=0.9920;RSQ=0.9892;ERATE=0.0069;THETA=0.0005;AC=1129;AN=2184 GT:DS:GL:BD 0.51694137 1
1 25408513 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0179;AVGPOST=0.9998;RSQ=0.9950;ERATE=0.0003;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 25408519 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.979;LDAF=0.4952;AVGPOST=0.9826;RSQ=0.9777;ERATE=0.0191;THETA=0.0002;AC=1085;AN=2184 GT:DS:GL:BD 0.49679488 0
1 25408667 . GC G 2931 PASS INDEL;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0118;AVGPOST=0.9979;RSQ=0.9379;ERATE=0.0004;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 25408668 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.1129;AVGPOST=0.9974;RSQ=0.9912;ERATE=0.0004;THETA=0.0004;AC=246;AN=2184 GT:DS:GL:BD 0.11263736 0
1 25408685 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0547;AVGPOST=0.9995;RSQ=0.9962;ERATE=0.0003;THETA=0.0002;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 25408711 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0092;AVGPOST=1.0000;RSQ=0.9976;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 25408773 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0072;AVGPOST=0.9986;RSQ=0.9199;ERATE=0.0004;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 25408784 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0165;AVGPOST=0.9999;RSQ=0.9976;ERATE=0.0003;THETA=0.0020;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 25408795 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9546;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25408838 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5938;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25408852 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25408928 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.5229;AVGPOST=0.9960;RSQ=0.9943;ERATE=0.0005;THETA=0.0004;AC=1147;AN=2184 GT:DS:GL:BD 0.52518314 1
1 25408943 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.5129;AVGPOST=0.9939;RSQ=0.9910;ERATE=0.0006;THETA=0.0003;AC=1126;AN=2184 GT:DS:GL:BD 0.51556778 1
1 25408986 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0069;AVGPOST=0.9994;RSQ=0.9604;ERATE=0.0003;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 25408999 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0136;AVGPOST=0.9992;RSQ=0.9777;ERATE=0.0003;THETA=0.0007;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 25409018 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8096;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25409035 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0042;AVGPOST=0.9982;RSQ=0.8231;ERATE=0.0005;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25409045 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.882;LDAF=0.0073;AVGPOST=0.9981;RSQ=0.9045;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 25409052 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7064;ERATE=0.0006;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25409063 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.5379;AVGPOST=0.9937;RSQ=0.9904;ERATE=0.0011;THETA=0.0002;AC=1178;AN=2184 GT:DS:GL:BD 0.53937727 1
1 25409135 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.711;LDAF=0.0027;AVGPOST=0.9987;RSQ=0.8151;ERATE=0.0004;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25409154 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9317;ERATE=0.0005;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25409168 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0095;AVGPOST=0.9994;RSQ=0.9697;ERATE=0.0004;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 25409242 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7176;ERATE=0.0007;THETA=0.0022;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25409256 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.983;LDAF=0.2282;AVGPOST=0.9939;RSQ=0.9863;ERATE=0.0004;THETA=0.0003;AC=498;AN=2184 GT:DS:GL:BD 0.22802198 0
1 25409305 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0125;AVGPOST=0.9965;RSQ=0.8910;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 25409319 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.978;LDAF=0.0396;AVGPOST=0.9910;RSQ=0.9062;ERATE=0.0016;THETA=0.0002;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 25409328 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.949;LDAF=0.0207;AVGPOST=0.9917;RSQ=0.8544;ERATE=0.0004;THETA=0.0002;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 25409342 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.958;LDAF=0.0138;AVGPOST=0.9952;RSQ=0.8503;ERATE=0.0009;THETA=0.0034;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 25409347 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.494;LDAF=0.0014;AVGPOST=0.9979;RSQ=0.3630;ERATE=0.0008;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25409442 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1259;AVGPOST=0.9974;RSQ=0.9903;ERATE=0.0004;THETA=0.0004;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 25409595 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0114;AVGPOST=0.9959;RSQ=0.8743;ERATE=0.0005;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 25409600 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.930;LDAF=0.0088;AVGPOST=0.9965;RSQ=0.8650;ERATE=0.0005;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 25409607 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.5348;AVGPOST=0.9951;RSQ=0.9924;ERATE=0.0007;THETA=0.0019;AC=1171;AN=2184 GT:DS:GL:BD 0.53617215 1
1 25409642 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0341;AVGPOST=0.9967;RSQ=0.9585;ERATE=0.0006;THETA=0.0004;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 25409865 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0031;AVGPOST=0.9989;RSQ=0.8911;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25409895 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25409942 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0070;AVGPOST=0.9987;RSQ=0.9280;ERATE=0.0003;THETA=0.0008;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 25409943 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.776;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.7822;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25410211 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9732;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25410307 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0065;AVGPOST=0.9997;RSQ=0.9798;ERATE=0.0004;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 25410320 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0060;AVGPOST=0.9981;RSQ=0.8926;ERATE=0.0004;THETA=0.0049;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25410430 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0073;AVGPOST=0.9974;RSQ=0.8764;ERATE=0.0004;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 25410517 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0068;AVGPOST=0.9952;RSQ=0.7397;ERATE=0.0007;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25410930 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0119;AVGPOST=0.9998;RSQ=0.9936;ERATE=0.0003;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 25411089 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5068;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25411276 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0049;AVGPOST=0.9989;RSQ=0.9239;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25411338 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0038;AVGPOST=0.9998;RSQ=0.9710;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25411353 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0034;AVGPOST=0.9989;RSQ=0.8969;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25411434 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9335;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25411654 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4939;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25411681 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0023;AVGPOST=0.9994;RSQ=0.8970;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25411729 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0330;AVGPOST=0.9997;RSQ=0.9960;ERATE=0.0003;THETA=0.0003;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 25411790 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2402;AVGPOST=0.9956;RSQ=0.9907;ERATE=0.0005;THETA=0.0004;AC=520;AN=2184 GT:DS:GL:BD 0.23809524 0
1 25411940 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0160;AVGPOST=0.9999;RSQ=0.9962;ERATE=0.0003;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 25411955 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0047;AVGPOST=0.9989;RSQ=0.8983;ERATE=0.0003;THETA=0.0019;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25412068 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25412098 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25412143 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0092;AVGPOST=0.9999;RSQ=0.9928;ERATE=0.0003;THETA=0.0011;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 25412144 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0131;AVGPOST=0.9998;RSQ=0.9937;ERATE=0.0003;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 25412150 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0168;AVGPOST=0.9985;RSQ=0.9727;ERATE=0.0003;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 25412200 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8170;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25412336 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25412396 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0041;AVGPOST=0.9989;RSQ=0.8923;ERATE=0.0006;THETA=0.0011;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25412414 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.609;LDAF=0.0078;AVGPOST=0.9895;RSQ=0.5082;ERATE=0.0025;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25412429 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8880;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25412507 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1260;AVGPOST=0.9988;RSQ=0.9952;ERATE=0.0005;THETA=0.0003;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 25412637 . TCA T 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4555;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25412751 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5858;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25412752 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9382;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 25412760 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.6302;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25412826 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5255;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25412876 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9244;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25413005 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8176;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25413026 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.7001;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25413130 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7275;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25413171 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0586;AVGPOST=0.9989;RSQ=0.9927;ERATE=0.0003;THETA=0.0003;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 25413237 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.795;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.7862;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25413255 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25413277 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0132;AVGPOST=0.9995;RSQ=0.9829;ERATE=0.0004;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 25413279 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6850;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25413294 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5827;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25413423 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.953;LDAF=0.0157;AVGPOST=0.9983;RSQ=0.9599;ERATE=0.0003;THETA=0.0007;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 25413442 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0132;AVGPOST=0.9999;RSQ=0.9954;ERATE=0.0003;THETA=0.0014;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 25413466 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.2038;AVGPOST=0.9984;RSQ=0.9963;ERATE=0.0003;THETA=0.0002;AC=447;AN=2184 GT:DS:GL:BD 0.20467032 0
1 25413490 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0133;AVGPOST=0.9997;RSQ=0.9908;ERATE=0.0003;THETA=0.0008;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 25413499 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0054;AVGPOST=0.9992;RSQ=0.9363;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25413500 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2427;AVGPOST=0.9971;RSQ=0.9936;ERATE=0.0003;THETA=0.0007;AC=528;AN=2184 GT:DS:GL:BD 0.24175824 0
1 25413520 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.928;LDAF=0.0130;AVGPOST=0.9982;RSQ=0.9342;ERATE=0.0005;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 25413537 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0068;AVGPOST=0.9992;RSQ=0.9510;ERATE=0.0004;THETA=0.0009;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 25413704 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6530;ERATE=0.0004;THETA=0.0068;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25413838 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0085;AVGPOST=0.9994;RSQ=0.9747;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 25413842 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.7354;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25413850 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7764;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25413964 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25413965 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.586;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5841;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25414027 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6695;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25414231 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6313;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25414278 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5800;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25414309 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0041;AVGPOST=0.9992;RSQ=0.9327;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25414323 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0017;AVGPOST=0.9986;RSQ=0.6746;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25414610 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8401;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25414700 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.743;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7439;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25414761 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0343;AVGPOST=0.9985;RSQ=0.9805;ERATE=0.0004;THETA=0.0031;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 25414822 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5900;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25414830 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0043;AVGPOST=0.9994;RSQ=0.9350;ERATE=0.0003;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 25414862 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0046;AVGPOST=0.9982;RSQ=0.8476;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25414975 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.807;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9101;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25415007 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.899;LDAF=0.0076;AVGPOST=0.9978;RSQ=0.8845;ERATE=0.0004;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 25415050 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.7850;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25415094 . TAGAC T 154 PASS INDEL;BAVGPOST=1.000;BRSQ=0.756;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4380;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25415102 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5994;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25415160 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.741;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4856;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25415182 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.952;LDAF=0.1160;AVGPOST=0.9888;RSQ=0.9627;ERATE=0.0008;THETA=0.0005;AC=254;AN=2184 GT:DS:GL:BD 0.11630037 0
1 25415183 . AG A 803 PASS INDEL;BAVGPOST=0.997;BRSQ=0.825;LDAF=0.0096;AVGPOST=0.9953;RSQ=0.7865;ERATE=0.0013;THETA=0.0021;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 25415259 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0129;AVGPOST=0.9996;RSQ=0.9879;ERATE=0.0003;THETA=0.0046;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 25415288 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25415363 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0038;AVGPOST=0.9989;RSQ=0.8875;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 25415389 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9721;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25415458 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25415465 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25415479 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8442;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25415503 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.8983;AVGPOST=0.9992;RSQ=0.9966;ERATE=0.0003;THETA=0.0003;AC=1963;AN=2184 GT:DS:GL:BD 0.89880955 1
1 25415511 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9545;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25415523 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.5870;AVGPOST=0.9945;RSQ=0.9920;ERATE=0.0005;THETA=0.0011;AC=1285;AN=2184 GT:DS:GL:BD 0.58836997 1
1 25415583 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.986;LDAF=0.2264;AVGPOST=0.9922;RSQ=0.9840;ERATE=0.0004;THETA=0.0006;AC=497;AN=2184 GT:DS:GL:BD 0.22756410 0
1 25415669 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25415682 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.8974;AVGPOST=0.9979;RSQ=0.9913;ERATE=0.0006;THETA=0.0018;AC=1962;AN=2184 GT:DS:GL:BD 0.89835167 1
1 25415780 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.8977;AVGPOST=0.9987;RSQ=0.9944;ERATE=0.0003;THETA=0.0021;AC=1962;AN=2184 GT:DS:GL:BD 0.89835167 1
1 25415799 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9201;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25415800 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0093;AVGPOST=0.9997;RSQ=0.9857;ERATE=0.0004;THETA=0.0053;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 25415820 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5663;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25415874 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.822;LDAF=0.0031;AVGPOST=0.9983;RSQ=0.7940;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25415978 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25416083 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.980;LDAF=0.1411;AVGPOST=0.9934;RSQ=0.9790;ERATE=0.0005;THETA=0.0044;AC=306;AN=2184 GT:DS:GL:BD 0.14010990 0
1 25416134 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0022;AVGPOST=0.9997;RSQ=0.9508;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25416144 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.743;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7233;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25416218 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.799;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25416316 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5320;ERATE=0.0004;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25416328 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.8961;ERATE=0.0003;THETA=0.0033;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 25416408 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7181;ERATE=0.0004;THETA=0.0023;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25416432 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.692;LDAF=0.0018;AVGPOST=0.9980;RSQ=0.5793;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25416755 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.787;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.5865;ERATE=0.0005;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 25416865 rs2370231 G GC 1939 PASS INDEL;BAVGPOST=0.963;BRSQ=0.860;LDAF=0.1783;AVGPOST=0.9217;RSQ=0.7987;ERATE=0.0031;THETA=0.0006;AC=353;AN=2184 GT:DS:GL:BD 0.16163003 0
1 25417032 rs55948656 AC A 18744 PASS INDEL;BAVGPOST=0.983;BRSQ=0.973;LDAF=0.2638;AVGPOST=0.9874;RSQ=0.9756;ERATE=0.0006;THETA=0.0007;AC=573;AN=2184 GT:DS:GL:BD 0.26236263 0
1 25417043 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4915;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 25417143 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9543;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 25417209 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 25417304 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9335;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 25417313 . AG A 41 PASS INDEL;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8405;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 25417354 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0050;AVGPOST=0.9986;RSQ=0.9026;ERATE=0.0005;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 25417359 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.985;LDAF=0.1133;AVGPOST=0.9963;RSQ=0.9862;ERATE=0.0003;THETA=0.0004;AC=248;AN=2184 GT:DS:GL:BD 0.11355311 0